dv3d list broken #1285

doutriaux1 · 2015-05-06T04:21:14Z

In [1]: dsc=x.create3d_scalar()

In [2]: dsc.list()
 ---------- DV3D (Gfdv3d) member (attribute) listings ---------
name = __3d_scalar_642267851670046
axes = xyz
---------------------------------------------------------------------------
TypeError                                 Traceback (most recent call last)
<ipython-input-2-b9c9df306f2c> in <module>()
----> 1 dsc.list()

/lgm/uvcdat/2.2.0/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/vcs/dv3d.pyc in list(self)
    185         print 'axes =',self.axes
    186         for pname in self.parameter_names:
--> 187             print ' = '.join( [ pname, self.getParameter( pname ) ] )
    188 
    189 class Gf3Dvector(Gfdv3d):

TypeError: sequence item 1: expected string, NoneType found

The text was updated successfully, but these errors were encountered:

doutriaux1 · 2015-05-06T04:29:24Z

try:

        for pname in self.parameter_names:
            pval = self.getParameter( pname )
            print pname,'=',repr(pval)

doutriaux1 · 2015-05-06T04:30:41Z

@ThomasMaxwell lots of default are initialized as None, you might to initialize with actual values?

ToggleVolumePlot = None
BasemapOpacity = None
Camera = '{}'
PointSize = None
Configure = None
ScaleColormap = None
ChooseColormap = None
ToggleSurfacePlot = None
SliceThickness = None
ScaleOpacity = None
Colorbar = None
ToggleClipping = None
Animation = None
ZSlider = None
IsosurfaceValue = None
YSlider = None
ScaleTransferFunction = None
VerticalScaling = None
XSlider = None
ToggleSphericalProj = None

doutriaux1 · 2015-05-06T04:32:31Z

also should the default for axes really be "xyz" ? Could we set it to (-3 -2 -1) or None which would mean that ? So that sending ANY 3D array would work (just no basemap)

ThomasMaxwell · 2015-05-06T15:49:07Z

These are given default values elsewhere, e.g. ‘interactionButtons.addSliderButton’.

From: Charles Doutriaux <[email protected]mailto:[email protected]>
Reply-To: UV-CDAT/uvcdat <[email protected]mailto:[email protected]>
Date: Wednesday, May 6, 2015 at 12:30 AM
To: UV-CDAT/uvcdat <[email protected]mailto:[email protected]>
Cc: "Maxwell, Thomas P. (GSFC-606.2)[SCIENCE APPLICATIONS INTL CORP]" <[email protected]mailto:[email protected]>
Subject: Re: [uvcdat] dv3d list broken (#1285)

@ThomasMaxwellhttps://github.com/ThomasMaxwell lots of default are initialized as None, you might to initialize with actual values?

ToggleVolumePlot = None
BasemapOpacity = None
Camera = '{}'
PointSize = None
Configure = None
ScaleColormap = None
ChooseColormap = None
ToggleSurfacePlot = None
SliceThickness = None
ScaleOpacity = None
Colorbar = None
ToggleClipping = None
Animation = None
ZSlider = None
IsosurfaceValue = None
YSlider = None
ScaleTransferFunction = None
VerticalScaling = None
XSlider = None
ToggleSphericalProj = None

—
Reply to this email directly or view it on GitHubhttps://github.com//issues/1285#issuecomment-99317962.

ThomasMaxwell · 2015-05-06T16:06:32Z

Dv3d has never been designed to handle raw 3D arrays. It expects datasets that are at least close to COARDS or CF compliant.

From: Charles Doutriaux <[email protected]mailto:[email protected]>
Reply-To: UV-CDAT/uvcdat <[email protected]mailto:[email protected]>
Date: Wednesday, May 6, 2015 at 12:32 AM
To: UV-CDAT/uvcdat <[email protected]mailto:[email protected]>
Cc: "Maxwell, Thomas P. (GSFC-606.2)[SCIENCE APPLICATIONS INTL CORP]" <[email protected]mailto:[email protected]>
Subject: Re: [uvcdat] dv3d list broken (#1285)

also should the default for axes really be "xyz" ? Could we set it to (-3 -2 -1) or None which would mean that ? So that sending ANY 3D array would work (just no basemap)

—
Reply to this email directly or view it on GitHubhttps://github.com//issues/1285#issuecomment-99318047.

ThomasMaxwell · 2015-05-06T16:11:51Z

Fixed in branch vcs3D_fix_dv3d_list.

