setup.py

#!/usr/bin/python
# coding=utf-8

'''
Created on Jul 9, 2012

@author: Allis Tauri <allista@gmail.com>
'''

# Utility function to read the README.md file.
# Used for the long_description.  It's nice, because now 1) we have a top level
# README.md file and 2) it's easier to type in the README.md file than to put a raw
# string in below ...
import os
def read(fname):
    return open(os.path.join(os.path.dirname(__file__), fname)).read()

from distutils.core import setup
setup(name='BioUtils',
      version='1.4',
      description='A utility library and a set of scripts for everyday bioinformatic routine.',
      long_description=read('README.md'),
      license='GPL-3',
      author='Allis Tauri',
      author_email='allista@gmail.com',
      url='https://github.com/allista/BioUtils',
      classifiers=[
        'Development Status :: 3 - Alpha',
        'Topic :: Scientific/Engineering :: Bio-Informatics',
        'Intended Audience :: Science/Research',
        'Operating System :: POSIX',
        'Programming Language :: Python'],
      python_requires="==2.7.18",
      packages=['BioUtils', 'BioUtils.HMMER3', 'BioUtils.KEGG', 'BioUtils.NCBI', 'BioUtils.Tools'],
      scripts=['seqconv',
               'align_as_amino',
               'gaps_encoder',
               'parse_chrom',
               'split_fasta',
               'alien2gb',
               'gbfix',
               'rename_genomes',
               'analyze_ec',
               'split_consensus',
               'nameconv',
               'assembly2sequence',
               'make_fasta_db',
               'build_fast_tree',
               'build_tree_of_homologues',
               'hmm_annotate_genomes',
               'blast_annotate_genomes',
               'clean_annotations',
               'find_clusters',
               'draw_clusters',
               'translate_seqs',
               'fetch_accessions',
               ],
      )