template.mustache

FROM bids/base_validator

# Update system
RUN apt-get -qq update -qq && \
    apt-get -qq install -qq -y --no-install-recommends \
        unzip \
        xorg \
        wget && \
    apt-get clean && \
    rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*

# Install MATLAB MCR
ENV MATLAB_VERSION {{ MATLAB_VERSION }}
RUN mkdir /opt/mcr_install && \
    mkdir /opt/mcr && \
    wget --quiet -P /opt/mcr_install {{ MCR_LINK }} && \
    unzip -q /opt/mcr_install/*${MATLAB_VERSION}*.zip -d /opt/mcr_install && \
    cd /opt/mcr_install && mkdir save && \
{{#core_only}}
    for f in $(grep -E '(xml|enc)$' productdata/1000.txt) ; do  cp --parents archives/$f save/ ; done && \
    for f in $(grep -E '(xml|enc)$' productdata/35000.txt) ; do  cp --parents archives/$f save/ ; done && \
    for f in $(grep -E '(xml|enc)$' productdata/35010.txt) ; do  cp --parents archives/$f save/ ; done && \
    rm -rf archives && mv save/archives . && rmdir save && \
{{/core_only}}
    /opt/mcr_install/install -destinationFolder /opt/mcr -agreeToLicense yes -mode silent && \
{{#core_only}}
    rm -rf /opt/mcr/*/cefclient && \
    rm -rf /opt/mcr/*/mcr/toolbox/matlab/maps && \
    rm -rf /opt/mcr/*/java/jarext && \
    rm -rf /opt/mcr/*/toolbox/matlab/system/editor && \
    rm -rf /opt/mcr/*/toolbox/matlab/codetools && \
    rm -rf /opt/mcr/*/toolbox/matlab/datatools && \
    rm -rf /opt/mcr/*/toolbox/matlab/codeanalysis && \
    rm -rf /opt/mcr/*/toolbox/shared/dastudio && \
    rm -rf /opt/mcr/*/toolbox/shared/mlreportgen && \
    rm -rf /opt/mcr/*/sys/java/jre/glnxa64/jre/lib/ext/jfxrt.jar && \
    rm -rf /opt/mcr/*/sys/java/jre/glnxa64/jre/lib/amd64/libjfxwebkit.so && \
    rm -rf /opt/mcr/*/bin/glnxa64/libQt* && \
    rm -rf /opt/mcr/*/bin/glnxa64/qtwebengine && \
    rm -rf /opt/mcr/*/bin/glnxa64/cef_resources && \
{{/core_only}}
    rm -rf /opt/mcr_install /tmp/*

# Configure environment
ENV MCR_VERSION {{ MCR_VERSION }}
ENV LD_LIBRARY_PATH /opt/mcr/${MCR_VERSION}/runtime/glnxa64:/opt/mcr/${MCR_VERSION}/bin/glnxa64:/opt/mcr/${MCR_VERSION}/sys/os/glnxa64:/opt/mcr/${MCR_VERSION}/sys/opengl/lib/glnxa64
ENV MCR_INHIBIT_CTF_LOCK 1
ENV MCR_HOME /opt/mcr/${MCR_VERSION}