ThomasMaxwell · 2015-05-06T16:24:42Z

Can whoever is in charge of the diagnostics gui please catch the following UVCDAT gui startup error?:

Location: /usr/local/uvcdat-test/build/install
['Adelon', 'Arabic', 'AvantGarde', 'Chinese', 'Clarendon', 'Courier',
'Greek', 'Hebrew', 'Helvetica', 'Maths1', 'Maths2', 'Maths3', 'Maths4',
'Russian', 'Times', 'default']
Uncaught exception on initialization: KeyError: 'path'
Traceback (most recent call last):
File "/usr/local/uvcdat-test/vistrails/vistrails/uvcdat.py", line 89,
in
v = gui.application.start_application()
File "/usr/local/uvcdat-test/vistrails/vistrails/gui/application.py",
line 703, in start_application
x = VistrailsApplication.init(optionsDict)
File "/usr/local/uvcdat-test/vistrails/vistrails/gui/application.py",
line 160, in init
self.createWindows()
File "/usr/local/uvcdat-test/vistrails/vistrails/gui/application.py",
line 554, in createWindows
self.uvcdatWindow = UVCDATMainWindow()
File
"/usr/local/uvcdat-test/vistrails/vistrails/gui/uvcdat/mainwindow.py",
line 74, in init
self.createDockWindows()
File
"/usr/local/uvcdat-test/vistrails/vistrails/gui/uvcdat/mainwindow.py",
line 166, in createDockWindows
self.diagnosticsWidget = DiagnosticsDockWidget(self)
File
"/usr/local/uvcdat-test/vistrails/vistrails/gui/uvcdat/diagnosticsDockWidget.py",
line 56, in init
self.opts._opts['path'].append(str(self.DS1PathLabel.text()))
KeyError: 'path'
Uncaught exception on initialization: KeyError: 'path'
Traceback (most recent call last):
File "/usr/local/uvcdat-test/vistrails/vistrails/uvcdat.py", line 89,
in
v = gui.application.start_application()
File "/usr/local/uvcdat-test/vistrails/vistrails/gui/application.py",
line 703, in start_application
x = VistrailsApplication.init(optionsDict)
File "/usr/local/uvcdat-test/vistrails/vistrails/gui/application.py",
line 160, in init
self.createWindows()
File "/usr/local/uvcdat-test/vistrails/vistrails/gui/application.py",
line 554, in createWindows
self.uvcdatWindow = UVCDATMainWindow()
File
"/usr/local/uvcdat-test/vistrails/vistrails/gui/uvcdat/mainwindow.py",
line 74, in init
self.createDockWindows()
File
"/usr/local/uvcdat-test/vistrails/vistrails/gui/uvcdat/mainwindow.py",
line 166, in createDockWindows
self.diagnosticsWidget = DiagnosticsDockWidget(self)
File
"/usr/local/uvcdat-test/vistrails/vistrails/gui/uvcdat/diagnosticsDockWidget.py",
line 56, in init
self.opts._opts['path'].append(str(self.DS1PathLabel.text()))
KeyError: 'path'

ThomasMaxwell · 2015-05-06T16:51:39Z

One way to support the input of raw 3D arrays into vcs3D would be to provide some scripts to easily wrap the arrays as cdms TransientVariables, which vcs3D can ingest.

From: , "Maxwell, Thomas P. (GSFC-606.2)[SCIENCE APPLICATIONS INTL CORP]" <[email protected]mailto:[email protected]>
Date: Wednesday, May 6, 2015 at 12:06 PM
To: UV-CDAT/uvcdat <[email protected]mailto:[email protected]>
Subject: Re: [uvcdat] dv3d list broken (#1285)

Dv3d has never been designed to handle raw 3D arrays. It expects datasets that are at least close to COARDS or CF compliant.

From: Charles Doutriaux <[email protected]mailto:[email protected]>
Reply-To: UV-CDAT/uvcdat <[email protected]mailto:[email protected]>
Date: Wednesday, May 6, 2015 at 12:32 AM
To: UV-CDAT/uvcdat <[email protected]mailto:[email protected]>
Cc: "Maxwell, Thomas P. (GSFC-606.2)[SCIENCE APPLICATIONS INTL CORP]" <[email protected]mailto:[email protected]>
Subject: Re: [uvcdat] dv3d list broken (#1285)

also should the default for axes really be "xyz" ? Could we set it to (-3 -2 -1) or None which would mean that ? So that sending ANY 3D array would work (just no basemap)

—
Reply to this email directly or view it on GitHubhttps://github.com//issues/1285#issuecomment-99318047.

doutriaux1 · 2015-05-06T17:39:03Z

so you mean if I pass a 3D MV2 with axis axis_0 axis_1 and axis_2 it is not supposed to work right?
I'll try it just for fun

doutriaux1 added VCS DV3D Bug labels May 6, 2015

doutriaux1 assigned ThomasMaxwell May 6, 2015

doutriaux1 added this to the 2.2 milestone May 6, 2015

ThomasMaxwell mentioned this issue May 6, 2015

Fix list method #1287

Merged

doutriaux1 closed this as completed May 6, 2015

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dv3d list broken #1285

dv3d list broken #1285

doutriaux1 commented May 6, 2015

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doutriaux1 commented May 6, 2015

dv3d list broken #1285

dv3d list broken #1285

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