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NAMESPACE
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NAMESPACE
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#Dependencies
import(ape)
import(stats)
import(dispRity)
importFrom("graphics","plot", "points", "lines", "hist", "text", "polygon", "legend")
importFrom("grDevices","rgb", "as.raster", "adjustcolor", "hcl")
importFrom("MASS","mvrnorm")
importFrom("rgl","plot3d","segments3d","spheres3d","points3d")
importFrom("methods", "formalArgs", "is")
importFrom("utils", "tail")
importFrom("geiger", "bd.km", "bd.ms")
## Main functions
export(treats)
export(print.treats)
export(plot.treats)
## Traits
export(make.traits)
export(link.traits)
export(trait.process)
export(BM.process)
export(discrete.process)
export(OU.process)
export(no.process)
export(multi.peak.process)
export(repulsion.process)
## Modifiers
export(make.modifiers)
export(modifiers)
export(branch.length)
export(branch.length.trait)
export(selection)
export(speciation)
export(speciation.trait)
## Events
export(make.events)
export(events.condition)
export(age.condition)
export(taxa.condition)
export(trait.condition)
export(events.modification)
export(random.extinction)
export(trait.extinction)
export(bd.params.update)
export(traits.update)
export(modifiers.update)
export(founding.event)
## Utilities
export(crude.bd.est)
export(dispRitreats)
export(drop.things)
export(drop.fossils)
export(drop.livings)
export(drop.singles)
export(drop.tip.treats)
export(keep.tip.treats)
export(make.bd.params)
export(make.treats)
export(map.traits)
export(parent.traits)
export(transition.matrix)
##S3
S3method(plot, treats) #incl traits
S3method(print, treats) #incl traits modifiers and events
S3method(drop.tip, treats)
S3method(keep.tip, treats)