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pima.yml
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name: pima
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_gnu
- _r-mutex=1.0.1=anacondar_1
- _tflow_select=2.3.0=mkl
- absl-py=1.0.0=pyhd8ed1ab_0
- aiohttp=3.8.1=py38h497a2fe_0
- aiosignal=1.2.0=pyhd8ed1ab_0
- alsa-lib=1.1.5=h516909a_1002
- astor=0.8.1=pyh9f0ad1d_0
- astunparse=1.6.3=pyhd8ed1ab_0
- async-timeout=4.0.1=pyhd8ed1ab_0
- attrs=21.2.0=pyhd8ed1ab_0
- bcftools=1.12=h45bccc9_1
- bedtools=2.30.0=h7d7f7ad_2
- binutils_impl_linux-64=2.36.1=h193b22a_2
- binutils_linux-64=2.36=hf3e587d_1
- biopython=1.79=py38h497a2fe_1
- blast=2.12.0=hf3cf87c_4
- blinker=1.4=py_1
- brotli-bin=1.0.9=h7f98852_6
- brotlipy=0.7.0=py38h497a2fe_1003
- bwa=0.7.17=h5bf99c6_8
- bwidget=1.9.14=ha770c72_1
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- ca-certificates=2022.6.15=ha878542_0
- cachetools=4.2.4=pyhd8ed1ab_0
- cairo=1.16.0=h6cf1ce9_1008
- certifi=2022.6.15=py38h578d9bd_0
- cffi=1.15.0=py38h3931269_0
- charset-normalizer=2.0.8=pyhd8ed1ab_0
- circos=0.69.8=hdfd78af_1
- click=8.0.3=py38h578d9bd_1
- colorama=0.4.4=pyh9f0ad1d_0
- conda=4.11.0=py38h578d9bd_0
- conda-content-trust=0.1.1=pyhd3eb1b0_0
- conda-package-handling=1.7.3=py38h497a2fe_1
- cryptography=36.0.0=py38h3e25421_0
- curl=7.83.1=h7bff187_0
- cycler=0.11.0=pyhd8ed1ab_0
- dataclasses=0.8=pyhc8e2a94_3
- dill=0.3.4=pyhd8ed1ab_0
- entrez-direct=16.2=he881be0_0
- expat=2.4.1=h9c3ff4c_0
- flye=2.9=py38h69e0bdc_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.13.1=hba837de_1005
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- fonttools=4.28.3=py38h497a2fe_0
- freetype=2.10.4=h0708190_1
- fribidi=1.0.10=h36c2ea0_0
- frozenlist=1.2.0=py38h497a2fe_1
- gast=0.3.3=py_0
- gcc_impl_linux-64=9.4.0=h03d3576_11
- gcc_linux-64=9.4.0=h391b98a_1
- gettext=0.19.8.1=h73d1719_1008
- gfortran_impl_linux-64=9.4.0=h0003116_11
- gfortran_linux-64=9.4.0=hf0ab688_1
- giflib=5.2.1=h36c2ea0_2
- glimmerhmm=3.0.4=h2d50403_2
- google-auth=2.3.3=pyh6c4a22f_0
- google-auth-oauthlib=0.4.6=pyhd8ed1ab_0
- google-pasta=0.2.0=pyh8c360ce_0
- graphite2=1.3.13=h58526e2_1001
- grpcio=1.42.0=py38hdd6454d_0
- gsl=2.6=he838d99_2
- gxx_impl_linux-64=9.4.0=h03d3576_11
- gxx_linux-64=9.4.0=h0316aca_1
- h5py=2.10.0=nompi_py38h9915d05_106
- harfbuzz=3.1.1=h83ec7ef_0
- hdf5=1.10.6=nompi_h6a2412b_1114
- htslib=1.12=h9093b5e_1
- icu=68.2=h9c3ff4c_0
- idna=3.1=pyhd3deb0d_0
- importlib-metadata=4.8.2=py38h578d9bd_0
- intervaltree=3.0.2=py_0
- isa-l=2.30.0=ha770c72_4
- jbig=2.1=h7f98852_2003
- joblib=1.1.0=pyhd8ed1ab_0
- jpeg=9d=h36c2ea0_0
- k8=0.2.5=h9a82719_1
- keras-preprocessing=1.1.2=pyhd8ed1ab_0
- kernel-headers_linux-64=2.6.32=he073ed8_15
- keyutils=1.6.1=h166bdaf_0
