feat: add presentation tools and database (#108)

* feat: resources for presentations

* feat: list more resources

* feat: list presentations and tools

* fix: update docs/General/Presentations/index.md

Co-authored-by: mtran <[email protected]>

* fix: typo changes

Co-authored-by: mtran <[email protected]>

* fix: typo changes

Co-authored-by: mtran <[email protected]>

* style: markdown subheadings

Co-authored-by: mtran <[email protected]>

* fix: typo

Co-authored-by: mtran <[email protected]>

* fix: remove login request

* style: minor whitespace fixes

---------

Co-authored-by: mtran <[email protected]>

docs/General/Presentations/database.md

@@ -0,0 +1,38 @@
+# Presentations Database
+
+This page contains links to previously created presentations and is intended to support the creation of future presentations.
+
+## 2024 Presentations
+
+**Radiomics and Pharmacogenomics: From Research To Clinic** ([Slide Deck](https://docs.google.com/presentation/d/1opViHXEd1PjO7glqesinhdQfJUf4_HUQ6F-uol_hCrA/edit#slide=id.gc3323ced22_0_0))
+
+   *Joint Symposium in Cancer Biology and Ecosystem, October 2024*
+
+**Pharmacogenomics Data Analysis** ([Slide Decks](https://drive.google.com/drive/folders/1TO5YAc3wJpZWoMdR1EISqGa5CWyb53rm?usp=drive_link))
+
+   *Canadian Bioinformatics Workshop, October 2024*
+
+**An Open Science Approach to Computational Pharmacogenomics** ([Slide Deck](https://docs.google.com/presentation/d/1mR4wYLbbRcaz6ZVBCZyXhtMnvn-XDBcuL1L_PB_TmeQ/edit?usp=sharing))
+
+   *RECOMB/ISCB Regulatory & Systems Genomics/DREAM conference, October 2024*
+
+**An Open Science Approach to Drug Response Prediction in Sarcoma** ([Slide Deck](https://docs.google.com/presentation/d/15n0wnM5_33EJBr5580JchIyt_bZB6BeRwEtpJVe2RHI/edit#slide=id.gc3323ced22_0_0))
+
+   *2024 NLMSF-SPAGN International LMS Research Roundtable, September 2024*
+
+**Development of Chromatin Accessibility Liquid Biopsy Biomarkers for Breast Cancer Drug Response Prediction**
+([Slide Deck](https://docs.google.com/presentation/d/16fTvMb6qgN3fL1nlzBLlS8HnQdWB1XBTWpckxBjFAcc/edit?usp=sharing))
+
+   *2024 Collaborative Breast Research Internal Award, June 2024*
+
+**Hallmarks of Drug Response Models: A Qualitative Framework to Evaluate Multivariable Predictive Biomarkers** ([Slide Deck](https://docs.google.com/presentation/d/12_qdW8u5jGVSvAJ22-kaorGUlcPN6C44-HTWMG4Lh-w/edit#slide=id.p1))
+
+   *AACR Annual Meeting - San Diego, April 2024*
+
+**AI for Clinical Trials** ([Slide Deck](https://docs.google.com/presentation/d/18R2ZfBfW_gfx0Yti3GB5J46vKVGOh5HIfiN-iTQ_hk4/edit#slide=id.gc3323ced22_0_0))
+
+   *Amplitude, April 2024*
+
+## Previous Presentations
+
+For presentations from 2023 and before, please visit the [BHKLab website](https://bhklab.ca/#presentations)

docs/General/Presentations/index.md

@@ -1,7 +1,41 @@
 # Presentation Standards
 
-TODO: #35 Add Presentation Standards
+## Talk Standards
+
+### Key Slides
+
+- **Title slide**: Include your name, date, affiliation, event/conference, and contact information (e.g. email). Optional: include the BHK Lab logo and others (e.g. UHN, University of Toronto, etc)
+- **Acknowledgements slide**: Include names of lab members (or can reference 'BHK Lab') and other collaborators along with your institutional affilications/funding sources (e.g. UHN, CIHR, NSERC)
+
+### Other slides
+
+- All slides should include slide numbers
+- Slide headings should be short (1-2 lines max) and descriptive
+- Use visuals whenever possible (feel free to take from existing presentations in the [database](database.md))
 
