R CMD check found WARNINGs

Process completed with exit code 1.

package or namespace load failed for 'biomaRt' in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):

Build process failed

Process completed with exit code 1.

package or namespace load failed for ‘biomaRt’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):

Build process failed

Process completed with exit code 1.

package or namespace load failed for ‘openssl’ in dyn.load(file, DLLpath = DLLpath, ...):

loading failed

Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/

Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/

Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/

Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)

Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 35 at (1)

r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.

r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.

The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/

Found the following significant warnings:

No files were found with the provided path: check. No artifacts will be uploaded.

r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.

The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/

r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

No files were found with the provided path: check. No artifacts will be uploaded.

r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.

r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.

pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf