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Metagenomic Co Assembly Proof of Concept
Tomer Altman edited this page Jun 4, 2020
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Tomer, Connor, and Ryan set out to demonstrate that when you co-assemble read sets from many samples from a common source, you can recover more complete genomes, and genomes of rare members of the community. To this end, we fetched all runs of PRJNA602689
, which contains runs SRR10951656
and SRR10951660
; the "low coverage Infectious Bronchitis Virus in Sus scrofa" study.