From 9c81b170f5d6589c0367f79e3b7625e325a8a724 Mon Sep 17 00:00:00 2001 From: julianguyn <89696558+julianguyn@users.noreply.github.com> Date: Wed, 27 Nov 2024 10:54:34 -0500 Subject: [PATCH] feat: add presentation tools and database (#108) * feat: resources for presentations * feat: list more resources * feat: list presentations and tools * fix: update docs/General/Presentations/index.md Co-authored-by: mtran * fix: typo changes Co-authored-by: mtran * fix: typo changes Co-authored-by: mtran * style: markdown subheadings Co-authored-by: mtran * fix: typo Co-authored-by: mtran * fix: remove login request * style: minor whitespace fixes --------- Co-authored-by: mtran --- docs/General/Presentations/database.md | 38 ++++++++++++++++++++++ docs/General/Presentations/index.md | 38 ++++++++++++++++++++-- docs/General/Presentations/tools.md | 44 +++++++++++++++++++++----- 3 files changed, 110 insertions(+), 10 deletions(-) create mode 100644 docs/General/Presentations/database.md diff --git a/docs/General/Presentations/database.md b/docs/General/Presentations/database.md new file mode 100644 index 00000000..f179f442 --- /dev/null +++ b/docs/General/Presentations/database.md @@ -0,0 +1,38 @@ +# Presentations Database + +This page contains links to previously created presentations and is intended to support the creation of future presentations. + +## 2024 Presentations + +**Radiomics and Pharmacogenomics: From Research To Clinic** ([Slide Deck](https://docs.google.com/presentation/d/1opViHXEd1PjO7glqesinhdQfJUf4_HUQ6F-uol_hCrA/edit#slide=id.gc3323ced22_0_0)) + +   *Joint Symposium in Cancer Biology and Ecosystem, October 2024* + +**Pharmacogenomics Data Analysis** ([Slide Decks](https://drive.google.com/drive/folders/1TO5YAc3wJpZWoMdR1EISqGa5CWyb53rm?usp=drive_link)) + +   *Canadian Bioinformatics Workshop, October 2024* + +**An Open Science Approach to Computational Pharmacogenomics** ([Slide Deck](https://docs.google.com/presentation/d/1mR4wYLbbRcaz6ZVBCZyXhtMnvn-XDBcuL1L_PB_TmeQ/edit?usp=sharing)) + +   *RECOMB/ISCB Regulatory & Systems Genomics/DREAM conference, October 2024* + +**An Open Science Approach to Drug Response Prediction in Sarcoma** ([Slide Deck](https://docs.google.com/presentation/d/15n0wnM5_33EJBr5580JchIyt_bZB6BeRwEtpJVe2RHI/edit#slide=id.gc3323ced22_0_0)) + +   *2024 NLMSF-SPAGN International LMS Research Roundtable, September 2024* + +**Development of Chromatin Accessibility Liquid Biopsy Biomarkers for Breast Cancer Drug Response Prediction** +([Slide Deck](https://docs.google.com/presentation/d/16fTvMb6qgN3fL1nlzBLlS8HnQdWB1XBTWpckxBjFAcc/edit?usp=sharing)) + +   *2024 Collaborative Breast Research Internal Award, June 2024* + +**Hallmarks of Drug Response Models: A Qualitative Framework to Evaluate Multivariable Predictive Biomarkers** ([Slide Deck](https://docs.google.com/presentation/d/12_qdW8u5jGVSvAJ22-kaorGUlcPN6C44-HTWMG4Lh-w/edit#slide=id.p1)) + +   *AACR Annual Meeting - San Diego, April 2024* + +**AI for Clinical Trials** ([Slide Deck](https://docs.google.com/presentation/d/18R2ZfBfW_gfx0Yti3GB5J46vKVGOh5HIfiN-iTQ_hk4/edit#slide=id.gc3323ced22_0_0)) + +   *Amplitude, April 2024* + +## Previous Presentations + +For presentations from 2023 and before, please visit the [BHKLab website](https://bhklab.ca/#presentations) diff --git a/docs/General/Presentations/index.md b/docs/General/Presentations/index.md index 705ef480..58978fea 100644 --- a/docs/General/Presentations/index.md +++ b/docs/General/Presentations/index.md @@ -1,7 +1,41 @@ # Presentation Standards -TODO: #35 Add Presentation Standards +## Talk Standards + +### Key Slides + +- **Title slide**: Include your name, date, affiliation, event/conference, and contact information (e.g. email). Optional: include the BHK Lab logo and others (e.g. UHN, University of Toronto, etc) +- **Acknowledgements slide**: Include names of lab members (or can reference 'BHK Lab') and other collaborators along with your institutional affilications/funding sources (e.g. UHN, CIHR, NSERC) + +### Other