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Score Thresholds from Contributors #313

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bencap opened this issue Oct 1, 2024 · 0 comments · May be fixed by #361 or VariantEffect/mavedb-ui#328
Open

Score Thresholds from Contributors #313

bencap opened this issue Oct 1, 2024 · 0 comments · May be fixed by #361 or VariantEffect/mavedb-ui#328
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@bencap
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app: backend Task implementation touches the backend app: frontend Task implementation touches the frontend sprint: carried over Task was carried over from a previous sprint type: feature New feature workstream: pillar Task relates to pillar project
Milestone
Pillar Project

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@bencap
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bencap commented Oct 1, 2024

We should add functionality to ingest score thresholds and model fits from pillar project contributors, such as those here: https://github.com/Dzeiberg/mave_calibration.

We should add relevant visualizations for these thresholds, provide a framework for their data model (which ideally generalizes well to future thresholds we may include), and provide a mechanism for including such thresholds on future variant level pages.
@bencap bencap added the type: feature New feature label Oct 1, 2024
@bencap bencap added this to the Pillar Project milestone Oct 1, 2024
@bencap bencap added workstream: pillar Task relates to pillar project app: backend Task implementation touches the backend app: frontend Task implementation touches the frontend labels Oct 1, 2024
@bencap bencap added the sprint: carried over Task was carried over from a previous sprint label Nov 4, 2024
@bencap bencap self-assigned this Nov 8, 2024
@bencap bencap linked a pull request Nov 19, 2024 that will close this issue
Contributor Provided Score Thresholds and Calibrations #361
Open
@bencap bencap linked a pull request Dec 17, 2024 that will close this issue
Contributor Supplied Score Thresholds VariantEffect/mavedb-ui#328
Open
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@bencap bencap

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app: backend Task implementation touches the backend app: frontend Task implementation touches the frontend sprint: carried over Task was carried over from a previous sprint type: feature New feature workstream: pillar Task relates to pillar project
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@bencap