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DESCRIPTION
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Package: similaRpeak
Type: Package
Title: Metrics to estimate a level of similarity between two ChIP-Seq profiles
Version: 1.27.1
Date: 2014-08-08
Authors@R: c( person("Astrid","Deschênes",
email="[email protected]",
role=c("cre","aut")), person("Elsa", "Bernatchez",
email="[email protected]", role=c("aut")),
person("Charles", "Joly Beauparlant",
email="[email protected]",
role=c("aut")), person("Fabien Claude", "Lamaze",
email="[email protected]", role=c("aut")),
person("Rawane", "Samb", email="[email protected]",
role=c("aut")), person("Pascal", "Belleau",
email="[email protected]", role=c("aut")),
person("Arnaud", "Droit",
email="[email protected]", role=c("aut")))
Description: This package calculates metrics which quantify the level of
similarity between ChIP-Seq profiles. More specifically, the package
implements six pseudometrics specialized in pattern similarity detection
in ChIP-Seq profiles.
biocViews: BiologicalQuestion, ChIPSeq, Genetics, MultipleComparison,
DifferentialExpression
Depends:
R6 (>= 2.0)
Imports:
stats
Suggests:
RUnit,
BiocGenerics,
knitr,
Rsamtools,
GenomicAlignments,
rtracklayer,
rmarkdown,
BiocStyle
License: Artistic-2.0
URL: https://github.com/adeschen/similaRpeak
BugReports: https://github.com/adeschen/similaRpeak/issues
VignetteBuilder: knitr
Encoding: UTF-8
NeedsCompilation: no
RoxygenNote: 6.0.1