slides + +- All slides should include slide numbers +- Slide headings should be short (1-2 lines max) and descriptive +- Use visuals whenever possible (feel free to take from existing presentations in the [database](database.md)) ## Poster Standards -## Talk Standards +### Components + +- **Heading**: Include title, author(s) name, supervisor name (if student poster) across the top border +- **Abstract** (optional): Brief paragraph (~250 words) outlining purpose, methods, results, and conclusions +- **Introduction**: Background information pertinent to your project to help audience understand motivation. Outline the goal, objective(s), and hypothesis(es) of your research. +- **Materials and Methods**: Brief outline of materials and methods used in your work, listed clearly and logically. +- **Results**: Present data in photographic, graphical, or tabular form. Include descriptive figure titles and avoid lengthy captions. Be sure to not include abbreviations not explained in the text. +- **Discussion**: Address results and describe relevance to objective(s) and hypothesis(es). +- **Conclusions**: Stated clearly and concisely, addressing project objectives and stating overall significance. +- **References**: All references (publications) +- **Acknowledgements**: Any key lab members, collaborators, and funding sources. + +### Text Sizing + +Size of lettering must be large enough to be legible from approximately 2m. Use a clear and simple font between 18 point and 30 point in size. We recommend the following for Arial: + +- 18 point: best viewed at 1m (for figure titles, legends, acknowledgements, etc) +- 24 point: best viewed at 2m (for main text) +- 30 point: best viewed at 3m (for section headings) + +### Suggestions + +- Avoid overloading with text, use bullet points where possible +- Whenever appropriate, use clear diagrams, figures, and tables (e.g. materials and methods) diff --git a/docs/General/Presentations/tools.md b/docs/General/Presentations/tools.md index a409feae..0113726a 100644 --- a/docs/General/Presentations/tools.md +++ b/docs/General/Presentations/tools.md @@ -1,10 +1,38 @@ # Presentation Tools -TODO: Add descriptions of presentation tools - -- Google Sheets -- Templates -- Miro -- Flaticon -- Biorender -- Slido +This page describes standards, tools, and resources for creating presentations for the lab. + +**Google Sheets** + +All external presentations (conferences, workshops, external working groups), should be created on Google Sheets directly by or shared to the `bhklab.research@gmail.com` account. + +Internal presentations, such as journal clubs, should also be created on Google Sheets. *Link Lab Meeting and Journal Club pages here. + + +**Templates** + +Several slide templates have already been developed for the lab: + +- [BHKLab Internal Presentations Template](https://docs.google.com/presentation/d/1GRdR3ExBVbXwgmjkHBp82i3x_mdQZPzJNHsEz1LiYWk/edit) +- [BHKLab External Presentations Template](https://docs.google.com/presentation/d/1B-iTfzHvVSOD9fW80NZz14ct6HENHWOgTxU8C673TmY/edit) + + + +**Miro** + +[Miro](https://miro.com/login/) is a collaborative white board platform that enables simple diagram and multi-figure panel creation for presentations and/or manuscripts. For diagrams that will be used and updated by others in the lab, please request a Miro Board be created via the BHK Lab Miro account. + + +**Images and Icons** + +The following are open-source biological imaging databases and platforms. The BHK Lab holds a premium Flaticon account. If Biorender and/or BioArt are used, please remember to add them to the acknowledgements. + +- [Flaticon](https://www.flaticon.com/) +- [Biorender](https://www.biorender.com/) +- [BioArt](https://bioart.niaid.nih.gov/) + + + +**Slido** + +[Slido](https://www.slido.com/) is an interactive polling platform that can be easily integrated into Google Sheets. We recommend using this platform to improve engagement in presentations, particularly workshops or other relevant use cases.