From 6b2ce4382999d671951dfec61e0e09d8f22b36f9 Mon Sep 17 00:00:00 2001
From: Yuri05 <Yuri05@github.com>
Date: Mon, 19 Feb 2024 11:41:32 +0100
Subject: [PATCH] test update dev website

---
 .github/workflows/CreateGitHubPagesForR.yml | 82 +++++++++++++++++++++
 .github/workflows/update-dev-website.yml    |  2 +-
 2 files changed, 83 insertions(+), 1 deletion(-)
 create mode 100644 .github/workflows/CreateGitHubPagesForR.yml

diff --git a/.github/workflows/CreateGitHubPagesForR.yml b/.github/workflows/CreateGitHubPagesForR.yml
new file mode 100644
index 00000000..1821fc2a
--- /dev/null
+++ b/.github/workflows/CreateGitHubPagesForR.yml
@@ -0,0 +1,82 @@
+name: Create GitHub pages for an R package
+
+on: 
+  workflow_call:
+    inputs:
+      pkgdown_mode:
+        required: true
+        type: string
+        enum: ['devel', 'release']
+      extra_r_packages:
+        required: false
+        type: string
+      gh-pages-branch:
+        required: false
+        type: string
+        default: 'gh-pages'
+
+jobs:
+  build:
+    runs-on: windows-latest
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      PKGDOWN_MODE: ${{ inputs.pkgdown_mode }}
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+      - name: Setup
+        uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+      - name: Setup Pandoc
+        uses: r-lib/actions/setup-pandoc@v2
+      - name: Install required packages
+        uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: |
+            ${{ inputs.extra_r_packages }}
+            any::pkgdown
+            local::.
+          needs: website
+      - name: Remove build number from the DESCRIPTION and build site
+        run: |
+          description <- readLines('DESCRIPTION')
+          versionLine <- grep(pattern = 'Version: [0-9]\\.[0-9]\\.[0-9]', description)
+          description[versionLine] <- gsub(pattern = '\\.[0-9]$', replacement = '', description[versionLine])
+          writeLines(description, 'DESCRIPTION')
+          options(yaml.eval.expr=TRUE)
+          pkgdown::build_site(devel=TRUE, install=TRUE)
+        shell: Rscript {0}
+        # The project is then uploaded as an artifact named 'docs'.
+      - name: Upload Artifacts 
+        uses: actions/upload-artifact@v1
+        with:
+          name: docs
+          path: docs
+
+  deploy:
+    concurrency: ci-${{ github.ref }}
+    # The second job must depend on the first one to complete before running and uses ubuntu-latest instead of windows.
+    needs: [build] 
+    runs-on: ubuntu-latest
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+        # The built project is downloaded into the 'docs' folder.
+      - name: Download Artifacts 
+        uses: actions/download-artifact@v1
+        with:
+          name: docs
+      - name: Deploy
+        uses: JamesIves/github-pages-deploy-action@v4
+        # The deployment folder should match the name of the artifact.
+        # Clean is false to prevent removing release site
+        # only target folder of repo from gh-pages branch is updated
+        with:
+          folder: docs
+          clean: false
+          branch: ${{ inputs.gh-pages-branch }}
+          target-folder: docs
+          token: ${{ secrets.GITHUB_TOKEN }}
diff --git a/.github/workflows/update-dev-website.yml b/.github/workflows/update-dev-website.yml
index 34b2aa76..4c5b4b19 100644
--- a/.github/workflows/update-dev-website.yml
+++ b/.github/workflows/update-dev-website.yml
@@ -11,7 +11,7 @@ permissions:
           
 jobs:
   update_dev_website:
-    uses: Yuri05/Test04/edit/main/.github/workflows/CreateGitHubPagesForR.yml@main
+    uses: ./CreateGitHubPagesForR.yml #Yuri05/Test04/edit/main/.github/workflows/CreateGitHubPagesForR.yml@main
     with:
       pkgdown_mode: 'devel'
       extra_r_packages: 'github::Open-Systems-Pharmacology/OSPSuite.RUtils'