- kiwisolver=1.3.2=py38h1fd1430_1
- kraken2=2.1.2=pl5321h9f5acd7_2
- krb5=1.19.3=h3790be6_0
- lcms2=2.12=hddcbb42_0
- ld_impl_linux-64=2.36.1=hea4e1c9_2
- lerc=2.2.1=h9c3ff4c_0
- libarchive=3.5.2=hccf745f_1
- libblas=3.9.0=12_linux64_openblas
- libbrotlicommon=1.0.9=h7f98852_6
- libbrotlidec=1.0.9=h7f98852_6
- libbrotlienc=1.0.9=h7f98852_6
- libcblas=3.9.0=12_linux64_openblas
- libcurl=7.83.1=h7bff187_0
- libdeflate=1.7=h7f98852_5
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.4.2=h7f98852_5
- libgcc-devel_linux-64=9.4.0=hd854feb_11
- libgcc-ng=12.1.0=h8d9b700_16
- libgd=2.3.3=h6ad9fb6_0
- libgfortran-ng=11.2.0=h69a702a_11
- libgfortran5=11.2.0=h5c6108e_11
- libglib=2.70.1=h174f98d_0
- libgomp=12.1.0=h8d9b700_16
- libiconv=1.16=h516909a_0
- libidn2=2.3.2=h7f98852_0
- liblapack=3.9.0=12_linux64_openblas
- libmamba=0.19.0=h3985d26_0
- libmambapy=0.19.0=py38h908000c_0
- libnghttp2=1.47.0=h727a467_0
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.18=pthreads_h8fe5266_0
- libpng=1.6.37=h21135ba_2
- libprotobuf=3.19.1=h780b84a_0
- libsanitizer=9.4.0=h79bfe98_11
- libsolv=0.7.19=h780b84a_5
- libssh2=1.10.0=ha56f1ee_2
- libstdcxx-devel_linux-64=9.4.0=hd854feb_11
- libstdcxx-ng=12.1.0=ha89aaad_16
- libtiff=4.3.0=hf544144_1
- libunistring=0.9.10=h7f98852_0
- libuuid=2.32.1=h7f98852_1000
- libwebp=1.2.1=h3452ae3_0
- libwebp-base=1.2.1=h7f98852_0
- libxcb=1.13=h7f98852_1004
- libxml2=2.9.12=h72842e0_0
- libzlib=1.2.12=h166bdaf_1
- lz4-c=1.9.3=h9c3ff4c_1
- lzo=2.10=h516909a_1000
- make=4.3=hd18ef5c_1
- mamba=0.19.0=py38h1abaa86_0
- mappy=2.23=py38h390ddb8_0
- markdown=3.3.6=pyhd8ed1ab_0
- matplotlib-base=3.5.0=py38hf4fb855_0
- medaka=1.4.3=py38h130def0_0
- minimap2=2.23=h5bf99c6_0
- multidict=5.2.0=py38h497a2fe_1
- multiprocess=0.70.12.2=py38h497a2fe_1
- mummer=3.23=pl5321h1b792b2_13
- munkres=1.1.4=pyh9f0ad1d_0
- ncurses=6.2=h58526e2_4
- networkx=2.6.3=pyhd8ed1ab_1
- numpy=1.19.5=py38h9894fe3_2
- oauthlib=3.1.1=pyhd8ed1ab_0
- olefile=0.46=pyh9f0ad1d_1
- ont-fast5-api=4.0.0=pyhdfd78af_0
- openjdk=11.0.1=h600c080_1018
- openjpeg=2.4.0=hb52868f_1
- openssl=1.1.1p=h166bdaf_0
- opt_einsum=3.3.0=pyhd8ed1ab_1
- ordered-set=4.0.2=py_0
- packaging=21.3=pyhd8ed1ab_0
- pandas=1.3.4=py38h43a58ef_1
- pandoc=2.18=ha770c72_0
- pango=1.48.10=h54213e6_2
- parasail-python=1.2.4=py38h8e3bb3f_1
- pathos=0.2.8=pyhd8ed1ab_0
- pbzip2=1.1.13=0
- pcre=8.45=h9c3ff4c_0
- pcre2=10.37=h032f7d1_0
- perl=5.32.1=2_h7f98852_perl5
- perl-archive-tar=2.40=pl5321hdfd78af_0
- perl-autoloader=5.74=pl5321hdfd78af_3
- perl-carp=1.50=pl5321hd8ed1ab_0
- perl-clone=0.42=pl5321hec16e2b_2
- perl-common-sense=3.75=pl5321hdfd78af_0
- perl-compress-raw-bzip2=2.103=pl5321h87f3376_0
- perl-compress-raw-zlib=2.105=pl5321h87f3376_0
- perl-config-general=2.65=pl5321hdfd78af_0
- perl-digest-perl-md5=1.9=pl5321hdfd78af_2
- perl-dynaloader=1.25=pl5321hdfd78af_2
- perl-encode=3.18=pl5321hec16e2b_0
- perl-exporter=5.74=pl5321hd8ed1ab_0
- perl-exporter-tiny=1.002002=pl5321hdfd78af_0
- perl-extutils-makemaker=7.64=pl5321hd8ed1ab_0
- perl-font-ttf=1.06=pl5321hdfd78af_1
- perl-gd=2.76=pl5321h5b5514e_1
- perl-io-compress=2.106=pl5321h87f3376_0
- perl-io-string=1.08=pl5321hdfd78af_4
- perl-io-zlib=1.11=pl5321hdfd78af_0
- perl-json=4.07=pl5321hdfd78af_0
- perl-json-xs=2.34=pl5321h9f5acd7_5
- perl-list-moreutils=0.430=pl5321hdfd78af_0
- perl-list-moreutils-xs=0.430=pl5321hec16e2b_1
- perl-math-bezier=0.01=pl5321hdfd78af_2
- perl-math-round=0.07=pl5321hdfd78af_2
- perl-math-vecstat=0.08=pl5321hdfd78af_2
- perl-module-implementation=0.09=pl5321hdfd78af_3
- perl-module-runtime=0.016=pl5321hdfd78af_2
- perl-number-format=1.75=pl5321hdfd78af_4
- perl-params-validate=1.30=pl5321hec16e2b_1
- perl-parent=0.238=pl5321hd8ed1ab_0
- perl-pathtools=3.75=pl5321hec16e2b_3
- perl-readonly=2.05=pl5321hdfd78af_1
- perl-regexp-common=2017060201=pl5321hdfd78af_1
- perl-scalar-list-utils=1.62=pl5321hec16e2b_0
- perl-set-intspan=1.19=pl5321hdfd78af_2
- perl-statistics-basic=1.6611=pl5321hdfd78af_3
- perl-svg=2.87=pl5321hdfd78af_0
- perl-text-format=0.62=pl5321hdfd78af_0
- perl-time-hires=1.9764=pl5321hec16e2b_2
- perl-try-tiny=0.31=pl5321hdfd78af_0
- perl-types-serialiser=1.01=pl5321hdfd78af_0
- perl-xml-parser=2.44_01=pl5321hc3e0081_1003
- perl-xsloader=0.24=pl5321hd8ed1ab_0
- pigz=2.6=h27826a3_0
- pillow=8.4.0=py38h8e6f84c_0
- pip=21.3.1=pyhd8ed1ab_0
- pixman=0.40.0=h36c2ea0_0
- popt=1.16=h0b475e3_2002
- pox=0.3.0=pyhd8ed1ab_0
- ppft=1.6.6.4=pyhd8ed1ab_0
- progressbar33=2.4=py_0
- protobuf=3.19.1=py38h709712a_1
- pthread-stubs=0.4=h36c2ea0_1001
- pyasn1=0.4.8=py_0
- pyasn1-modules=0.2.7=py_0
- pybind11-abi=4=hd8ed1ab_3
- pycosat=0.6.3=py38h497a2fe_1009
- pycparser=2.21=pyhd8ed1ab_0
- pyfaidx=0.6.3.1=pyh5e36f6f_0
- pyjwt=2.0.1=pyhd8ed1ab_0
- pylatex=1.4.1=pyh9f0ad1d_0
- pyopenssl=21.0.0=pyhd8ed1ab_0
- pyparsing=3.0.6=pyhd8ed1ab_0
- pysam=0.17.0=py38hf7546f9_0
- pysocks=1.7.1=py38h578d9bd_4
- pyspoa=0.0.3=py38hc37a69a_2
- python=3.8.12=hb7a2778_2_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python-edlib=1.3.9=py38h8c62d01_0
- python-isal=0.11.1=py38h497a2fe_1
- python_abi=3.8=2_cp38
- pytz=2021.3=pyhd8ed1ab_0
- pyu2f=0.1.5=pyhd8ed1ab_0
- pyyaml=6.0=py38h497a2fe_3
- qcat=1.1.0=pyh864c0ab_1
- r=4.1=r41hd8ed1ab_1004
- r-base=4.1.1=hb67fd72_0
- r-boot=1.3_28=r41hc72bb7e_0
- r-class=7.3_19=r41hcfec24a_0
- r-cluster=2.1.2=r41h859d828_0
- r-codetools=0.2_18=r41hc72bb7e_0
- r-foreign=0.8_81=r41hcfec24a_0
- r-kernsmooth=2.23_20=r41h742201e_0
- r-lattice=0.20_45=r41hcfec24a_0
- r-mass=7.3_54=r41hcfec24a_0