 ## Poster Standards
 
-## Talk Standards
+### Components
+
+- **Heading**: Include title, author(s) name, supervisor name (if student poster) across the top border
+- **Abstract** (optional): Brief paragraph (~250 words) outlining purpose, methods, results, and conclusions
+- **Introduction**: Background information pertinent to your project to help audience understand motivation. Outline the goal, objective(s), and hypothesis(es) of your research.
+- **Materials and Methods**: Brief outline of materials and methods used in your work, listed clearly and logically.
+- **Results**: Present data in photographic, graphical, or tabular form. Include descriptive figure titles and avoid lengthy captions. Be sure to not include abbreviations not explained in the text.
+- **Discussion**: Address results and describe relevance to objective(s) and hypothesis(es).
+- **Conclusions**: Stated clearly and concisely, addressing project objectives and stating overall significance.
+- **References**: All references (publications)
+- **Acknowledgements**: Any key lab members, collaborators, and funding sources.
+
+### Text Sizing
+
+Size of lettering must be large enough to be legible from approximately 2m. Use a clear and simple font between 18 point and 30 point in size. We recommend the following for Arial:
+
+- 18 point: best viewed at 1m (for figure titles, legends, acknowledgements, etc)
+- 24 point: best viewed at 2m (for main text)
+- 30 point: best viewed at 3m (for section headings)
+
+### Suggestions
+
+- Avoid overloading with text, use bullet points where possible
+- Whenever appropriate, use clear diagrams, figures, and tables (e.g. materials and methods)

docs/General/Presentations/tools.md

@@ -1,10 +1,38 @@
 # Presentation Tools
 
-TODO: Add descriptions of presentation tools
-
-- Google Sheets
-- Templates
-- Miro
-- Flaticon
-- Biorender
-- Slido
+This page describes standards, tools, and resources for creating presentations for the lab.
+
+**Google Sheets**
+
+All external presentations (conferences, workshops, external working groups), should be created on Google Sheets directly by or shared to the `[email protected]` account.
+
+Internal presentations, such as journal clubs, should also be created on Google Sheets. *Link Lab Meeting and Journal Club pages here.
+
+
+**Templates**
+
+Several slide templates have already been developed for the lab: 
+
+- [BHKLab Internal Presentations Template](https://docs.google.com/presentation/d/1GRdR3ExBVbXwgmjkHBp82i3x_mdQZPzJNHsEz1LiYWk/edit)
+- [BHKLab External Presentations Template](https://docs.google.com/presentation/d/1B-iTfzHvVSOD9fW80NZz14ct6HENHWOgTxU8C673TmY/edit)
+
+
+
+**Miro**
+
+[Miro](https://miro.com/login/) is a collaborative white board platform that enables simple diagram and multi-figure panel creation for presentations and/or manuscripts. For diagrams that will be used and updated by others in the lab, please request a Miro Board be created via the BHK Lab Miro account.
+
+
+**Images and Icons**
+
+The following are open-source biological imaging databases and platforms. The BHK Lab holds a premium Flaticon account. If Biorender and/or BioArt are used, please remember to add them to the acknowledgements.
+
+- [Flaticon](https://www.flaticon.com/)
+- [Biorender](https://www.biorender.com/)
+- [BioArt](https://bioart.niaid.nih.gov/)
+
+
+
+**Slido**
+
+[Slido](https://www.slido.com/) is an interactive polling platform that can be easily integrated into Google Sheets. We recommend using this platform to improve engagement in presentations, particularly workshops or other relevant use cases.