Skip to content

Releases: VirtualFlyBrain/VFB_connect

v2.1.2

21 Aug 14:17
Compare
Choose a tag to compare

What's New
We are introducing a new vfb.term (VFBTerm object) and vfb.terms (VFBTerms list of VFBTerm) which enable Lazy loading of data and full integration of image loading and display via Navis tools e.g. terms.plot3d()
show thumbnails term.show()
open on VFB website: terms.open() term.open()
get a summary as a pandas dataframe: terms.get_summaries() term.summary
Added subtypes and subparts as well as combined children parameters
Added morphological similarity scores and potential driver results.
Added downstream_partners and upstream_partners to VFBTerm
Draft for plot by type or connectivity
Fix for caching if a nonexistent ID get called for

Full Changelog: v2.0.2...v2.1.2

v2.1.1

21 Aug 08:48
Compare
Choose a tag to compare

What's New
We are introducing a new vfb.term (VFBTerm object) and vfb.terms (VFBTerms list of VFBTerm) which enable Lazy loading of data and full integration of image loading and display via Navis tools e.g. terms.plot3d()
show thumbnails term.show()
open on VFB website: terms.open() term.open()
get a summary as a pandas dataframe: terms.get_summaries() term.summary
Added subtypes and subparts as well as combined children parameters
Added morphological similarity scores and potential driver results.
Added downstream_partners and upstream_partners to VFBTerm
Draft for plot by type or connectivity

Full Changelog: v2.0.2...v2.1.1

v2.1.0

20 Aug 14:25
Compare
Choose a tag to compare

What's New
We are introducing a new vfb.term (VFBTerm object) and vfb.terms (VFBTerms list of VFBTerm) which enable Lazy loading of data and full integration of image loading and display via Navis tools e.g. terms.plot3d()
show thumbnails term.show()
open on VFB website: terms.open() term.open()
get a summary as a pandas dataframe: terms.get_summaries() term.summary
Added subtypes and subparts as well as combined children parameters
Added morphological similarity scores and potential driver results.

Full Changelog: v2.0.2...v2.1.0

v2.0.2

20 Aug 10:09
Compare
Choose a tag to compare

What's New
We are introducing a new vfb.term (VFBTerm object) and vfb.terms (VFBTerms list of VFBTerm) which enable Lazy loading of data and full integration of image loading and display via Navis tools e.g. terms.plot3d()
show thumbnails term.show()
open on VFB website: terms.open() term.open()
get a summary as a pandas dataframe: terms.get_summaries() term.summary
Added subtypes and subparts as well as combined children parameters

Full Changelog: v1.6.0...v2.0.2

v2.0.1

19 Aug 23:42
Compare
Choose a tag to compare

What's New
We are introducing a new vfb.term (VFBTerm object) and vfb.terms (VFBTerms list of VFBTerm) which enable Lazy loading of data and full integration of image loading and display via Navis tools e.g. terms.plot3d()
show thumbnails term.show()
open on VFB website: terms.open() term.open()
get a summary as a pandas dataframe: terms.get_summaries() term.summary

Full Changelog: v1.6.0...v2.0.1

v2.0.0

19 Aug 07:34
Compare
Choose a tag to compare

What's New
We are introducing a new vfb.term (VFBTerm object) and vfb.terms (VFBTerms list of VFBTerm) which enable Lazy loading of data and full integration of image loading and display via Navis tools e.g. terms.plot3d()

Full Changelog: v1.6.0...v2.0.0

v1.6.0

17 Aug 08:27
Compare
Choose a tag to compare

What's New
Improved lookup matching
Multiple items are returned as lists rather than as a '|' delimited string in summary results.

Full Changelog: v1.5.1...v1.6.0

v1.5.1

16 Aug 13:27
0b62dc6
Compare
Choose a tag to compare

What's New
Parent Types are now ordered by specificity (ref #132). The first parent should be the most precise term since it has the least chained subtypes.

Full Changelog: v1.5.0...v1.5.1

v1.5.0

14 Aug 11:51
e5cf852
Compare
Choose a tag to compare

What's Changed

  • Simplified initialisation available: from vfb_connect import vfb
  • [Snyk] Security upgrade zipp from 3.15.0 to 3.19.1 by @Robbie1977 in #135

Full Changelog: v1.4.3...v1.5.0

v1.4.3

14 Aug 02:55
Compare
Choose a tag to compare

What's New
Returning DataFrames by default
Caching used for term info
Neo4J (neo_query_wrapper) queries given vc. wrapper versions so users don't need to hunt for queries
Transitioned to Python 3.10.14
minor fixes
Description added to summary

Full Changelog: v1.3.0...v1.4.3