- r-matrix=1.3_4=r41he454529_0
- r-mgcv=1.8_38=r41he454529_0
- r-nlme=3.1_153=r41h859d828_0
- r-nnet=7.3_16=r41hcfec24a_0
- r-recommended=4.1=r41hd8ed1ab_1004
- r-rpart=4.1_15=r41hcfec24a_2
- r-spatial=7.3_14=r41hcfec24a_0
- r-survival=3.2_13=r41hcfec24a_0
- racon=1.4.20=h9a82719_1
- readline=8.1=h46c0cb4_0
- reproc=14.2.3=h7f98852_0
- reproc-cpp=14.2.3=h9c3ff4c_0
- requests=2.26.0=pyhd8ed1ab_1
- requests-oauthlib=1.3.0=pyh9f0ad1d_0
- rsa=4.8=pyhd8ed1ab_0
- rsync=3.2.3=hffa082f_3
- ruamel_yaml=0.15.80=py38h497a2fe_1006
- samtools=1.12=h9aed4be_1
- scipy=1.7.3=py38h56a6a73_0
- sed=4.8=he412f7d_0
- setuptools=59.4.0=py38h578d9bd_0
- simplejson=3.17.6=py38h0a891b7_1
- six=1.16.0=pyh6c4a22f_0
- sortedcontainers=2.4.0=pyhd8ed1ab_0
- sqlite=3.37.0=h9cd32fc_0
- sysroot_linux-64=2.12=he073ed8_15
- tar=1.34=ha1f6473_0
- tensorboard=2.7.0=pyhd8ed1ab_0
- tensorboard-data-server=0.6.0=py38h3e25421_1
- tensorboard-plugin-wit=1.8.0=pyh44b312d_0
- tensorflow=2.2.0=mkl_py38h6d3daf0_0
- tensorflow-base=2.2.0=mkl_py38h5059a2d_0
- tensorflow-estimator=2.6.0=py38h709712a_0
- termcolor=1.1.0=py_2
- tk=8.6.11=h27826a3_1
- tktable=2.10=hb7b940f_3
- tqdm=4.62.3=pyhd8ed1ab_0
- typing-extensions=4.0.1=hd8ed1ab_0
- typing_extensions=4.0.1=pyha770c72_0
- tzdata=2022a=hda174b7_0
- unicodedata2=13.0.0.post2=py38h497a2fe_4
- urllib3=1.26.7=pyhd8ed1ab_0
- varscan=2.4.4=hdfd78af_1
- werkzeug=2.0.1=pyhd8ed1ab_0
- wget=1.20.3=ha56f1ee_1
- whatshap=1.0=py38hed8969a_1
- wheel=0.37.0=pyhd8ed1ab_1
- wkhtmltopdf=0.12.4=1
- wrapt=1.13.3=py38h497a2fe_1
- xopen=1.2.1=py38h578d9bd_1
- xorg-fixesproto=5.0=h7f98852_1002
- xorg-inputproto=2.3.2=h7f98852_1002
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.7.2=h7f98852_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h7f98852_1
- xorg-libxfixes=5.0.3=h7f98852_1004
- xorg-libxi=1.7.10=h7f98852_0
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-libxt=1.2.1=h7f98852_2
- xorg-libxtst=1.2.3=h7f98852_1002
- xorg-recordproto=1.14.2=h7f98852_1002
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h7f98852_1002
- xorg-xproto=7.0.31=h7f98852_1007
- xxhash=0.8.0=h7f98852_3
- xz=5.2.5=h516909a_1
- yaml=0.2.5=h516909a_0
- yaml-cpp=0.6.3=he1b5a44_4
- yarl=1.7.2=py38h497a2fe_1
- zipp=3.6.0=pyhd8ed1ab_0
- zlib=1.2.12=h166bdaf_1
- zstd=1.5.0=ha95c52a_0
- pip:
- beautifulsoup4==4.10.0
- brotli==1.0.9
- cssselect2==0.6.0
- dna-features-viewer==3.1.0
- emoji==1.6.3
- gh-md-to-html==1.21.2
- html5lib==1.1
- mdutils==1.3.1
- mistune==2.0.0rc1
- pdfkit==1.0.0
- pydyf==0.2.0
- pygments==2.11.2
- pyphen==0.12.0
- quast==5.0.2
- shellescape==3.8.1
- si-prefix==1.2.2
- soupsieve==2.3.1
- tinycss2==1.1.1
- weasyprint==55.0
- webcolors==1.11.1
- webencodings==0.5.1
- zopfli==0.2.1
prefix: /home/miniconda