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multimapped shapes #157

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ckmah opened this issue Oct 3, 2024 · 0 comments · Fixed by #158
Open

multimapped shapes #157

ckmah opened this issue Oct 3, 2024 · 0 comments · Fixed by #158
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enhancement New feature or request
Milestone
v2.1.4

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@ckmah
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ckmah commented Oct 3, 2024

Shapes are currently mapped "1 to 1" with _sjoin_shapes() and multiple shapes e.g. nuclei assigned to the same cell shape are dropped and only one is kept. The goal is to support "1 to many" mappings for cells. Some use cases include complex organelles like the ER, golgi, or those with multiple instances in the same cell e.g. condensates, granules, vesicles, or just arbitrary domains.
@ckmah ckmah added the enhancement New feature or request label Oct 3, 2024
@ckmah ckmah added this to the v2.1.4 milestone Oct 3, 2024
@ckmah ckmah mentioned this issue Oct 3, 2024
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@ckmah ckmah linked a pull request Oct 3, 2024 that will close this issue
multimapping shapes #158
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multimapping shapes YeoLab/bento-tools
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