From e9b8ef1505587bbe79d3869c752dfd3636b28327 Mon Sep 17 00:00:00 2001 From: Mihail Anton Date: Wed, 15 Jul 2020 10:50:03 +0200 Subject: [PATCH 1/6] feat: add yaml validation --- .github/workflows/yaml-validation.yml | 41 +++++++++++++++++++++++++++ 1 file changed, 41 insertions(+) create mode 100644 .github/workflows/yaml-validation.yml diff --git a/.github/workflows/yaml-validation.yml b/.github/workflows/yaml-validation.yml new file mode 100644 index 00000000..e6d753a2 --- /dev/null +++ b/.github/workflows/yaml-validation.yml @@ -0,0 +1,41 @@ +name: YAML validation + +on: + push: + branches: [ devel ] + pull_request: + branches: [ master, devel ] + +jobs: + yaml-validation: + runs-on: ubuntu-latest + steps: + + - name: Checkout + uses: actions/checkout@v2 + with: + fetch-depth: 1 + + - name: YAML Lint + uses: ibiqlik/action-yamllint@v1.0.0 + continue-on-error: true + with: + ## File(s) or Directory, separate by space if multiple files or folder are specified + file_or_dir: ModelFiles/ + ## Custom configuration (as YAML source) + config_data: "{extends: default, rules: {line-length: disable}}" + ## Format for parsing output [parsable,standard,colored,auto] + # format: # optional, default is colored + ## Return non-zero exit code on warnings as well as errors + # strict: # optional, default is false + + - name: Set up Python 3 + uses: actions/setup-python@v2 + with: + python-version: '3.x' + + - name: Import with cobrapy + continue-on-error: true + run: | + pip install cobra + python -c "import cobra ; cobra.io.load_yaml_model('ModelFiles/yml/yeastGEM.yml')" From 72e1c794eeae43b2e0c12fcfb039c2d9062e2975 Mon Sep 17 00:00:00 2001 From: Mihail Anton Date: Fri, 17 Jul 2020 00:30:43 +0200 Subject: [PATCH 2/6] refactor: rely on ci-requirements --- .github/workflows/yaml-validation.yml | 2 +- requirements/ci-requirements.in | 3 + requirements/ci-requirements.txt | 120 ++++++++++++++++++++++++++ 3 files changed, 124 insertions(+), 1 deletion(-) create mode 100644 requirements/ci-requirements.in create mode 100644 requirements/ci-requirements.txt diff --git a/.github/workflows/yaml-validation.yml b/.github/workflows/yaml-validation.yml index e6d753a2..954ab87b 100644 --- a/.github/workflows/yaml-validation.yml +++ b/.github/workflows/yaml-validation.yml @@ -37,5 +37,5 @@ jobs: - name: Import with cobrapy continue-on-error: true run: | - pip install cobra + pip install -r requirements/ci-requirements.txt python -c "import cobra ; cobra.io.load_yaml_model('ModelFiles/yml/yeastGEM.yml')" diff --git a/requirements/ci-requirements.in b/requirements/ci-requirements.in new file mode 100644 index 00000000..36039b70 --- /dev/null +++ b/requirements/ci-requirements.in @@ -0,0 +1,3 @@ +# Requirements for GitHub Actions: +cobra +memote \ No newline at end of file diff --git a/requirements/ci-requirements.txt b/requirements/ci-requirements.txt new file mode 100644 index 00000000..c2abb5a2 --- /dev/null +++ b/requirements/ci-requirements.txt @@ -0,0 +1,120 @@ +# +# This file is autogenerated by pip-compile +# To update, run: +# +# pip-compile requirements/ci-requirements.in +# +alabaster==0.7.12 # via sphinx +arrow==0.15.7 # via jinja2-time +attrs==19.3.0 # via jsonschema, pytest +babel==2.8.0 # via sphinx +binaryornot==0.4.4 # via cookiecutter +boto3==1.14.22 # via tabulator +botocore==1.17.22 # via boto3, s3transfer +cached-property==1.5.1 # via tableschema +certifi==2020.6.20 # via requests +cffi==1.14.0 # via cryptography +chardet==3.0.4 # via binaryornot, datapackage, requests, tabulator +click-configfile==0.2.3 # via memote +click-default-group==1.2.2 # via goodtables +click-log==0.3.2 # via memote +click==7.1.2 # via click-configfile, click-default-group, click-log, cookiecutter, datapackage, goodtables, memote, nltk, tableschema, tabulator, travis-encrypt +cobra==0.18.1 # via -r requirements/ci-requirements.in, memote +configparser==5.0.0 # via click-configfile +cookiecutter==1.7.2 # via memote +cryptography==2.9.2 # via travis-encrypt +cycler==0.10.0 # via matplotlib +datapackage==1.14.1 # via goodtables +depinfo==1.5.4 # via cobra, memote +docutils==0.15.2 # via botocore, sphinx, statistics +equilibrator-api==0.1.26 # via memote +et-xmlfile==1.0.1 # via openpyxl +future==0.18.2 # via cobra, memote +gitdb==4.0.5 # via gitpython +gitpython==3.1.7 # via memote +goodtables==2.5.0 # via memote +idna==2.10 # via requests +ijson==3.1.post0 # via tabulator +imagesize==1.2.0 # via sphinx +importlib-metadata==1.7.0 # via jsonschema, pluggy, pytest +importlib-resources==3.0.0 # via equilibrator-api, memote +isodate==0.6.0 # via tableschema +jdcal==1.4.1 # via openpyxl +jinja2-time==0.2.0 # via cookiecutter +jinja2==2.11.2 # via cookiecutter, jinja2-time, memote, numpydoc, sphinx +jmespath==0.10.0 # via boto3, botocore +joblib==0.16.0 # via nltk +jsonlines==1.2.0 # via tabulator +jsonpointer==2.0 # via datapackage +jsonschema==3.2.0 # via datapackage, tableschema +kiwisolver==1.2.0 # via matplotlib +linear-tsv==1.1.0 # via tabulator +lxml==4.5.2 # via memote +markupsafe==1.1.1 # via cookiecutter, jinja2 +matplotlib==3.3.0 # via equilibrator-api +memote==0.11.0 # via -r requirements/ci-requirements.in +more-itertools==8.4.0 # via pytest +mpmath==1.1.0 # via sympy +nltk==3.5 # via equilibrator-api +numpy==1.19.0 # via cobra, equilibrator-api, matplotlib, pandas, scipy +numpydoc==1.1.0 # via memote +openpyxl==3.0.4 # via sbtab, tabulator +optlang==1.4.4 # via cobra, equilibrator-api +packaging==20.4 # via pytest, sphinx +pandas==1.0.5 # via cobra, equilibrator-api, memote +pillow==7.2.0 # via matplotlib +pipdeptree==1.0.0 # via depinfo +pluggy==0.13.1 # via pytest +poyo==0.5.0 # via cookiecutter +py==1.9.0 # via pytest +pycparser==2.20 # via cffi +pygments==2.6.1 # via sphinx +pylru==1.2.0 # via memote +pyparsing==2.4.7 # via equilibrator-api, matplotlib, packaging +pyperclip==1.6.0 # via travis-encrypt +pyrsistent==0.16.0 # via jsonschema +pytest==5.4.3 # via memote +python-dateutil==2.8.1 # via arrow, botocore, matplotlib, pandas, tableschema +python-libsbml-experimental==5.18.1 # via cobra +python-libsbml==5.18.0 # via sbtab +python-slugify==4.0.1 # via cookiecutter +pytz==2020.1 # via babel, pandas +pyyaml==5.3.1 # via travis-encrypt +regex==2020.7.14 # via nltk +requests==2.24.0 # via cookiecutter, datapackage, equilibrator-api, goodtables, memote, sphinx, tableschema, tabulator, travis-encrypt +rfc3986==1.4.0 # via tableschema +ruamel.yaml.clib==0.2.0 # via ruamel.yaml +ruamel.yaml==0.16.10 # via cobra, memote +s3transfer==0.3.3 # via boto3 +sbtab==0.9.73 # via equilibrator-api +scipy==1.5.1 # via equilibrator-api +simpleeval==0.9.10 # via goodtables +six==1.15.0 # via click-configfile, cobra, cookiecutter, cryptography, cycler, datapackage, goodtables, isodate, jsonlines, jsonschema, linear-tsv, memote, optlang, packaging, pyrsistent, python-dateutil, tableschema, tabulator +smmap==3.0.4 # via gitdb +snowballstemmer==2.0.0 # via sphinx +sphinx==3.1.2 # via numpydoc +sphinxcontrib-applehelp==1.0.2 # via sphinx +sphinxcontrib-devhelp==1.0.2 # via sphinx +sphinxcontrib-htmlhelp==1.0.3 # via sphinx +sphinxcontrib-jsmath==1.0.1 # via sphinx +sphinxcontrib-qthelp==1.0.3 # via sphinx +sphinxcontrib-serializinghtml==1.1.4 # via sphinx +sqlalchemy==1.3.18 # via memote, tabulator +statistics==1.0.3.5 # via goodtables +swiglpk==4.65.1 # via cobra, optlang +sympy==1.6.1 # via memote, optlang +tableschema==1.19.2 # via datapackage, goodtables +tablib==2.0.0 # via sbtab +tabulator==1.52.3 # via datapackage, goodtables, tableschema +text-unidecode==1.3 # via python-slugify +tqdm==4.48.0 # via nltk +travis-encrypt==1.1.2 # via memote +unicodecsv==0.14.1 # via datapackage, tableschema, tabulator +urllib3==1.25.9 # via botocore, requests +wcwidth==0.2.5 # via pytest +xlrd==1.2.0 # via tabulator +zipp==3.1.0 # via importlib-metadata, importlib-resources + +# The following packages are considered to be unsafe in a requirements file: +# pip +# setuptools \ No newline at end of file From 630abcd82db8a5c2183de850382db3ddbf3b1235 Mon Sep 17 00:00:00 2001 From: Mihail Anton Date: Fri, 17 Jul 2020 07:37:36 +0200 Subject: [PATCH 3/6] feat: allow workflow to fail on error --- .github/workflows/yaml-validation.yml | 2 -- 1 file changed, 2 deletions(-) diff --git a/.github/workflows/yaml-validation.yml b/.github/workflows/yaml-validation.yml index 954ab87b..de97fcfb 100644 --- a/.github/workflows/yaml-validation.yml +++ b/.github/workflows/yaml-validation.yml @@ -18,7 +18,6 @@ jobs: - name: YAML Lint uses: ibiqlik/action-yamllint@v1.0.0 - continue-on-error: true with: ## File(s) or Directory, separate by space if multiple files or folder are specified file_or_dir: ModelFiles/ @@ -35,7 +34,6 @@ jobs: python-version: '3.x' - name: Import with cobrapy - continue-on-error: true run: | pip install -r requirements/ci-requirements.txt python -c "import cobra ; cobra.io.load_yaml_model('ModelFiles/yml/yeastGEM.yml')" From 5e16d26bfff4aa81d40848fb0d66485d63ce0c5e Mon Sep 17 00:00:00 2001 From: Eduard Kerkhoven Date: Tue, 6 Apr 2021 23:43:52 +0200 Subject: [PATCH 4/6] fix-rxn/met: solves #252 and #254 --- .../modelCuration/curationsOnV8_4_2.m | 16 ++++++++++++++++ ModelFiles/dependencies.txt | 6 +++--- ModelFiles/txt/yeastGEM.txt | 2 +- ModelFiles/xml/yeastGEM.xml | 4 ++-- ModelFiles/yml/yeastGEM.yml | 4 ++-- README.md | 6 +++--- 6 files changed, 27 insertions(+), 11 deletions(-) create mode 100644 ComplementaryScripts/modelCuration/curationsOnV8_4_2.m diff --git a/ComplementaryScripts/modelCuration/curationsOnV8_4_2.m b/ComplementaryScripts/modelCuration/curationsOnV8_4_2.m new file mode 100644 index 00000000..d832e54b --- /dev/null +++ b/ComplementaryScripts/modelCuration/curationsOnV8_4_2.m @@ -0,0 +1,16 @@ +%% Curations on version 8.4.2 +% This is a list of various smaller curations to be performed on version +% 8.4.2 of yeast-GEM. Indicated is what Issue is solved. + +% Load model +cd .. +model = loadYeastModel; + +% Solves #252 +model = changeGeneAssociation(model,'r_4590','YOL130W'); + +% Solves #254 +model.metNames = regexprep(model.metNames,'^nicotinamide ribose','nicotinamide riboside'); +% All annotations, formula and charge were correct. + +saveYeastModel(model); diff --git a/ModelFiles/dependencies.txt b/ModelFiles/dependencies.txt index f0930f4c..e763aead 100644 --- a/ModelFiles/dependencies.txt +++ b/ModelFiles/dependencies.txt @@ -1,7 +1,7 @@ -MATLAB 9.7.0.1190202 (R2019b) +MATLAB 9.9.0.1524771 (R2020b) Update 2 libSBML 5.17.0 -RAVEN_toolbox 2.4.1 -COBRA_toolbox commit 6c49aaf +RAVEN_toolbox commit 025f118 +COBRA_toolbox commit 1699e85 SBML_level 3 SBML_version 1 fbc_version 2 diff --git a/ModelFiles/txt/yeastGEM.txt b/ModelFiles/txt/yeastGEM.txt index 44b1cf26..f787d1ad 100644 --- a/ModelFiles/txt/yeastGEM.txt +++ b/ModelFiles/txt/yeastGEM.txt @@ -3948,7 +3948,7 @@ r_4586 s_3998[c] + s_4192[c] -> 2 s_4193[c] 0.00 1000.00 0.00 r_4587 s_0796[e] + s_4199[e] <=> s_0794[c] + s_3880[c] YOL122C -1000.00 1000.00 0.00 r_4588 s_4200[e] <=> s_3778[c] YNL275W -1000.00 1000.00 0.00 r_4589 s_0796[e] + s_4201[e] <=> s_0794[c] + s_4019[c] YOL122C -1000.00 1000.00 0.00 -r_4590 s_0796[e] + s_4202[e] <=> s_0794[c] + s_3801[c] YGR191W -1000.00 1000.00 0.00 +r_4590 s_0796[e] + s_4202[e] <=> s_0794[c] + s_3801[c] YOL130W -1000.00 1000.00 0.00 r_4591 s_0796[e] + s_4203[e] <=> s_0794[c] + s_3822[c] ( YGL255W or YLR130C ) -1000.00 1000.00 0.00 r_4592 s_0796[e] + s_4204[e] <=> s_0794[c] + s_4013[c] ( YGR191W or YOL130W ) -1000.00 1000.00 0.00 r_4593 s_4200[e] <=> -1000.00 1000.00 0.00 diff --git a/ModelFiles/xml/yeastGEM.xml b/ModelFiles/xml/yeastGEM.xml index 8d465939..d28a2259 100644 --- a/ModelFiles/xml/yeastGEM.xml +++ b/ModelFiles/xml/yeastGEM.xml @@ -20570,7 +20570,7 @@ - + @@ -214436,7 +214436,7 @@ - + diff --git a/ModelFiles/yml/yeastGEM.yml b/ModelFiles/yml/yeastGEM.yml index e0524b1f..6cf429a0 100644 --- a/ModelFiles/yml/yeastGEM.yml +++ b/ModelFiles/yml/yeastGEM.yml @@ -11207,7 +11207,7 @@ - sbo: "SBO:0000247" - !!omap - id: "s_1218" - - name: "nicotinamide ribose" + - name: "nicotinamide riboside" - compartment: "c" - formula: "C11H15N2O5" - charge: 1 @@ -99617,7 +99617,7 @@ - s_4202: -1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "YGR191W" + - gene_reaction_rule: "YOL130W" - annotation: !!omap - bigg.reaction: "MNt2" - metanetx.reaction: "MNXR101669" diff --git a/README.md b/README.md index 03075d59..4837e5f6 100644 --- a/README.md +++ b/README.md @@ -10,7 +10,7 @@ This repository contains the current consensus genome-scale metabolic model of _ **GEM Category:** species; **Utilisation:** experimental data reconstruction, multi-omics integrative analysis, _in silico_ strain design, model template; **Field:** metabolic-network reconstruction; **Type of Model:** reconstruction, curated; **Model Source:** YeastMetabolicNetwork; **Omic Source:** genomics, metabolomics; **Taxonomy:** _Saccharomyces cerevisiae_; **Metabolic System:** general metabolism; **Bioreactor**; **Strain:** S288C; **Condition:** aerobic, glucose-limited, defined media; -* Last update: 2020-11-24 +* Last update: 2021-04-06 * Main Model Descriptors: @@ -18,7 +18,7 @@ This repository contains the current consensus genome-scale metabolic model of _ |:-------:|:--------------:|:---------:|:----------:|:-----:| |_Saccharomyces cerevisiae_|[Yeast 7.6](https://sourceforge.net/projects/yeast/)|4058|2742|1150| -This repository is administered by Benjamín J. Sánchez ([@BenjaSanchez](https://github.com/benjasanchez)), Division of Systems and Synthetic Biology, Department of Biology and Biological Engineering, Chalmers University of Technology. +This repository is administered by Benjamín J. Sánchez ([@BenjaSanchez](https://github.com/benjasanchez)), Division of Systems and Synthetic Biology, Department of Biology and Biological Engineering, Chalmers University of Technology. ## Installation @@ -80,7 +80,7 @@ The model is available in `.xml`, `.txt`, `.yml`, `.mat` and `.xlsx` (the last 2 > Lu, H. et al. _A consensus S. cerevisiae metabolic model Yeast8 and its ecosystem for comprehensively probing cellular metabolism._ Nature Communications 10, 3586 (2019). https://doi.org/10.1038/s41467-019-11581-3. * Additionally, all yeast-GEM releases are archived in [Zenodo](https://zenodo.org/badge/latestdoi/52777598), for you to cite the specific version of yeast-GEM that you used in your study, to ensure reproducibility. You should always cite the original publication + the specific version, for instance: - > _The yeast consensus genome-scale model [Lu et al. 2019], version 8.3.4 [Sánchez et al. 2019], was used._ + > _The yeast consensus genome-scale model [Lu et al. 2019], version 8.3.4 [Sánchez et al. 2019], was used._ Find the citation details for your specific version [here](https://zenodo.org/search?page=1&size=20&q=conceptrecid:%221494182%22&sort=-publication_date&all_versions=True). From 56874b0d90ca3dde1970f08403741e549d73f536 Mon Sep 17 00:00:00 2001 From: Eduard Kerkhoven Date: Wed, 7 Apr 2021 11:09:55 +0200 Subject: [PATCH 5/6] fix: deal with special characters in README.md --- ComplementaryScripts/saveYeastModel.m | 3 ++- README.md | 6 +++--- 2 files changed, 5 insertions(+), 4 deletions(-) diff --git a/ComplementaryScripts/saveYeastModel.m b/ComplementaryScripts/saveYeastModel.m index 3f2ec988..75fae7b5 100644 --- a/ComplementaryScripts/saveYeastModel.m +++ b/ComplementaryScripts/saveYeastModel.m @@ -92,7 +92,8 @@ function saveYeastModel(model,upDATE,allowNoGrowth) num2str(length(model.mets)) '|' ... num2str(length(model.genes)) '|' newline]; end - fwrite(fout,inline); + inline=unicode2native(inline,'UTF-8'); + fwrite(fout,inline,'uint8'); end end fclose('all'); diff --git a/README.md b/README.md index 4837e5f6..6cef6900 100644 --- a/README.md +++ b/README.md @@ -10,7 +10,7 @@ This repository contains the current consensus genome-scale metabolic model of _ **GEM Category:** species; **Utilisation:** experimental data reconstruction, multi-omics integrative analysis, _in silico_ strain design, model template; **Field:** metabolic-network reconstruction; **Type of Model:** reconstruction, curated; **Model Source:** YeastMetabolicNetwork; **Omic Source:** genomics, metabolomics; **Taxonomy:** _Saccharomyces cerevisiae_; **Metabolic System:** general metabolism; **Bioreactor**; **Strain:** S288C; **Condition:** aerobic, glucose-limited, defined media; -* Last update: 2021-04-06 +* Last update: 2021-04-07 * Main Model Descriptors: @@ -18,7 +18,7 @@ This repository contains the current consensus genome-scale metabolic model of _ |:-------:|:--------------:|:---------:|:----------:|:-----:| |_Saccharomyces cerevisiae_|[Yeast 7.6](https://sourceforge.net/projects/yeast/)|4058|2742|1150| -This repository is administered by Benjamín J. Sánchez ([@BenjaSanchez](https://github.com/benjasanchez)), Division of Systems and Synthetic Biology, Department of Biology and Biological Engineering, Chalmers University of Technology. +This repository is administered by Benjamín J. Sánchez ([@BenjaSanchez](https://github.com/benjasanchez)), Division of Systems and Synthetic Biology, Department of Biology and Biological Engineering, Chalmers University of Technology. ## Installation @@ -80,7 +80,7 @@ The model is available in `.xml`, `.txt`, `.yml`, `.mat` and `.xlsx` (the last 2 > Lu, H. et al. _A consensus S. cerevisiae metabolic model Yeast8 and its ecosystem for comprehensively probing cellular metabolism._ Nature Communications 10, 3586 (2019). https://doi.org/10.1038/s41467-019-11581-3. * Additionally, all yeast-GEM releases are archived in [Zenodo](https://zenodo.org/badge/latestdoi/52777598), for you to cite the specific version of yeast-GEM that you used in your study, to ensure reproducibility. You should always cite the original publication + the specific version, for instance: - > _The yeast consensus genome-scale model [Lu et al. 2019], version 8.3.4 [Sánchez et al. 2019], was used._ + > _The yeast consensus genome-scale model [Lu et al. 2019], version 8.3.4 [Sánchez et al. 2019], was used._ Find the citation details for your specific version [here](https://zenodo.org/search?page=1&size=20&q=conceptrecid:%221494182%22&sort=-publication_date&all_versions=True). From 1d5b325be7a50a7845dfa5239619a8a8c38f6ae7 Mon Sep 17 00:00:00 2001 From: Eduard Kerkhoven Date: Fri, 9 Apr 2021 23:57:09 +0200 Subject: [PATCH 6/6] fix: valid yaml - using RAVEN PR #338 --- ModelFiles/dependencies.txt | 4 +- ModelFiles/yml/yeastGEM.yml | 185912 ++++++++++++++++++--------------- 2 files changed, 101347 insertions(+), 84569 deletions(-) diff --git a/ModelFiles/dependencies.txt b/ModelFiles/dependencies.txt index e763aead..c9db5a5b 100644 --- a/ModelFiles/dependencies.txt +++ b/ModelFiles/dependencies.txt @@ -1,7 +1,7 @@ MATLAB 9.9.0.1524771 (R2020b) Update 2 libSBML 5.17.0 -RAVEN_toolbox commit 025f118 -COBRA_toolbox commit 1699e85 +RAVEN_toolbox commit 5061381 +COBRA_toolbox commit 800dcfe SBML_level 3 SBML_version 1 fbc_version 2 diff --git a/ModelFiles/yml/yeastGEM.yml b/ModelFiles/yml/yeastGEM.yml index 6cf429a0..4e69b6a4 100644 --- a/ModelFiles/yml/yeastGEM.yml +++ b/ModelFiles/yml/yeastGEM.yml @@ -1,30780 +1,30919 @@ +--- !!omap +- metaData: + id: "yeastGEM_devel" + name: "The Consensus Genome-Scale Metabolic Model of Yeast" + date: "2021-04-09" - metabolites: - - !!omap - - id: "s_0001" - - name: "(1->3)-beta-D-glucan" - - compartment: "ce" - - formula: "C6H10O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0001" + - name: "(1->3)-beta-D-glucan" + - compartment: "ce" + - formula: "C6H10O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "13BDglcn" - chebi: "CHEBI:37671" - kegg.compound: "C00965" - metanetx.chemical: "MNXM6492" - sbo: "SBO:0000247" - - !!omap - - id: "s_0002" - - name: "(1->3)-beta-D-glucan" - - compartment: "c" - - formula: "C6H10O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0002" + - name: "(1->3)-beta-D-glucan" + - compartment: "c" + - formula: "C6H10O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "13BDglcn" - chebi: "CHEBI:37671" - kegg.compound: "C00965" - metanetx.chemical: "MNXM6492" - sbo: "SBO:0000247" - - !!omap - - id: "s_0003" - - name: "(1->3)-beta-D-glucan" - - compartment: "e" - - formula: "C6H10O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0003" + - name: "(1->3)-beta-D-glucan" + - compartment: "e" + - formula: "C6H10O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "13BDglcn" - chebi: "CHEBI:37671" - kegg.compound: "C00965" - metanetx.chemical: "MNXM6492" - sbo: "SBO:0000247" - - !!omap - - id: "s_0004" - - name: "(1->6)-beta-D-glucan" - - compartment: "ce" - - formula: "C6H10O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0004" + - name: "(1->6)-beta-D-glucan" + - compartment: "ce" + - formula: "C6H10O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "16BDglcn" - chebi: "CHEBI:27380" - kegg.compound: "C02493" - metanetx.chemical: "MNXM9375" - sbo: "SBO:0000247" - - !!omap - - id: "s_0006" - - name: "(2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl trihydrogen diphosphate" - - compartment: "m" - - formula: "C7H8N5O8P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0006" + - name: "(2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl trihydrogen diphosphate" + - compartment: "m" + - formula: "C7H8N5O8P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "2ahhmd" - chebi: "CHEBI:57602" - kegg.compound: "C04807" - metanetx.chemical: "MNXM1160" - sbo: "SBO:0000247" - - !!omap - - id: "s_0007" - - name: "(2E)-3-(methoxycarbonyl)pent-2-enedioic acid" - - compartment: "c" - - formula: "C7H6O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0007" + - name: "(2E)-3-(methoxycarbonyl)pent-2-enedioic acid" + - compartment: "c" + - formula: "C7H6O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "aconm" - chebi: "CHEBI:57470" - kegg.compound: "C11514" - metanetx.chemical: "MNXM3742" - sbo: "SBO:0000247" - - !!omap - - id: "s_0008" - - name: "(2R,3R)-2,3-dihydroxy-3-methylpentanoate" - - compartment: "m" - - formula: "C6H11O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0008" + - name: "(2R,3R)-2,3-dihydroxy-3-methylpentanoate" + - compartment: "m" + - formula: "C6H11O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "23dhmp" - chebi: "CHEBI:49258" - kegg.compound: "C06007" - metanetx.chemical: "MNXM1202" - sbo: "SBO:0000247" - - !!omap - - id: "s_0009" - - name: "(2R,3S)-3-isopropylmalate" - - compartment: "c" - - formula: "C7H10O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0009" + - name: "(2R,3S)-3-isopropylmalate" + - compartment: "c" + - formula: "C7H10O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "3c2hmp" - chebi: "CHEBI:35121" - kegg.compound: "C04411" - metanetx.chemical: "MNXM891" - sbo: "SBO:0000247" - - !!omap - - id: "s_0010" - - name: "(2S)-2-isopropyl-3-oxosuccinate" - - compartment: "c" - - formula: "C7H8O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0010" + - name: "(2S)-2-isopropyl-3-oxosuccinate" + - compartment: "c" + - formula: "C7H8O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "3c4mop" - chebi: "CHEBI:17214" - kegg.compound: "C04236" - metanetx.chemical: "MNXM1602" - sbo: "SBO:0000247" - - !!omap - - id: "s_0011" - - name: "(2S)-2-isopropyl-3-oxosuccinate" - - compartment: "m" - - formula: "C7H8O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0011" + - name: "(2S)-2-isopropyl-3-oxosuccinate" + - compartment: "m" + - formula: "C7H8O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "3c4mop" - chebi: "CHEBI:17214" - kegg.compound: "C04236" - metanetx.chemical: "MNXM1602" - sbo: "SBO:0000247" - - !!omap - - id: "s_0012" - - name: "(2S,3R)-3-hydroxybutane-1,2,3-tricarboxylic acid" - - compartment: "m" - - formula: "C7H7O7" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0012" + - name: "(2S,3R)-3-hydroxybutane-1,2,3-tricarboxylic acid" + - compartment: "m" + - formula: "C7H7O7" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "micit" - chebi: "CHEBI:57429" - kegg.compound: "C04593" - metanetx.chemical: "MNXM1694" - sbo: "SBO:0000247" - - !!omap - - id: "s_0013" - - name: "(5S,6S)-di-HETE" - - compartment: "c" - - formula: "C20H31O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0013" + - name: "(5S,6S)-di-HETE" + - compartment: "c" + - formula: "C20H31O4" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:53026" - metanetx.chemical: "MNXM31306" - sbo: "SBO:0000247" - - !!omap - - id: "s_0014" - - name: "(5S,6S)-di-HETE" - - compartment: "n" - - formula: "C20H31O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0014" + - name: "(5S,6S)-di-HETE" + - compartment: "n" + - formula: "C20H31O4" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:53026" - metanetx.chemical: "MNXM31306" - sbo: "SBO:0000247" - - !!omap - - id: "s_0015" - - name: "(N(omega)-L-arginino)succinic acid" - - compartment: "c" - - formula: "C10H17N4O6" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0015" + - name: "(N(omega)-L-arginino)succinic acid" + - compartment: "c" + - formula: "C10H17N4O6" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "argsuc" - chebi: "CHEBI:57472" - kegg.compound: "C03406" - metanetx.chemical: "MNXM722743" - sbo: "SBO:0000247" - - !!omap - - id: "s_0016" - - name: "(R)-2,3-dihydroxy-3-methylbutanoate" - - compartment: "m" - - formula: "C5H9O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0016" + - name: "(R)-2,3-dihydroxy-3-methylbutanoate" + - compartment: "m" + - formula: "C5H9O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "23dhmb" - chebi: "CHEBI:49072" - kegg.compound: "C04272" - metanetx.chemical: "MNXM114097" - sbo: "SBO:0000247" - - !!omap - - id: "s_0017" - - name: "(R)-4'-phosphopantothenic acid" - - compartment: "c" - - formula: "C9H15NO8P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0017" + - name: "(R)-4'-phosphopantothenic acid" + - compartment: "c" + - formula: "C9H15NO8P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "4ppan" - chebi: "CHEBI:15905" - kegg.compound: "C03492" - metanetx.chemical: "MNXM415" - sbo: "SBO:0000247" - - !!omap - - id: "s_0018" - - name: "(R)-5-diphosphomevalonic acid" - - compartment: "c" - - formula: "C6H10O10P2" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0018" + - name: "(R)-5-diphosphomevalonic acid" + - compartment: "c" + - formula: "C6H10O10P2" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "5dpmev" - chebi: "CHEBI:57557" - kegg.compound: "C01143" - metanetx.chemical: "MNXM689" - sbo: "SBO:0000247" - - !!omap - - id: "s_0019" - - name: "(R)-5-phosphomevalonic acid" - - compartment: "c" - - formula: "C6H10O7P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0019" + - name: "(R)-5-phosphomevalonic acid" + - compartment: "c" + - formula: "C6H10O7P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "5pmev" - chebi: "CHEBI:58146" - kegg.compound: "C01107" - metanetx.chemical: "MNXM567" - sbo: "SBO:0000247" - - !!omap - - id: "s_0020" - - name: "(R)-acetoin" - - compartment: "c" - - formula: "C4H8O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0020" + - name: "(R)-acetoin" + - compartment: "c" + - formula: "C4H8O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "actn__R" - chebi: "CHEBI:15686" - kegg.compound: "C00810" - metanetx.chemical: "MNXM664" - sbo: "SBO:0000247" - - !!omap - - id: "s_0021" - - name: "(R)-carnitine" - - compartment: "c" - - formula: "C7H15NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0021" + - name: "(R)-carnitine" + - compartment: "c" + - formula: "C7H15NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "crn" - chebi: "CHEBI:16347" - kegg.compound: "C00318" - metanetx.chemical: "MNXM173" - sbo: "SBO:0000247" - - !!omap - - id: "s_0022" - - name: "(R)-carnitine" - - compartment: "e" - - formula: "C7H15NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0022" + - name: "(R)-carnitine" + - compartment: "e" + - formula: "C7H15NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "crn" - chebi: "CHEBI:16347" - kegg.compound: "C00318" - metanetx.chemical: "MNXM173" - sbo: "SBO:0000247" - - !!omap - - id: "s_0023" - - name: "(R)-carnitine" - - compartment: "m" - - formula: "C7H15NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0023" + - name: "(R)-carnitine" + - compartment: "m" + - formula: "C7H15NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "crn" - chebi: "CHEBI:16347" - kegg.compound: "C00318" - metanetx.chemical: "MNXM173" - sbo: "SBO:0000247" - - !!omap - - id: "s_0024" - - name: "(R)-carnitine" - - compartment: "p" - - formula: "C7H15NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0024" + - name: "(R)-carnitine" + - compartment: "p" + - formula: "C7H15NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "crn" - chebi: "CHEBI:16347" - kegg.compound: "C00318" - metanetx.chemical: "MNXM173" - sbo: "SBO:0000247" - - !!omap - - id: "s_0025" - - name: "(R)-lactate" - - compartment: "c" - - formula: "C3H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0025" + - name: "(R)-lactate" + - compartment: "c" + - formula: "C3H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lac__D" - chebi: "CHEBI:16004" - kegg.compound: "C00256" - metanetx.chemical: "MNXM285" - sbo: "SBO:0000247" - - !!omap - - id: "s_0026" - - name: "(R)-lactate" - - compartment: "e" - - formula: "C3H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0026" + - name: "(R)-lactate" + - compartment: "e" + - formula: "C3H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lac__D" - chebi: "CHEBI:16004" - kegg.compound: "C00256" - metanetx.chemical: "MNXM285" - sbo: "SBO:0000247" - - !!omap - - id: "s_0027" - - name: "(R)-lactate" - - compartment: "m" - - formula: "C3H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0027" + - name: "(R)-lactate" + - compartment: "m" + - formula: "C3H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lac__D" - chebi: "CHEBI:16004" - kegg.compound: "C00256" - metanetx.chemical: "MNXM285" - sbo: "SBO:0000247" - - !!omap - - id: "s_0028" - - name: "(R)-mevalonate" - - compartment: "c" - - formula: "C6H11O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0028" + - name: "(R)-mevalonate" + - compartment: "c" + - formula: "C6H11O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "mev__R" - chebi: "CHEBI:36464" - kegg.compound: "C00418" - metanetx.chemical: "MNXM333" - sbo: "SBO:0000247" - - !!omap - - id: "s_0029" - - name: "(R)-mevalonate" - - compartment: "e" - - formula: "C6H11O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0029" + - name: "(R)-mevalonate" + - compartment: "e" + - formula: "C6H11O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "mev__R" - chebi: "CHEBI:36464" - kegg.compound: "C00418" - metanetx.chemical: "MNXM333" - sbo: "SBO:0000247" - - !!omap - - id: "s_0030" - - name: "(R)-pantoate" - - compartment: "c" - - formula: "C6H11O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0030" + - name: "(R)-pantoate" + - compartment: "c" + - formula: "C6H11O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "pant__R" - chebi: "CHEBI:15980" - kegg.compound: "C00522" - metanetx.chemical: "MNXM593" - sbo: "SBO:0000247" - - !!omap - - id: "s_0031" - - name: "(R)-pantothenate" - - compartment: "c" - - formula: "C9H16NO5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0031" + - name: "(R)-pantothenate" + - compartment: "c" + - formula: "C9H16NO5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "pnto__R" - chebi: "CHEBI:29032" - kegg.compound: "C00864" - metanetx.chemical: "MNXM364" - sbo: "SBO:0000247" - - !!omap - - id: "s_0032" - - name: "(R)-pantothenate" - - compartment: "e" - - formula: "C9H16NO5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0032" + - name: "(R)-pantothenate" + - compartment: "e" + - formula: "C9H16NO5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "pnto__R" - chebi: "CHEBI:29032" - kegg.compound: "C00864" - metanetx.chemical: "MNXM364" - sbo: "SBO:0000247" - - !!omap - - id: "s_0033" - - name: "(R)-S-lactoylglutathione" - - compartment: "c" - - formula: "C13H20N3O8S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0033" + - name: "(R)-S-lactoylglutathione" + - compartment: "c" + - formula: "C13H20N3O8S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lgt__S" - chebi: "CHEBI:57474" - kegg.compound: "C03451" - metanetx.chemical: "MNXM1253" - sbo: "SBO:0000247" - - !!omap - - id: "s_0034" - - name: "(R)-S-lactoylglutathione" - - compartment: "m" - - formula: "C13H20N3O8S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0034" + - name: "(R)-S-lactoylglutathione" + - compartment: "m" + - formula: "C13H20N3O8S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lgt__S" - chebi: "CHEBI:57474" - kegg.compound: "C03451" - metanetx.chemical: "MNXM1253" - sbo: "SBO:0000247" - - !!omap - - id: "s_0035" - - name: "(R,R)-2,3-butanediol" - - compartment: "c" - - formula: "C4H10O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0035" + - name: "(R,R)-2,3-butanediol" + - compartment: "c" + - formula: "C4H10O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "btd_RR" - chebi: "CHEBI:16982" - kegg.compound: "C03044" - metanetx.chemical: "MNXM2757" - sbo: "SBO:0000247" - - !!omap - - id: "s_0036" - - name: "(R,R)-2,3-butanediol" - - compartment: "e" - - formula: "C4H10O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0036" + - name: "(R,R)-2,3-butanediol" + - compartment: "e" + - formula: "C4H10O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "btd_RR" - chebi: "CHEBI:16982" - kegg.compound: "C03044" - metanetx.chemical: "MNXM2757" - sbo: "SBO:0000247" - - !!omap - - id: "s_0037" - - name: "(S)-2,3-epoxysqualene" - - compartment: "c" - - formula: "C30H50O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0037" + - name: "(S)-2,3-epoxysqualene" + - compartment: "c" + - formula: "C30H50O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "Ssq23epx" - chebi: "CHEBI:15441" - kegg.compound: "C01054" - metanetx.chemical: "MNXM130" - sbo: "SBO:0000247" - - !!omap - - id: "s_0038" - - name: "(S)-2,3-epoxysqualene" - - compartment: "er" - - formula: "C30H50O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0038" + - name: "(S)-2,3-epoxysqualene" + - compartment: "er" + - formula: "C30H50O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "Ssq23epx" - chebi: "CHEBI:15441" - kegg.compound: "C01054" - metanetx.chemical: "MNXM130" - sbo: "SBO:0000247" - - !!omap - - id: "s_0039" - - name: "(S)-2-acetyl-2-hydroxybutanoate" - - compartment: "m" - - formula: "C6H9O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0039" + - name: "(S)-2-acetyl-2-hydroxybutanoate" + - compartment: "m" + - formula: "C6H9O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "2ahbut" - chebi: "CHEBI:49256" - kegg.compound: "C06006" - metanetx.chemical: "MNXM114220" - sbo: "SBO:0000247" - - !!omap - - id: "s_0042" - - name: "(R)-3-hydroxydecanoyl-CoA" - - compartment: "p" - - formula: "C31H50N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0042" + - name: "(R)-3-hydroxydecanoyl-CoA" + - compartment: "p" + - formula: "C31H50N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3hdcoa" - chebi: "CHEBI:28325" - kegg.compound: "C05264" - metanetx.chemical: "MNXM674" - sbo: "SBO:0000247" - - !!omap - - id: "s_0045" - - name: "(S)-3-hydroxyhexacosanoyl-CoA" - - compartment: "p" - - formula: "C47H82N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0045" + - name: "(S)-3-hydroxyhexacosanoyl-CoA" + - compartment: "p" + - formula: "C47H82N7O18P3S" + - charge: -4 + - annotation: !!omap - chebi: "CHEBI:52976" - metanetx.chemical: "MNXM31741" - sbo: "SBO:0000247" - - !!omap - - id: "s_0048" - - name: "(R)-3-hydroxylauroyl-CoA" - - compartment: "p" - - formula: "C33H54N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0048" + - name: "(R)-3-hydroxylauroyl-CoA" + - compartment: "p" + - formula: "C33H54N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3hddcoa" - chebi: "CHEBI:27668" - kegg.compound: "C05262" - metanetx.chemical: "MNXM733" - sbo: "SBO:0000247" - - !!omap - - id: "s_0051" - - name: "(S)-3-hydroxypalmitoyl-CoA" - - compartment: "p" - - formula: "C37H62N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0051" + - name: "(S)-3-hydroxypalmitoyl-CoA" + - compartment: "p" + - formula: "C37H62N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3hhdcoa" - chebi: "CHEBI:27402" - kegg.compound: "C05258" - metanetx.chemical: "MNXM825" - sbo: "SBO:0000247" - - !!omap - - id: "s_0054" - - name: "(S)-3-hydroxytetradecanoyl-CoA" - - compartment: "p" - - formula: "C35H58N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0054" + - name: "(S)-3-hydroxytetradecanoyl-CoA" + - compartment: "p" + - formula: "C35H58N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3htdcoa" - chebi: "CHEBI:27466" - kegg.compound: "C05260" - metanetx.chemical: "MNXM767" - sbo: "SBO:0000247" - - !!omap - - id: "s_0056" - - name: "(S)-3-methyl-2-oxopentanoate" - - compartment: "c" - - formula: "C6H9O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0056" + - name: "(S)-3-methyl-2-oxopentanoate" + - compartment: "c" + - formula: "C6H9O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3mop" - chebi: "CHEBI:35146" - kegg.compound: "C00671" - metanetx.chemical: "MNXM439" - sbo: "SBO:0000247" - - !!omap - - id: "s_0058" - - name: "(S)-3-methyl-2-oxopentanoate" - - compartment: "e" - - formula: "C6H9O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0058" + - name: "(S)-3-methyl-2-oxopentanoate" + - compartment: "e" + - formula: "C6H9O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3mop" - chebi: "CHEBI:35146" - kegg.compound: "C00671" - metanetx.chemical: "MNXM439" - sbo: "SBO:0000247" - - !!omap - - id: "s_0060" - - name: "(S)-3-methyl-2-oxopentanoate" - - compartment: "m" - - formula: "C6H9O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0060" + - name: "(S)-3-methyl-2-oxopentanoate" + - compartment: "m" + - formula: "C6H9O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3mop" - chebi: "CHEBI:35146" - kegg.compound: "C00671" - metanetx.chemical: "MNXM439" - sbo: "SBO:0000247" - - !!omap - - id: "s_0061" - - name: "(S)-dihydroorotate" - - compartment: "c" - - formula: "C5H5N2O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0061" + - name: "(S)-dihydroorotate" + - compartment: "c" + - formula: "C5H5N2O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "dhor__S" - chebi: "CHEBI:30864" - kegg.compound: "C00337" - metanetx.chemical: "MNXM252" - sbo: "SBO:0000247" - - !!omap - - id: "s_0062" - - name: "(S)-lactaldehyde" - - compartment: "c" - - formula: "C3H6O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0062" + - name: "(S)-lactaldehyde" + - compartment: "c" + - formula: "C3H6O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "lald__L" - chebi: "CHEBI:18041" - kegg.compound: "C00424" - metanetx.chemical: "MNXM2387" - sbo: "SBO:0000247" - - !!omap - - id: "s_0063" - - name: "(S)-lactate" - - compartment: "c" - - formula: "C3H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0063" + - name: "(S)-lactate" + - compartment: "c" + - formula: "C3H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lac__L" - chebi: "CHEBI:16651" - kegg.compound: "C00186" - metanetx.chemical: "MNXM179" - sbo: "SBO:0000247" - - !!omap - - id: "s_0064" - - name: "(S)-lactate" - - compartment: "e" - - formula: "C3H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0064" + - name: "(S)-lactate" + - compartment: "e" + - formula: "C3H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lac__L" - chebi: "CHEBI:16651" - kegg.compound: "C00186" - metanetx.chemical: "MNXM179" - sbo: "SBO:0000247" - - !!omap - - id: "s_0065" - - name: "(S)-lactate" - - compartment: "m" - - formula: "C3H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0065" + - name: "(S)-lactate" + - compartment: "m" + - formula: "C3H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lac__L" - chebi: "CHEBI:16651" - kegg.compound: "C00186" - metanetx.chemical: "MNXM179" - sbo: "SBO:0000247" - - !!omap - - id: "s_0066" - - name: "(S)-malate" - - compartment: "c" - - formula: "C4H4O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0066" + - name: "(S)-malate" + - compartment: "c" + - formula: "C4H4O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mal__L" - chebi: "CHEBI:15589" - kegg.compound: "C00149" - metanetx.chemical: "MNXM98" - sbo: "SBO:0000247" - - !!omap - - id: "s_0067" - - name: "(S)-malate" - - compartment: "e" - - formula: "C4H4O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0067" + - name: "(S)-malate" + - compartment: "e" + - formula: "C4H4O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mal__L" - chebi: "CHEBI:15589" - kegg.compound: "C00149" - metanetx.chemical: "MNXM98" - sbo: "SBO:0000247" - - !!omap - - id: "s_0068" - - name: "(S)-malate" - - compartment: "m" - - formula: "C4H4O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0068" + - name: "(S)-malate" + - compartment: "m" + - formula: "C4H4O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mal__L" - chebi: "CHEBI:15589" - kegg.compound: "C00149" - metanetx.chemical: "MNXM98" - sbo: "SBO:0000247" - - !!omap - - id: "s_0069" - - name: "(S)-malate" - - compartment: "p" - - formula: "C4H4O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0069" + - name: "(S)-malate" + - compartment: "p" + - formula: "C4H4O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mal__L" - chebi: "CHEBI:15589" - kegg.compound: "C00149" - metanetx.chemical: "MNXM98" - sbo: "SBO:0000247" - - !!omap - - id: "s_0075" - - name: "1,3-bisphospho-D-glycerate" - - compartment: "c" - - formula: "C3H4O10P2" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0075" + - name: "1,3-bisphospho-D-glycerate" + - compartment: "c" + - formula: "C3H4O10P2" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "13dpg" - chebi: "CHEBI:57604" - kegg.compound: "C00236" - metanetx.chemical: "MNXM261" - sbo: "SBO:0000247" - - !!omap - - id: "s_0076" - - name: "1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate" - - compartment: "c" - - formula: "C12H13NO9P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0076" + - name: "1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate" + - compartment: "c" + - formula: "C12H13NO9P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "2cpr5p" - chebi: "CHEBI:58613" - kegg.compound: "C01302" - metanetx.chemical: "MNXM1455" - sbo: "SBO:0000247" - - !!omap - - id: "s_0077" - - name: "1-(5-phospho-D-ribosyl)-5-[(5-phospho-D-ribosylamino)methylideneamino]imidazole-4-carboxamide" - - compartment: "c" - - formula: "C15H21N5O15P2" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0077" + - name: "1-(5-phospho-D-ribosyl)-5-[(5-phospho-D-ribosylamino)methylideneamino]imidazole-4-carboxamide" + - compartment: "c" + - formula: "C15H21N5O15P2" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "prfp" - chebi: "CHEBI:58435" - kegg.compound: "C04896" - metanetx.chemical: "MNXM1397" - sbo: "SBO:0000247" - - !!omap - - id: "s_0078" - - name: "1-(5-phosphoribosyl)-5'-AMP" - - compartment: "c" - - formula: "C15H19N5O14P2" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0078" + - name: "1-(5-phosphoribosyl)-5'-AMP" + - compartment: "c" + - formula: "C15H19N5O14P2" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "prbamp" - chebi: "CHEBI:59457" - kegg.compound: "C02741" - metanetx.chemical: "MNXM1515" - sbo: "SBO:0000247" - - !!omap - - id: "s_0079" - - name: "1-(sn-glycero-3-phospho)-1D-myo-inositol" - - compartment: "c" - - formula: "C9H18O11P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0079" + - name: "1-(sn-glycero-3-phospho)-1D-myo-inositol" + - compartment: "c" + - formula: "C9H18O11P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "g3pi" - chebi: "CHEBI:58444" - kegg.compound: "C01225" - metanetx.chemical: "MNXM1517" - sbo: "SBO:0000247" - - !!omap - - id: "s_0080" - - name: "1-(sn-glycero-3-phospho)-1D-myo-inositol" - - compartment: "e" - - formula: "C9H18O11P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0080" + - name: "1-(sn-glycero-3-phospho)-1D-myo-inositol" + - compartment: "e" + - formula: "C9H18O11P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "g3pi" - chebi: "CHEBI:58444" - kegg.compound: "C01225" - metanetx.chemical: "MNXM1517" - sbo: "SBO:0000247" - - !!omap - - id: "s_0084" - - name: "1-acylglycerophosphocholine" - - compartment: "e" - - formula: "C9H20NO7PR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0084" + - name: "1-acylglycerophosphocholine" + - compartment: "e" + - formula: "C9H20NO7PR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "pchol_cho" - chebi: "CHEBI:11230" - kegg.compound: "C04230" - metanetx.chemical: "MNXM96952" - sbo: "SBO:0000247" - - !!omap - - id: "s_0086" - - name: "1-C-(indol-3-yl)glycerol 3-phosphate" - - compartment: "c" - - formula: "C11H12NO6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0086" + - name: "1-C-(indol-3-yl)glycerol 3-phosphate" + - compartment: "c" + - formula: "C11H12NO6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "3ig3p" - chebi: "CHEBI:60820" - kegg.compound: "C03506" - metanetx.chemical: "MNXM163633" - sbo: "SBO:0000247" - - !!omap - - id: "s_0087" - - name: "1-methylnicotinamide" - - compartment: "c" - - formula: "C7H9N2O" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0087" + - name: "1-methylnicotinamide" + - compartment: "c" + - formula: "C7H9N2O" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "1mncam" - chebi: "CHEBI:16797" - kegg.compound: "C02918" - metanetx.chemical: "MNXM2172" - sbo: "SBO:0000247" - - !!omap - - id: "s_0089" - - name: "1-phosphatidyl-1D-myo-inositol backbone" - - compartment: "c" - - formula: "C9H15O9P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0089" + - name: "1-phosphatidyl-1D-myo-inositol backbone" + - compartment: "c" + - formula: "C9H15O9P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "pail_cho" - chebi: "CHEBI:57880" - kegg.compound: "C01194" - metanetx.chemical: "MNXM62" - sbo: "SBO:0000649" - - !!omap - - id: "s_0116" - - name: "1-pyrroline-3-hydroxy-5-carboxylic acid" - - compartment: "c" - - formula: "C5H6NO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0116" + - name: "1-pyrroline-3-hydroxy-5-carboxylic acid" + - compartment: "c" + - formula: "C5H6NO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "1p3h5c" - chebi: "CHEBI:58509" - kegg.compound: "C04281" - metanetx.chemical: "MNXM114091" - sbo: "SBO:0000247" - - !!omap - - id: "s_0117" - - name: "1-pyrroline-3-hydroxy-5-carboxylic acid" - - compartment: "m" - - formula: "C5H6NO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0117" + - name: "1-pyrroline-3-hydroxy-5-carboxylic acid" + - compartment: "m" + - formula: "C5H6NO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "1p3h5c" - chebi: "CHEBI:58509" - kegg.compound: "C04281" - metanetx.chemical: "MNXM114091" - sbo: "SBO:0000247" - - !!omap - - id: "s_0118" - - name: "1-pyrroline-5-carboxylate" - - compartment: "c" - - formula: "C5H6NO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0118" + - name: "1-pyrroline-5-carboxylate" + - compartment: "c" + - formula: "C5H6NO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "1pyr5c" - chebi: "CHEBI:15893" - kegg.compound: "C04322" - metanetx.chemical: "MNXM1617" - sbo: "SBO:0000247" - - !!omap - - id: "s_0119" - - name: "1-pyrroline-5-carboxylate" - - compartment: "m" - - formula: "C5H6NO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0119" + - name: "1-pyrroline-5-carboxylate" + - compartment: "m" + - formula: "C5H6NO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "1pyr5c" - chebi: "CHEBI:15893" - kegg.compound: "C04322" - metanetx.chemical: "MNXM1617" - sbo: "SBO:0000247" - - !!omap - - id: "s_0120" - - name: "10-formyl-THF" - - compartment: "c" - - formula: "C20H21N7O7" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0120" + - name: "10-formyl-THF" + - compartment: "c" + - formula: "C20H21N7O7" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "10fthf" - chebi: "CHEBI:57454" - kegg.compound: "C00234" - metanetx.chemical: "MNXM237" - sbo: "SBO:0000247" - - !!omap - - id: "s_0121" - - name: "10-formyl-THF" - - compartment: "m" - - formula: "C20H21N7O7" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0121" + - name: "10-formyl-THF" + - compartment: "m" + - formula: "C20H21N7O7" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "10fthf" - chebi: "CHEBI:57454" - kegg.compound: "C00234" - metanetx.chemical: "MNXM237" - sbo: "SBO:0000247" - - !!omap - - id: "s_0122" - - name: "14-demethyllanosterol" - - compartment: "c" - - formula: "C29H48O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0122" + - name: "14-demethyllanosterol" + - compartment: "c" + - formula: "C29H48O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "44mzym" - chebi: "CHEBI:18364" - kegg.compound: "C05108" - metanetx.chemical: "MNXM913" - sbo: "SBO:0000247" - - !!omap - - id: "s_0123" - - name: "1D-myo-inositol 1,3,4,5-tetrakisphosphate" - - compartment: "n" - - formula: "C6H8O18P4" - - charge: -8 - - annotation: !!omap + - !!omap + - id: "s_0123" + - name: "1D-myo-inositol 1,3,4,5-tetrakisphosphate" + - compartment: "n" + - formula: "C6H8O18P4" + - charge: -8 + - annotation: !!omap - bigg.metabolite: "mi1345p" - chebi: "CHEBI:57895" - kegg.compound: "C01272" - metanetx.chemical: "MNXM624" - sbo: "SBO:0000247" - - !!omap - - id: "s_0124" - - name: "1D-myo-inositol 1,4,5,6-tetrakisphosphate" - - compartment: "n" - - formula: "C6H8O18P4" - - charge: -8 - - annotation: !!omap + - !!omap + - id: "s_0124" + - name: "1D-myo-inositol 1,4,5,6-tetrakisphosphate" + - compartment: "n" + - formula: "C6H8O18P4" + - charge: -8 + - annotation: !!omap - bigg.metabolite: "mi3456p" - chebi: "CHEBI:57627" - kegg.compound: "C11555" - metanetx.chemical: "MNXM1620" - sbo: "SBO:0000247" - - !!omap - - id: "s_0125" - - name: "1D-myo-inositol 1,4,5-trisphosphate" - - compartment: "n" - - formula: "C6H9O15P3" - - charge: -6 - - annotation: !!omap + - !!omap + - id: "s_0125" + - name: "1D-myo-inositol 1,4,5-trisphosphate" + - compartment: "n" + - formula: "C6H9O15P3" + - charge: -6 + - annotation: !!omap - bigg.metabolite: "mi145p" - chebi: "CHEBI:203600" - kegg.compound: "C01245" - metanetx.chemical: "MNXM200" - sbo: "SBO:0000247" - - !!omap - - id: "s_0126" - - name: "1D-myo-inositol 1-phosphate" - - compartment: "c" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0126" + - name: "1D-myo-inositol 1-phosphate" + - compartment: "c" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mi1p__D" - chebi: "CHEBI:58433" - kegg.compound: "C01177" - metanetx.chemical: "MNXM646" - sbo: "SBO:0000247" - - !!omap - - id: "s_0127" - - name: "1D-myo-inositol 1-phosphate" - - compartment: "er" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0127" + - name: "1D-myo-inositol 1-phosphate" + - compartment: "er" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mi1p__D" - chebi: "CHEBI:58433" - kegg.compound: "C01177" - metanetx.chemical: "MNXM646" - sbo: "SBO:0000247" - - !!omap - - id: "s_0129" - - name: "1D-myo-inositol 3-phosphate" - - compartment: "m" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0129" + - name: "1D-myo-inositol 3-phosphate" + - compartment: "m" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mi3p__D" - chebi: "CHEBI:58401" - kegg.compound: "C04006" - metanetx.chemical: "MNXM540" - sbo: "SBO:0000247" - - !!omap - - id: "s_0131" - - name: "2',3'-cyclic AMP" - - compartment: "c" - - formula: "C10H11N5O6P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0131" + - name: "2',3'-cyclic AMP" + - compartment: "c" + - formula: "C10H11N5O6P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "23camp" - chebi: "CHEBI:60879" - kegg.compound: "C02353" - metanetx.chemical: "MNXM2598" - sbo: "SBO:0000247" - - !!omap - - id: "s_0132" - - name: "2'-deoxyadenosine" - - compartment: "c" - - formula: "C10H13N5O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0132" + - name: "2'-deoxyadenosine" + - compartment: "c" + - formula: "C10H13N5O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dad_2" - chebi: "CHEBI:17256" - kegg.compound: "C00559" - metanetx.chemical: "MNXM625" - sbo: "SBO:0000247" - - !!omap - - id: "s_0133" - - name: "2'-deoxyadenosine" - - compartment: "e" - - formula: "C10H13N5O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0133" + - name: "2'-deoxyadenosine" + - compartment: "e" + - formula: "C10H13N5O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dad_2" - chebi: "CHEBI:17256" - kegg.compound: "C00559" - metanetx.chemical: "MNXM625" - sbo: "SBO:0000247" - - !!omap - - id: "s_0134" - - name: "2'-deoxyguanosine" - - compartment: "c" - - formula: "C10H13N5O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0134" + - name: "2'-deoxyguanosine" + - compartment: "c" + - formula: "C10H13N5O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dgsn" - chebi: "CHEBI:17172" - kegg.compound: "C00330" - metanetx.chemical: "MNXM647" - sbo: "SBO:0000247" - - !!omap - - id: "s_0135" - - name: "2'-deoxyguanosine" - - compartment: "e" - - formula: "C10H13N5O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0135" + - name: "2'-deoxyguanosine" + - compartment: "e" + - formula: "C10H13N5O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dgsn" - chebi: "CHEBI:17172" - kegg.compound: "C00330" - metanetx.chemical: "MNXM647" - sbo: "SBO:0000247" - - !!omap - - id: "s_0136" - - name: "2'-deoxyinosine" - - compartment: "c" - - formula: "C10H12N4O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0136" + - name: "2'-deoxyinosine" + - compartment: "c" + - formula: "C10H12N4O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "din" - chebi: "CHEBI:28997" - kegg.compound: "C05512" - metanetx.chemical: "MNXM935" - sbo: "SBO:0000247" - - !!omap - - id: "s_0137" - - name: "2'-deoxyinosine" - - compartment: "e" - - formula: "C10H12N4O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0137" + - name: "2'-deoxyinosine" + - compartment: "e" + - formula: "C10H12N4O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "din" - chebi: "CHEBI:28997" - kegg.compound: "C05512" - metanetx.chemical: "MNXM935" - sbo: "SBO:0000247" - - !!omap - - id: "s_0138" - - name: "2'-deoxyuridine" - - compartment: "c" - - formula: "C9H12N2O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0138" + - name: "2'-deoxyuridine" + - compartment: "c" + - formula: "C9H12N2O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "duri" - chebi: "CHEBI:16450" - kegg.compound: "C00526" - metanetx.chemical: "MNXM492" - sbo: "SBO:0000247" - - !!omap - - id: "s_0139" - - name: "2'-deoxyuridine" - - compartment: "e" - - formula: "C9H12N2O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0139" + - name: "2'-deoxyuridine" + - compartment: "e" + - formula: "C9H12N2O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "duri" - chebi: "CHEBI:16450" - kegg.compound: "C00526" - metanetx.chemical: "MNXM492" - sbo: "SBO:0000247" - - !!omap - - id: "s_0140" - - name: "2,3-bisphospho-D-glyceric acid" - - compartment: "c" - - formula: "C3H3O10P2" - - charge: -5 - - annotation: !!omap + - !!omap + - id: "s_0140" + - name: "2,3-bisphospho-D-glyceric acid" + - compartment: "c" + - formula: "C3H3O10P2" + - charge: -5 + - annotation: !!omap - bigg.metabolite: "23dpg" - chebi: "CHEBI:58248" - kegg.compound: "C01159" - metanetx.chemical: "MNXM892" - sbo: "SBO:0000247" - - !!omap - - id: "s_0141" - - name: "2,5-diamino-4-hydroxy-6-(5-phosphoribosylamino)pyrimidine" - - compartment: "c" - - formula: "C9H14N5O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0141" + - name: "2,5-diamino-4-hydroxy-6-(5-phosphoribosylamino)pyrimidine" + - compartment: "c" + - formula: "C9H14N5O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "25drapp" - chebi: "CHEBI:58614" - kegg.compound: "C01304" - metanetx.chemical: "MNXM648" - sbo: "SBO:0000247" - - !!omap - - id: "s_0142" - - name: "2,5-diamino-6-(5-phosphono)ribitylamino-4(3H)-pyrimidinone" - - compartment: "c" - - formula: "C9H16N5O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0142" + - name: "2,5-diamino-6-(5-phosphono)ribitylamino-4(3H)-pyrimidinone" + - compartment: "c" + - formula: "C9H16N5O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "25dthpp" - chebi: "CHEBI:52957" - kegg.compound: "C18910" - metanetx.chemical: "MNXM1099" - sbo: "SBO:0000247" - - !!omap - - id: "s_0143" - - name: "2-(3-amino-3-carboxypropyl)-L-histidine" - - compartment: "c" - - formula: "C10H16N4O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0143" + - name: "2-(3-amino-3-carboxypropyl)-L-histidine" + - compartment: "c" + - formula: "C10H16N4O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "caphis" - chebi: "CHEBI:17144" - kegg.compound: "C04441" - metanetx.chemical: "MNXM3804" - sbo: "SBO:0000247" - - !!omap - - id: "s_0144" - - name: "2-[3-carboxy-3-(methylammonio)propyl]-L-histidine" - - compartment: "c" - - formula: "C11H18N4O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0144" + - name: "2-[3-carboxy-3-(methylammonio)propyl]-L-histidine" + - compartment: "c" + - formula: "C11H18N4O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "cmaphis" - chebi: "CHEBI:57784" - kegg.compound: "C04692" - metanetx.chemical: "MNXM3805" - sbo: "SBO:0000247" - - !!omap - - id: "s_0145" - - name: "2-acetamido-5-oxopentanoate" - - compartment: "m" - - formula: "C7H10NO4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0145" + - name: "2-acetamido-5-oxopentanoate" + - compartment: "m" + - formula: "C7H10NO4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "acg5sa" - chebi: "CHEBI:29123" - kegg.compound: "C01250" - metanetx.chemical: "MNXM1062" - sbo: "SBO:0000247" - - !!omap - - id: "s_0146" - - name: "2-acetyllactic acid" - - compartment: "m" - - formula: "C5H7O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0146" + - name: "2-acetyllactic acid" + - compartment: "m" + - formula: "C5H7O4" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:57774" - kegg.compound: "C00900" - metanetx.chemical: "MNXM426" - sbo: "SBO:0000247" - - !!omap - - id: "s_0147" - - name: "2-amino-3-carboxymuconate-6-semialdehyde" - - compartment: "c" - - formula: "C7H6NO5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0147" + - name: "2-amino-3-carboxymuconate-6-semialdehyde" + - compartment: "c" + - formula: "C7H6NO5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "cmusa" - chebi: "CHEBI:29044" - kegg.compound: "C04409" - metanetx.chemical: "MNXM1372" - sbo: "SBO:0000247" - - !!omap - - id: "s_0148" - - name: "2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-ol" - - compartment: "m" - - formula: "C7H9N5O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0148" + - name: "2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-ol" + - compartment: "m" + - formula: "C7H9N5O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "6hmhpt" - chebi: "CHEBI:17083" - kegg.compound: "C01300" - metanetx.chemical: "MNXM937" - sbo: "SBO:0000247" - - !!omap - - id: "s_0149" - - name: "2-dehydropantoate" - - compartment: "c" - - formula: "C6H9O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0149" + - name: "2-dehydropantoate" + - compartment: "c" + - formula: "C6H9O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "2dhp" - chebi: "CHEBI:11561" - kegg.compound: "C00966" - metanetx.chemical: "MNXM959" - sbo: "SBO:0000247" - - !!omap - - id: "s_0150" - - name: "2-dehydropantoate" - - compartment: "m" - - formula: "C6H9O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0150" + - name: "2-dehydropantoate" + - compartment: "m" + - formula: "C6H9O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "2dhp" - chebi: "CHEBI:11561" - kegg.compound: "C00966" - metanetx.chemical: "MNXM959" - sbo: "SBO:0000247" - - !!omap - - id: "s_0152" - - name: "2-deoxy-D-ribose" - - compartment: "c" - - formula: "C5H10O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0152" + - name: "2-deoxy-D-ribose" + - compartment: "c" + - formula: "C5H10O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "drib" - chebi: "CHEBI:28816" - kegg.compound: "C01801" - metanetx.chemical: "MNXM2474" - sbo: "SBO:0000247" - - !!omap - - id: "s_0153" - - name: "2-deoxy-D-ribose 5-phosphate" - - compartment: "c" - - formula: "C5H9O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0153" + - name: "2-deoxy-D-ribose 5-phosphate" + - compartment: "c" + - formula: "C5H9O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "2dr5p" - chebi: "CHEBI:57651" - kegg.compound: "C00673" - metanetx.chemical: "MNXM2179" - sbo: "SBO:0000247" - - !!omap - - id: "s_0154" - - name: "2-hexaprenyl-5-hydroxy-6-methoxy-3-methyl-1,4-benzoquinone" - - compartment: "m" - - formula: "C38H56O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0154" + - name: "2-hexaprenyl-5-hydroxy-6-methoxy-3-methyl-1,4-benzoquinone" + - compartment: "m" + - formula: "C38H56O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2hpmhmbq" - chebi: "CHEBI:28753" - kegg.compound: "C05805" - metanetx.chemical: "MNXM5466" - sbo: "SBO:0000247" - - !!omap - - id: "s_0155" - - name: "2-hexaprenyl-6-methoxy-1,4-benzoquinone" - - compartment: "m" - - formula: "C37H54O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0155" + - name: "2-hexaprenyl-6-methoxy-1,4-benzoquinone" + - compartment: "m" + - formula: "C37H54O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2hp6mbq" - chebi: "CHEBI:27752" - kegg.compound: "C05803" - metanetx.chemical: "MNXM6707" - sbo: "SBO:0000247" - - !!omap - - id: "s_0156" - - name: "2-hexaprenyl-6-methoxy-3-methyl-1,4-benzoquinone" - - compartment: "m" - - formula: "C38H56O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0156" + - name: "2-hexaprenyl-6-methoxy-3-methyl-1,4-benzoquinone" + - compartment: "m" + - formula: "C38H56O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2hpmmbq" - chebi: "CHEBI:28711" - kegg.compound: "C05804" - metanetx.chemical: "MNXM6067" - sbo: "SBO:0000247" - - !!omap - - id: "s_0157" - - name: "2-hexaprenyl-6-methoxyphenol" - - compartment: "m" - - formula: "C37H56O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0157" + - name: "2-hexaprenyl-6-methoxyphenol" + - compartment: "m" + - formula: "C37H56O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2hp6mp" - chebi: "CHEBI:1109" - kegg.compound: "C05802" - metanetx.chemical: "MNXM4291" - sbo: "SBO:0000247" - - !!omap - - id: "s_0158" - - name: "2-hydroxy-3-oxobutyl phosphate" - - compartment: "c" - - formula: "C4H7O6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0158" + - name: "2-hydroxy-3-oxobutyl phosphate" + - compartment: "c" + - formula: "C4H7O6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "db4p" - chebi: "CHEBI:50606" - kegg.compound: "C15556" - metanetx.chemical: "MNXM2323" - sbo: "SBO:0000247" - - !!omap - - id: "s_0161" - - name: "2-hydroxyhexadecanal" - - compartment: "er" - - formula: "C16H32O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0161" + - name: "2-hydroxyhexadecanal" + - compartment: "er" + - formula: "C16H32O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2hhxdal" - chebi: "CHEBI:50626" - metanetx.chemical: "MNXM35167" - sbo: "SBO:0000247" - - !!omap - - id: "s_0162" - - name: "2-isopropylmalate" - - compartment: "c" - - formula: "C7H10O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0162" + - name: "2-isopropylmalate" + - compartment: "c" + - formula: "C7H10O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "3c3hmp" - chebi: "CHEBI:28107" - kegg.compound: "C02504" - metanetx.chemical: "MNXM164143" - sbo: "SBO:0000247" - - !!omap - - id: "s_0163" - - name: "2-isopropylmalate" - - compartment: "e" - - formula: "C7H10O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0163" + - name: "2-isopropylmalate" + - compartment: "e" + - formula: "C7H10O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "3c3hmp" - chebi: "CHEBI:28107" - kegg.compound: "C02504" - metanetx.chemical: "MNXM164143" - sbo: "SBO:0000247" - - !!omap - - id: "s_0164" - - name: "2-isopropylmalate" - - compartment: "m" - - formula: "C7H10O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0164" + - name: "2-isopropylmalate" + - compartment: "m" + - formula: "C7H10O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "3c3hmp" - chebi: "CHEBI:28107" - kegg.compound: "C02504" - metanetx.chemical: "MNXM164143" - sbo: "SBO:0000247" - - !!omap - - id: "s_0165" - - name: "2-isopropylmaleic acid" - - compartment: "c" - - formula: "C7H8O4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0165" + - name: "2-isopropylmaleic acid" + - compartment: "c" + - formula: "C7H8O4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "2ippm" - chebi: "CHEBI:58085" - kegg.compound: "C02631" - metanetx.chemical: "MNXM1706" - sbo: "SBO:0000247" - - !!omap - - id: "s_0166" - - name: "2-methylbutanal" - - compartment: "c" - - formula: "C5H10O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0166" + - name: "2-methylbutanal" + - compartment: "c" + - formula: "C5H10O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2mbald" - chebi: "CHEBI:16182" - kegg.compound: "C02223" - metanetx.chemical: "MNXM2604" - sbo: "SBO:0000247" - - !!omap - - id: "s_0167" - - name: "2-methylbutanal" - - compartment: "e" - - formula: "C5H10O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0167" + - name: "2-methylbutanal" + - compartment: "e" + - formula: "C5H10O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2mbald" - chebi: "CHEBI:16182" - kegg.compound: "C02223" - metanetx.chemical: "MNXM2604" - sbo: "SBO:0000247" - - !!omap - - id: "s_0168" - - name: "2-methylbutanal" - - compartment: "m" - - formula: "C5H10O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0168" + - name: "2-methylbutanal" + - compartment: "m" + - formula: "C5H10O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2mbald" - chebi: "CHEBI:16182" - kegg.compound: "C02223" - metanetx.chemical: "MNXM2604" - sbo: "SBO:0000247" - - !!omap - - id: "s_0169" - - name: "2-methylbutanol" - - compartment: "c" - - formula: "C5H12O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0169" + - name: "2-methylbutanol" + - compartment: "c" + - formula: "C5H12O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2mbtoh" - chebi: "CHEBI:48945" - metanetx.chemical: "MNXM5476" - sbo: "SBO:0000247" - - !!omap - - id: "s_0170" - - name: "2-methylbutanol" - - compartment: "e" - - formula: "C5H12O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0170" + - name: "2-methylbutanol" + - compartment: "e" + - formula: "C5H12O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2mbtoh" - chebi: "CHEBI:48945" - metanetx.chemical: "MNXM5476" - sbo: "SBO:0000247" - - !!omap - - id: "s_0171" - - name: "2-methylbutanol" - - compartment: "m" - - formula: "C5H12O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0171" + - name: "2-methylbutanol" + - compartment: "m" + - formula: "C5H12O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2mbtoh" - chebi: "CHEBI:48945" - metanetx.chemical: "MNXM5476" - sbo: "SBO:0000247" - - !!omap - - id: "s_0172" - - name: "2-methylbutyl acetate" - - compartment: "c" - - formula: "C7H14O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0172" + - name: "2-methylbutyl acetate" + - compartment: "c" + - formula: "C7H14O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2mbac" - chebi: "CHEBI:50585" - metanetx.chemical: "MNXM35277" - sbo: "SBO:0000247" - - !!omap - - id: "s_0173" - - name: "2-methylbutyl acetate" - - compartment: "e" - - formula: "C7H14O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0173" + - name: "2-methylbutyl acetate" + - compartment: "e" + - formula: "C7H14O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2mbac" - chebi: "CHEBI:50585" - metanetx.chemical: "MNXM35277" - sbo: "SBO:0000247" - - !!omap - - id: "s_0174" - - name: "2-methylcitrate" - - compartment: "m" - - formula: "C7H7O7" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0174" + - name: "2-methylcitrate" + - compartment: "m" + - formula: "C7H7O7" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "2mcit" - chebi: "CHEBI:15598" - kegg.compound: "C02225" - metanetx.chemical: "MNXM90279" - sbo: "SBO:0000247" - - !!omap - - id: "s_0176" - - name: "2-oxoadipic acid" - - compartment: "c" - - formula: "C6H6O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0176" + - name: "2-oxoadipic acid" + - compartment: "c" + - formula: "C6H6O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "2oxoadp" - chebi: "CHEBI:57499" - kegg.compound: "C00322" - metanetx.chemical: "MNXM263" - sbo: "SBO:0000247" - - !!omap - - id: "s_0177" - - name: "2-oxoadipic acid" - - compartment: "m" - - formula: "C6H6O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0177" + - name: "2-oxoadipic acid" + - compartment: "m" + - formula: "C6H6O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "2oxoadp" - chebi: "CHEBI:57499" - kegg.compound: "C00322" - metanetx.chemical: "MNXM263" - sbo: "SBO:0000247" - - !!omap - - id: "s_0178" - - name: "2-oxobutanoate" - - compartment: "c" - - formula: "C4H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0178" + - name: "2-oxobutanoate" + - compartment: "c" + - formula: "C4H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "2obut" - chebi: "CHEBI:16763" - kegg.compound: "C00109" - metanetx.chemical: "MNXM159" - sbo: "SBO:0000247" - - !!omap - - id: "s_0179" - - name: "2-oxobutanoate" - - compartment: "m" - - formula: "C4H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0179" + - name: "2-oxobutanoate" + - compartment: "m" + - formula: "C4H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "2obut" - chebi: "CHEBI:16763" - kegg.compound: "C00109" - metanetx.chemical: "MNXM159" - sbo: "SBO:0000247" - - !!omap - - id: "s_0180" - - name: "2-oxoglutarate" - - compartment: "c" - - formula: "C5H4O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0180" + - name: "2-oxoglutarate" + - compartment: "c" + - formula: "C5H4O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "akg" - chebi: "CHEBI:16810" - kegg.compound: "C00026" - metanetx.chemical: "MNXM20" - sbo: "SBO:0000247" - - !!omap - - id: "s_0181" - - name: "2-oxoglutarate" - - compartment: "e" - - formula: "C5H4O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0181" + - name: "2-oxoglutarate" + - compartment: "e" + - formula: "C5H4O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "akg" - chebi: "CHEBI:16810" - kegg.compound: "C00026" - metanetx.chemical: "MNXM20" - sbo: "SBO:0000247" - - !!omap - - id: "s_0182" - - name: "2-oxoglutarate" - - compartment: "m" - - formula: "C5H4O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0182" + - name: "2-oxoglutarate" + - compartment: "m" + - formula: "C5H4O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "akg" - chebi: "CHEBI:16810" - kegg.compound: "C00026" - metanetx.chemical: "MNXM20" - sbo: "SBO:0000247" - - !!omap - - id: "s_0183" - - name: "2-oxoglutarate" - - compartment: "n" - - formula: "C5H4O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0183" + - name: "2-oxoglutarate" + - compartment: "n" + - formula: "C5H4O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "akg" - chebi: "CHEBI:16810" - kegg.compound: "C00026" - metanetx.chemical: "MNXM20" - sbo: "SBO:0000247" - - !!omap - - id: "s_0184" - - name: "2-oxoglutarate" - - compartment: "p" - - formula: "C5H4O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0184" + - name: "2-oxoglutarate" + - compartment: "p" + - formula: "C5H4O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "akg" - chebi: "CHEBI:16810" - kegg.compound: "C00026" - metanetx.chemical: "MNXM20" - sbo: "SBO:0000247" - - !!omap - - id: "s_0185" - - name: "2-phenylethanol" - - compartment: "c" - - formula: "C8H10O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0185" + - name: "2-phenylethanol" + - compartment: "c" + - formula: "C8H10O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2phetoh" - chebi: "CHEBI:49000" - kegg.compound: "C05853" - metanetx.chemical: "MNXM2476" - sbo: "SBO:0000247" - - !!omap - - id: "s_0186" - - name: "2-phenylethanol" - - compartment: "e" - - formula: "C8H10O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0186" + - name: "2-phenylethanol" + - compartment: "e" + - formula: "C8H10O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2phetoh" - chebi: "CHEBI:49000" - kegg.compound: "C05853" - metanetx.chemical: "MNXM2476" - sbo: "SBO:0000247" - - !!omap - - id: "s_0187" - - name: "2-phenylethanol" - - compartment: "m" - - formula: "C8H10O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0187" + - name: "2-phenylethanol" + - compartment: "m" + - formula: "C8H10O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "2phetoh" - chebi: "CHEBI:49000" - kegg.compound: "C05853" - metanetx.chemical: "MNXM2476" - sbo: "SBO:0000247" - - !!omap - - id: "s_0188" - - name: "2-phospho-D-glyceric acid" - - compartment: "c" - - formula: "C3H4O7P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0188" + - name: "2-phospho-D-glyceric acid" + - compartment: "c" + - formula: "C3H4O7P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "2pg" - chebi: "CHEBI:58289" - kegg.compound: "C00631" - metanetx.chemical: "MNXM275" - sbo: "SBO:0000247" - - !!omap - - id: "s_0189" - - name: "geranylgeranyl diphosphate" - - compartment: "c" - - formula: "C20H33O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0189" + - name: "geranylgeranyl diphosphate" + - compartment: "c" + - formula: "C20H33O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "ggdp" - chebi: "CHEBI:58756" - kegg.compound: "C00353" - metanetx.chemical: "MNXM139" - sbo: "SBO:0000247" - - !!omap - - id: "s_0190" - - name: "farnesyl diphosphate" - - compartment: "c" - - formula: "C15H25O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0190" + - name: "farnesyl diphosphate" + - compartment: "c" + - formula: "C15H25O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "frdp" - chebi: "CHEBI:175763" - kegg.compound: "C00448" - metanetx.chemical: "MNXM34" - sbo: "SBO:0000247" - - !!omap - - id: "s_0191" - - name: "farnesyl diphosphate" - - compartment: "m" - - formula: "C15H25O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0191" + - name: "farnesyl diphosphate" + - compartment: "m" + - formula: "C15H25O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "frdp" - chebi: "CHEBI:175763" - kegg.compound: "C00448" - metanetx.chemical: "MNXM34" - sbo: "SBO:0000247" - - !!omap - - id: "s_0192" - - name: "3',5'-cyclic AMP" - - compartment: "c" - - formula: "C10H11N5O6P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0192" + - name: "3',5'-cyclic AMP" + - compartment: "c" + - formula: "C10H11N5O6P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "camp" - chebi: "CHEBI:58165" - kegg.compound: "C00575" - metanetx.chemical: "MNXM243" - sbo: "SBO:0000247" - - !!omap - - id: "s_0193" - - name: "3',5'-cyclic CMP" - - compartment: "c" - - formula: "C9H11N3O7P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0193" + - name: "3',5'-cyclic CMP" + - compartment: "c" + - formula: "C9H11N3O7P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "35ccmp" - chebi: "CHEBI:58003" - kegg.compound: "C00941" - metanetx.chemical: "MNXM3162" - sbo: "SBO:0000247" - - !!omap - - id: "s_0194" - - name: "3',5'-cyclic dAMP" - - compartment: "c" - - formula: "C10H11N5O5P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0194" + - name: "3',5'-cyclic dAMP" + - compartment: "c" + - formula: "C10H11N5O5P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "35cdamp" - chebi: "CHEBI:28074" - kegg.compound: "C00968" - metanetx.chemical: "MNXM9931" - sbo: "SBO:0000247" - - !!omap - - id: "s_0195" - - name: "3',5'-cyclic GMP" - - compartment: "c" - - formula: "C10H11N5O7P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0195" + - name: "3',5'-cyclic GMP" + - compartment: "c" + - formula: "C10H11N5O7P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "35cgmp" - chebi: "CHEBI:57746" - kegg.compound: "C00942" - metanetx.chemical: "MNXM665" - sbo: "SBO:0000247" - - !!omap - - id: "s_0196" - - name: "3',5'-cyclic IMP" - - compartment: "c" - - formula: "C10H10N4O7P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0196" + - name: "3',5'-cyclic IMP" + - compartment: "c" + - formula: "C10H10N4O7P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "35cimp" - chebi: "CHEBI:27541" - kegg.compound: "C00943" - metanetx.chemical: "MNXM9932" - sbo: "SBO:0000247" - - !!omap - - id: "s_0197" - - name: "3'-dephospho-CoA" - - compartment: "c" - - formula: "C21H33N7O13P2S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0197" + - name: "3'-dephospho-CoA" + - compartment: "c" + - formula: "C21H33N7O13P2S" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "dpcoa" - chebi: "CHEBI:57328" - kegg.compound: "C00882" - metanetx.chemical: "MNXM481" - sbo: "SBO:0000247" - - !!omap - - id: "s_0200" - - name: "3'-dephospho-CoA" - - compartment: "m" - - formula: "C21H33N7O13P2S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0200" + - name: "3'-dephospho-CoA" + - compartment: "m" + - formula: "C21H33N7O13P2S" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "dpcoa" - chebi: "CHEBI:57328" - kegg.compound: "C00882" - metanetx.chemical: "MNXM481" - sbo: "SBO:0000247" - - !!omap - - id: "s_0201" - - name: "3'-phospho-5'-adenylyl sulfate" - - compartment: "c" - - formula: "C10H11N5O13P2S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0201" + - name: "3'-phospho-5'-adenylyl sulfate" + - compartment: "c" + - formula: "C10H11N5O13P2S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "paps" - chebi: "CHEBI:58339" - kegg.compound: "C00053" - metanetx.chemical: "MNXM49" - sbo: "SBO:0000247" - - !!omap - - id: "s_0204" - - name: "3-(4-hydroxyphenyl)pyruvate" - - compartment: "c" - - formula: "C9H7O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0204" + - name: "3-(4-hydroxyphenyl)pyruvate" + - compartment: "c" + - formula: "C9H7O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "34hpp" - chebi: "CHEBI:36242" - kegg.compound: "C01179" - metanetx.chemical: "MNXM153" - sbo: "SBO:0000247" - - !!omap - - id: "s_0206" - - name: "3-(4-hydroxyphenyl)pyruvate" - - compartment: "p" - - formula: "C9H7O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0206" + - name: "3-(4-hydroxyphenyl)pyruvate" + - compartment: "p" + - formula: "C9H7O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "34hpp" - chebi: "CHEBI:36242" - kegg.compound: "C01179" - metanetx.chemical: "MNXM153" - sbo: "SBO:0000247" - - !!omap - - id: "s_0207" - - name: "3-(imidazol-4-yl)-2-oxopropyl dihydrogen phosphate" - - compartment: "c" - - formula: "C6H7N2O5P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0207" + - name: "3-(imidazol-4-yl)-2-oxopropyl dihydrogen phosphate" + - compartment: "c" + - formula: "C6H7N2O5P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "imacp" - chebi: "CHEBI:57766" - kegg.compound: "C01267" - metanetx.chemical: "MNXM1456" - sbo: "SBO:0000247" - - !!omap - - id: "s_0208" - - name: "3-aminopropanal" - - compartment: "c" - - formula: "C3H8NO" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0208" + - name: "3-aminopropanal" + - compartment: "c" + - formula: "C3H8NO" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "aproa" - chebi: "CHEBI:58374" - kegg.compound: "C02229" - metanetx.chemical: "MNXM493" - sbo: "SBO:0000247" - - !!omap - - id: "s_0209" - - name: "3-dehydro-4-methylzymosterol" - - compartment: "c" - - formula: "C28H44O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0209" + - name: "3-dehydro-4-methylzymosterol" + - compartment: "c" + - formula: "C28H44O" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:50593" - kegg.compound: "C15816" - metanetx.chemical: "MNXM36392" - sbo: "SBO:0000247" - - !!omap - - id: "s_0210" - - name: "3-dehydroquinate" - - compartment: "c" - - formula: "C7H9O6" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0210" + - name: "3-dehydroquinate" + - compartment: "c" + - formula: "C7H9O6" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3dhq" - chebi: "CHEBI:32364" - kegg.compound: "C00944" - metanetx.chemical: "MNXM478" - sbo: "SBO:0000247" - - !!omap - - id: "s_0211" - - name: "3-dehydroshikimate" - - compartment: "c" - - formula: "C7H7O5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0211" + - name: "3-dehydroshikimate" + - compartment: "c" + - formula: "C7H7O5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3dhsk" - chebi: "CHEBI:16630" - kegg.compound: "C02637" - metanetx.chemical: "MNXM611" - sbo: "SBO:0000247" - - !!omap - - id: "s_0212" - - name: "3-hexaprenyl-4,5-dihydroxybenzoic acid" - - compartment: "c" - - formula: "C37H53O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0212" + - name: "3-hexaprenyl-4,5-dihydroxybenzoic acid" + - compartment: "c" + - formula: "C37H53O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3dh5hpb" - chebi: "CHEBI:58373" - kegg.compound: "C05200" - metanetx.chemical: "MNXM2783" - sbo: "SBO:0000247" - - !!omap - - id: "s_0213" - - name: "3-hexaprenyl-4,5-dihydroxybenzoic acid" - - compartment: "m" - - formula: "C37H53O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0213" + - name: "3-hexaprenyl-4,5-dihydroxybenzoic acid" + - compartment: "m" + - formula: "C37H53O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3dh5hpb" - chebi: "CHEBI:58373" - kegg.compound: "C05200" - metanetx.chemical: "MNXM2783" - sbo: "SBO:0000247" - - !!omap - - id: "s_0214" - - name: "3-hexaprenyl-4-hydroxy-5-methoxybenzoic acid" - - compartment: "m" - - formula: "C38H55O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0214" + - name: "3-hexaprenyl-4-hydroxy-5-methoxybenzoic acid" + - compartment: "m" + - formula: "C38H55O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3hph5mb" - chebi: "CHEBI:57916" - kegg.compound: "C05313" - metanetx.chemical: "MNXM3166" - sbo: "SBO:0000247" - - !!omap - - id: "s_0215" - - name: "3-hexaprenyl-4-hydroxybenzoic acid" - - compartment: "c" - - formula: "C37H53O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0215" + - name: "3-hexaprenyl-4-hydroxybenzoic acid" + - compartment: "c" + - formula: "C37H53O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3ophb_5" - chebi: "CHEBI:31116" - kegg.compound: "C13425" - metanetx.chemical: "MNXM3167" - sbo: "SBO:0000247" - - !!omap - - id: "s_0216" - - name: "3-hexaprenyl-4-hydroxybenzoic acid" - - compartment: "m" - - formula: "C37H53O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0216" + - name: "3-hexaprenyl-4-hydroxybenzoic acid" + - compartment: "m" + - formula: "C37H53O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3ophb_5" - chebi: "CHEBI:31116" - kegg.compound: "C13425" - metanetx.chemical: "MNXM3167" - sbo: "SBO:0000247" - - !!omap - - id: "s_0217" - - name: "3-hydroxy-2-isopropyl-4-methoxy-4-oxobutanoate" - - compartment: "c" - - formula: "C8H13O5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0217" + - name: "3-hydroxy-2-isopropyl-4-methoxy-4-oxobutanoate" + - compartment: "c" + - formula: "C8H13O5" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:52960" - metanetx.chemical: "MNXM36486" - sbo: "SBO:0000247" - - !!omap - - id: "s_0218" - - name: "3-hydroxy-3-methylglutaryl-CoA" - - compartment: "c" - - formula: "C27H39N7O20P3S" - - charge: -5 - - annotation: !!omap + - !!omap + - id: "s_0218" + - name: "3-hydroxy-3-methylglutaryl-CoA" + - compartment: "c" + - formula: "C27H39N7O20P3S" + - charge: -5 + - annotation: !!omap - bigg.metabolite: "hmgcoa" - chebi: "CHEBI:11814" - kegg.compound: "C00356" - metanetx.chemical: "MNXM197" - sbo: "SBO:0000247" - - !!omap - - id: "s_0221" - - name: "3-hydroxy-3-methylglutaryl-CoA" - - compartment: "m" - - formula: "C27H39N7O20P3S" - - charge: -5 - - annotation: !!omap + - !!omap + - id: "s_0221" + - name: "3-hydroxy-3-methylglutaryl-CoA" + - compartment: "m" + - formula: "C27H39N7O20P3S" + - charge: -5 + - annotation: !!omap - bigg.metabolite: "hmgcoa" - chebi: "CHEBI:11814" - kegg.compound: "C00356" - metanetx.chemical: "MNXM197" - sbo: "SBO:0000247" - - !!omap - - id: "s_0222" - - name: "3-hydroxy-L-kynurenine" - - compartment: "c" - - formula: "C10H12N2O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0222" + - name: "3-hydroxy-L-kynurenine" + - compartment: "c" + - formula: "C10H12N2O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "hLkynr" - chebi: "CHEBI:17380" - kegg.compound: "C03227" - metanetx.chemical: "MNXM576" - sbo: "SBO:0000247" - - !!omap - - id: "s_0224" - - name: "3-hydroxyanthranilate" - - compartment: "c" - - formula: "C7H6NO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0224" + - name: "3-hydroxyanthranilate" + - compartment: "c" + - formula: "C7H6NO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3hanthrn" - chebi: "CHEBI:36559" - kegg.compound: "C00632" - metanetx.chemical: "MNXM359" - sbo: "SBO:0000247" - - !!omap - - id: "s_0229" - - name: "3-hydroxyoctadecanoyl-CoA" - - compartment: "p" - - formula: "C39H66N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0229" + - name: "3-hydroxyoctadecanoyl-CoA" + - compartment: "p" + - formula: "C39H66N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "CE2248" - chebi: "CHEBI:50583" - kegg.compound: "C16217" - metanetx.chemical: "MNXM1309" - sbo: "SBO:0000247" - - !!omap - - id: "s_0231" - - name: "3-ketosphinganine" - - compartment: "er" - - formula: "C18H38NO2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0231" + - name: "3-ketosphinganine" + - compartment: "er" + - formula: "C18H38NO2" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "3dsphgn" - chebi: "CHEBI:58299" - kegg.compound: "C02934" - metanetx.chemical: "MNXM559" - sbo: "SBO:0000247" - - !!omap - - id: "s_0232" - - name: "3-methyl-2-oxobutanoate" - - compartment: "c" - - formula: "C5H7O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0232" + - name: "3-methyl-2-oxobutanoate" + - compartment: "c" + - formula: "C5H7O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3mob" - chebi: "CHEBI:11851" - kegg.compound: "C00141" - metanetx.chemical: "MNXM238" - sbo: "SBO:0000247" - - !!omap - - id: "s_0233" - - name: "3-methyl-2-oxobutanoate" - - compartment: "m" - - formula: "C5H7O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0233" + - name: "3-methyl-2-oxobutanoate" + - compartment: "m" + - formula: "C5H7O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3mob" - chebi: "CHEBI:11851" - kegg.compound: "C00141" - metanetx.chemical: "MNXM238" - sbo: "SBO:0000247" - - !!omap - - id: "s_0234" - - name: "3-methylbutanal" - - compartment: "c" - - formula: "C5H10O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0234" + - name: "3-methylbutanal" + - compartment: "c" + - formula: "C5H10O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "3mbald" - chebi: "CHEBI:16638" - kegg.compound: "C07329" - metanetx.chemical: "MNXM5280" - sbo: "SBO:0000247" - - !!omap - - id: "s_0235" - - name: "3-methylbutanal" - - compartment: "e" - - formula: "C5H10O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0235" + - name: "3-methylbutanal" + - compartment: "e" + - formula: "C5H10O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "3mbald" - chebi: "CHEBI:16638" - kegg.compound: "C07329" - metanetx.chemical: "MNXM5280" - sbo: "SBO:0000247" - - !!omap - - id: "s_0236" - - name: "3-methylbutanal" - - compartment: "m" - - formula: "C5H10O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0236" + - name: "3-methylbutanal" + - compartment: "m" + - formula: "C5H10O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "3mbald" - chebi: "CHEBI:16638" - kegg.compound: "C07329" - metanetx.chemical: "MNXM5280" - sbo: "SBO:0000247" - - !!omap - - id: "s_0239" - - name: "3-oxodecanoyl-CoA" - - compartment: "p" - - formula: "C31H48N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0239" + - name: "3-oxodecanoyl-CoA" + - compartment: "p" + - formula: "C31H48N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3odcoa" - chebi: "CHEBI:28528" - kegg.compound: "C05265" - metanetx.chemical: "MNXM677" - sbo: "SBO:0000247" - - !!omap - - id: "s_0243" - - name: "3-oxohexacosanoyl-CoA" - - compartment: "p" - - formula: "C47H80N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0243" + - name: "3-oxohexacosanoyl-CoA" + - compartment: "p" + - formula: "C47H80N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3ohxccoa" - chebi: "CHEBI:52977" - metanetx.chemical: "MNXM36758" - sbo: "SBO:0000247" - - !!omap - - id: "s_0247" - - name: "3-oxolauroyl-CoA" - - compartment: "p" - - formula: "C33H52N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0247" + - name: "3-oxolauroyl-CoA" + - compartment: "p" + - formula: "C33H52N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3oddcoa" - chebi: "CHEBI:27868" - kegg.compound: "C05263" - metanetx.chemical: "MNXM705" - sbo: "SBO:0000247" - - !!omap - - id: "s_0250" - - name: "3-oxooctadecanoyl-CoA" - - compartment: "p" - - formula: "C39H64N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0250" + - name: "3-oxooctadecanoyl-CoA" + - compartment: "p" + - formula: "C39H64N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3ohodcoa" - chebi: "CHEBI:50571" - kegg.compound: "C16216" - metanetx.chemical: "MNXM513" - sbo: "SBO:0000247" - - !!omap - - id: "s_0253" - - name: "3-oxopalmitoyl-CoA" - - compartment: "p" - - formula: "C37H60N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0253" + - name: "3-oxopalmitoyl-CoA" + - compartment: "p" + - formula: "C37H60N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3ohdcoa" - chebi: "CHEBI:57349" - kegg.compound: "C05259" - metanetx.chemical: "MNXM738" - sbo: "SBO:0000247" - - !!omap - - id: "s_0257" - - name: "3-oxotetradecanoyl-CoA" - - compartment: "p" - - formula: "C35H56N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0257" + - name: "3-oxotetradecanoyl-CoA" + - compartment: "p" + - formula: "C35H56N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3otdcoa" - chebi: "CHEBI:28726" - kegg.compound: "C05261" - metanetx.chemical: "MNXM707" - sbo: "SBO:0000247" - - !!omap - - id: "s_0258" - - name: "3-phospho-hydroxypyruvate" - - compartment: "c" - - formula: "C3H2O7P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0258" + - name: "3-phospho-hydroxypyruvate" + - compartment: "c" + - formula: "C3H2O7P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "3php" - chebi: "CHEBI:18110" - kegg.compound: "C03232" - metanetx.chemical: "MNXM541" - sbo: "SBO:0000247" - - !!omap - - id: "s_0259" - - name: "3-phospho-serine" - - compartment: "c" - - formula: "C3H6NO6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0259" + - name: "3-phospho-serine" + - compartment: "c" + - formula: "C3H6NO6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pser__L" - chebi: "CHEBI:57524" - kegg.compound: "C01005" - metanetx.chemical: "MNXM379" - sbo: "SBO:0000247" - - !!omap - - id: "s_0260" - - name: "3-phosphonato-D-glycerate(3-)" - - compartment: "c" - - formula: "C3H4O7P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0260" + - name: "3-phosphonato-D-glycerate(3-)" + - compartment: "c" + - formula: "C3H4O7P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "3pg" - chebi: "CHEBI:58272" - kegg.compound: "C00197" - metanetx.chemical: "MNXM126" - sbo: "SBO:0000247" - - !!omap - - id: "s_0261" - - name: "3-phosphoshikimic acid" - - compartment: "c" - - formula: "C7H8O8P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0261" + - name: "3-phosphoshikimic acid" + - compartment: "c" + - formula: "C7H8O8P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "skm5p" - chebi: "CHEBI:145989" - kegg.compound: "C03175" - metanetx.chemical: "MNXM1265" - sbo: "SBO:0000247" - - !!omap - - id: "s_0262" - - name: "4,4-dimethyl-5alpha-cholesta-8,14,24-trien-3beta-ol" - - compartment: "c" - - formula: "C29H46O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0262" + - name: "4,4-dimethyl-5alpha-cholesta-8,14,24-trien-3beta-ol" + - compartment: "c" + - formula: "C29H46O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "44mctr" - chebi: "CHEBI:17813" - kegg.compound: "C11455" - metanetx.chemical: "MNXM1036" - sbo: "SBO:0000247" - - !!omap - - id: "s_0263" - - name: "4,5-bis(diphospho)-1D-myo-inositol tetrakisphosphate" - - compartment: "c" - - formula: "C6H7O30P8" - - charge: -13 - - annotation: !!omap + - !!omap + - id: "s_0263" + - name: "4,5-bis(diphospho)-1D-myo-inositol tetrakisphosphate" + - compartment: "c" + - formula: "C6H7O30P8" + - charge: -13 + - annotation: !!omap - chebi: "CHEBI:53066" - metanetx.chemical: "MNXM484827" - sbo: "SBO:0000247" - - !!omap - - id: "s_0264" - - name: "4-(phosphonooxy)-L-threonine" - - compartment: "c" - - formula: "C4H8NO7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0264" + - name: "4-(phosphonooxy)-L-threonine" + - compartment: "c" + - formula: "C4H8NO7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "phthr" - chebi: "CHEBI:58452" - kegg.compound: "C06055" - metanetx.chemical: "MNXM759" - sbo: "SBO:0000247" - - !!omap - - id: "s_0267" - - name: "4-amino-2-methyl-5-diphosphomethylpyrimidine" - - compartment: "c" - - formula: "C6H8N3O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0267" + - name: "4-amino-2-methyl-5-diphosphomethylpyrimidine" + - compartment: "c" + - formula: "C6H8N3O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "2mahmp" - chebi: "CHEBI:57841" - kegg.compound: "C04752" - metanetx.chemical: "MNXM1135" - sbo: "SBO:0000247" - - !!omap - - id: "s_0268" - - name: "4-amino-2-methyl-5-phosphomethylpyrimidine" - - compartment: "c" - - formula: "C6H8N3O4P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0268" + - name: "4-amino-2-methyl-5-phosphomethylpyrimidine" + - compartment: "c" + - formula: "C6H8N3O4P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "4ampm" - chebi: "CHEBI:58354" - kegg.compound: "C04556" - metanetx.chemical: "MNXM790" - sbo: "SBO:0000247" - - !!omap - - id: "s_0269" - - name: "4-amino-4-deoxychorismate" - - compartment: "c" - - formula: "C10H10NO5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0269" + - name: "4-amino-4-deoxychorismate" + - compartment: "c" + - formula: "C10H10NO5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "4adcho" - chebi: "CHEBI:35181" - kegg.compound: "C11355" - metanetx.chemical: "MNXM1458" - sbo: "SBO:0000247" - - !!omap - - id: "s_0270" - - name: "4-amino-5-hydroxymethyl-2-methylpyrimidine" - - compartment: "c" - - formula: "C6H9N3O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0270" + - name: "4-amino-5-hydroxymethyl-2-methylpyrimidine" + - compartment: "c" + - formula: "C6H9N3O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "4ahmmp" - chebi: "CHEBI:16892" - kegg.compound: "C01279" - metanetx.chemical: "MNXM874" - sbo: "SBO:0000247" - - !!omap - - id: "s_0271" - - name: "4-aminobenzoate" - - compartment: "c" - - formula: "C7H6NO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0271" + - name: "4-aminobenzoate" + - compartment: "c" + - formula: "C7H6NO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "4abz" - chebi: "CHEBI:17836" - kegg.compound: "C00568" - metanetx.chemical: "MNXM421" - sbo: "SBO:0000247" - - !!omap - - id: "s_0272" - - name: "4-aminobenzoate" - - compartment: "e" - - formula: "C7H6NO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0272" + - name: "4-aminobenzoate" + - compartment: "e" + - formula: "C7H6NO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "4abz" - chebi: "CHEBI:17836" - kegg.compound: "C00568" - metanetx.chemical: "MNXM421" - sbo: "SBO:0000247" - - !!omap - - id: "s_0273" - - name: "4-aminobenzoate" - - compartment: "m" - - formula: "C7H6NO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0273" + - name: "4-aminobenzoate" + - compartment: "m" + - formula: "C7H6NO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "4abz" - chebi: "CHEBI:17836" - kegg.compound: "C00568" - metanetx.chemical: "MNXM421" - sbo: "SBO:0000247" - - !!omap - - id: "s_0274" - - name: "4-aminobutanal" - - compartment: "c" - - formula: "C4H10NO" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0274" + - name: "4-aminobutanal" + - compartment: "c" + - formula: "C4H10NO" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "4abutn" - chebi: "CHEBI:58264" - kegg.compound: "C00555" - metanetx.chemical: "MNXM422" - sbo: "SBO:0000247" - - !!omap - - id: "s_0275" - - name: "4-aminobutanal" - - compartment: "m" - - formula: "C4H10NO" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0275" + - name: "4-aminobutanal" + - compartment: "m" + - formula: "C4H10NO" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "4abutn" - chebi: "CHEBI:58264" - kegg.compound: "C00555" - metanetx.chemical: "MNXM422" - sbo: "SBO:0000247" - - !!omap - - id: "s_0279" - - name: "4-diphospho-1D-myo-inositol pentakisphosphate" - - compartment: "c" - - formula: "C6H6O27P7" - - charge: -13 - - annotation: !!omap + - !!omap + - id: "s_0279" + - name: "4-diphospho-1D-myo-inositol pentakisphosphate" + - compartment: "c" + - formula: "C6H6O27P7" + - charge: -13 + - annotation: !!omap - chebi: "CHEBI:53064" - kegg.compound: "C11526" - metanetx.chemical: "MNXM1715" - sbo: "SBO:0000247" - - !!omap - - id: "s_0280" - - name: "4-guanidinobutanamide" - - compartment: "c" - - formula: "C5H13N4O" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0280" + - name: "4-guanidinobutanamide" + - compartment: "c" + - formula: "C5H13N4O" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "4gudbd" - chebi: "CHEBI:58365" - kegg.compound: "C03078" - metanetx.chemical: "MNXM2617" - sbo: "SBO:0000247" - - !!omap - - id: "s_0281" - - name: "4-guanidinobutanoic acid" - - compartment: "c" - - formula: "C5H11N3O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0281" + - name: "4-guanidinobutanoic acid" + - compartment: "c" + - formula: "C5H11N3O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "4gudbutn" - chebi: "CHEBI:15728" - kegg.compound: "C01035" - metanetx.chemical: "MNXM1312" - sbo: "SBO:0000247" - - !!omap - - id: "s_0282" - - name: "4-hydroxy-2-oxoglutarate" - - compartment: "c" - - formula: "C5H4O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0282" + - name: "4-hydroxy-2-oxoglutarate" + - compartment: "c" + - formula: "C5H4O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "4h2oglt" - chebi: "CHEBI:17742" - kegg.compound: "C01127" - metanetx.chemical: "MNXM894" - sbo: "SBO:0000247" - - !!omap - - id: "s_0283" - - name: "4-hydroxy-2-oxoglutarate" - - compartment: "m" - - formula: "C5H4O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0283" + - name: "4-hydroxy-2-oxoglutarate" + - compartment: "m" + - formula: "C5H4O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "4h2oglt" - chebi: "CHEBI:17742" - kegg.compound: "C01127" - metanetx.chemical: "MNXM894" - sbo: "SBO:0000247" - - !!omap - - id: "s_0284" - - name: "4-hydroxy-2-oxoglutarate" - - compartment: "p" - - formula: "C5H4O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0284" + - name: "4-hydroxy-2-oxoglutarate" + - compartment: "p" + - formula: "C5H4O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "4h2oglt" - chebi: "CHEBI:17742" - kegg.compound: "C01127" - metanetx.chemical: "MNXM894" - sbo: "SBO:0000247" - - !!omap - - id: "s_0285" - - name: "4-hydroxy-L-threonine" - - compartment: "c" - - formula: "C4H9NO4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0285" + - name: "4-hydroxy-L-threonine" + - compartment: "c" + - formula: "C4H9NO4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "4hthr" - chebi: "CHEBI:28330" - kegg.compound: "C06056" - metanetx.chemical: "MNXM1802" - sbo: "SBO:0000247" - - !!omap - - id: "s_0286" - - name: "4-hydroxybenzoate" - - compartment: "c" - - formula: "C7H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0286" + - name: "4-hydroxybenzoate" + - compartment: "c" + - formula: "C7H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "4hbz" - chebi: "CHEBI:17879" - kegg.compound: "C00156" - metanetx.chemical: "MNXM164" - sbo: "SBO:0000247" - - !!omap - - id: "s_0287" - - name: "4-hydroxybenzoate" - - compartment: "m" - - formula: "C7H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0287" + - name: "4-hydroxybenzoate" + - compartment: "m" + - formula: "C7H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "4hbz" - chebi: "CHEBI:17879" - kegg.compound: "C00156" - metanetx.chemical: "MNXM164" - sbo: "SBO:0000247" - - !!omap - - id: "s_0290" - - name: "4-hydroxybenzoyl-CoA" - - compartment: "m" - - formula: "C28H36N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0290" + - name: "4-hydroxybenzoyl-CoA" + - compartment: "m" + - formula: "C28H36N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "4hbzcoa" - chebi: "CHEBI:57356" - kegg.compound: "C02949" - metanetx.chemical: "MNXM739" - sbo: "SBO:0000247" - - !!omap - - id: "s_0291" - - name: "4-methyl-2-oxopentanoate" - - compartment: "c" - - formula: "C6H9O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0291" + - name: "4-methyl-2-oxopentanoate" + - compartment: "c" + - formula: "C6H9O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "4mop" - chebi: "CHEBI:17865" - kegg.compound: "C00233" - metanetx.chemical: "MNXM404" - sbo: "SBO:0000247" - - !!omap - - id: "s_0292" - - name: "4-methyl-2-oxopentanoate" - - compartment: "m" - - formula: "C6H9O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0292" + - name: "4-methyl-2-oxopentanoate" + - compartment: "m" + - formula: "C6H9O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "4mop" - chebi: "CHEBI:17865" - kegg.compound: "C00233" - metanetx.chemical: "MNXM404" - sbo: "SBO:0000247" - - !!omap - - id: "s_0293" - - name: "4-methyl-5-(2-phosphonooxyethyl)thiazole" - - compartment: "c" - - formula: "C6H8NO4PS" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0293" + - name: "4-methyl-5-(2-phosphonooxyethyl)thiazole" + - compartment: "c" + - formula: "C6H8NO4PS" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "4mpetz" - chebi: "CHEBI:58296" - kegg.compound: "C04327" - metanetx.chemical: "MNXM960" - sbo: "SBO:0000247" - - !!omap - - id: "s_0294" - - name: "4-methylthio-2-oxobutanoate" - - compartment: "c" - - formula: "C5H7O3S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0294" + - name: "4-methylthio-2-oxobutanoate" + - compartment: "c" + - formula: "C5H7O3S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "4met2obut" - chebi: "CHEBI:16723" - kegg.compound: "C01180" - metanetx.chemical: "MNXM276" - sbo: "SBO:0000247" - - !!omap - - id: "s_0295" - - name: "4-phospho-L-aspartate" - - compartment: "c" - - formula: "C4H6NO7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0295" + - name: "4-phospho-L-aspartate" + - compartment: "c" + - formula: "C4H6NO7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "4pasp" - chebi: "CHEBI:30407" - kegg.compound: "C03082" - metanetx.chemical: "MNXM1177" - sbo: "SBO:0000247" - - !!omap - - id: "s_0296" - - name: "4alpha-methylzymosterol" - - compartment: "c" - - formula: "C28H46O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0296" + - name: "4alpha-methylzymosterol" + - compartment: "c" + - formula: "C28H46O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "4mzym" - chebi: "CHEBI:1949" - kegg.compound: "C05103" - metanetx.chemical: "MNXM1804" - sbo: "SBO:0000247" - - !!omap - - id: "s_0297" - - name: "4beta-methylzymosterol-4alpha-carboxylic acid" - - compartment: "c" - - formula: "C29H45O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0297" + - name: "4beta-methylzymosterol-4alpha-carboxylic acid" + - compartment: "c" + - formula: "C29H45O3" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:50591" - kegg.compound: "C15808" - metanetx.chemical: "MNXM37762" - sbo: "SBO:0000247" - - !!omap - - id: "s_0298" - - name: "5'-adenylyl sulfate" - - compartment: "c" - - formula: "C10H12N5O10PS" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0298" + - name: "5'-adenylyl sulfate" + - compartment: "c" + - formula: "C10H12N5O10PS" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "aps" - chebi: "CHEBI:58243" - kegg.compound: "C00224" - metanetx.chemical: "MNXM287" - sbo: "SBO:0000247" - - !!omap - - id: "s_0299" - - name: "5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole" - - compartment: "c" - - formula: "C13H15N4O12P" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0299" + - name: "5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole" + - compartment: "c" + - formula: "C13H15N4O12P" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "25aics" - chebi: "CHEBI:58443" - kegg.compound: "C04823" - metanetx.chemical: "MNXM607" - sbo: "SBO:0000247" - - !!omap - - id: "s_0300" - - name: "5'-phosphoribosyl-5-aminoimidazole" - - compartment: "c" - - formula: "C8H13N3O7P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0300" + - name: "5'-phosphoribosyl-5-aminoimidazole" + - compartment: "c" + - formula: "C8H13N3O7P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "air" - chebi: "CHEBI:58592" - kegg.compound: "C03373" - metanetx.chemical: "MNXM388" - sbo: "SBO:0000247" - - !!omap - - id: "s_0301" - - name: "5'-phosphoribosyl-N-formylglycineamide" - - compartment: "c" - - formula: "C8H13N2O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0301" + - name: "5'-phosphoribosyl-N-formylglycineamide" + - compartment: "c" + - formula: "C8H13N2O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "fgam" - chebi: "CHEBI:58426" - kegg.compound: "C04376" - metanetx.chemical: "MNXM453" - sbo: "SBO:0000247" - - !!omap - - id: "s_0302" - - name: "5'-phosphoribosyl-N-formylglycineamidine" - - compartment: "c" - - formula: "C8H15N3O8P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0302" + - name: "5'-phosphoribosyl-N-formylglycineamidine" + - compartment: "c" + - formula: "C8H15N3O8P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "fpram" - chebi: "CHEBI:58478" - kegg.compound: "C04640" - metanetx.chemical: "MNXM568" - sbo: "SBO:0000247" - - !!omap - - id: "s_0303" - - name: "5'-S-methyl-5'-thioadenosine" - - compartment: "c" - - formula: "C11H15N5O3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0303" + - name: "5'-S-methyl-5'-thioadenosine" + - compartment: "c" + - formula: "C11H15N5O3S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "5mta" - chebi: "CHEBI:17509" - kegg.compound: "C00170" - metanetx.chemical: "MNXM150" - sbo: "SBO:0000247" - - !!omap - - id: "s_0304" - - name: "5,10-methenyl-THF" - - compartment: "c" - - formula: "C20H20N7O6" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0304" + - name: "5,10-methenyl-THF" + - compartment: "c" + - formula: "C20H20N7O6" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "methf" - chebi: "CHEBI:57455" - kegg.compound: "C00445" - metanetx.chemical: "MNXM511" - sbo: "SBO:0000247" - - !!omap - - id: "s_0305" - - name: "5,10-methenyl-THF" - - compartment: "m" - - formula: "C20H20N7O6" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0305" + - name: "5,10-methenyl-THF" + - compartment: "m" + - formula: "C20H20N7O6" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "methf" - chebi: "CHEBI:57455" - kegg.compound: "C00445" - metanetx.chemical: "MNXM511" - sbo: "SBO:0000247" - - !!omap - - id: "s_0306" - - name: "5,10-methylenetetrahydrofolate" - - compartment: "c" - - formula: "C20H21N7O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0306" + - name: "5,10-methylenetetrahydrofolate" + - compartment: "c" + - formula: "C20H21N7O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mlthf" - chebi: "CHEBI:12071" - kegg.compound: "C00143" - metanetx.chemical: "MNXM183" - sbo: "SBO:0000247" - - !!omap - - id: "s_0307" - - name: "5,10-methylenetetrahydrofolate" - - compartment: "m" - - formula: "C20H21N7O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0307" + - name: "5,10-methylenetetrahydrofolate" + - compartment: "m" + - formula: "C20H21N7O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mlthf" - chebi: "CHEBI:12071" - kegg.compound: "C00143" - metanetx.chemical: "MNXM183" - sbo: "SBO:0000247" - - !!omap - - id: "s_0308" - - name: "5,6,7,8-tetrahydrofolyl-L-glutamic acid" - - compartment: "c" - - formula: "C24H27N8O9" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0308" + - name: "5,6,7,8-tetrahydrofolyl-L-glutamic acid" + - compartment: "c" + - formula: "C24H27N8O9" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "thfglu" - chebi: "CHEBI:27650" - kegg.compound: "C09332" - metanetx.chemical: "MNXM723480" - sbo: "SBO:0000247" - - !!omap - - id: "s_0309" - - name: "5,6-bis(diphospho)-1D-myo-inositol tetrakisphosphate" - - compartment: "c" - - formula: "C6H7O30P8" - - charge: -13 - - annotation: !!omap + - !!omap + - id: "s_0309" + - name: "5,6-bis(diphospho)-1D-myo-inositol tetrakisphosphate" + - compartment: "c" + - formula: "C6H7O30P8" + - charge: -13 + - annotation: !!omap - chebi: "CHEBI:52965" - metanetx.chemical: "MNXM487477" - sbo: "SBO:0000247" - - !!omap - - id: "s_0310" - - name: "5-(2-hydroxyethyl)-4-methylthiazole" - - compartment: "c" - - formula: "C6H9NOS" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0310" + - name: "5-(2-hydroxyethyl)-4-methylthiazole" + - compartment: "c" + - formula: "C6H9NOS" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "4mhetz" - chebi: "CHEBI:17957" - kegg.compound: "C04294" - metanetx.chemical: "MNXM962" - sbo: "SBO:0000247" - - !!omap - - id: "s_0311" - - name: "5-(methylsulfanyl)-2,3-dioxopentyl phosphate" - - compartment: "c" - - formula: "C6H9O6PS" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0311" + - name: "5-(methylsulfanyl)-2,3-dioxopentyl phosphate" + - compartment: "c" + - formula: "C6H9O6PS" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "dkmpp" - chebi: "CHEBI:58828" - kegg.compound: "C15650" - metanetx.chemical: "MNXM162358" - sbo: "SBO:0000247" - - !!omap - - id: "s_0312" - - name: "5-[(5-phospho-1-deoxy-D-ribulos-1-ylamino)methylideneamino]-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide" - - compartment: "c" - - formula: "C15H21N5O15P2" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0312" + - name: "5-[(5-phospho-1-deoxy-D-ribulos-1-ylamino)methylideneamino]-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide" + - compartment: "c" + - formula: "C15H21N5O15P2" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "prlp" - chebi: "CHEBI:58525" - kegg.compound: "C04916" - metanetx.chemical: "MNXM1408" - sbo: "SBO:0000247" - - !!omap - - id: "s_0313" - - name: "5-amino-6-(5-phosphoribitylamino)uracil" - - compartment: "c" - - formula: "C9H15N4O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0313" + - name: "5-amino-6-(5-phosphoribitylamino)uracil" + - compartment: "c" + - formula: "C9H15N4O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "5aprbu" - chebi: "CHEBI:58421" - kegg.compound: "C04454" - metanetx.chemical: "MNXM1178" - sbo: "SBO:0000247" - - !!omap - - id: "s_0314" - - name: "5-amino-6-(D-ribitylamino)uracil" - - compartment: "c" - - formula: "C9H16N4O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0314" + - name: "5-amino-6-(D-ribitylamino)uracil" + - compartment: "c" + - formula: "C9H16N4O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "4r5au" - chebi: "CHEBI:15934" - kegg.compound: "C04732" - metanetx.chemical: "MNXM791" - sbo: "SBO:0000247" - - !!omap - - id: "s_0315" - - name: "5-aminolevulinate" - - compartment: "c" - - formula: "C5H9NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0315" + - name: "5-aminolevulinate" + - compartment: "c" + - formula: "C5H9NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "5aop" - chebi: "CHEBI:17549" - kegg.compound: "C00430" - metanetx.chemical: "MNXM405" - sbo: "SBO:0000247" - - !!omap - - id: "s_0316" - - name: "5-aminolevulinate" - - compartment: "e" - - formula: "C5H9NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0316" + - name: "5-aminolevulinate" + - compartment: "e" + - formula: "C5H9NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "5aop" - chebi: "CHEBI:17549" - kegg.compound: "C00430" - metanetx.chemical: "MNXM405" - sbo: "SBO:0000247" - - !!omap - - id: "s_0317" - - name: "5-aminolevulinate" - - compartment: "m" - - formula: "C5H9NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0317" + - name: "5-aminolevulinate" + - compartment: "m" + - formula: "C5H9NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "5aop" - chebi: "CHEBI:17549" - kegg.compound: "C00430" - metanetx.chemical: "MNXM405" - sbo: "SBO:0000247" - - !!omap - - id: "s_0318" - - name: "5-diphospho-1D-myo-inositol pentakisphosphate" - - compartment: "c" - - formula: "C6H6O27P7" - - charge: -13 - - annotation: !!omap + - !!omap + - id: "s_0318" + - name: "5-diphospho-1D-myo-inositol pentakisphosphate" + - compartment: "c" + - formula: "C6H6O27P7" + - charge: -13 + - annotation: !!omap - bigg.metabolite: "ppmi12346p" - chebi: "CHEBI:58628" - kegg.compound: "C11526" - metanetx.chemical: "MNXM1715" - sbo: "SBO:0000247" - - !!omap - - id: "s_0319" - - name: "5-formyltetrahydrofolic acid" - - compartment: "c" - - formula: "C20H21N7O7" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0319" + - name: "5-formyltetrahydrofolic acid" + - compartment: "c" + - formula: "C20H21N7O7" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "5fthf" - chebi: "CHEBI:57457" - kegg.compound: "C03479" - metanetx.chemical: "MNXM1392" - sbo: "SBO:0000247" - - !!omap - - id: "s_0320" - - name: "5-formyltetrahydrofolic acid" - - compartment: "e" - - formula: "C20H21N7O7" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0320" + - name: "5-formyltetrahydrofolic acid" + - compartment: "e" + - formula: "C20H21N7O7" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "5fthf" - chebi: "CHEBI:57457" - kegg.compound: "C03479" - metanetx.chemical: "MNXM1392" - sbo: "SBO:0000247" - - !!omap - - id: "s_0321" - - name: "5-formyltetrahydrofolic acid" - - compartment: "m" - - formula: "C20H21N7O7" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0321" + - name: "5-formyltetrahydrofolic acid" + - compartment: "m" + - formula: "C20H21N7O7" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "5fthf" - chebi: "CHEBI:57457" - kegg.compound: "C03479" - metanetx.chemical: "MNXM1392" - sbo: "SBO:0000247" - - !!omap - - id: "s_0322" - - name: "5-methyltetrahydrofolate" - - compartment: "c" - - formula: "C20H23N7O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0322" + - name: "5-methyltetrahydrofolate" + - compartment: "c" + - formula: "C20H23N7O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "5mthf" - chebi: "CHEBI:18608" - kegg.compound: "C00440" - metanetx.chemical: "MNXM318" - sbo: "SBO:0000247" - - !!omap - - id: "s_0323" - - name: "5-methyltetrahydropteroyltri-L-glutamic acid" - - compartment: "c" - - formula: "C30H35N9O12" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0323" + - name: "5-methyltetrahydropteroyltri-L-glutamic acid" + - compartment: "c" + - formula: "C30H35N9O12" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "mhpglu" - chebi: "CHEBI:58207" - kegg.compound: "C04489" - metanetx.chemical: "MNXM2623" - sbo: "SBO:0000247" - - !!omap - - id: "s_0324" - - name: "5-O-(1-carboxyvinyl)-3-phosphoshikimic acid" - - compartment: "c" - - formula: "C10H9O10P" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0324" + - name: "5-O-(1-carboxyvinyl)-3-phosphoshikimic acid" + - compartment: "c" + - formula: "C10H9O10P" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3psme" - chebi: "CHEBI:57701" - kegg.compound: "C01269" - metanetx.chemical: "MNXM1365" - sbo: "SBO:0000247" - - !!omap - - id: "s_0325" - - name: "5-phospho-ribosyl-glycineamide" - - compartment: "c" - - formula: "C7H14N2O8P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0325" + - name: "5-phospho-ribosyl-glycineamide" + - compartment: "c" + - formula: "C7H14N2O8P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "gar" - chebi: "CHEBI:58457" - kegg.compound: "C03838" - metanetx.chemical: "MNXM463" - sbo: "SBO:0000247" - - !!omap - - id: "s_0326" - - name: "5-phosphoribosyl-ATP" - - compartment: "c" - - formula: "C15H19N5O20P4" - - charge: -6 - - annotation: !!omap + - !!omap + - id: "s_0326" + - name: "5-phosphoribosyl-ATP" + - compartment: "c" + - formula: "C15H19N5O20P4" + - charge: -6 + - annotation: !!omap - bigg.metabolite: "prbatp" - chebi: "CHEBI:58424" - kegg.compound: "C02739" - metanetx.chemical: "MNXM1351" - sbo: "SBO:0000247" - - !!omap - - id: "s_0327" - - name: "5-phosphoribosylamine" - - compartment: "c" - - formula: "C5H11NO7P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0327" + - name: "5-phosphoribosylamine" + - compartment: "c" + - formula: "C5H11NO7P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "pram" - chebi: "CHEBI:58681" - kegg.compound: "C03090" - metanetx.chemical: "MNXM90003" - sbo: "SBO:0000247" - - !!omap - - id: "s_0328" - - name: "6,7-dimethyl-8-(1-D-ribityl)lumazine" - - compartment: "c" - - formula: "C13H17N4O6" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0328" + - name: "6,7-dimethyl-8-(1-D-ribityl)lumazine" + - compartment: "c" + - formula: "C13H17N4O6" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "dmlz" - chebi: "CHEBI:58201" - kegg.compound: "C04332" - metanetx.chemical: "MNXM1313" - sbo: "SBO:0000247" - - !!omap - - id: "s_0329" - - name: "6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol" - - compartment: "er" - - formula: "C17H28NO17PR2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0329" + - name: "6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol" + - compartment: "er" + - formula: "C17H28NO17PR2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "gpail_hs" - chebi: "CHEBI:17049" - kegg.compound: "C04248" - metanetx.chemical: "MNXM1411" - sbo: "SBO:0000247" - - !!omap - - id: "s_0330" - - name: "6-(alpha-D-glucosaminyl)-O-acyl-1-phosphatidyl-1D-myo-inositol" - - compartment: "er" - - formula: "" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0330" + - name: "6-(alpha-D-glucosaminyl)-O-acyl-1-phosphatidyl-1D-myo-inositol" + - compartment: "er" + - formula: "" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:53055" - metanetx.chemical: "MNXM38512" - sbo: "SBO:0000247" - - !!omap - - id: "s_0331" - - name: "6-(N-acetyl-alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol" - - compartment: "er" - - formula: "C19H30NO18PR2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0331" + - name: "6-(N-acetyl-alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol" + - compartment: "er" + - formula: "C19H30NO18PR2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "acgpail_hs" - chebi: "CHEBI:57265" - kegg.compound: "C01288" - metanetx.chemical: "MNXM999" - sbo: "SBO:0000247" - - !!omap - - id: "s_0332" - - name: "6-[6-(2-aminoethylphosphoryl)-alpha-mannosyl-(1->6)-2-(2-aminoethylphosphoryl)-alpha-mannosyl-(1->6)-alpha-2-(2-aminoethylphosphoryl)mannosyl-(1->4)-alpha-glucosaminyl]-O-acyl-1-phosphatidyl-1D-myo-inositol" - - compartment: "er" - - formula: "C43H44N9O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0332" + - name: "6-[6-(2-aminoethylphosphoryl)-alpha-mannosyl-(1->6)-2-(2-aminoethylphosphoryl)-alpha-mannosyl-(1->6)-alpha-2-(2-aminoethylphosphoryl)mannosyl-(1->4)-alpha-glucosaminyl]-O-acyl-1-phosphatidyl-1D-myo-inositol" + - compartment: "er" + - formula: "C43H44N9O" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:53060" - metanetx.chemical: "MNXM38542" - sbo: "SBO:0000247" - - !!omap - - id: "s_0333" - - name: "6-diphospho-1D-myo-inositol pentakisphosphate" - - compartment: "c" - - formula: "C6H6O27P7" - - charge: -13 - - annotation: !!omap + - !!omap + - id: "s_0333" + - name: "6-diphospho-1D-myo-inositol pentakisphosphate" + - compartment: "c" + - formula: "C6H6O27P7" + - charge: -13 + - annotation: !!omap - chebi: "CHEBI:53065" - kegg.compound: "C11526" - metanetx.chemical: "MNXM1715" - sbo: "SBO:0000247" - - !!omap - - id: "s_0334" - - name: "6-O-[alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl]-O-acyl-1-phosphatidyl-1D-myo-inositol" - - compartment: "er" - - formula: "" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0334" + - name: "6-O-[alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl]-O-acyl-1-phosphatidyl-1D-myo-inositol" + - compartment: "er" + - formula: "" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:53056" - metanetx.chemical: "MNXM1644" - sbo: "SBO:0000247" - - !!omap - - id: "s_0335" - - name: "6-O-phosphono-D-glucono-1,5-lactone" - - compartment: "c" - - formula: "C6H9O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0335" + - name: "6-O-phosphono-D-glucono-1,5-lactone" + - compartment: "c" + - formula: "C6H9O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "6pgl" - chebi: "CHEBI:57955" - kegg.compound: "C01236" - metanetx.chemical: "MNXM429" - sbo: "SBO:0000247" - - !!omap - - id: "s_0337" - - name: "6-O-{2-O-[(2-aminoethyl)phosphoryl]-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl}-O-acyl-1-phosphatidyl-1D-myo-inositol" - - compartment: "er" - - formula: "" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0337" + - name: "6-O-{2-O-[(2-aminoethyl)phosphoryl]-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl}-O-acyl-1-phosphatidyl-1D-myo-inositol" + - compartment: "er" + - formula: "" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:53057" - metanetx.chemical: "MNXM38904" - sbo: "SBO:0000247" - - !!omap - - id: "s_0338" - - name: "6-O-{alpha-D-mannosyl-(1->2)-alpha-D-mannosyl-(1->6)-2-O-[(2-aminoethyl)phosphoryl]-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl}-O-acyl-1-phosphatidyl-1D-myo-inositol" - - compartment: "er" - - formula: "" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0338" + - name: "6-O-{alpha-D-mannosyl-(1->2)-alpha-D-mannosyl-(1->6)-2-O-[(2-aminoethyl)phosphoryl]-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl}-O-acyl-1-phosphatidyl-1D-myo-inositol" + - compartment: "er" + - formula: "" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:53059" - metanetx.chemical: "MNXM1179" - sbo: "SBO:0000247" - - !!omap - - id: "s_0339" - - name: "6-O-{alpha-D-mannosyl-(1->6)-2-O-[(2-aminoethyl)phosphoryl]-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl}-O-acyl-1-phosphatidyl-1D-myo-inositol" - - compartment: "er" - - formula: "" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0339" + - name: "6-O-{alpha-D-mannosyl-(1->6)-2-O-[(2-aminoethyl)phosphoryl]-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl}-O-acyl-1-phosphatidyl-1D-myo-inositol" + - compartment: "er" + - formula: "" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:53058" - metanetx.chemical: "MNXM1139" - sbo: "SBO:0000247" - - !!omap - - id: "s_0340" - - name: "6-phospho-D-gluconate" - - compartment: "c" - - formula: "C6H10O10P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0340" + - name: "6-phospho-D-gluconate" + - compartment: "c" + - formula: "C6H10O10P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "6pgc" - chebi: "CHEBI:58759" - kegg.compound: "C00345" - metanetx.chemical: "MNXM325" - sbo: "SBO:0000247" - - !!omap - - id: "s_0341" - - name: "7,8-diaminononanoate" - - compartment: "c" - - formula: "C9H21N2O2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0341" + - name: "7,8-diaminononanoate" + - compartment: "c" + - formula: "C9H21N2O2" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "dann" - chebi: "CHEBI:17830" - kegg.compound: "C01037" - metanetx.chemical: "MNXM1140" - sbo: "SBO:0000247" - - !!omap - - id: "s_0342" - - name: "7,8-diaminononanoate" - - compartment: "e" - - formula: "C9H21N2O2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0342" + - name: "7,8-diaminononanoate" + - compartment: "e" + - formula: "C9H21N2O2" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "dann" - chebi: "CHEBI:17830" - kegg.compound: "C01037" - metanetx.chemical: "MNXM1140" - sbo: "SBO:0000247" - - !!omap - - id: "s_0343" - - name: "7,8-dihydroneopterin" - - compartment: "c" - - formula: "C9H13N5O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0343" + - name: "7,8-dihydroneopterin" + - compartment: "c" + - formula: "C9H13N5O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dhnpt" - chebi: "CHEBI:17001" - kegg.compound: "C04874" - metanetx.chemical: "MNXM162359" - sbo: "SBO:0000247" - - !!omap - - id: "s_0344" - - name: "7,8-dihydroneopterin" - - compartment: "m" - - formula: "C9H13N5O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0344" + - name: "7,8-dihydroneopterin" + - compartment: "m" + - formula: "C9H13N5O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dhnpt" - chebi: "CHEBI:17001" - kegg.compound: "C04874" - metanetx.chemical: "MNXM162359" - sbo: "SBO:0000247" - - !!omap - - id: "s_0345" - - name: "7,8-dihydroneopterin 3'-phosphate" - - compartment: "c" - - formula: "C9H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0345" + - name: "7,8-dihydroneopterin 3'-phosphate" + - compartment: "c" + - formula: "C9H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "dhpmp" - chebi: "CHEBI:58762" - kegg.compound: "C05925" - metanetx.chemical: "MNXM1645" - sbo: "SBO:0000247" - - !!omap - - id: "s_0346" - - name: "7,8-dihydroneopterin 3'-triphosphate" - - compartment: "c" - - formula: "C9H12N5O13P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0346" + - name: "7,8-dihydroneopterin 3'-triphosphate" + - compartment: "c" + - formula: "C9H12N5O13P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ahdt" - chebi: "CHEBI:58462" - kegg.compound: "C04895" - metanetx.chemical: "MNXM397" - sbo: "SBO:0000247" - - !!omap - - id: "s_0347" - - name: "7,8-dihydropteroate" - - compartment: "c" - - formula: "C14H13N6O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0347" + - name: "7,8-dihydropteroate" + - compartment: "c" + - formula: "C14H13N6O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "dhpt" - chebi: "CHEBI:17839" - kegg.compound: "C00921" - metanetx.chemical: "MNXM722728" - sbo: "SBO:0000247" - - !!omap - - id: "s_0348" - - name: "7,8-dihydropteroate" - - compartment: "m" - - formula: "C14H13N6O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0348" + - name: "7,8-dihydropteroate" + - compartment: "m" + - formula: "C14H13N6O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "dhpt" - chebi: "CHEBI:17839" - kegg.compound: "C00921" - metanetx.chemical: "MNXM722728" - sbo: "SBO:0000247" - - !!omap - - id: "s_0349" - - name: "7-phospho-2-dehydro-3-deoxy-D-arabino-heptonic acid" - - compartment: "c" - - formula: "C7H10O10P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0349" + - name: "7-phospho-2-dehydro-3-deoxy-D-arabino-heptonic acid" + - compartment: "c" + - formula: "C7H10O10P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "2dda7p" - chebi: "CHEBI:58394" - kegg.compound: "C04691" - metanetx.chemical: "MNXM1219" - sbo: "SBO:0000247" - - !!omap - - id: "s_0350" - - name: "7-phospho-2-dehydro-3-deoxy-D-arabino-heptonic acid" - - compartment: "m" - - formula: "C7H10O10P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0350" + - name: "7-phospho-2-dehydro-3-deoxy-D-arabino-heptonic acid" + - compartment: "m" + - formula: "C7H10O10P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "2dda7p" - chebi: "CHEBI:58394" - kegg.compound: "C04691" - metanetx.chemical: "MNXM1219" - sbo: "SBO:0000247" - - !!omap - - id: "s_0352" - - name: "8-amino-7-oxononanoate" - - compartment: "c" - - formula: "C9H17NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0352" + - name: "8-amino-7-oxononanoate" + - compartment: "c" + - formula: "C9H17NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "8aonn" - chebi: "CHEBI:15830" - kegg.compound: "C01092" - metanetx.chemical: "MNXM1141" - sbo: "SBO:0000247" - - !!omap - - id: "s_0354" - - name: "8-amino-7-oxononanoate" - - compartment: "e" - - formula: "C9H17NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0354" + - name: "8-amino-7-oxononanoate" + - compartment: "e" + - formula: "C9H17NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "8aonn" - chebi: "CHEBI:15830" - kegg.compound: "C01092" - metanetx.chemical: "MNXM1141" - sbo: "SBO:0000247" - - !!omap - - id: "s_0357" - - name: "9H-xanthine" - - compartment: "c" - - formula: "C5H4N4O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0357" + - name: "9H-xanthine" + - compartment: "c" + - formula: "C5H4N4O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "xan" - chebi: "CHEBI:17712" - kegg.compound: "C00385" - metanetx.chemical: "MNXM174" - sbo: "SBO:0000247" - - !!omap - - id: "s_0358" - - name: "9H-xanthine" - - compartment: "e" - - formula: "C5H4N4O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0358" + - name: "9H-xanthine" + - compartment: "e" + - formula: "C5H4N4O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "xan" - chebi: "CHEBI:17712" - kegg.compound: "C00385" - metanetx.chemical: "MNXM174" - sbo: "SBO:0000247" - - !!omap - - id: "s_0359" - - name: "acetaldehyde" - - compartment: "c" - - formula: "C2H4O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0359" + - name: "acetaldehyde" + - compartment: "c" + - formula: "C2H4O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "acald" - chebi: "CHEBI:15343" - kegg.compound: "C00084" - metanetx.chemical: "MNXM75" - sbo: "SBO:0000247" - - !!omap - - id: "s_0360" - - name: "acetaldehyde" - - compartment: "e" - - formula: "C2H4O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0360" + - name: "acetaldehyde" + - compartment: "e" + - formula: "C2H4O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "acald" - chebi: "CHEBI:15343" - kegg.compound: "C00084" - metanetx.chemical: "MNXM75" - sbo: "SBO:0000247" - - !!omap - - id: "s_0361" - - name: "acetaldehyde" - - compartment: "m" - - formula: "C2H4O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0361" + - name: "acetaldehyde" + - compartment: "m" + - formula: "C2H4O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "acald" - chebi: "CHEBI:15343" - kegg.compound: "C00084" - metanetx.chemical: "MNXM75" - sbo: "SBO:0000247" - - !!omap - - id: "s_0362" - - name: "acetate" - - compartment: "c" - - formula: "C2H3O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0362" + - name: "acetate" + - compartment: "c" + - formula: "C2H3O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ac" - chebi: "CHEBI:30089" - kegg.compound: "C00033" - metanetx.chemical: "MNXM26" - sbo: "SBO:0000247" - - !!omap - - id: "s_0363" - - name: "acetate" - - compartment: "er" - - formula: "C2H3O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0363" + - name: "acetate" + - compartment: "er" + - formula: "C2H3O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ac" - chebi: "CHEBI:30089" - kegg.compound: "C00033" - metanetx.chemical: "MNXM26" - sbo: "SBO:0000247" - - !!omap - - id: "s_0364" - - name: "acetate" - - compartment: "e" - - formula: "C2H3O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0364" + - name: "acetate" + - compartment: "e" + - formula: "C2H3O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ac" - chebi: "CHEBI:30089" - kegg.compound: "C00033" - metanetx.chemical: "MNXM26" - sbo: "SBO:0000247" - - !!omap - - id: "s_0365" - - name: "acetate" - - compartment: "m" - - formula: "C2H3O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0365" + - name: "acetate" + - compartment: "m" + - formula: "C2H3O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ac" - chebi: "CHEBI:30089" - 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!!omap + - id: "s_0370" + - name: "acetoacetyl-CoA" + - compartment: "m" + - formula: "C25H36N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "aacoa" - chebi: "CHEBI:57286" - kegg.compound: "C00332" - metanetx.chemical: "MNXM133" - sbo: "SBO:0000247" - - !!omap - - id: "s_0372" - - name: "acetyl-ACP" - - compartment: "m" - - formula: "C2H3OSR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0372" + - name: "acetyl-ACP" + - compartment: "m" + - formula: "C2H3OSR" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "acACP" - chebi: "CHEBI:17093" - kegg.compound: "C03939" - metanetx.chemical: "MNXM1269" - sbo: "SBO:0000247" - - !!omap - - id: "s_0373" - - name: "acetyl-CoA" - - compartment: "c" - - formula: "C23H34N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0373" + - name: "acetyl-CoA" + - compartment: "c" + - formula: "C23H34N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "accoa" - chebi: "CHEBI:57288" - kegg.compound: "C00024" - 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!!omap + - id: "s_0378" + - name: "acetyl-CoA" + - compartment: "p" + - formula: "C23H34N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "accoa" - chebi: "CHEBI:57288" - kegg.compound: "C00024" - metanetx.chemical: "MNXM21" - sbo: "SBO:0000247" - - !!omap - - id: "s_0383" - - name: "adenine" - - compartment: "c" - - formula: "C5H5N5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0383" + - name: "adenine" + - compartment: "c" + - formula: "C5H5N5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ade" - chebi: "CHEBI:16708" - kegg.compound: "C00147" - metanetx.chemical: "MNXM168" - sbo: "SBO:0000247" - - !!omap - - id: "s_0384" - - name: "adenine" - - compartment: "e" - - formula: "C5H5N5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0384" + - name: "adenine" + - compartment: "e" + - formula: "C5H5N5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ade" - chebi: "CHEBI:16708" - kegg.compound: "C00147" - metanetx.chemical: "MNXM168" - sbo: "SBO:0000247" - - !!omap - - id: "s_0385" - - name: "adenine" - - compartment: "m" - - formula: "C5H5N5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0385" + - name: "adenine" + - compartment: "m" + - formula: "C5H5N5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ade" - chebi: "CHEBI:16708" - kegg.compound: "C00147" - metanetx.chemical: "MNXM168" - sbo: "SBO:0000247" - - !!omap - - id: "s_0386" - - name: "adenosine" - - compartment: "c" - - formula: "C10H13N5O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0386" + - name: "adenosine" + - compartment: "c" + - formula: "C10H13N5O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "adn" - chebi: "CHEBI:16335" - kegg.compound: "C00212" - metanetx.chemical: "MNXM212" - sbo: "SBO:0000247" - - !!omap - - id: "s_0387" - - name: "adenosine" - - compartment: "e" - - formula: "C10H13N5O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0387" + - name: "adenosine" + - compartment: "e" + - formula: "C10H13N5O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "adn" - chebi: "CHEBI:16335" - kegg.compound: "C00212" - metanetx.chemical: "MNXM212" - sbo: "SBO:0000247" - - !!omap - - id: "s_0389" - - name: "adenosine 2'-phosphate" - - compartment: "c" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0389" + - name: "adenosine 2'-phosphate" + - compartment: "c" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "amp2p" - chebi: "CHEBI:28223" - kegg.compound: "C00946" - metanetx.chemical: "MNXM7028" - sbo: "SBO:0000247" - - !!omap - - id: "s_0390" - - name: "adenosine 3',5'-bismonophosphate" - - compartment: "c" - - formula: "C10H11N5O10P2" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0390" + - name: "adenosine 3',5'-bismonophosphate" + - compartment: "c" + - formula: "C10H11N5O10P2" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "pap" - chebi: "CHEBI:58343" - kegg.compound: "C00054" - 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- compartment: "c" - - formula: "C14H14N5O11P" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0393" + - name: "adenylo-succinate" + - compartment: "c" + - formula: "C14H14N5O11P" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "dcamp" - chebi: "CHEBI:57567" - kegg.compound: "C03794" - metanetx.chemical: "MNXM565" - sbo: "SBO:0000247" - - !!omap - - id: "s_0394" - - name: "ADP" - - compartment: "c" - - formula: "C10H12N5O10P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0394" + - name: "ADP" + - compartment: "c" + - formula: "C10H12N5O10P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "adp" - chebi: "CHEBI:456216" - kegg.compound: "C00008" - metanetx.chemical: "MNXM7" - sbo: "SBO:0000247" - - !!omap - - id: "s_0395" - - name: "ADP" - - compartment: "er" - - formula: "C10H12N5O10P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0395" + - name: "ADP" + - compartment: "er" + - formula: "C10H12N5O10P2" + - charge: -3 + - annotation: !!omap - 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- annotation: !!omap + - !!omap + - id: "s_0399" + - name: "ADP" + - compartment: "p" + - formula: "C10H12N5O10P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "adp" - chebi: "CHEBI:456216" - kegg.compound: "C00008" - metanetx.chemical: "MNXM7" - sbo: "SBO:0000247" - - !!omap - - id: "s_0402" - - name: "ADP-ribose" - - compartment: "n" - - formula: "C15H21N5O14P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0402" + - name: "ADP-ribose" + - compartment: "n" + - formula: "C15H21N5O14P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "adprib" - chebi: "CHEBI:57967" - kegg.compound: "C00301" - metanetx.chemical: "MNXM48596" - sbo: "SBO:0000247" - - !!omap - - id: "s_0403" - - name: "AICAR" - - compartment: "c" - - formula: "C9H13N4O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0403" + - name: "AICAR" + - compartment: "c" + - formula: "C9H13N4O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "aicar" - chebi: "CHEBI:58475" - kegg.compound: "C04677" - metanetx.chemical: "MNXM365" - sbo: "SBO:0000247" - - !!omap - - id: "s_0404" - - name: "Ala-tRNA(Ala)" - - compartment: "c" - - formula: "C3H7NOR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0404" + - name: "Ala-tRNA(Ala)" + - compartment: "c" + - formula: "C3H7NOR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "alatrna" - chebi: "CHEBI:17732" - kegg.compound: "C00886" - metanetx.chemical: "MNXM89815" - sbo: "SBO:0000247" - - !!omap - - id: "s_0405" - - name: "allantoate" - - compartment: "c" - - formula: "C4H7N4O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0405" + - name: "allantoate" + - compartment: "c" + - formula: "C4H7N4O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "alltt" - chebi: "CHEBI:17536" - kegg.compound: "C00499" - metanetx.chemical: "MNXM584" - sbo: "SBO:0000247" - - !!omap - - id: "s_0406" - - name: "allantoate" - - compartment: "e" - - formula: "C4H7N4O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0406" + - name: "allantoate" + - compartment: "e" + - formula: "C4H7N4O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "alltt" - chebi: "CHEBI:17536" - kegg.compound: "C00499" - metanetx.chemical: "MNXM584" - sbo: "SBO:0000247" - - !!omap - - id: "s_0407" - - name: "allantoin" - - compartment: "c" - - formula: "C4H6N4O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0407" + - name: "allantoin" + - compartment: "c" + - formula: "C4H6N4O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "alltn" - chebi: "CHEBI:15676" - kegg.compound: "C01551" - metanetx.chemical: "MNXM612" - sbo: "SBO:0000247" - - !!omap - - id: "s_0408" - - name: "allantoin" - - compartment: "e" - - formula: "C4H6N4O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0408" + - name: "allantoin" + - compartment: "e" + - formula: "C4H6N4O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "alltn" - chebi: "CHEBI:15676" - kegg.compound: "C01551" - metanetx.chemical: "MNXM612" - 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- charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0411" + - name: "alpha-D-glucosamine 1-phosphate" + - compartment: "c" + - formula: "C6H13NO8P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "gam1p" - chebi: "CHEBI:58516" - kegg.compound: "C06156" - metanetx.chemical: "MNXM969" - sbo: "SBO:0000247" - - !!omap - - id: "s_0412" - - name: "alpha-D-glucosamine 6-phosphate" - - compartment: "c" - - formula: "C6H13NO8P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0412" + - name: "alpha-D-glucosamine 6-phosphate" + - compartment: "c" + - formula: "C6H13NO8P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "gam6p" - chebi: "CHEBI:15873" - kegg.compound: "C00352" - metanetx.chemical: "MNXM370" - sbo: "SBO:0000247" - - !!omap - - id: "s_0413" - - name: "alpha-D-glucosamine 6-phosphate" - - compartment: "e" - - formula: "C6H13NO8P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0413" + - name: "alpha-D-glucosamine 6-phosphate" + - compartment: "e" + - formula: "C6H13NO8P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "gam6p" - chebi: "CHEBI:15873" - kegg.compound: "C00352" - metanetx.chemical: "MNXM370" - sbo: "SBO:0000247" - - !!omap - - id: "s_0414" - - name: "alpha-D-mannosyl-beta-D-mannosyldiacetylchitobiosyldiphosphodolichol" - - compartment: "g" - - formula: "C48H84N2O27P2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0414" + - name: "alpha-D-mannosyl-beta-D-mannosyldiacetylchitobiosyldiphosphodolichol" + - compartment: "g" + - formula: "C48H84N2O27P2" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:28067" - kegg.compound: "C05861" - metanetx.chemical: "MNXM41231" - sbo: "SBO:0000247" - - !!omap - - id: "s_0415" - - name: "alpha-D-ribose 1-phosphate(2-)" - - compartment: "c" - - formula: "C5H9O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0415" + - name: "alpha-D-ribose 1-phosphate(2-)" + - compartment: "c" + - formula: "C5H9O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "r1p" - chebi: "CHEBI:57720" - kegg.compound: "C00620" - metanetx.chemical: "MNXM295" - sbo: "SBO:0000247" - - !!omap - - id: "s_0416" - - name: "alpha-D-ribose 1-phosphate(2-)" - - compartment: "m" - - formula: "C5H9O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0416" + - name: "alpha-D-ribose 1-phosphate(2-)" + - compartment: "m" + - formula: "C5H9O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "r1p" - chebi: "CHEBI:57720" - kegg.compound: "C00620" - metanetx.chemical: "MNXM295" - sbo: "SBO:0000247" - - !!omap - - id: "s_0417" - - name: "aminoacetaldehyde" - - compartment: "c" - - formula: "C2H6NO" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0417" + - name: "aminoacetaldehyde" + - compartment: "c" + - formula: "C2H6NO" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "aacald" - chebi: "CHEBI:58213" - kegg.compound: "C06735" - metanetx.chemical: "MNXM2212" - sbo: "SBO:0000247" - - !!omap - - id: "s_0418" - - name: "aminoacetone" - - compartment: "c" - - formula: "C3H8NO" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0418" + - name: "aminoacetone" + - compartment: "c" + - formula: "C3H8NO" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "aact" - chebi: "CHEBI:58320" - kegg.compound: "C01888" - metanetx.chemical: "MNXM1106" - sbo: "SBO:0000247" - - !!omap - - id: "s_0419" - - name: "ammonium" - - compartment: "c" - - formula: "H4N" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0419" + - name: "ammonium" + - compartment: "c" + - formula: "H4N" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "nh4" - chebi: "CHEBI:28938" - kegg.compound: "C01342" - metanetx.chemical: "MNXM15" - sbo: "SBO:0000247" - - !!omap - - id: "s_0420" - - name: "ammonium" - - compartment: "e" - - formula: "H4N" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0420" + - name: "ammonium" + - compartment: "e" + - formula: "H4N" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "nh4" - chebi: "CHEBI:28938" - kegg.compound: "C01342" - metanetx.chemical: "MNXM15" - sbo: "SBO:0000247" - - !!omap - - id: "s_0421" - - name: "ammonium" - - compartment: "m" - - formula: "H4N" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0421" + - name: "ammonium" + - compartment: "m" + - formula: "H4N" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "nh4" - chebi: "CHEBI:28938" - kegg.compound: "C01342" - metanetx.chemical: "MNXM15" - sbo: "SBO:0000247" - - !!omap - - id: "s_0423" - - name: "AMP" - - compartment: "c" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0423" + - name: "AMP" + - compartment: "c" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "amp" - chebi: "CHEBI:456215" - kegg.compound: "C00020" - metanetx.chemical: "MNXM14" - sbo: "SBO:0000247" - - !!omap - - id: "s_0424" - - name: "AMP" - - compartment: "m" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0424" + - name: "AMP" + - compartment: "m" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "amp" - chebi: "CHEBI:456215" - kegg.compound: "C00020" - metanetx.chemical: "MNXM14" - sbo: "SBO:0000247" - - !!omap - - id: "s_0425" - - name: "AMP" - - compartment: "n" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0425" + - name: "AMP" + - compartment: "n" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "amp" - chebi: "CHEBI:456215" - kegg.compound: "C00020" - metanetx.chemical: "MNXM14" - sbo: "SBO:0000247" - - !!omap - - id: "s_0426" - - name: "AMP" - - compartment: "p" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0426" + - name: "AMP" + - compartment: "p" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "amp" - chebi: "CHEBI:456215" - kegg.compound: "C00020" - metanetx.chemical: "MNXM14" - sbo: "SBO:0000247" - - !!omap - - id: "s_0427" - - name: "anthranilate" - - compartment: "c" - - formula: "C7H6NO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0427" + - name: "anthranilate" + - compartment: "c" + - formula: "C7H6NO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "anth" - chebi: "CHEBI:16567" - kegg.compound: "C00108" - metanetx.chemical: "MNXM188" - sbo: "SBO:0000247" - - !!omap - - id: "s_0428" - - name: "Arg-tRNA(Arg)" - - compartment: "c" - - formula: "C6H15N4OR" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_0428" + - name: "Arg-tRNA(Arg)" + - compartment: "c" + - formula: "C6H15N4OR" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "argtrna" - chebi: "CHEBI:18366" - kegg.compound: "C02163" - metanetx.chemical: "MNXM89870" - sbo: "SBO:0000247" - - !!omap - - id: "s_0429" - - name: "Arg-tRNA(Arg)" - - compartment: "m" - - formula: "C6H15N4OR" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_0429" + - name: "Arg-tRNA(Arg)" + - compartment: "m" + - formula: "C6H15N4OR" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "argtrna" - chebi: "CHEBI:18366" - kegg.compound: "C02163" - metanetx.chemical: "MNXM89870" - sbo: "SBO:0000247" - - !!omap - - id: "s_0430" - - name: "Asn-tRNA(Asn)" - - compartment: "c" - - formula: "C4H8N2O2R" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0430" + - name: "Asn-tRNA(Asn)" + - compartment: "c" + - formula: "C4H8N2O2R" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "asntrna" - chebi: "CHEBI:29265" - kegg.compound: "C03402" - metanetx.chemical: "MNXM89761" - sbo: "SBO:0000247" - - !!omap - - id: "s_0431" - - name: "Asn-tRNA(Asn)" - - compartment: "m" - - formula: "C4H8N2O2R" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0431" + - name: "Asn-tRNA(Asn)" + - compartment: "m" + - formula: "C4H8N2O2R" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "asntrna" - chebi: "CHEBI:29265" - kegg.compound: "C03402" - metanetx.chemical: "MNXM89761" - sbo: "SBO:0000247" - - !!omap - - id: "s_0432" - - name: "Asp-tRNA(Asp)" - - compartment: "c" - - formula: "C4H6NO3R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0432" + - name: "Asp-tRNA(Asp)" + - compartment: "c" + - formula: "C4H6NO3R" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "asptrna" - chebi: "CHEBI:29158" - kegg.compound: "C02984" - metanetx.chemical: "MNXM164570" - sbo: "SBO:0000247" - - !!omap - - id: "s_0433" - - name: "Asp-tRNA(Asp)" - - compartment: "m" - - formula: "C4H6NO3R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0433" + - name: "Asp-tRNA(Asp)" + - compartment: "m" + - formula: "C4H6NO3R" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "asptrna" - chebi: "CHEBI:29158" - kegg.compound: "C02984" - metanetx.chemical: "MNXM164570" - sbo: "SBO:0000247" - - !!omap - - id: "s_0434" - - name: "ATP" - - compartment: "c" - - formula: "C10H12N5O13P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0434" + - name: "ATP" + - compartment: "c" + - formula: "C10H12N5O13P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "atp" - chebi: "CHEBI:30616" - kegg.compound: "C00002" - metanetx.chemical: "MNXM3" - sbo: "SBO:0000247" - - !!omap - - id: "s_0435" - - name: "ATP" - - compartment: "er" - - formula: "C10H12N5O13P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0435" + - name: "ATP" + - compartment: "er" + - formula: "C10H12N5O13P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "atp" - chebi: "CHEBI:30616" - kegg.compound: "C00002" - metanetx.chemical: "MNXM3" - sbo: "SBO:0000247" - - !!omap - - id: "s_0437" - - name: "ATP" - - compartment: "m" - - formula: "C10H12N5O13P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0437" + - name: "ATP" + - compartment: "m" + - formula: "C10H12N5O13P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "atp" - chebi: "CHEBI:30616" - kegg.compound: "C00002" - metanetx.chemical: "MNXM3" - sbo: "SBO:0000247" - - !!omap - - id: "s_0438" - - name: "ATP" - - compartment: "n" - - formula: "C10H12N5O13P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0438" + - name: "ATP" + - compartment: "n" + - formula: "C10H12N5O13P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "atp" - chebi: "CHEBI:30616" - kegg.compound: "C00002" - metanetx.chemical: "MNXM3" - sbo: "SBO:0000247" - - !!omap - - id: "s_0439" - - name: "ATP" - - compartment: "p" - - formula: "C10H12N5O13P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0439" + - name: "ATP" + - compartment: "p" + - formula: "C10H12N5O13P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "atp" - chebi: "CHEBI:30616" - kegg.compound: "C00002" - metanetx.chemical: "MNXM3" - sbo: "SBO:0000247" - - !!omap - - id: "s_0441" - - name: "beta-alanine" - - compartment: "c" - - formula: "C3H7NO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0441" + - name: "beta-alanine" + - compartment: "c" + - formula: "C3H7NO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ala_B" - chebi: "CHEBI:16958" - kegg.compound: "C00099" - metanetx.chemical: "MNXM144" - sbo: "SBO:0000247" - - !!omap - - id: "s_0442" - - name: "beta-D-fructose 2,6-bisphosphate" - - compartment: "c" - - formula: "C6H10O12P2" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0442" + - name: "beta-D-fructose 2,6-bisphosphate" + - compartment: "c" + - formula: "C6H10O12P2" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "f26bp" - chebi: "CHEBI:58579" - kegg.compound: "C00665" - metanetx.chemical: "MNXM651" - sbo: "SBO:0000247" - - !!omap - - id: "s_0443" - - name: "beta-D-mannosyldiacetylchitobiosyldiphosphodolichol" - - compartment: "c" - - formula: "C42H72N2O22P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0443" + - name: "beta-D-mannosyldiacetylchitobiosyldiphosphodolichol" + - compartment: "c" + - formula: "C42H72N2O22P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mpdol" - chebi: "CHEBI:18396" - kegg.compound: "C05860" - metanetx.chemical: "MNXM1078" - sbo: "SBO:0000247" - - !!omap - - id: "s_0444" - - name: "beta-D-mannosyldiacetylchitobiosyldiphosphodolichol" - - compartment: "g" - - formula: "C42H72N2O22P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0444" + - name: "beta-D-mannosyldiacetylchitobiosyldiphosphodolichol" + - compartment: "g" + - formula: "C42H72N2O22P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mpdol" - chebi: "CHEBI:18396" - kegg.compound: "C05860" - metanetx.chemical: "MNXM1078" - sbo: "SBO:0000247" - - !!omap - - id: "s_0445" - - name: "bicarbonate" - - compartment: "c" - - formula: "CHO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0445" + - name: "bicarbonate" + - compartment: "c" + - formula: "CHO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hco3" - chebi: "CHEBI:17544" - kegg.compound: "C00288" - metanetx.chemical: "MNXM60" - sbo: "SBO:0000247" - - !!omap - - id: "s_0446" - - name: "bicarbonate" - - compartment: "e" - - formula: "CHO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0446" + - name: "bicarbonate" + - compartment: "e" + - formula: "CHO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hco3" - chebi: "CHEBI:17544" - kegg.compound: "C00288" - metanetx.chemical: "MNXM60" - sbo: "SBO:0000247" - - !!omap - - id: "s_0447" - - name: "bicarbonate" - - compartment: "m" - - formula: "CHO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0447" + - name: "bicarbonate" + - compartment: "m" + - formula: "CHO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hco3" - chebi: "CHEBI:17544" - kegg.compound: "C00288" - metanetx.chemical: "MNXM60" - sbo: "SBO:0000247" - - !!omap - - id: "s_0448" - - name: "bicarbonate" - - compartment: "n" - - formula: "CHO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0448" + - name: "bicarbonate" + - compartment: "n" + - formula: "CHO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hco3" - chebi: "CHEBI:17544" - kegg.compound: "C00288" - metanetx.chemical: "MNXM60" - sbo: "SBO:0000247" - - !!omap - - id: "s_0450" - - name: "biomass" - - compartment: "c" - - formula: "" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0450" + - name: "biomass" + - compartment: "c" + - formula: "" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "biomass" - sbo: "SBO:0000649" - - !!omap - - id: "s_0451" - - name: "biotin" - - compartment: "c" - - formula: "C10H15N2O3S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0451" + - name: "biotin" + - compartment: "c" + - formula: "C10H15N2O3S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "btn" - chebi: "CHEBI:57586" - kegg.compound: "C00120" - metanetx.chemical: "MNXM304" - sbo: "SBO:0000247" - - !!omap - - id: "s_0452" - - name: "biotin" - - compartment: "e" - - formula: "C10H15N2O3S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0452" + - name: "biotin" + - compartment: "e" + - formula: "C10H15N2O3S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "btn" - chebi: "CHEBI:57586" - kegg.compound: "C00120" - metanetx.chemical: "MNXM304" - sbo: "SBO:0000247" - - !!omap - - id: "s_0453" - - name: "biotinyl-5'-AMP" - - compartment: "c" - - formula: "C20H27N7O9PS" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0453" + - name: "biotinyl-5'-AMP" + - compartment: "c" + - formula: "C20H27N7O9PS" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "btamp" - chebi: "CHEBI:62414" - kegg.compound: "C05921" - metanetx.chemical: "MNXM2351" - sbo: "SBO:0000247" - - !!omap - - id: "s_0454" - - name: "but-1-ene-1,2,4-tricarboxylic acid" - - compartment: "m" - - formula: "C7H5O6" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0454" + - name: "but-1-ene-1,2,4-tricarboxylic acid" + - compartment: "m" + - formula: "C7H5O6" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "b124tc" - chebi: "CHEBI:58174" - kegg.compound: "C04002" - metanetx.chemical: "MNXM920" - sbo: "SBO:0000247" - - !!omap - - id: "s_0455" - - name: "carbamoyl phosphate" - - compartment: "c" - - formula: "CH2NO5P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0455" + - name: "carbamoyl phosphate" + - compartment: "c" + - formula: "CH2NO5P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "cbp" - chebi: "CHEBI:58228" - kegg.compound: "C00169" - metanetx.chemical: "MNXM138" - sbo: "SBO:0000247" - - !!omap - - id: "s_0456" - - name: "carbon dioxide" - - compartment: "c" - - formula: "CO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0456" + - name: "carbon dioxide" + - compartment: "c" + - formula: "CO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "co2" - chebi: "CHEBI:16526" - kegg.compound: "C00011" - metanetx.chemical: "MNXM13" - sbo: "SBO:0000247" - - !!omap - - id: "s_0457" - - name: "carbon dioxide" - - compartment: "er" - - formula: "CO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0457" + - name: "carbon dioxide" + - compartment: "er" + - formula: "CO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "co2" - 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!!omap + - id: "s_0461" + - name: "carbon dioxide" + - compartment: "n" + - formula: "CO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "co2" - chebi: "CHEBI:16526" - kegg.compound: "C00011" - metanetx.chemical: "MNXM13" - sbo: "SBO:0000247" - - !!omap - - id: "s_0462" - - name: "carbon dioxide" - - compartment: "p" - - formula: "CO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0462" + - name: "carbon dioxide" + - compartment: "p" + - formula: "CO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "co2" - chebi: "CHEBI:16526" - kegg.compound: "C00011" - metanetx.chemical: "MNXM13" - sbo: "SBO:0000247" - - !!omap - - id: "s_0465" - - name: "carboxyacetyl-ACP" - - compartment: "m" - - formula: "C3H3O3SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0465" + - name: "carboxyacetyl-ACP" + - compartment: "m" + - formula: "C3H3O3SR" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "malACP" - chebi: "CHEBI:17330" - kegg.compound: "C01209" - 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!!omap + - id: "s_0516" + - name: "cis-aconitate" + - compartment: "c" + - formula: "C6H3O6" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "acon_C" - chebi: "CHEBI:16383" - kegg.compound: "C00417" - metanetx.chemical: "MNXM813" - sbo: "SBO:0000247" - - !!omap - - id: "s_0517" - - name: "cis-aconitate" - - compartment: "m" - - formula: "C6H3O6" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0517" + - name: "cis-aconitate" + - compartment: "m" + - formula: "C6H3O6" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "acon_C" - chebi: "CHEBI:16383" - kegg.compound: "C00417" - metanetx.chemical: "MNXM813" - sbo: "SBO:0000247" - - !!omap - - id: "s_0522" - - name: "citrate" - - compartment: "c" - - formula: "C6H5O7" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0522" + - name: "citrate" + - compartment: "c" + - formula: "C6H5O7" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "cit" - chebi: "CHEBI:16947" - kegg.compound: "C00158" - metanetx.chemical: "MNXM131" - sbo: "SBO:0000247" - - !!omap - - id: "s_0523" - - name: "citrate" - - compartment: "e" - - formula: "C6H5O7" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0523" + - name: "citrate" + - compartment: "e" + - formula: "C6H5O7" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "cit" - chebi: "CHEBI:16947" - kegg.compound: "C00158" - metanetx.chemical: "MNXM131" - sbo: "SBO:0000247" - - !!omap - - id: "s_0524" - - name: "citrate" - - compartment: "m" - - formula: "C6H5O7" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0524" + - name: "citrate" + - compartment: "m" + - formula: "C6H5O7" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "cit" - chebi: "CHEBI:16947" - kegg.compound: "C00158" - metanetx.chemical: "MNXM131" - sbo: "SBO:0000247" - - !!omap - - id: "s_0525" - - name: "citrate" - - compartment: "p" - - formula: "C6H5O7" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0525" + - name: "citrate" + - compartment: "p" + - formula: "C6H5O7" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "cit" - chebi: "CHEBI:16947" - kegg.compound: "C00158" - metanetx.chemical: "MNXM131" - sbo: "SBO:0000247" - - !!omap - - id: "s_0526" - - name: "CMP" - - compartment: "c" - - formula: "C9H12N3O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0526" + - name: "CMP" + - compartment: "c" + - formula: "C9H12N3O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "cmp" - chebi: "CHEBI:60377" - kegg.compound: "C00055" - metanetx.chemical: "MNXM31" - sbo: "SBO:0000247" - - !!omap - - id: "s_0528" - - name: "CMP" - - compartment: "m" - - formula: "C9H12N3O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0528" + - name: "CMP" + - compartment: "m" + - formula: "C9H12N3O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "cmp" - chebi: "CHEBI:60377" - kegg.compound: "C00055" - metanetx.chemical: "MNXM31" - sbo: "SBO:0000247" - - !!omap - - id: "s_0529" - - name: "coenzyme A" - - compartment: "c" - - formula: "C21H32N7O16P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0529" + - name: "coenzyme A" + - compartment: "c" + - formula: "C21H32N7O16P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "coa" - chebi: "CHEBI:57287" - kegg.compound: "C00010" - metanetx.chemical: "MNXM12" - sbo: "SBO:0000247" - - !!omap - - id: "s_0530" - - name: "coenzyme A" - - compartment: "er" - - formula: "C21H32N7O16P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0530" + - name: "coenzyme A" + - compartment: "er" + - formula: "C21H32N7O16P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "coa" - chebi: "CHEBI:57287" - kegg.compound: "C00010" - metanetx.chemical: "MNXM12" - sbo: "SBO:0000247" - - !!omap - - id: "s_0531" - - name: "coenzyme A" - - compartment: "lp" - - formula: "C21H32N7O16P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0531" + - name: "coenzyme A" + - compartment: "lp" + - formula: "C21H32N7O16P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "coa" - chebi: "CHEBI:57287" - kegg.compound: "C00010" - metanetx.chemical: "MNXM12" - sbo: "SBO:0000247" - - !!omap - - id: "s_0532" - - name: "coenzyme A" - - compartment: "m" - - formula: "C21H32N7O16P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0532" + - name: "coenzyme A" + - compartment: "m" + - formula: "C21H32N7O16P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "coa" - chebi: "CHEBI:57287" - kegg.compound: "C00010" - metanetx.chemical: "MNXM12" - sbo: "SBO:0000247" - - !!omap - - id: "s_0533" - - name: "coenzyme A" - - compartment: "n" - - formula: "C21H32N7O16P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0533" + - name: "coenzyme A" + - compartment: "n" + - formula: "C21H32N7O16P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "coa" - chebi: "CHEBI:57287" - kegg.compound: "C00010" - metanetx.chemical: "MNXM12" - sbo: "SBO:0000247" - - !!omap - - id: "s_0534" - - name: "coenzyme A" - - compartment: "p" - - formula: "C21H32N7O16P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0534" + - name: "coenzyme A" + - compartment: "p" + - formula: "C21H32N7O16P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "coa" - chebi: "CHEBI:57287" - kegg.compound: "C00010" - metanetx.chemical: "MNXM12" - sbo: "SBO:0000247" - - !!omap - - id: "s_0538" - - name: "coproporphyrinogen III" - - compartment: "c" - - formula: "C36H40N4O8" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0538" + - name: "coproporphyrinogen III" + - compartment: "c" + - formula: "C36H40N4O8" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "cpppg3" - chebi: "CHEBI:57309" - kegg.compound: "C03263" - metanetx.chemical: "MNXM410" - sbo: "SBO:0000247" - - !!omap - - id: "s_0539" - - name: "CTP" - - compartment: "c" - - formula: "C9H12N3O14P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0539" + - name: "CTP" + - compartment: "c" + - formula: "C9H12N3O14P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ctp" - chebi: "CHEBI:37563" - kegg.compound: "C00063" - metanetx.chemical: "MNXM63" - sbo: "SBO:0000247" - - !!omap - - id: "s_0541" - - name: "CTP" - - compartment: "m" - - formula: "C9H12N3O14P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0541" + - name: "CTP" + - compartment: "m" + - formula: "C9H12N3O14P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ctp" - chebi: "CHEBI:37563" - kegg.compound: "C00063" - metanetx.chemical: "MNXM63" - sbo: "SBO:0000247" - - !!omap - - id: "s_0542" - - name: "Cys-tRNA(Cys)" - - compartment: "c" - - formula: "C3H7NOSR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0542" + - name: "Cys-tRNA(Cys)" + - compartment: "c" + - formula: "C3H7NOSR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "cystrna" - chebi: "CHEBI:29152" - kegg.compound: "C03125" - metanetx.chemical: "MNXM155005" - sbo: "SBO:0000247" - - !!omap - - id: "s_0543" - - name: "cytidine" - - compartment: "c" - - formula: "C9H13N3O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0543" + - name: "cytidine" + - compartment: "c" + - formula: "C9H13N3O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "cytd" - chebi: "CHEBI:17562" - kegg.compound: "C00475" - metanetx.chemical: "MNXM338" - sbo: "SBO:0000247" - - !!omap - - id: "s_0544" - - name: "cytidine" - - compartment: "e" - - formula: "C9H13N3O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0544" + - name: "cytidine" + - compartment: "e" + - formula: "C9H13N3O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "cytd" - chebi: "CHEBI:17562" - kegg.compound: "C00475" - metanetx.chemical: "MNXM338" - sbo: "SBO:0000247" - - !!omap - - id: "s_0545" - - name: "cytosine" - - compartment: "c" - - formula: "C4H5N3O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0545" + - name: "cytosine" + - compartment: "c" + - formula: "C4H5N3O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "csn" - chebi: "CHEBI:16040" - kegg.compound: "C00380" - metanetx.chemical: "MNXM761" - sbo: "SBO:0000247" - - !!omap - - id: "s_0546" - - name: "cytosine" - - compartment: "e" - - formula: "C4H5N3O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0546" + - name: "cytosine" + - compartment: "e" + - formula: "C4H5N3O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "csn" - chebi: "CHEBI:16040" - kegg.compound: "C00380" - metanetx.chemical: "MNXM761" - sbo: "SBO:0000247" - - !!omap - - id: "s_0547" - - name: "D-arabinono-1,4-lactone" - - compartment: "c" - - formula: "C5H8O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0547" + - name: "D-arabinono-1,4-lactone" + - compartment: "c" + - formula: "C5H8O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "Dara14lac" - chebi: "CHEBI:16292" - kegg.compound: "C00652" - metanetx.chemical: "MNXM778" - sbo: "SBO:0000247" - - !!omap - - id: "s_0548" - - name: "D-arabinose" - - compartment: "c" - - formula: "C5H10O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0548" + - name: "D-arabinose" + - compartment: "c" + - formula: "C5H10O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "arab__D" - chebi: "CHEBI:17108" - kegg.compound: "C00216" - metanetx.chemical: "MNXM40571" - sbo: "SBO:0000247" - - !!omap - - id: "s_0549" - - name: "D-arabinose" - - compartment: "e" - - formula: "C5H10O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0549" + - name: "D-arabinose" + - compartment: "e" + - formula: "C5H10O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "arab__D" - chebi: "CHEBI:17108" - kegg.compound: "C00216" - metanetx.chemical: "MNXM40571" - sbo: "SBO:0000247" - - !!omap - - id: "s_0550" - - name: "D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate" - - compartment: "c" - - formula: "C6H9N2O6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0550" + - name: "D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate" + - compartment: "c" + - formula: "C6H9N2O6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "eig3p" - chebi: "CHEBI:58278" - kegg.compound: "C04666" - metanetx.chemical: "MNXM1422" - sbo: "SBO:0000247" - - !!omap - - id: "s_0551" - - name: "D-erythrose 4-phosphate" - - compartment: "c" - - formula: "C4H7O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0551" + - name: "D-erythrose 4-phosphate" + - compartment: "c" + - formula: "C4H7O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "e4p" - chebi: "CHEBI:16897" - kegg.compound: "C00279" - metanetx.chemical: "MNXM258" - sbo: "SBO:0000247" - - !!omap - - id: "s_0552" - - name: "D-erythrose 4-phosphate" - - compartment: "m" - - formula: "C4H7O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0552" + - name: "D-erythrose 4-phosphate" + - compartment: "m" + - formula: "C4H7O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "e4p" - chebi: "CHEBI:16897" - kegg.compound: "C00279" - metanetx.chemical: "MNXM258" - sbo: "SBO:0000247" - - !!omap - - id: "s_0553" - - name: "D-fructose" - - compartment: "c" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0553" + - name: "D-fructose" + - compartment: "c" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "fru" - chebi: "CHEBI:15824" - kegg.compound: "C00095" - metanetx.chemical: "MNXM175" - sbo: "SBO:0000247" - - !!omap - - id: "s_0554" - - name: "D-fructose" - - compartment: "e" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0554" + - name: "D-fructose" + - compartment: "e" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "fru" - chebi: "CHEBI:15824" - kegg.compound: "C00095" - metanetx.chemical: "MNXM175" - sbo: "SBO:0000247" - - !!omap - - id: "s_0555" - - name: "D-fructose 1,6-bisphosphate" - - compartment: "c" - - formula: "C6H10O12P2" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_0555" + - name: "D-fructose 1,6-bisphosphate" + - compartment: "c" + - formula: "C6H10O12P2" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "fdp" - chebi: "CHEBI:16905" - kegg.compound: "C00354" - metanetx.chemical: "MNXM417" - sbo: "SBO:0000247" - - !!omap - - id: "s_0556" - - name: "D-fructose 1-phosphate" - - compartment: "c" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0556" + - name: "D-fructose 1-phosphate" + - compartment: "c" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "f1p" - chebi: "CHEBI:18105" - kegg.compound: "C01094" - metanetx.chemical: "MNXM145568" - sbo: "SBO:0000247" - - !!omap - - id: "s_0557" - - name: "D-fructose 6-phosphate" - - compartment: "c" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0557" + - name: "D-fructose 6-phosphate" + - compartment: "c" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "f6p" - chebi: "CHEBI:57579" - kegg.compound: "C00085" - metanetx.chemical: "MNXM162235" - sbo: "SBO:0000247" - - !!omap - - id: "s_0558" - - name: "D-galactose" - - compartment: "c" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0558" + - name: "D-galactose" + - compartment: "c" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "gal" - chebi: "CHEBI:12936" - kegg.compound: "C00124" - metanetx.chemical: "MNXM390" - sbo: "SBO:0000247" - - !!omap - - id: "s_0559" - - name: "D-galactose" - - compartment: "e" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0559" + - name: "D-galactose" + - compartment: "e" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "gal" - chebi: "CHEBI:12936" - kegg.compound: "C00124" - metanetx.chemical: "MNXM390" - sbo: "SBO:0000247" - - !!omap - - id: "s_0560" - - name: "D-galacturonate" - - compartment: "e" - - formula: "C6H9O7" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0560" + - name: "D-galacturonate" + - compartment: "e" + - formula: "C6H9O7" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "galur" - chebi: "CHEBI:12952" - kegg.compound: "C00333" - metanetx.chemical: "MNXM693" - sbo: "SBO:0000247" - - !!omap - - id: "s_0561" - - name: "D-glucitol" - - compartment: "c" - - formula: "C6H14O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0561" + - name: "D-glucitol" + - compartment: "c" + - formula: "C6H14O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "sbt__D" - chebi: "CHEBI:17924" - kegg.compound: "C00794" - metanetx.chemical: "MNXM469" - sbo: "SBO:0000247" - - !!omap - - id: "s_0562" - - name: "D-glucitol" - - compartment: "e" - - formula: "C6H14O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0562" + - name: "D-glucitol" + - compartment: "e" + - formula: "C6H14O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "sbt__D" - chebi: "CHEBI:17924" - kegg.compound: "C00794" - metanetx.chemical: "MNXM469" - sbo: "SBO:0000247" - - !!omap - 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- formula: "C5H10O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0580" + - name: "D-xylulose" + - compartment: "c" + - formula: "C5H10O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "xylu__D" - chebi: "CHEBI:17140" - kegg.compound: "C00310" - metanetx.chemical: "MNXM597" - sbo: "SBO:0000247" - - !!omap - - id: "s_0581" - - name: "D-xylulose 5-phosphate" - - compartment: "c" - - formula: "C5H9O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0581" + - name: "D-xylulose 5-phosphate" + - compartment: "c" + - formula: "C5H9O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "xu5p__D" - chebi: "CHEBI:57737" - kegg.compound: "C00231" - metanetx.chemical: "MNXM186" - sbo: "SBO:0000247" - - !!omap - - id: "s_0582" - - name: "dADP" - - compartment: "c" - - formula: "C10H12N5O9P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0582" + - name: "dADP" + - compartment: "c" + - formula: "C10H12N5O9P2" + - charge: -3 + - annotation: !!omap - 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- annotation: !!omap + - !!omap + - id: "s_0609" + - name: "Delta(6)-trans,Delta(8)-cis-leukotriene B4" + - compartment: "n" + - formula: "C20H31O4" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:53027" - metanetx.chemical: "MNXM507621" - sbo: "SBO:0000247" - - !!omap - - id: "s_0610" - - name: "deoxycytidine" - - compartment: "c" - - formula: "C9H13N3O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0610" + - name: "deoxycytidine" + - compartment: "c" + - formula: "C9H13N3O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dcyt" - chebi: "CHEBI:15698" - kegg.compound: "C00881" - metanetx.chemical: "MNXM704" - sbo: "SBO:0000247" - - !!omap - - id: "s_0611" - - name: "deoxycytidine" - - compartment: "e" - - formula: "C9H13N3O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0611" + - name: "deoxycytidine" + - compartment: "e" + - formula: "C9H13N3O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dcyt" - chebi: "CHEBI:15698" - kegg.compound: "C00881" - 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compartment: "m" + - formula: "HO7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "ppi" - chebi: "CHEBI:33019" - kegg.compound: "C00013" - metanetx.chemical: "MNXM11" - sbo: "SBO:0000247" - - !!omap - - id: "s_0637" - - name: "diphosphate" - - compartment: "n" - - formula: "HO7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0637" + - name: "diphosphate" + - compartment: "n" + - formula: "HO7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "ppi" - chebi: "CHEBI:33019" - kegg.compound: "C00013" - metanetx.chemical: "MNXM11" - sbo: "SBO:0000247" - - !!omap - - id: "s_0638" - - name: "diphosphate" - - compartment: "p" - - formula: "HO7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0638" + - name: "diphosphate" + - compartment: "p" + - formula: "HO7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "ppi" - chebi: "CHEBI:33019" - kegg.compound: "C00013" - metanetx.chemical: "MNXM11" - sbo: "SBO:0000247" - - !!omap - - id: "s_0639" - 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- charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0669" + - name: "ergosterol" + - compartment: "lp" + - formula: "C28H44O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ergst" - chebi: "CHEBI:16933" - kegg.compound: "C01694" - metanetx.chemical: "MNXM922" - sbo: "SBO:0000247" - - !!omap - - id: "s_0670" - - name: "ergosterol 3-beta-D-glucoside" - - compartment: "c" - - formula: "C34H54O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0670" + - name: "ergosterol 3-beta-D-glucoside" + - compartment: "c" + - formula: "C34H54O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ergst3glc" - chebi: "CHEBI:52973" - metanetx.chemical: "MNXM52465" - sbo: "SBO:0000247" - - !!omap - - id: "s_0672" - - name: "ergosterol ester backbone" - - compartment: "c" - - formula: "C28H42" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0672" + - name: "ergosterol ester backbone" + - compartment: "c" + - formula: "C28H42" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:52320" - metanetx.chemical: "MNXM5739" - sbo: "SBO:0000649" - - !!omap - - id: "s_0677" - - name: "erythro-4-hydroxy-L-glutamic acid" - - compartment: "c" - - formula: "C5H8NO5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0677" + - name: "erythro-4-hydroxy-L-glutamic acid" + - compartment: "c" + - formula: "C5H8NO5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "e4hglu" - chebi: "CHEBI:21285" - kegg.compound: "C05947" - metanetx.chemical: "MNXM923" - sbo: "SBO:0000247" - - !!omap - - id: "s_0678" - - name: "erythro-4-hydroxy-L-glutamic acid" - - compartment: "m" - - formula: "C5H8NO5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0678" + - name: "erythro-4-hydroxy-L-glutamic acid" + - compartment: "m" + - formula: "C5H8NO5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "e4hglu" - chebi: "CHEBI:21285" - kegg.compound: "C05947" - metanetx.chemical: "MNXM923" - sbo: "SBO:0000247" - - !!omap - - id: "s_0679" - - name: "erythro-4-hydroxy-L-glutamic acid" - - compartment: "p" - - formula: "C5H8NO5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0679" + - name: "erythro-4-hydroxy-L-glutamic acid" + - compartment: "p" + - formula: "C5H8NO5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "e4hglu" - chebi: "CHEBI:21285" - kegg.compound: "C05947" - metanetx.chemical: "MNXM923" - sbo: "SBO:0000247" - - !!omap - - id: "s_0680" - - name: "ethanol" - - compartment: "c" - - formula: "C2H6O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0680" + - name: "ethanol" + - compartment: "c" + - formula: "C2H6O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "etoh" - chebi: "CHEBI:16236" - kegg.compound: "C00469" - metanetx.chemical: "MNXM303" - sbo: "SBO:0000247" - - !!omap - - id: "s_0681" - - name: "ethanol" - - compartment: "e" - - formula: "C2H6O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0681" + - name: "ethanol" + - compartment: "e" + - formula: "C2H6O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "etoh" - chebi: "CHEBI:16236" - kegg.compound: "C00469" - metanetx.chemical: "MNXM303" - sbo: "SBO:0000247" - - !!omap - - id: "s_0682" - - name: "ethanol" - - compartment: "m" - - formula: "C2H6O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0682" + - name: "ethanol" + - compartment: "m" + - formula: "C2H6O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "etoh" - chebi: "CHEBI:16236" - kegg.compound: "C00469" - metanetx.chemical: "MNXM303" - sbo: "SBO:0000247" - - !!omap - - id: "s_0683" - - name: "ethanolamine" - - compartment: "c" - - formula: "C2H8NO" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0683" + - name: "ethanolamine" + - compartment: "c" + - formula: "C2H8NO" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "etha" - chebi: "CHEBI:57603" - kegg.compound: "C00189" - metanetx.chemical: "MNXM218" - sbo: "SBO:0000247" - - !!omap - - id: "s_0684" - - name: "ethanolamine" - - compartment: "e" - - formula: "C2H8NO" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0684" + - name: "ethanolamine" + - compartment: "e" + - formula: "C2H8NO" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "etha" - chebi: "CHEBI:57603" - kegg.compound: "C00189" - metanetx.chemical: "MNXM218" - sbo: "SBO:0000247" - - !!omap - - id: "s_0685" - - name: "ethyl acetate" - - compartment: "c" - - formula: "C4H8O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0685" + - name: "ethyl acetate" + - compartment: "c" + - formula: "C4H8O2" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:27750" - kegg.compound: "C00849" - metanetx.chemical: "MNXM8595" - sbo: "SBO:0000247" - - !!omap - - id: "s_0686" - - name: "ethyl acetate" - - compartment: "e" - - formula: "C4H8O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0686" + - name: "ethyl acetate" + - compartment: "e" + - formula: "C4H8O2" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:27750" - kegg.compound: "C00849" - metanetx.chemical: "MNXM8595" - sbo: "SBO:0000247" - - !!omap - - id: "s_0687" - - name: "FAD" - - compartment: "c" - - formula: "C27H30N9O15P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0687" + - name: "FAD" + - compartment: "c" + - formula: "C27H30N9O15P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "fad" - chebi: "CHEBI:57692" - kegg.compound: "C00016" - metanetx.chemical: "MNXM33" - sbo: "SBO:0000247" - - !!omap - - id: "s_0688" - - name: "FAD" - - compartment: "m" - - formula: "C27H30N9O15P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0688" + - name: "FAD" + - compartment: "m" + - formula: "C27H30N9O15P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "fad" - chebi: "CHEBI:57692" - kegg.compound: "C00016" - metanetx.chemical: "MNXM33" - sbo: "SBO:0000247" - - !!omap - - id: "s_0689" - - name: "FADH2" - - compartment: "c" - - formula: "C27H33N9O15P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0689" + - name: "FADH2" + - compartment: "c" + - formula: "C27H33N9O15P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "fadh2" - chebi: "CHEBI:58307" - kegg.compound: "C01352" - metanetx.chemical: "MNXM38" - sbo: "SBO:0000247" - - !!omap - - id: "s_0690" - - name: "FADH2" - - compartment: "m" - - formula: "C27H33N9O15P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0690" + - name: "FADH2" + - compartment: "m" + - formula: "C27H33N9O15P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "fadh2" - chebi: "CHEBI:58307" - kegg.compound: "C01352" - metanetx.chemical: "MNXM38" - sbo: "SBO:0000247" - - !!omap - - id: "s_0692" - - name: "farnesyl diphosphate" - - compartment: "lp" - - formula: "C15H25O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0692" + - name: "farnesyl diphosphate" + - compartment: "lp" + - formula: "C15H25O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "frdp" - chebi: "CHEBI:175763" - kegg.compound: "C00448" - metanetx.chemical: "MNXM34" - sbo: "SBO:0000247" - 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annotation: !!omap - bigg.metabolite: "fecost" - chebi: "CHEBI:17038" - kegg.compound: "C04525" - metanetx.chemical: "MNXM1741" - sbo: "SBO:0000247" - - !!omap - - id: "s_0702" - - name: "fecosterol" - - compartment: "e" - - formula: "C28H46O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0702" + - name: "fecosterol" + - compartment: "e" + - formula: "C28H46O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "fecost" - chebi: "CHEBI:17038" - kegg.compound: "C04525" - metanetx.chemical: "MNXM1741" - sbo: "SBO:0000247" - - !!omap - - id: "s_0703" - - name: "fecosterol" - - compartment: "lp" - - formula: "C28H46O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0703" + - name: "fecosterol" + - compartment: "lp" + - formula: "C28H46O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "fecost" - chebi: "CHEBI:17038" - kegg.compound: "C04525" - metanetx.chemical: "MNXM1741" - sbo: "SBO:0000247" - - !!omap - - id: "s_0709" - - name: "ferricytochrome c" - - compartment: "m" - - formula: "C42H44FeN8O8S2R4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0709" + - name: "ferricytochrome c" + - compartment: "m" + - formula: "C42H44FeN8O8S2R4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ficytc" - chebi: "CHEBI:15991" - kegg.compound: "C00125" - metanetx.chemical: "MNXM5749" - sbo: "SBO:0000247" - - !!omap - - id: "s_0710" - - name: "ferrocytochrome c" - - compartment: "m" - - formula: "C42H45FeN8O8S2R4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0710" + - name: "ferrocytochrome c" + - compartment: "m" + - formula: "C42H45FeN8O8S2R4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "focytc" - chebi: "CHEBI:16928" - kegg.compound: "C00126" - metanetx.chemical: "MNXM746" - sbo: "SBO:0000247" - - !!omap - - id: "s_0712" - - name: "ferroheme b" - - compartment: "m" - - formula: "C34H30FeN4O4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0712" + - name: "ferroheme b" + - compartment: "m" + - formula: "C34H30FeN4O4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pheme" - chebi: "CHEBI:60344" - kegg.compound: "C00032" - metanetx.chemical: "MNXM249" - sbo: "SBO:0000247" - - !!omap - - id: "s_0713" - - name: "fMet-tRNA(fMet)" - - compartment: "m" - - formula: "C6H10NO2SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0713" + - name: "fMet-tRNA(fMet)" + - compartment: "m" + - formula: "C6H10NO2SR" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "fmettrna" - chebi: "CHEBI:17119" - kegg.compound: "C03294" - metanetx.chemical: "MNXM95381" - sbo: "SBO:0000247" - - !!omap - - id: "s_0714" - - name: "FMN" - - compartment: "c" - - formula: "C17H18N4O9P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0714" + - name: "FMN" + - compartment: "c" + - formula: "C17H18N4O9P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "fmn" - chebi: "CHEBI:58210" - kegg.compound: "C00061" - metanetx.chemical: "MNXM119" - sbo: "SBO:0000247" - - !!omap - - id: "s_0715" - - name: "FMN" - - compartment: "e" - - formula: "C17H18N4O9P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0715" + - name: "FMN" + - compartment: "e" + - formula: "C17H18N4O9P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "fmn" - chebi: "CHEBI:58210" - kegg.compound: "C00061" - metanetx.chemical: "MNXM119" - sbo: "SBO:0000247" - - !!omap - - id: "s_0716" - - name: "FMN" - - compartment: "m" - - formula: "C17H18N4O9P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0716" + - name: "FMN" + - compartment: "m" + - formula: "C17H18N4O9P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "fmn" - chebi: "CHEBI:58210" - kegg.compound: "C00061" - metanetx.chemical: "MNXM119" - sbo: "SBO:0000247" - - !!omap - - id: "s_0717" - - name: "FMNH2" - - compartment: "c" - - formula: "C17H21N4O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0717" + - name: "FMNH2" + - compartment: "c" + - formula: "C17H21N4O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "fmnh2" - chebi: "CHEBI:57618" - kegg.compound: "C01847" - metanetx.chemical: "MNXM208" - sbo: "SBO:0000247" - - !!omap - - id: "s_0719" - - name: "folate" - - compartment: "c" - - formula: "C19H17N7O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0719" + - name: "folate" + - compartment: "c" + - formula: "C19H17N7O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "fol" - chebi: "CHEBI:62501" - kegg.compound: "C00504" - metanetx.chemical: "MNXM617" - sbo: "SBO:0000247" - - !!omap - - id: "s_0720" - - name: "folate" - - compartment: "e" - - formula: "C19H17N7O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0720" + - name: "folate" + - compartment: "e" + - formula: "C19H17N7O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "fol" - chebi: "CHEBI:62501" - kegg.compound: "C00504" - metanetx.chemical: "MNXM617" - sbo: "SBO:0000247" - - !!omap - - id: "s_0721" - - name: "formaldehyde" - - compartment: "c" - - formula: "CH2O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0721" + - name: "formaldehyde" + - compartment: "c" + - formula: "CH2O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "fald" - chebi: "CHEBI:16842" - kegg.compound: "C00067" - metanetx.chemical: "MNXM56" - sbo: "SBO:0000247" - - !!omap - - id: "s_0722" - - name: "formate" - - compartment: "c" - - formula: "CHO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0722" + - name: "formate" + - compartment: "c" + - formula: "CHO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "for" - chebi: "CHEBI:15740" - kegg.compound: "C00058" - metanetx.chemical: "MNXM39" - sbo: "SBO:0000247" - - !!omap - - id: "s_0723" - - name: "formate" - - compartment: "e" - - formula: "CHO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0723" + - name: "formate" + - compartment: "e" + - formula: "CHO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "for" - chebi: "CHEBI:15740" - kegg.compound: "C00058" - metanetx.chemical: "MNXM39" - sbo: "SBO:0000247" - 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annotation: !!omap - bigg.metabolite: "fum" - chebi: "CHEBI:29806" - kegg.compound: "C00122" - metanetx.chemical: "MNXM93" - sbo: "SBO:0000247" - - !!omap - - id: "s_0727" - - name: "fumarate" - - compartment: "m" - - formula: "C4H2O4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0727" + - name: "fumarate" + - compartment: "m" + - formula: "C4H2O4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "fum" - chebi: "CHEBI:29806" - kegg.compound: "C00122" - metanetx.chemical: "MNXM93" - sbo: "SBO:0000247" - - !!omap - - id: "s_0734" - - name: "gamma-aminobutyrate" - - compartment: "c" - - formula: "C4H9NO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0734" + - name: "gamma-aminobutyrate" + - compartment: "c" + - formula: "C4H9NO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "4abut" - chebi: "CHEBI:16865" - kegg.compound: "C00334" - metanetx.chemical: "MNXM192" - sbo: "SBO:0000247" - - !!omap - - id: "s_0736" - - name: "gamma-aminobutyrate" - - compartment: "e" - - formula: "C4H9NO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0736" + - name: "gamma-aminobutyrate" + - compartment: "e" + - formula: "C4H9NO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "4abut" - chebi: "CHEBI:16865" - kegg.compound: "C00334" - metanetx.chemical: "MNXM192" - sbo: "SBO:0000247" - - !!omap - - id: "s_0738" - - name: "gamma-aminobutyrate" - - compartment: "m" - - formula: "C4H9NO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0738" + - name: "gamma-aminobutyrate" + - compartment: "m" + - formula: "C4H9NO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "4abut" - chebi: "CHEBI:16865" - kegg.compound: "C00334" - metanetx.chemical: "MNXM192" - sbo: "SBO:0000247" - - !!omap - - id: "s_0739" - - name: "GDP" - - compartment: "c" - - formula: "C10H12N5O11P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0739" + - name: "GDP" + - compartment: "c" + - formula: "C10H12N5O11P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "gdp" - chebi: "CHEBI:58189" - kegg.compound: "C00035" - metanetx.chemical: "MNXM30" - sbo: "SBO:0000247" - - !!omap - - id: "s_0740" - - name: "GDP" - - compartment: "g" - - formula: "C10H12N5O11P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0740" + - name: "GDP" + - compartment: "g" + - formula: "C10H12N5O11P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "gdp" - chebi: "CHEBI:58189" - kegg.compound: "C00035" - metanetx.chemical: "MNXM30" - sbo: "SBO:0000247" - - !!omap - - id: "s_0741" - - name: "GDP" - - compartment: "m" - - formula: "C10H12N5O11P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0741" + - name: "GDP" + - compartment: "m" + - formula: "C10H12N5O11P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "gdp" - chebi: "CHEBI:58189" - kegg.compound: "C00035" - metanetx.chemical: "MNXM30" - sbo: "SBO:0000247" - - !!omap - - id: "s_0742" - - name: "GDP" - - compartment: "n" - - formula: "C10H12N5O11P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0742" + - name: "GDP" + - compartment: "n" + - formula: "C10H12N5O11P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "gdp" - chebi: "CHEBI:58189" - kegg.compound: "C00035" - metanetx.chemical: "MNXM30" - sbo: "SBO:0000247" - - !!omap - - id: "s_0743" - - name: "GDP-alpha-D-mannose" - - compartment: "c" - - formula: "C16H23N5O16P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0743" + - name: "GDP-alpha-D-mannose" + - compartment: "c" + - formula: "C16H23N5O16P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "gdpmann" - chebi: "CHEBI:57527" - kegg.compound: "C00096" - metanetx.chemical: "MNXM82" - sbo: "SBO:0000247" - - !!omap - - id: "s_0744" - - name: "GDP-alpha-D-mannose" - - compartment: "g" - - formula: "C16H23N5O16P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0744" + - name: "GDP-alpha-D-mannose" + - compartment: "g" + - formula: "C16H23N5O16P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "gdpmann" - chebi: "CHEBI:57527" - kegg.compound: "C00096" - metanetx.chemical: "MNXM82" - sbo: "SBO:0000247" - - !!omap - - id: "s_0745" - - name: "geranyl diphosphate" - - compartment: "c" - - formula: "C10H17O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0745" + - name: "geranyl diphosphate" + - compartment: "c" + - formula: "C10H17O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "grdp" - chebi: "CHEBI:58057" - kegg.compound: "C00341" - metanetx.chemical: "MNXM100" - sbo: "SBO:0000247" - - !!omap - - id: "s_0746" - - name: "geranylgeranyl diphosphate" - - compartment: "lp" - - formula: "C20H33O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0746" + - name: "geranylgeranyl diphosphate" + - compartment: "lp" + - formula: "C20H33O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "ggdp" - chebi: "CHEBI:58756" - kegg.compound: "C00353" - metanetx.chemical: "MNXM139" - sbo: "SBO:0000247" - - !!omap - - id: "s_0747" - - name: "Gln-tRNA(Gln)" - - compartment: "c" - - formula: "C5H10N2O2R" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0747" + - name: "Gln-tRNA(Gln)" + - compartment: "c" + - formula: "C5H10N2O2R" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "glntrna" - chebi: "CHEBI:29166" - kegg.compound: "C02282" - metanetx.chemical: "MNXM89810" - sbo: "SBO:0000247" - - !!omap - - id: "s_0748" - - name: "Glu-tRNA(Glu)" - - compartment: "c" - - formula: "C5H8NO3R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0748" + - name: "Glu-tRNA(Glu)" + - compartment: "c" + - formula: "C5H8NO3R" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "glutrna" - chebi: "CHEBI:29157" - kegg.compound: "C02987" - metanetx.chemical: "MNXM89752" - sbo: "SBO:0000247" - - !!omap - - id: "s_0749" - - name: "Glu-tRNA(Glu)" - - compartment: "m" - - formula: "C5H8NO3R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0749" + - name: "Glu-tRNA(Glu)" + - compartment: "m" + - formula: "C5H8NO3R" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "glutrna" - chebi: "CHEBI:29157" - kegg.compound: "C02987" - metanetx.chemical: "MNXM89752" - sbo: "SBO:0000247" - - !!omap - - id: "s_0750" - - name: "glutathione" - - compartment: "c" - - formula: "C10H16N3O6S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0750" + - name: "glutathione" + - compartment: "c" + - formula: "C10H16N3O6S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "gthrd" - chebi: "CHEBI:57925" - kegg.compound: "C00051" - metanetx.chemical: "MNXM57" - sbo: "SBO:0000247" - - !!omap - - id: "s_0751" - - name: "glutathione" - - compartment: "e" - - formula: "C10H16N3O6S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0751" + - name: "glutathione" + - compartment: "e" + - formula: "C10H16N3O6S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "gthrd" - chebi: "CHEBI:57925" - kegg.compound: "C00051" - metanetx.chemical: "MNXM57" - sbo: "SBO:0000247" - - !!omap - - id: "s_0752" - - name: "glutathione" - - compartment: "m" - - formula: "C10H16N3O6S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0752" + - name: "glutathione" + - compartment: "m" + - formula: "C10H16N3O6S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "gthrd" - chebi: "CHEBI:57925" - kegg.compound: "C00051" - metanetx.chemical: "MNXM57" - sbo: "SBO:0000247" - - !!omap - - id: "s_0753" - - name: "glutathione" - - compartment: "v" - - formula: "C10H16N3O6S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0753" + - name: "glutathione" + - compartment: "v" + - formula: "C10H16N3O6S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "gthrd" - chebi: "CHEBI:57925" - kegg.compound: "C00051" - metanetx.chemical: "MNXM57" - sbo: "SBO:0000247" - - !!omap - - id: "s_0754" - - name: "glutathione disulfide" - - compartment: "c" - - formula: "C20H30N6O12S2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0754" + - name: "glutathione disulfide" + - compartment: "c" + - formula: "C20H30N6O12S2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "gthox" - chebi: "CHEBI:58297" - kegg.compound: "C00127" - metanetx.chemical: "MNXM151" - sbo: "SBO:0000247" - - !!omap - - id: "s_0755" - - name: "glutathione disulfide" - - compartment: "e" - - formula: "C20H30N6O12S2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0755" + - name: "glutathione disulfide" + - compartment: "e" + - formula: "C20H30N6O12S2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "gthox" - chebi: "CHEBI:58297" - kegg.compound: "C00127" - metanetx.chemical: "MNXM151" - sbo: "SBO:0000247" - - !!omap - - id: "s_0756" - - name: "glutathione disulfide" - - compartment: "m" - - formula: "C20H30N6O12S2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0756" + - name: "glutathione disulfide" + - compartment: "m" + - formula: "C20H30N6O12S2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "gthox" - chebi: "CHEBI:58297" - kegg.compound: "C00127" - metanetx.chemical: "MNXM151" - sbo: "SBO:0000247" - - !!omap - - id: "s_0757" - - name: "Gly-tRNA(Gly)" - - compartment: "c" - - formula: "C2H5NOR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0757" + - name: "Gly-tRNA(Gly)" + - compartment: "c" + - formula: "C2H5NOR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "glytrna" - chebi: "CHEBI:29156" - kegg.compound: "C02412" - metanetx.chemical: "MNXM89763" - sbo: "SBO:0000247" - - !!omap - - id: "s_0764" - - name: "glyceraldehyde 3-phosphate" - - compartment: "c" - - formula: "C3H5O6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0764" + - name: "glyceraldehyde 3-phosphate" + - compartment: "c" + - formula: "C3H5O6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "g3p" - chebi: "CHEBI:58027" - kegg.compound: "C00661" - metanetx.chemical: "MNXM74" - sbo: "SBO:0000247" - - !!omap - - id: "s_0765" - - name: "glycerol" - - compartment: "c" - - formula: "C3H8O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0765" + - name: "glycerol" + - compartment: "c" + - formula: "C3H8O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "glyc" - chebi: "CHEBI:17754" - kegg.compound: "C00116" - metanetx.chemical: "MNXM89612" - sbo: "SBO:0000247" - - !!omap - - id: "s_0766" - - name: "glycerol" - - compartment: "e" - - formula: "C3H8O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0766" + - name: "glycerol" + - compartment: "e" + - formula: "C3H8O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "glyc" - chebi: "CHEBI:17754" - kegg.compound: "C00116" - metanetx.chemical: "MNXM89612" - sbo: "SBO:0000247" - - !!omap - - id: "s_0767" - - name: "glycerol 3-phosphate" - - compartment: "c" - - formula: "C3H7O6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0767" + - name: "glycerol 3-phosphate" + - compartment: "c" + - formula: "C3H7O6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "glyc3p" - chebi: "CHEBI:57597" - kegg.compound: "C00093" - metanetx.chemical: "MNXM66" - sbo: "SBO:0000247" - - !!omap - - id: "s_0769" - - name: "glycerol 3-phosphate" - - compartment: "lp" - - formula: "C3H7O6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0769" + - name: "glycerol 3-phosphate" + - compartment: "lp" + - formula: "C3H7O6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "glyc3p" - chebi: "CHEBI:57597" - kegg.compound: "C00093" - metanetx.chemical: "MNXM66" - sbo: "SBO:0000247" - - !!omap - - id: "s_0770" - - name: "glycerol 3-phosphate" - - compartment: "m" - - formula: "C3H7O6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_0770" + - name: "glycerol 3-phosphate" + - compartment: "m" + - formula: "C3H7O6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "glyc3p" - chebi: "CHEBI:57597" - kegg.compound: "C00093" - metanetx.chemical: "MNXM66" - sbo: "SBO:0000247" - - !!omap - - id: "s_0771" - - name: "glycerone" - - compartment: "c" - - formula: "C3H6O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0771" + - name: "glycerone" + - compartment: "c" + - formula: "C3H6O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dha" - chebi: "CHEBI:16016" - kegg.compound: "C00184" - metanetx.chemical: "MNXM460" - sbo: "SBO:0000247" - - !!omap - - id: "s_0773" - - name: "glycogen" - - compartment: "c" - - formula: "C6H10O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0773" + - name: "glycogen" + - compartment: "c" + - formula: "C6H10O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "glycogen" - chebi: "CHEBI:28087" - kegg.compound: "C00182" - metanetx.chemical: "MNXM55375" - sbo: "SBO:0000247" - - !!omap - - id: "s_0774" - - name: "glycogen" - - compartment: "v" - - formula: "C6H10O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0774" + - name: "glycogen" + - compartment: "v" + - formula: "C6H10O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "glycogen" - chebi: "CHEBI:28087" - kegg.compound: "C00182" - metanetx.chemical: "MNXM55375" - sbo: "SBO:0000247" - - !!omap - - id: "s_0775" - - name: "glycolaldehyde" - - compartment: "c" - - formula: "C2H4O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0775" + - name: "glycolaldehyde" + - compartment: "c" + - formula: "C2H4O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "gcald" - chebi: "CHEBI:17071" - kegg.compound: "C00266" - metanetx.chemical: "MNXM349" - sbo: "SBO:0000247" - - !!omap - - id: "s_0776" - - name: "glycolaldehyde" - - compartment: "e" - - formula: "C2H4O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0776" + - name: "glycolaldehyde" + - compartment: "e" + - formula: "C2H4O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "gcald" - chebi: "CHEBI:17071" - kegg.compound: "C00266" - metanetx.chemical: "MNXM349" - sbo: "SBO:0000247" - - !!omap - - id: "s_0777" - - name: "glycolaldehyde" - - compartment: "m" - - formula: "C2H4O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0777" + - name: "glycolaldehyde" + - compartment: "m" + - formula: "C2H4O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "gcald" - chebi: "CHEBI:17071" - kegg.compound: "C00266" - metanetx.chemical: "MNXM349" - sbo: "SBO:0000247" - - !!omap - - id: "s_0779" - - name: "glyoxylate" - - compartment: "c" - - formula: "C2HO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0779" + - name: "glyoxylate" + - compartment: "c" + - formula: "C2HO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "glx" - chebi: "CHEBI:36655" - kegg.compound: "C00048" - metanetx.chemical: "MNXM69" - sbo: "SBO:0000247" - - !!omap - - id: "s_0780" - - name: "glyoxylate" - - compartment: "e" - - formula: "C2HO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0780" + - name: "glyoxylate" + - compartment: "e" + - formula: "C2HO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "glx" - chebi: "CHEBI:36655" - kegg.compound: "C00048" - metanetx.chemical: "MNXM69" - sbo: "SBO:0000247" - - !!omap - - id: "s_0781" - - name: "glyoxylate" - 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- annotation: !!omap + - !!omap + - id: "s_0839" + - name: "hydrogen peroxide" + - compartment: "n" + - formula: "H2O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "h2o2" - chebi: "CHEBI:16240" - kegg.compound: "C00027" - metanetx.chemical: "MNXM22" - sbo: "SBO:0000247" - - !!omap - - id: "s_0840" - - name: "hydrogen peroxide" - - compartment: "p" - - formula: "H2O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0840" + - name: "hydrogen peroxide" + - compartment: "p" + - formula: "H2O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "h2o2" - chebi: "CHEBI:16240" - kegg.compound: "C00027" - metanetx.chemical: "MNXM22" - sbo: "SBO:0000247" - - !!omap - - id: "s_0841" - - name: "hydrogen sulfide" - - compartment: "c" - - formula: "HS" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_0841" + - name: "hydrogen sulfide" + - compartment: "c" + - formula: "HS" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "h2s" - chebi: "CHEBI:29919" - kegg.compound: "C00283" - 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id: "s_0845" + - name: "icosaprenyl diphosphate" + - compartment: "lp" + - formula: "C100H161O7P2" + - charge: -3 + - annotation: !!omap - chebi: "CHEBI:53033" - metanetx.chemical: "MNXM57076" - sbo: "SBO:0000247" - - !!omap - - id: "s_0846" - - name: "IDP" - - compartment: "c" - - formula: "C10H11N4O11P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_0846" + - name: "IDP" + - compartment: "c" + - formula: "C10H11N4O11P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "idp" - chebi: "CHEBI:58280" - kegg.compound: "C00104" - metanetx.chemical: "MNXM495" - sbo: "SBO:0000247" - - !!omap - - id: "s_0847" - - name: "Ile-tRNA(Ile)" - - compartment: "c" - - formula: "C6H13NOR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_0847" + - name: "Ile-tRNA(Ile)" + - compartment: "c" + - formula: "C6H13NOR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "iletrna" - chebi: "CHEBI:29160" - kegg.compound: "C03127" - metanetx.chemical: "MNXM89832" - sbo: "SBO:0000247" - 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formula: "C10H9NO" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "id3acald" - chebi: "CHEBI:18086" - kegg.compound: "C00637" - metanetx.chemical: "MNXM518" - sbo: "SBO:0000247" - - !!omap - - id: "s_0851" - - name: "indol-3-ylacetaldehyde" - - compartment: "e" - - formula: "C10H9NO" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0851" + - name: "indol-3-ylacetaldehyde" + - compartment: "e" + - formula: "C10H9NO" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "id3acald" - chebi: "CHEBI:18086" - kegg.compound: "C00637" - metanetx.chemical: "MNXM518" - sbo: "SBO:0000247" - - !!omap - - id: "s_0852" - - name: "indol-3-ylacetaldehyde" - - compartment: "m" - - formula: "C10H9NO" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0852" + - name: "indol-3-ylacetaldehyde" + - compartment: "m" + - formula: "C10H9NO" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "id3acald" - chebi: "CHEBI:18086" - kegg.compound: "C00637" - metanetx.chemical: "MNXM518" - 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name: "indole-3-pyruvate" + - compartment: "c" + - formula: "C11H8NO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "indpyr" - chebi: "CHEBI:17640" - kegg.compound: "C00331" - metanetx.chemical: "MNXM315" - sbo: "SBO:0000247" - - !!omap - - id: "s_0856" - - name: "inosine" - - compartment: "c" - - formula: "C10H12N4O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0856" + - name: "inosine" + - compartment: "c" + - formula: "C10H12N4O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ins" - chebi: "CHEBI:17596" - kegg.compound: "C00294" - metanetx.chemical: "MNXM334" - sbo: "SBO:0000247" - - !!omap - - id: "s_0857" - - name: "inosine" - - compartment: "e" - - formula: "C10H12N4O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_0857" + - name: "inosine" + - compartment: "e" + - formula: "C10H12N4O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ins" - chebi: "CHEBI:17596" - kegg.compound: "C00294" - metanetx.chemical: "MNXM334" - sbo: "SBO:0000247" - 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- annotation: !!omap + - !!omap + - id: "s_1145" + - name: "mannosylinositol phosphorylceramide D (C26)" + - compartment: "m" + - formula: "C56H110NO19P" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:62683" - metanetx.chemical: "MNXM61054" - sbo: "SBO:0000247" - - !!omap - - id: "s_1148" - - name: "Met-tRNA(Met)" - - compartment: "c" - - formula: "C5H11NOSR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1148" + - name: "Met-tRNA(Met)" + - compartment: "c" + - formula: "C5H11NOSR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "mettrna" - chebi: "CHEBI:16635" - kegg.compound: "C02430" - metanetx.chemical: "MNXM90636" - sbo: "SBO:0000247" - - !!omap - - id: "s_1149" - - name: "Met-tRNA(Met)" - - compartment: "m" - - formula: "C5H11NOSR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1149" + - name: "Met-tRNA(Met)" + - compartment: "m" + - formula: "C5H11NOSR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "mettrna" - chebi: "CHEBI:16635" - 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!!omap + - id: "s_1153" + - name: "myo-inositol" + - compartment: "c" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "inost" - chebi: "CHEBI:17268" - kegg.compound: "C00137" - metanetx.chemical: "MNXM127" - sbo: "SBO:0000247" - - !!omap - - id: "s_1154" - - name: "myo-inositol" - - compartment: "e" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1154" + - name: "myo-inositol" + - compartment: "e" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "inost" - chebi: "CHEBI:17268" - kegg.compound: "C00137" - metanetx.chemical: "MNXM127" - sbo: "SBO:0000247" - - !!omap - - id: "s_1156" - - name: "myo-inositol 1,3,4,5,6-pentakisphosphate" - - compartment: "c" - - formula: "C6H7O21P5" - - charge: -10 - - annotation: !!omap + - !!omap + - id: "s_1156" + - name: "myo-inositol 1,3,4,5,6-pentakisphosphate" + - compartment: "c" + - formula: "C6H7O21P5" + - charge: -10 + - annotation: !!omap - bigg.metabolite: "inospp1" - 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- !!omap - - id: "s_1159" - - name: "myo-inositol hexakisphosphate" - - compartment: "n" - - formula: "C6H6O24P6" - - charge: -12 - - annotation: !!omap + - !!omap + - id: "s_1159" + - name: "myo-inositol hexakisphosphate" + - compartment: "n" + - formula: "C6H6O24P6" + - charge: -12 + - annotation: !!omap - bigg.metabolite: "minohp" - chebi: "CHEBI:58130" - kegg.compound: "C01204" - metanetx.chemical: "MNXM491" - sbo: "SBO:0000247" - - !!omap - - id: "s_1161" - - name: "myristate" - - compartment: "c" - - formula: "C14H27O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1161" + - name: "myristate" + - compartment: "c" + - formula: "C14H27O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ttdca" - chebi: "CHEBI:30807" - kegg.compound: "C06424" - metanetx.chemical: "MNXM314" - sbo: "SBO:0000247" - - !!omap - - id: "s_1163" - - name: "myristate" - - compartment: "e" - - formula: "C14H27O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1163" + - name: "myristate" + - compartment: "e" + - formula: "C14H27O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ttdca" - chebi: "CHEBI:30807" - kegg.compound: "C06424" - metanetx.chemical: "MNXM314" - sbo: "SBO:0000247" - - !!omap - - id: "s_1166" - - name: "myristate" - - compartment: "p" - - formula: "C14H27O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1166" + - name: "myristate" + - compartment: "p" + - formula: "C14H27O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ttdca" - chebi: "CHEBI:30807" - kegg.compound: "C06424" - metanetx.chemical: "MNXM314" - sbo: "SBO:0000247" - - !!omap - - id: "s_1176" - - name: "myristoyl-CoA" - - compartment: "c" - - formula: "C35H58N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1176" + - name: "myristoyl-CoA" + - compartment: "c" + - formula: "C35H58N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "tdcoa" - chebi: "CHEBI:57385" - kegg.compound: "C02593" - metanetx.chemical: "MNXM224" - sbo: "SBO:0000247" - - !!omap - - id: "s_1179" - - name: "myristoyl-CoA" - - compartment: "p" - - formula: "C35H58N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1179" + - name: "myristoyl-CoA" + - compartment: "p" + - formula: "C35H58N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "tdcoa" - chebi: "CHEBI:57385" - kegg.compound: "C02593" - metanetx.chemical: "MNXM224" - sbo: "SBO:0000247" - - !!omap - - id: "s_1180" - - name: "N(1)-acetylspermidine" - - compartment: "c" - - formula: "C9H23N3O" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_1180" + - name: "N(1)-acetylspermidine" + - compartment: "c" + - formula: "C9H23N3O" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "N1aspmd" - chebi: "CHEBI:58324" - kegg.compound: "C00612" - metanetx.chemical: "MNXM501" - sbo: "SBO:0000247" - - !!omap - - id: "s_1181" - - name: "N(1)-acetylspermine" - - compartment: "c" - - formula: "C12H31N4O" - - charge: 3 - - annotation: !!omap + - !!omap + - id: "s_1181" + - name: "N(1)-acetylspermine" + - compartment: "c" + - formula: "C12H31N4O" + - charge: 3 + - annotation: !!omap - bigg.metabolite: "N1sprm" - chebi: "CHEBI:58101" - kegg.compound: "C02567" - metanetx.chemical: "MNXM600" - sbo: "SBO:0000247" - - !!omap - - id: "s_1182" - - name: "N(2)-acetyl-L-ornithine" - - compartment: "m" - - formula: "C7H14N2O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1182" + - name: "N(2)-acetyl-L-ornithine" + - compartment: "m" + - formula: "C7H14N2O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "acorn" - chebi: "CHEBI:16543" - kegg.compound: "C00437" - metanetx.chemical: "MNXM817" - sbo: "SBO:0000247" - - !!omap - - id: "s_1183" - - name: "N(pros)-methyl-L-histidine" - - compartment: "c" - - formula: "C7H11N3O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1183" + - name: "N(pros)-methyl-L-histidine" + - compartment: "c" + - formula: "C7H11N3O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "NPmehis" - chebi: "CHEBI:27596" - kegg.compound: "C01152" - metanetx.chemical: "MNXM722872" - sbo: "SBO:0000247" - - !!omap - - id: "s_1184" - - name: "N,N'-diacetylchitobiosyldiphosphodolichol" - - compartment: "c" - - formula: "C36H62N2O17P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1184" + - name: "N,N'-diacetylchitobiosyldiphosphodolichol" + - compartment: "c" + - formula: "C36H62N2O17P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "chito2pdol" - chebi: "CHEBI:12427" - kegg.compound: "C04537" - metanetx.chemical: "MNXM63078" - sbo: "SBO:0000247" - - !!omap - - id: "s_1185" - - name: "N,N'-diformyldityrosine" - - compartment: "c" - - formula: "C20H22N2O8" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1185" + - name: "N,N'-diformyldityrosine" + - compartment: "c" + - formula: "C20H22N2O8" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:50611" - metanetx.chemical: "MNXM147516" - sbo: "SBO:0000247" - - !!omap - - id: "s_1186" - - name: "N,N'-diformyldityrosine" - - compartment: "e" - - formula: "C20H22N2O8" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1186" + - name: "N,N'-diformyldityrosine" + - compartment: "e" + - formula: "C20H22N2O8" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:50611" - metanetx.chemical: "MNXM147516" - sbo: "SBO:0000247" - - !!omap - - id: "s_1187" - - name: "N-(5-phospho-beta-D-ribosyl)anthranilate" - - compartment: "c" - - formula: "C12H13NO9P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1187" + - name: "N-(5-phospho-beta-D-ribosyl)anthranilate" + - compartment: "c" + - formula: "C12H13NO9P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "pran" - chebi: "CHEBI:18277" - kegg.compound: "C04302" - metanetx.chemical: "MNXM1489" - sbo: "SBO:0000247" - - !!omap - - id: "s_1188" - - name: "N-[(R)-4-phosphonopantothenoyl]-L-cysteine" - - compartment: "c" - - formula: "C12H20N2O9PS" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1188" + - name: "N-[(R)-4-phosphonopantothenoyl]-L-cysteine" + - compartment: "c" + - formula: "C12H20N2O9PS" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "4ppcys" - chebi: "CHEBI:59458" - kegg.compound: "C04352" - metanetx.chemical: "MNXM483" - sbo: "SBO:0000247" - - !!omap - - id: "s_1189" - - name: "N-acetyl-alpha-D-glucosamine 1-phosphate" - - compartment: "c" - - formula: "C8H14NO9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1189" + - name: "N-acetyl-alpha-D-glucosamine 1-phosphate" + - compartment: "c" + - formula: "C8H14NO9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "acgal1p" - chebi: "CHEBI:16446" - kegg.compound: "C04501" - metanetx.chemical: "MNXM340" - sbo: "SBO:0000247" - - !!omap - - id: "s_1190" - - name: "N-acetyl-D-glucosamine 6-phosphate" - - compartment: "c" - - formula: "C8H14NO9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1190" + - name: "N-acetyl-D-glucosamine 6-phosphate" + - compartment: "c" + - formula: "C8H14NO9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "acgam6p" - chebi: "CHEBI:57513" - kegg.compound: "C00357" - metanetx.chemical: "MNXM63556" - sbo: "SBO:0000247" - - !!omap - - id: "s_1191" - - name: "N-acetyl-L-gamma-glutamyl phosphate" - - compartment: "m" - - formula: "C7H9NO8P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1191" + - name: "N-acetyl-L-gamma-glutamyl phosphate" + - compartment: "m" + - formula: "C7H9NO8P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "acg5p" - chebi: "CHEBI:57936" - kegg.compound: "C04133" - metanetx.chemical: "MNXM1384" - sbo: "SBO:0000247" - - !!omap - - id: "s_1192" - - name: "N-acetyl-L-glutamate" - - compartment: "m" - - formula: "C7H9NO5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1192" + - name: "N-acetyl-L-glutamate" + - compartment: "m" + - formula: "C7H9NO5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "acglu" - chebi: "CHEBI:44337" - kegg.compound: "C00624" - metanetx.chemical: "MNXM730" - sbo: "SBO:0000247" - - !!omap - - id: "s_1193" - - name: "N-acetylputrescine" - - compartment: "c" - - formula: "C6H15N2O" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1193" + - name: "N-acetylputrescine" + - compartment: "c" + - formula: "C6H15N2O" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "aprut" - chebi: "CHEBI:58263" - kegg.compound: "C02714" - metanetx.chemical: "MNXM1153" - sbo: "SBO:0000247" - - !!omap - - id: "s_1194" - - name: "N-carbamoyl-L-aspartate" - - compartment: "c" - - formula: "C5H6N2O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1194" + - name: "N-carbamoyl-L-aspartate" + - compartment: "c" + - formula: "C5H6N2O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "cbasp" - chebi: "CHEBI:32814" - kegg.compound: "C00438" - metanetx.chemical: "MNXM465" - sbo: "SBO:0000247" - - !!omap - - id: "s_1195" - - name: "N-formyl-L-kynurenine" - - compartment: "c" - - formula: "C11H12N2O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1195" + - name: "N-formyl-L-kynurenine" + - compartment: "c" + - formula: "C11H12N2O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "Lfmkynr" - chebi: "CHEBI:30249" - kegg.compound: "C02700" - metanetx.chemical: "MNXM1288" - sbo: "SBO:0000247" - - !!omap - - id: "s_1196" - - name: "N-formyl-L-tyrosine" - - compartment: "c" - - formula: "C10H10NO4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1196" + - name: "N-formyl-L-tyrosine" + - compartment: "c" + - formula: "C10H10NO4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "Nfortyr" - chebi: "CHEBI:50603" - metanetx.chemical: "MNXM63755" - sbo: "SBO:0000247" - - !!omap - - id: "s_1198" - - name: "NAD" - - compartment: "c" - - formula: "C21H26N7O14P2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1198" + - name: "NAD" + - compartment: "c" + - formula: "C21H26N7O14P2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nad" - chebi: "CHEBI:57540" - kegg.compound: "C00003" - metanetx.chemical: "MNXM8" - sbo: "SBO:0000247" - - !!omap - - id: "s_1199" - - name: "NAD" - - compartment: "er" - - formula: "C21H26N7O14P2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1199" + - name: "NAD" + - compartment: "er" + - formula: "C21H26N7O14P2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nad" - chebi: "CHEBI:57540" - kegg.compound: "C00003" - metanetx.chemical: "MNXM8" - sbo: "SBO:0000247" - - !!omap - - id: "s_1200" - - name: "NAD" - - compartment: "m" - - formula: "C21H26N7O14P2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1200" + - name: "NAD" + - compartment: "m" + - formula: "C21H26N7O14P2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nad" - chebi: "CHEBI:57540" - kegg.compound: "C00003" - metanetx.chemical: "MNXM8" - sbo: "SBO:0000247" - - !!omap - - id: "s_1201" - - name: "NAD" - - compartment: "n" - - formula: "C21H26N7O14P2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1201" + - name: "NAD" + - compartment: "n" + - formula: "C21H26N7O14P2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nad" - chebi: "CHEBI:57540" - kegg.compound: "C00003" - metanetx.chemical: "MNXM8" - sbo: "SBO:0000247" - - !!omap - - id: "s_1202" - - name: "NAD" - - compartment: "p" - - formula: "C21H26N7O14P2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1202" + - name: "NAD" + - compartment: "p" + - formula: "C21H26N7O14P2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nad" - chebi: "CHEBI:57540" - kegg.compound: "C00003" - metanetx.chemical: "MNXM8" - sbo: "SBO:0000247" - - !!omap - - id: "s_1203" - - name: "NADH" - - compartment: "c" - - formula: "C21H27N7O14P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1203" + - name: "NADH" + - compartment: "c" + - formula: "C21H27N7O14P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "nadh" - chebi: "CHEBI:57945" - kegg.compound: "C00004" - metanetx.chemical: "MNXM10" - sbo: "SBO:0000247" - - !!omap - - id: "s_1204" - - name: "NADH" - - compartment: "er" - - formula: "C21H27N7O14P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1204" + - name: "NADH" + - compartment: "er" + - formula: "C21H27N7O14P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "nadh" - chebi: "CHEBI:57945" - kegg.compound: "C00004" - metanetx.chemical: "MNXM10" - sbo: "SBO:0000247" - - !!omap - - id: "s_1205" - - name: "NADH" - - compartment: "m" - - formula: "C21H27N7O14P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1205" + - name: "NADH" + - compartment: "m" + - formula: "C21H27N7O14P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "nadh" - chebi: "CHEBI:57945" - kegg.compound: "C00004" - metanetx.chemical: "MNXM10" - sbo: "SBO:0000247" - - !!omap - - id: "s_1206" - - name: "NADH" - - compartment: "p" - - formula: "C21H27N7O14P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1206" + - name: "NADH" + - compartment: "p" + - formula: "C21H27N7O14P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "nadh" - chebi: "CHEBI:57945" - kegg.compound: "C00004" - metanetx.chemical: "MNXM10" - sbo: "SBO:0000247" - - !!omap - - id: "s_1207" - - name: "NADP(+)" - - compartment: "c" - - formula: "C21H25N7O17P3" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1207" + - name: "NADP(+)" + - compartment: "c" + - formula: "C21H25N7O17P3" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "nadp" - chebi: "CHEBI:58349" - kegg.compound: "C00006" - metanetx.chemical: "MNXM5" - sbo: "SBO:0000247" - - !!omap - - id: "s_1208" - - name: "NADP(+)" - - compartment: "er" - - formula: "C21H25N7O17P3" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1208" + - name: "NADP(+)" + - compartment: "er" + - formula: "C21H25N7O17P3" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "nadp" - chebi: "CHEBI:58349" - kegg.compound: "C00006" - metanetx.chemical: "MNXM5" - sbo: "SBO:0000247" - - !!omap - - id: "s_1210" - - name: "NADP(+)" - - compartment: "m" - - formula: "C21H25N7O17P3" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1210" + - name: "NADP(+)" + - compartment: "m" + - formula: "C21H25N7O17P3" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "nadp" - chebi: "CHEBI:58349" - kegg.compound: "C00006" - metanetx.chemical: "MNXM5" - sbo: "SBO:0000247" - - !!omap - - id: "s_1211" - - name: "NADP(+)" - - compartment: "p" - - formula: "C21H25N7O17P3" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1211" + - name: "NADP(+)" + - compartment: "p" + - formula: "C21H25N7O17P3" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "nadp" - chebi: "CHEBI:58349" - kegg.compound: "C00006" - metanetx.chemical: "MNXM5" - sbo: "SBO:0000247" - - !!omap - - id: "s_1212" - - name: "NADPH" - - compartment: "c" - - formula: "C21H26N7O17P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1212" + - name: "NADPH" + - compartment: "c" + - formula: "C21H26N7O17P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "nadph" - chebi: "CHEBI:57783" - kegg.compound: "C00005" - metanetx.chemical: "MNXM6" - sbo: "SBO:0000247" - - !!omap - - id: "s_1213" - - name: "NADPH" - - compartment: "er" - - formula: "C21H26N7O17P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1213" + - name: "NADPH" + - compartment: "er" + - formula: "C21H26N7O17P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "nadph" - chebi: "CHEBI:57783" - kegg.compound: "C00005" - metanetx.chemical: "MNXM6" - sbo: "SBO:0000247" - - !!omap - - id: "s_1214" - - name: "NADPH" - - compartment: "m" - - formula: "C21H26N7O17P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1214" + - name: "NADPH" + - compartment: "m" + - formula: "C21H26N7O17P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "nadph" - chebi: "CHEBI:57783" - kegg.compound: "C00005" - metanetx.chemical: "MNXM6" - sbo: "SBO:0000247" - - !!omap - - id: "s_1215" - - name: "NADPH" - - compartment: "p" - - formula: "C21H26N7O17P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1215" + - name: "NADPH" + - compartment: "p" + - formula: "C21H26N7O17P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "nadph" - chebi: "CHEBI:57783" - kegg.compound: "C00005" - metanetx.chemical: "MNXM6" - sbo: "SBO:0000247" - - !!omap - - id: "s_1216" - - name: "nicotinamide" - - compartment: "c" - - formula: "C6H6N2O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1216" + - name: "nicotinamide" + - compartment: "c" + - formula: "C6H6N2O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ncam" - chebi: "CHEBI:17154" - kegg.compound: "C00153" - metanetx.chemical: "MNXM216" - sbo: "SBO:0000247" - - !!omap - - id: "s_1217" - - name: "nicotinamide" - - compartment: "n" - - formula: "C6H6N2O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1217" + - name: "nicotinamide" + - compartment: "n" + - formula: "C6H6N2O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ncam" - chebi: "CHEBI:17154" - kegg.compound: "C00153" - metanetx.chemical: "MNXM216" - sbo: "SBO:0000247" - - !!omap - - id: "s_1218" - - name: "nicotinamide riboside" - - compartment: "c" - - formula: "C11H15N2O5" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1218" + - name: "nicotinamide riboside" + - compartment: "c" + - formula: "C11H15N2O5" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "rnam" - chebi: "CHEBI:15927" - kegg.compound: "C03150" - metanetx.chemical: "MNXM1115" - sbo: "SBO:0000247" - - !!omap - - id: "s_1219" - - name: "nicotinate" - - compartment: "c" - - formula: "C6H4NO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1219" + - name: "nicotinate" + - compartment: "c" + - formula: "C6H4NO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nac" - chebi: "CHEBI:32544" - kegg.compound: "C00253" - metanetx.chemical: "MNXM274" - sbo: "SBO:0000247" - - !!omap - - id: "s_1220" - - name: "nicotinate" - - compartment: "e" - - formula: "C6H4NO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1220" + - name: "nicotinate" + - compartment: "e" + - formula: "C6H4NO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nac" - chebi: "CHEBI:32544" - kegg.compound: "C00253" - metanetx.chemical: "MNXM274" - sbo: "SBO:0000247" - - !!omap - - id: "s_1221" - - name: "nicotinate" - - compartment: "m" - - formula: "C6H4NO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1221" + - name: "nicotinate" + - compartment: "m" + - formula: "C6H4NO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nac" - chebi: "CHEBI:32544" - kegg.compound: "C00253" - metanetx.chemical: "MNXM274" - sbo: "SBO:0000247" - - !!omap - - id: "s_1222" - - name: "nicotinic acid D-ribonucleotide" - - compartment: "c" - - formula: "C11H12NO9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1222" + - name: "nicotinic acid D-ribonucleotide" + - compartment: "c" + - formula: "C11H12NO9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "nicrnt" - chebi: "CHEBI:57502" - kegg.compound: "C01185" - metanetx.chemical: "MNXM194" - sbo: "SBO:0000247" - - !!omap - - id: "s_1223" - - name: "nicotinic acid D-ribonucleotide" - - compartment: "m" - - formula: "C11H12NO9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1223" + - name: "nicotinic acid D-ribonucleotide" + - compartment: "m" + - formula: "C11H12NO9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "nicrnt" - chebi: "CHEBI:57502" - kegg.compound: "C01185" - metanetx.chemical: "MNXM194" - sbo: "SBO:0000247" - - !!omap - - id: "s_1224" - - name: "NMN" - - compartment: "c" - - formula: "C11H14N2O8P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1224" + - name: "NMN" + - compartment: "c" + - formula: "C11H14N2O8P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nmn" - chebi: "CHEBI:14649" - kegg.compound: "C00455" - metanetx.chemical: "MNXM355" - sbo: "SBO:0000247" - - !!omap - - id: "s_1225" - - name: "NMN" - - compartment: "e" - - formula: "C11H14N2O8P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1225" + - name: "NMN" + - compartment: "e" + - formula: "C11H14N2O8P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nmn" - chebi: "CHEBI:14649" - kegg.compound: "C00455" - metanetx.chemical: "MNXM355" - sbo: "SBO:0000247" - - !!omap - - id: "s_1227" - - name: "NMN" - - compartment: "n" - - formula: "C11H14N2O8P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1227" + - name: "NMN" + - compartment: "n" + - formula: "C11H14N2O8P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nmn" - chebi: "CHEBI:14649" - kegg.compound: "C00455" - metanetx.chemical: "MNXM355" - sbo: "SBO:0000247" - - !!omap - - id: "s_1228" - - name: "NMN" - - compartment: "p" - - formula: "C11H14N2O8P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1228" + - name: "NMN" + - compartment: "p" + - formula: "C11H14N2O8P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nmn" - chebi: "CHEBI:14649" - kegg.compound: "C00455" - metanetx.chemical: "MNXM355" - sbo: "SBO:0000247" - - !!omap - - id: "s_1229" - - name: "nonadecaprenyl diphosphate" - - compartment: "lp" - - formula: "C95H153O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1229" + - name: "nonadecaprenyl diphosphate" + - compartment: "lp" + - formula: "C95H153O7P2" + - charge: -3 + - annotation: !!omap - chebi: "CHEBI:53034" - metanetx.chemical: "MNXM64863" - sbo: "SBO:0000247" - - !!omap - - id: "s_1230" - - name: "nonaprenyl 4-hydroxybenzoate" - - compartment: "c" - - formula: "C52H77O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1230" + - name: "nonaprenyl 4-hydroxybenzoate" + - compartment: "c" + - formula: "C52H77O3" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:18162" - kegg.compound: "C03885" - metanetx.chemical: "MNXM2847" - sbo: "SBO:0000247" - - !!omap - - id: "s_1231" - - name: "nonaprenyl diphosphate" - - compartment: "c" - - formula: "C45H73O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1231" + - name: "nonaprenyl diphosphate" + - compartment: "c" + - formula: "C45H73O7P2" + - charge: -3 + - annotation: !!omap - chebi: "CHEBI:53044" - kegg.compound: "C04145" - metanetx.chemical: "MNXM968" - sbo: "SBO:0000247" - - !!omap - - id: "s_1232" - - name: "nonaprenyl diphosphate" - - compartment: "lp" - - formula: "C45H73O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1232" + - name: "nonaprenyl diphosphate" + - compartment: "lp" + - formula: "C45H73O7P2" + - charge: -3 + - annotation: !!omap - chebi: "CHEBI:53044" - kegg.compound: "C04145" - metanetx.chemical: "MNXM968" - sbo: "SBO:0000247" - - !!omap - - id: "s_1233" - - name: "O-acetyl-L-homoserine" - - compartment: "c" - - formula: "C6H11NO4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1233" + - name: "O-acetyl-L-homoserine" + - compartment: "c" + - formula: "C6H11NO4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "achms" - chebi: "CHEBI:16288" - kegg.compound: "C01077" - metanetx.chemical: "MNXM699" - sbo: "SBO:0000247" - - !!omap - - id: "s_1234" - - name: "O-acetyl-L-serine" - - compartment: "c" - - formula: "C5H9NO4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1234" + - name: "O-acetyl-L-serine" + - compartment: "c" + - formula: "C5H9NO4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "acser" - chebi: "CHEBI:17981" - kegg.compound: "C00979" - metanetx.chemical: "MNXM418" - sbo: "SBO:0000247" - - !!omap - - id: "s_1235" - - name: "O-acetylcarnitine" - - compartment: "c" - - formula: "C9H17NO4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1235" + - name: "O-acetylcarnitine" + - compartment: "c" + - formula: "C9H17NO4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "acrn" - chebi: "CHEBI:57589" - kegg.compound: "C02571" - metanetx.chemical: "MNXM1028" - sbo: "SBO:0000247" - - !!omap - - id: "s_1236" - - name: "O-acetylcarnitine" - - compartment: "m" - - formula: "C9H17NO4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1236" + - name: "O-acetylcarnitine" + - compartment: "m" + - formula: "C9H17NO4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "acrn" - chebi: "CHEBI:57589" - kegg.compound: "C02571" - metanetx.chemical: "MNXM1028" - sbo: "SBO:0000247" - - !!omap - - id: "s_1237" - - name: "O-acetylcarnitine" - - compartment: "p" - - formula: "C9H17NO4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1237" + - name: "O-acetylcarnitine" + - compartment: "p" + - formula: "C9H17NO4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "acrn" - chebi: "CHEBI:57589" - kegg.compound: "C02571" - metanetx.chemical: "MNXM1028" - sbo: "SBO:0000247" - - !!omap - - id: "s_1238" - - name: "O-phospho-L-homoserine" - - compartment: "c" - - formula: "C4H8NO6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1238" + - name: "O-phospho-L-homoserine" + - compartment: "c" + - formula: "C4H8NO6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "phom" - chebi: "CHEBI:57590" - kegg.compound: "C01102" - metanetx.chemical: "MNXM1334" - sbo: "SBO:0000247" - - !!omap - - id: "s_1239" - - name: "O-phosphoethanolamine" - - compartment: "c" - - formula: "C2H7NO4P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1239" + - name: "O-phosphoethanolamine" + - compartment: "c" + - formula: "C2H7NO4P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ethamp" - chebi: "CHEBI:58190" - kegg.compound: "C00346" - metanetx.chemical: "MNXM187" - sbo: "SBO:0000247" - - !!omap - - id: "s_1240" - - name: "O-phosphoethanolamine" - - compartment: "er" - - formula: "C2H7NO4P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1240" + - name: "O-phosphoethanolamine" + - compartment: "er" + - formula: "C2H7NO4P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ethamp" - chebi: "CHEBI:58190" - kegg.compound: "C00346" - metanetx.chemical: "MNXM187" - sbo: "SBO:0000247" - - !!omap - - id: "s_1241" - - name: "O-succinyl-L-homoserine" - - compartment: "c" - - formula: "C8H12NO6" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1241" + - name: "O-succinyl-L-homoserine" + - compartment: "c" + - formula: "C8H12NO6" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "suchms" - chebi: "CHEBI:57661" - kegg.compound: "C01118" - metanetx.chemical: "MNXM820" - sbo: "SBO:0000247" - - !!omap - - id: "s_1246" - - name: "octadecaprenyl diphosphate" - - compartment: "lp" - - formula: "C90H145O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1246" + - name: "octadecaprenyl diphosphate" + - compartment: "lp" + - formula: "C90H145O7P2" + - charge: -3 + - annotation: !!omap - chebi: "CHEBI:53035" - metanetx.chemical: "MNXM65303" - sbo: "SBO:0000247" - - !!omap - - id: "s_1248" - - name: "octanoate" - - compartment: "c" - - formula: "C8H15O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1248" + - name: "octanoate" + - compartment: "c" + - formula: "C8H15O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "octa" - chebi: "CHEBI:25646" - kegg.compound: "C06423" - metanetx.chemical: "MNXM750" - sbo: "SBO:0000247" - - !!omap - - id: "s_1250" - - name: "octanoate" - - compartment: "e" - - formula: "C8H15O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1250" + - name: "octanoate" + - compartment: "e" + - formula: "C8H15O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "octa" - chebi: "CHEBI:25646" - kegg.compound: "C06423" - metanetx.chemical: "MNXM750" - sbo: "SBO:0000247" - - !!omap - - id: "s_1253" - - name: "octanoate" - - compartment: "p" - - formula: "C8H15O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1253" + - name: "octanoate" + - compartment: "p" + - formula: "C8H15O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "octa" - chebi: "CHEBI:25646" - kegg.compound: "C06423" - metanetx.chemical: "MNXM750" - sbo: "SBO:0000247" - - !!omap - - id: "s_1254" - - name: "octanoyl-ACP" - - compartment: "m" - - formula: "C8H15OSR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1254" + - name: "octanoyl-ACP" + - compartment: "m" + - formula: "C8H15OSR" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:7725" - kegg.compound: "C05752" - metanetx.chemical: "MNXM979" - sbo: "SBO:0000247" - - !!omap - - id: "s_1258" - - name: "octanoyl-CoA" - - compartment: "p" - - formula: "C29H46N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1258" + - name: "octanoyl-CoA" + - compartment: "p" + - formula: "C29H46N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "occoa" - chebi: "CHEBI:15533" - kegg.compound: "C01944" - metanetx.chemical: "MNXM342" - sbo: "SBO:0000247" - - !!omap - - id: "s_1259" - - name: "octaprenyl diphosphate" - - compartment: "lp" - - formula: "C40H65O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1259" + - name: "octaprenyl diphosphate" + - compartment: "lp" + - formula: "C40H65O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "octdp" - chebi: "CHEBI:53045" - kegg.compound: "C04146" - metanetx.chemical: "MNXM811" - sbo: "SBO:0000247" - - !!omap - - id: "s_1260" - - name: "oleate" - - compartment: "c" - - formula: "C18H33O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1260" + - name: "oleate" + - compartment: "c" + - formula: "C18H33O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ocdcea" - chebi: "CHEBI:30823" - kegg.compound: "C00712" - metanetx.chemical: "MNXM306" - sbo: "SBO:0000247" - - !!omap - - id: "s_1262" - - name: "oleoyl-CoA" - - compartment: "c" - - formula: "C39H64N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1262" + - name: "oleoyl-CoA" + - compartment: "c" + - formula: "C39H64N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ocdce9coa" - chebi: "CHEBI:57387" - kegg.compound: "C00510" - metanetx.chemical: "MNXM686" - sbo: "SBO:0000247" - - !!omap - - id: "s_1265" - - name: "oleoyl-CoA" - - compartment: "p" - - formula: "C39H64N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1265" + - name: "oleoyl-CoA" + - compartment: "p" + - formula: "C39H64N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ocdce9coa" - chebi: "CHEBI:57387" - kegg.compound: "C00510" - metanetx.chemical: "MNXM686" - sbo: "SBO:0000247" - - !!omap - - id: "s_1266" - - name: "ornithine" - - compartment: "c" - - formula: "C5H13N2O2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1266" + - name: "ornithine" + - compartment: "c" + - formula: "C5H13N2O2" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "orn" - chebi: "CHEBI:46912" - kegg.compound: "C01602" - metanetx.chemical: "MNXM89689" - sbo: "SBO:0000247" - - !!omap - - id: "s_1267" - - name: "ornithine" - - compartment: "e" - - formula: "C5H13N2O2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1267" + - name: "ornithine" + - compartment: "e" + - formula: "C5H13N2O2" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "orn" - chebi: "CHEBI:46912" - kegg.compound: "C01602" - metanetx.chemical: "MNXM89689" - sbo: "SBO:0000247" - - !!omap - - id: "s_1268" - - name: "ornithine" - - compartment: "m" - - formula: "C5H13N2O2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1268" + - name: "ornithine" + - compartment: "m" + - formula: "C5H13N2O2" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "orn" - chebi: "CHEBI:46912" - kegg.compound: "C01602" - metanetx.chemical: "MNXM89689" - sbo: "SBO:0000247" - - !!omap - - id: "s_1269" - - name: "orotate" - - compartment: "c" - - formula: "C5H3N2O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1269" + - name: "orotate" + - compartment: "c" + - formula: "C5H3N2O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "orot" - chebi: "CHEBI:30839" - kegg.compound: "C00295" - metanetx.chemical: "MNXM235" - sbo: "SBO:0000247" - - !!omap - - id: "s_1270" - - name: "orotidine 5'-(dihydrogen phosphate)" - - compartment: "c" - - formula: "C10H10N2O11P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1270" + - name: "orotidine 5'-(dihydrogen phosphate)" + - compartment: "c" + - formula: "C10H10N2O11P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "orot5p" - chebi: "CHEBI:57538" - kegg.compound: "C01103" - metanetx.chemical: "MNXM519" - sbo: "SBO:0000247" - - !!omap - - id: "s_1271" - - name: "oxaloacetate" - - compartment: "c" - - formula: "C4H2O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1271" + - name: "oxaloacetate" + - compartment: "c" + - formula: "C4H2O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "oaa" - chebi: "CHEBI:16452" - kegg.compound: "C00036" - metanetx.chemical: "MNXM46" - sbo: "SBO:0000247" - - !!omap - - id: "s_1272" - - name: "oxaloacetate" - - compartment: "e" - - formula: "C4H2O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1272" + - name: "oxaloacetate" + - compartment: "e" + - formula: "C4H2O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "oaa" - chebi: "CHEBI:16452" - kegg.compound: "C00036" - metanetx.chemical: "MNXM46" - sbo: "SBO:0000247" - - !!omap - - id: "s_1273" - - name: "oxaloacetate" - - compartment: "m" - - formula: "C4H2O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1273" + - name: "oxaloacetate" + - compartment: "m" + - formula: "C4H2O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "oaa" - chebi: "CHEBI:16452" - kegg.compound: "C00036" - metanetx.chemical: "MNXM46" - sbo: "SBO:0000247" - - !!omap - - id: "s_1274" - - name: "oxaloacetate" - - compartment: "p" - - formula: "C4H2O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1274" + - name: "oxaloacetate" + - compartment: "p" + - formula: "C4H2O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "oaa" - chebi: "CHEBI:16452" - kegg.compound: "C00036" - metanetx.chemical: "MNXM46" - sbo: "SBO:0000247" - - !!omap - - id: "s_1275" - - name: "oxygen" - - compartment: "c" - - formula: "O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1275" + - name: "oxygen" + - compartment: "c" + - formula: "O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "o2" - chebi: "CHEBI:15379" - kegg.compound: "C00007" - metanetx.chemical: "MNXM4" - sbo: "SBO:0000247" - - !!omap - - id: "s_1276" - - name: "oxygen" - - compartment: "er" - - formula: "O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1276" + - name: "oxygen" + - compartment: "er" + - formula: "O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "o2" - chebi: "CHEBI:15379" - kegg.compound: "C00007" - metanetx.chemical: "MNXM4" - sbo: "SBO:0000247" - - !!omap - - id: "s_1277" - - name: "oxygen" - - compartment: "e" - - formula: "O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1277" + - name: "oxygen" + - compartment: "e" + - formula: "O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "o2" - chebi: "CHEBI:15379" - kegg.compound: "C00007" - metanetx.chemical: "MNXM4" - sbo: "SBO:0000247" - - !!omap - - id: "s_1278" - - name: "oxygen" - - compartment: "m" - - formula: "O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1278" + - name: "oxygen" + - compartment: "m" + - formula: "O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "o2" - chebi: "CHEBI:15379" - kegg.compound: "C00007" - metanetx.chemical: "MNXM4" - sbo: "SBO:0000247" - - !!omap - - id: "s_1279" - - name: "oxygen" - - compartment: "p" - - formula: "O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1279" + - name: "oxygen" + - compartment: "p" + - formula: "O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "o2" - chebi: "CHEBI:15379" - kegg.compound: "C00007" - metanetx.chemical: "MNXM4" - sbo: "SBO:0000247" - - !!omap - - id: "s_1282" - - name: "P(1),P(4)-bis(5'-adenosyl) tetraphosphate" - - compartment: "c" - - formula: "C20H24N10O19P4" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1282" + - name: "P(1),P(4)-bis(5'-adenosyl) tetraphosphate" + - compartment: "c" + - formula: "C20H24N10O19P4" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ap4a" - chebi: "CHEBI:58141" - kegg.compound: "C01260" - metanetx.chemical: "MNXM1089" - sbo: "SBO:0000247" - - !!omap - - id: "s_1283" - - name: "P(1),P(4)-bis(5'-guanosyl) tetraphosphate" - - compartment: "c" - - formula: "C20H24N10O21P4" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1283" + - name: "P(1),P(4)-bis(5'-guanosyl) tetraphosphate" + - compartment: "c" + - formula: "C20H24N10O21P4" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "gp4g" - chebi: "CHEBI:57553" - kegg.compound: "C01261" - metanetx.chemical: "MNXM1582" - sbo: "SBO:0000247" - - !!omap - - id: "s_1284" - - name: "P1-(5'-adenosyl),P4-(5'-guanosyl) tetraphosphate" - - compartment: "c" - - formula: "C20H24N10O20P4" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1284" + - name: "P1-(5'-adenosyl),P4-(5'-guanosyl) tetraphosphate" + - compartment: "c" + - formula: "C20H24N10O20P4" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ap4g" - chebi: "CHEBI:52968" - metanetx.chemical: "MNXM66180" - sbo: "SBO:0000247" - - !!omap - - id: "s_1286" - - name: "palmitate" - - compartment: "c" - - formula: "C16H31O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1286" + - name: "palmitate" + - compartment: "c" + - formula: "C16H31O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hdca" - chebi: "CHEBI:7896" - kegg.compound: "C00249" - metanetx.chemical: "MNXM108" - sbo: "SBO:0000247" - - !!omap - - id: "s_1288" - - name: "palmitate" - - compartment: "e" - - formula: "C16H31O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1288" + - name: "palmitate" + - compartment: "e" + - formula: "C16H31O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hdca" - chebi: "CHEBI:7896" - kegg.compound: "C00249" - metanetx.chemical: "MNXM108" - sbo: "SBO:0000247" - - !!omap - - id: "s_1291" - - name: "palmitate" - - compartment: "p" - - formula: "C16H31O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1291" + - name: "palmitate" + - compartment: "p" + - formula: "C16H31O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hdca" - chebi: "CHEBI:7896" - kegg.compound: "C00249" - metanetx.chemical: "MNXM108" - sbo: "SBO:0000247" - - !!omap - - id: "s_1293" - - name: "palmitoleate" - - compartment: "c" - - formula: "C16H29O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1293" + - name: "palmitoleate" + - compartment: "c" + - formula: "C16H29O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hdcea" - chebi: "CHEBI:32372" - kegg.compound: "C08362" - metanetx.chemical: "MNXM162245" - sbo: "SBO:0000247" - - !!omap - - id: "s_1295" - - name: "palmitoleate" - - compartment: "e" - - formula: "C16H29O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1295" + - name: "palmitoleate" + - compartment: "e" + - formula: "C16H29O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hdcea" - chebi: "CHEBI:32372" - kegg.compound: "C08362" - metanetx.chemical: "MNXM162245" - sbo: "SBO:0000247" - - !!omap - - id: "s_1298" - - name: "palmitoleate" - - compartment: "p" - - formula: "C16H29O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1298" + - name: "palmitoleate" + - compartment: "p" + - formula: "C16H29O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hdcea" - chebi: "CHEBI:32372" - kegg.compound: "C08362" - metanetx.chemical: "MNXM162245" - sbo: "SBO:0000247" - - !!omap - - id: "s_1302" - - name: "palmitoyl-CoA" - - compartment: "c" - - formula: "C37H62N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1302" + - name: "palmitoyl-CoA" + - compartment: "c" + - formula: "C37H62N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "pmtcoa" - chebi: "CHEBI:57379" - kegg.compound: "C00154" - metanetx.chemical: "MNXM88" - sbo: "SBO:0000247" - - !!omap - - id: "s_1303" - - name: "palmitoyl-CoA" - - compartment: "er" - - formula: "C37H62N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1303" + - name: "palmitoyl-CoA" + - compartment: "er" + - formula: "C37H62N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "pmtcoa" - chebi: "CHEBI:57379" - kegg.compound: "C00154" - metanetx.chemical: "MNXM88" - sbo: "SBO:0000247" - - !!omap - - id: "s_1305" - - name: "palmitoyl-CoA" - - compartment: "p" - - formula: "C37H62N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1305" + - name: "palmitoyl-CoA" + - compartment: "p" + - formula: "C37H62N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "pmtcoa" - chebi: "CHEBI:57379" - kegg.compound: "C00154" - metanetx.chemical: "MNXM88" - sbo: "SBO:0000247" - - !!omap - - id: "s_1307" - - name: "pantetheine 4'-phosphate" - - compartment: "c" - - formula: "C11H21N2O7PS" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1307" + - name: "pantetheine 4'-phosphate" + - compartment: "c" + - formula: "C11H21N2O7PS" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pan4p" - chebi: "CHEBI:47942" - kegg.compound: "C01134" - metanetx.chemical: "MNXM373" - sbo: "SBO:0000247" - - !!omap - - id: "s_1308" - - name: "pantetheine 4'-phosphate" - - compartment: "m" - - formula: "C11H21N2O7PS" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1308" + - name: "pantetheine 4'-phosphate" + - compartment: "m" + - formula: "C11H21N2O7PS" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pan4p" - chebi: "CHEBI:47942" - kegg.compound: "C01134" - metanetx.chemical: "MNXM373" - sbo: "SBO:0000247" - - !!omap - - id: "s_1309" - - name: "pectin" - - compartment: "e" - - formula: "C6H7O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1309" + - name: "pectin" + - compartment: "e" + - formula: "C6H7O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pectin" - chebi: "CHEBI:17309" - kegg.compound: "C00714" - metanetx.chemical: "MNXM107600" - sbo: "SBO:0000247" - - !!omap - - id: "s_1310" - - name: "pentadecaprenyl diphosphate" - - compartment: "lp" - - formula: "C75H121O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1310" + - name: "pentadecaprenyl diphosphate" + - compartment: "lp" + - formula: "C75H121O7P2" + - charge: -3 + - annotation: !!omap - chebi: "CHEBI:53038" - metanetx.chemical: "MNXM73155" - sbo: "SBO:0000247" - - !!omap - - id: "s_1311" - - name: "pentaprenyl diphosphate" - - compartment: "c" - - formula: "C25H41O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1311" + - name: "pentaprenyl diphosphate" + - compartment: "c" + - formula: "C25H41O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "pendp" - chebi: "CHEBI:53048" - kegg.compound: "C04217" - metanetx.chemical: "MNXM2210" - sbo: "SBO:0000247" - - !!omap - - id: "s_1312" - - name: "pentaprenyl diphosphate" - - compartment: "lp" - - formula: "C25H41O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1312" + - name: "pentaprenyl diphosphate" + - compartment: "lp" + - formula: "C25H41O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "pendp" - chebi: "CHEBI:53048" - kegg.compound: "C04217" - metanetx.chemical: "MNXM2210" - sbo: "SBO:0000247" - - !!omap - - id: "s_1313" - - name: "pentaprenyl diphosphate" - - compartment: "m" - - formula: "C25H41O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1313" + - name: "pentaprenyl diphosphate" + - compartment: "m" + - formula: "C25H41O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "pendp" - chebi: "CHEBI:53048" - kegg.compound: "C04217" - metanetx.chemical: "MNXM2210" - sbo: "SBO:0000247" - - !!omap - - id: "s_1314" - - name: "Phe-tRNA(Phe)" - - compartment: "c" - - formula: "C9H11NOR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1314" + - name: "Phe-tRNA(Phe)" + - compartment: "c" + - formula: "C9H11NOR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "phetrna" - chebi: "CHEBI:29153" - kegg.compound: "C03511" - metanetx.chemical: "MNXM89802" - sbo: "SBO:0000247" - - !!omap - - id: "s_1315" - - name: "Phe-tRNA(Phe)" - - compartment: "m" - - formula: "C9H11NOR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1315" + - name: "Phe-tRNA(Phe)" + - compartment: "m" + - formula: "C9H11NOR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "phetrna" - chebi: "CHEBI:29153" - kegg.compound: "C03511" - metanetx.chemical: "MNXM89802" - sbo: "SBO:0000247" - - !!omap - - id: "s_1316" - - name: "phenethyl acetate" - - compartment: "c" - - formula: "C10H12O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1316" + - name: "phenethyl acetate" + - compartment: "c" + - formula: "C10H12O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pheac" - chebi: "CHEBI:31988" - kegg.compound: "C12303" - metanetx.chemical: "MNXM12629" - sbo: "SBO:0000247" - - !!omap - - id: "s_1317" - - name: "phenethyl acetate" - - compartment: "e" - - formula: "C10H12O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1317" + - name: "phenethyl acetate" + - compartment: "e" + - formula: "C10H12O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pheac" - chebi: "CHEBI:31988" - kegg.compound: "C12303" - metanetx.chemical: "MNXM12629" - sbo: "SBO:0000247" - - !!omap - - id: "s_1318" - - name: "phenylacetaldehyde" - - compartment: "c" - - formula: "C8H8O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1318" + - name: "phenylacetaldehyde" + - compartment: "c" + - formula: "C8H8O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pacald" - chebi: "CHEBI:16424" - kegg.compound: "C00601" - metanetx.chemical: "MNXM473" - sbo: "SBO:0000247" - - !!omap - - id: "s_1319" - - name: "phenylacetaldehyde" - - compartment: "e" - - formula: "C8H8O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1319" + - name: "phenylacetaldehyde" + - compartment: "e" + - formula: "C8H8O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pacald" - chebi: "CHEBI:16424" - kegg.compound: "C00601" - metanetx.chemical: "MNXM473" - sbo: "SBO:0000247" - - !!omap - - id: "s_1320" - - name: "phenylacetaldehyde" - - compartment: "m" - - formula: "C8H8O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1320" + - name: "phenylacetaldehyde" + - compartment: "m" + - formula: "C8H8O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pacald" - chebi: "CHEBI:16424" - kegg.compound: "C00601" - metanetx.chemical: "MNXM473" - sbo: "SBO:0000247" - - !!omap - - id: "s_1321" - - name: "phenylacetic acid" - - compartment: "c" - - formula: "C8H7O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1321" + - name: "phenylacetic acid" + - compartment: "c" + - formula: "C8H7O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "pac" - chebi: "CHEBI:18401" - kegg.compound: "C07086" - metanetx.chemical: "MNXM497" - sbo: "SBO:0000247" - - !!omap - - id: "s_1322" - - name: "phosphate" - - compartment: "c" - - formula: "HO4P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1322" + - name: "phosphate" + - compartment: "c" + - formula: "HO4P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pi" - chebi: "CHEBI:43474" - kegg.compound: "C00009" - metanetx.chemical: "MNXM9" - sbo: "SBO:0000247" - - !!omap - - id: "s_1323" - - name: "phosphate" - - compartment: "er" - - formula: "HO4P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1323" + - name: "phosphate" + - compartment: "er" + - formula: "HO4P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pi" - chebi: "CHEBI:43474" - kegg.compound: "C00009" - metanetx.chemical: "MNXM9" - sbo: "SBO:0000247" - - !!omap - - id: "s_1324" - - name: "phosphate" - - compartment: "e" - - formula: "HO4P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1324" + - name: "phosphate" + - compartment: "e" + - formula: "HO4P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pi" - chebi: "CHEBI:43474" - kegg.compound: "C00009" - metanetx.chemical: "MNXM9" - sbo: "SBO:0000247" - - !!omap - - id: "s_1325" - - name: "phosphate" - - compartment: "g" - - formula: "HO4P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1325" + - name: "phosphate" + - compartment: "g" + - formula: "HO4P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pi" - chebi: "CHEBI:43474" - kegg.compound: "C00009" - metanetx.chemical: "MNXM9" - sbo: "SBO:0000247" - - !!omap - - id: "s_1326" - - name: "phosphate" - - compartment: "m" - - formula: "HO4P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1326" + - name: "phosphate" + - compartment: "m" + - formula: "HO4P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pi" - chebi: "CHEBI:43474" - kegg.compound: "C00009" - metanetx.chemical: "MNXM9" - sbo: "SBO:0000247" - - !!omap - - id: "s_1329" - - name: "phosphate" - - compartment: "v" - - formula: "HO4P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1329" + - name: "phosphate" + - compartment: "v" + - formula: "HO4P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pi" - chebi: "CHEBI:43474" - kegg.compound: "C00009" - metanetx.chemical: "MNXM9" - sbo: "SBO:0000247" - - !!omap - - id: "s_1337" - - name: "phosphatidyl-L-serine backbone" - - compartment: "c" - - formula: "C6H10NO6P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1337" + - name: "phosphatidyl-L-serine backbone" + - compartment: "c" + - formula: "C6H10NO6P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ps_cho" - chebi: "CHEBI:18303" - kegg.compound: "C02737" - metanetx.chemical: "MNXM221" - sbo: "SBO:0000649" - - !!omap - - id: "s_1346" - - name: "phosphatidylcholine backbone" - - compartment: "c" - - formula: "C8H16NO3P" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1346" + - name: "phosphatidylcholine backbone" + - compartment: "c" + - formula: "C8H16NO3P" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "pchol_cho" - chebi: "CHEBI:49183" - kegg.compound: "C00157" - metanetx.chemical: "MNXM96952" - sbo: "SBO:0000649" - - !!omap - - id: "s_1351" - - name: "phosphatidylethanolamine backbone" - - compartment: "c" - - formula: "C5H10NO4P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1351" + - name: "phosphatidylethanolamine backbone" + - compartment: "c" + - formula: "C5H10NO4P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pe_hs" - chebi: "CHEBI:16038" - kegg.compound: "C00350" - metanetx.chemical: "MNXM115" - sbo: "SBO:0000649" - - !!omap - - id: "s_1352" - - name: "phosphatidylethanolamine backbone" - - compartment: "er" - - formula: "C5H10NO4P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1352" + - name: "phosphatidylethanolamine backbone" + - compartment: "er" + - formula: "C5H10NO4P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pe_hs" - chebi: "CHEBI:16038" - kegg.compound: "C00350" - metanetx.chemical: "MNXM115" - sbo: "SBO:0000649" - - !!omap - - id: "s_1360" - - name: "phosphoenolpyruvate" - - compartment: "c" - - formula: "C3H2O6P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1360" + - name: "phosphoenolpyruvate" + - compartment: "c" + - formula: "C3H2O6P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "pep" - chebi: "CHEBI:58702" - kegg.compound: "C00074" - metanetx.chemical: "MNXM73" - sbo: "SBO:0000247" - - !!omap - - id: "s_1361" - - name: "phosphoenolpyruvate" - - compartment: "m" - - formula: "C3H2O6P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1361" + - name: "phosphoenolpyruvate" + - compartment: "m" + - formula: "C3H2O6P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "pep" - chebi: "CHEBI:58702" - kegg.compound: "C00074" - metanetx.chemical: "MNXM73" - sbo: "SBO:0000247" - - !!omap - - id: "s_1364" - - name: "phosphoribosyl-carboxy-aminoimidazole" - - compartment: "c" - - formula: "C9H12N3O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1364" + - name: "phosphoribosyl-carboxy-aminoimidazole" + - compartment: "c" + - formula: "C9H12N3O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "5aizc" - chebi: "CHEBI:58564" - kegg.compound: "C04751" - metanetx.chemical: "MNXM507" - sbo: "SBO:0000247" - - !!omap - - id: "s_1365" - - name: "phosphoribosyl-formamido-carboxamide" - - compartment: "c" - - formula: "C10H13N4O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1365" + - name: "phosphoribosyl-formamido-carboxamide" + - compartment: "c" + - formula: "C10H13N4O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "fprica" - chebi: "CHEBI:58467" - kegg.compound: "C04734" - metanetx.chemical: "MNXM456" - sbo: "SBO:0000247" - - !!omap - - id: "s_1366" - - name: "phytosphingosine" - - compartment: "er" - - formula: "C18H40NO3" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1366" + - name: "phytosphingosine" + - compartment: "er" + - formula: "C18H40NO3" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "psphings" - chebi: "CHEBI:46961" - kegg.compound: "C12144" - metanetx.chemical: "MNXM914" - sbo: "SBO:0000247" - - !!omap - - id: "s_1367" - - name: "phytosphingosine 1-phosphate" - - compartment: "er" - - formula: "C18H39NO6P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1367" + - name: "phytosphingosine 1-phosphate" + - compartment: "er" + - formula: "C18H39NO6P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "psph1p" - chebi: "CHEBI:46970" - metanetx.chemical: "MNXM3337" - sbo: "SBO:0000247" - - !!omap - - id: "s_1368" - - name: "pimeloyl-CoA" - - compartment: "c" - - formula: "C28H41N7O19P3S" - - charge: -5 - - annotation: !!omap + - !!omap + - id: "s_1368" + - name: "pimeloyl-CoA" + - compartment: "c" + - formula: "C28H41N7O19P3S" + - charge: -5 + - annotation: !!omap - bigg.metabolite: "pmcoa" - chebi: "CHEBI:57360" - kegg.compound: "C01063" - metanetx.chemical: "MNXM951" - sbo: "SBO:0000247" - - !!omap - - id: "s_1371" - - name: "polysulphur" - - compartment: "c" - - formula: "S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1371" + - name: "polysulphur" + - compartment: "c" + - formula: "S" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:17909" - kegg.compound: "C00087" - metanetx.chemical: "MNXM77783" - sbo: "SBO:0000247" - - !!omap - - id: "s_1372" - - name: "porphobilinogen" - - compartment: "c" - - formula: "C10H13N2O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1372" + - name: "porphobilinogen" + - compartment: "c" + - formula: "C10H13N2O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ppbng" - chebi: "CHEBI:58126" - kegg.compound: "C00931" - metanetx.chemical: "MNXM554" - sbo: "SBO:0000247" - - !!omap - - id: "s_1373" - - name: "potassium" - - compartment: "c" - - formula: "K" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1373" + - name: "potassium" + - compartment: "c" + - formula: "K" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "k" - chebi: "CHEBI:26216" - kegg.compound: "C00238" - metanetx.chemical: "MNXM77881" - sbo: "SBO:0000247" - - !!omap - - id: "s_1374" - - name: "potassium" - - compartment: "e" - - formula: "K" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1374" + - name: "potassium" + - compartment: "e" + - formula: "K" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "k" - chebi: "CHEBI:26216" - kegg.compound: "C00238" - metanetx.chemical: "MNXM77881" - sbo: "SBO:0000247" - - !!omap - - id: "s_1375" - - name: "precorrin-2" - - compartment: "c" - - formula: "C42H41N4O16" - - charge: -7 - - annotation: !!omap + - !!omap + - id: "s_1375" + - name: "precorrin-2" + - compartment: "c" + - formula: "C42H41N4O16" + - charge: -7 + - annotation: !!omap - bigg.metabolite: "dscl" - chebi: "CHEBI:58827" - kegg.compound: "C02463" - metanetx.chemical: "MNXM672" - sbo: "SBO:0000247" - - !!omap - - id: "s_1376" - - name: "prenyl diphosphate(3-)" - - compartment: "c" - - formula: "C5H9O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1376" + - name: "prenyl diphosphate(3-)" + - compartment: "c" + - formula: "C5H9O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "dmpp" - chebi: "CHEBI:57623" - kegg.compound: "C00235" - metanetx.chemical: "MNXM132" - sbo: "SBO:0000247" - - !!omap - - id: "s_1377" - - name: "prephenate" - - compartment: "c" - - formula: "C10H8O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1377" + - name: "prephenate" + - compartment: "c" + - formula: "C10H8O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pphn" - chebi: "CHEBI:29934" - kegg.compound: "C00254" - metanetx.chemical: "MNXM503" - sbo: "SBO:0000247" - - !!omap - - id: "s_1378" - - name: "preuroporphyrinogen" - - compartment: "c" - - formula: "C40H38N4O17" - - charge: -8 - - annotation: !!omap + - !!omap + - id: "s_1378" + - name: "preuroporphyrinogen" + - compartment: "c" + - formula: "C40H38N4O17" + - charge: -8 + - annotation: !!omap - bigg.metabolite: "hmbil" - chebi: "CHEBI:57845" - kegg.compound: "C01024" - metanetx.chemical: "MNXM547" - sbo: "SBO:0000247" - - !!omap - - id: "s_1379" - - name: "Pro-tRNA(Pro)" - - compartment: "c" - - formula: "C5H9NOR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1379" + - name: "Pro-tRNA(Pro)" + - compartment: "c" + - formula: "C5H9NOR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "protrna" - chebi: "CHEBI:29154" - kegg.compound: "C02702" - metanetx.chemical: "MNXM247" - sbo: "SBO:0000247" - - !!omap - - id: "s_1382" - - name: "propionyl-CoA" - - compartment: "m" - - formula: "C24H36N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1382" + - name: "propionyl-CoA" + - compartment: "m" + - formula: "C24H36N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ppcoa" - chebi: "CHEBI:57386" - kegg.compound: "C00100" - metanetx.chemical: "MNXM86" - sbo: "SBO:0000247" - - !!omap - - id: "s_1383" - - name: "protoporphyrin" - - compartment: "m" - - formula: "C34H32N4O4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1383" + - name: "protoporphyrin" + - compartment: "m" + - formula: "C34H32N4O4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "ppp9" - chebi: "CHEBI:36159" - kegg.compound: "C02191" - metanetx.chemical: "MNXM346" - sbo: "SBO:0000247" - - !!omap - - id: "s_1384" - - name: "protoporphyrinogen" - - compartment: "c" - - formula: "C34H38N4O4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1384" + - name: "protoporphyrinogen" + - compartment: "c" + - formula: "C34H38N4O4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pppg9" - chebi: "CHEBI:57307" - kegg.compound: "C01079" - metanetx.chemical: "MNXM351" - sbo: "SBO:0000247" - - !!omap - - id: "s_1385" - - name: "protoporphyrinogen" - - compartment: "m" - - formula: "C34H38N4O4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1385" + - name: "protoporphyrinogen" + - compartment: "m" + - formula: "C34H38N4O4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pppg9" - chebi: "CHEBI:57307" - kegg.compound: "C01079" - metanetx.chemical: "MNXM351" - sbo: "SBO:0000247" - - !!omap - - id: "s_1386" - - name: "PRPP" - - compartment: "c" - - formula: "C5H8O14P3" - - charge: -5 - - annotation: !!omap + - !!omap + - id: "s_1386" + - name: "PRPP" + - compartment: "c" + - formula: "C5H8O14P3" + - charge: -5 + - annotation: !!omap - bigg.metabolite: "prpp" - chebi: "CHEBI:58017" - kegg.compound: "C00119" - metanetx.chemical: "MNXM91" - sbo: "SBO:0000247" - - !!omap - - id: "s_1387" - - name: "PRPP" - - compartment: "m" - - formula: "C5H8O14P3" - - charge: -5 - - annotation: !!omap + - !!omap + - id: "s_1387" + - name: "PRPP" + - compartment: "m" + - formula: "C5H8O14P3" + - charge: -5 + - annotation: !!omap - bigg.metabolite: "prpp" - chebi: "CHEBI:58017" - kegg.compound: "C00119" - metanetx.chemical: "MNXM91" - sbo: "SBO:0000247" - - !!omap - - id: "s_1388" - - name: "pseudouridine 5'-phosphate" - - compartment: "c" - - formula: "C9H11N2O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1388" + - name: "pseudouridine 5'-phosphate" + - compartment: "c" + - formula: "C9H11N2O9P" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:58380" - kegg.compound: "C01168" - metanetx.chemical: "MNXM2276" - sbo: "SBO:0000247" - - !!omap - - id: "s_1389" - - name: "putrescine" - - compartment: "c" - - formula: "C4H14N2" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_1389" + - name: "putrescine" + - compartment: "c" + - formula: "C4H14N2" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "ptrc" - chebi: "CHEBI:326268" - kegg.compound: "C00134" - metanetx.chemical: "MNXM118" - sbo: "SBO:0000247" - - !!omap - - id: "s_1390" - - name: "putrescine" - - compartment: "e" - - formula: "C4H14N2" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_1390" + - name: "putrescine" + - compartment: "e" + - formula: "C4H14N2" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "ptrc" - chebi: "CHEBI:326268" - kegg.compound: "C00134" - metanetx.chemical: "MNXM118" - sbo: "SBO:0000247" - - !!omap - - id: "s_1391" - - name: "putrescine" - - compartment: "v" - - formula: "C4H14N2" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_1391" + - name: "putrescine" + - compartment: "v" + - formula: "C4H14N2" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "ptrc" - chebi: "CHEBI:326268" - kegg.compound: "C00134" - metanetx.chemical: "MNXM118" - sbo: "SBO:0000247" - - !!omap - - id: "s_1392" - - name: "pyridoxal" - - compartment: "c" - - formula: "C8H9NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1392" + - name: "pyridoxal" + - compartment: "c" + - formula: "C8H9NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pydx" - chebi: "CHEBI:17310" - kegg.compound: "C00250" - metanetx.chemical: "MNXM311" - sbo: "SBO:0000247" - - !!omap - - id: "s_1393" - - name: "pyridoxal 5'-phosphate" - - compartment: "c" - - formula: "C8H8NO6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1393" + - name: "pyridoxal 5'-phosphate" + - compartment: "c" + - formula: "C8H8NO6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pydx5p" - chebi: "CHEBI:597326" - kegg.compound: "C00018" - metanetx.chemical: "MNXM161" - sbo: "SBO:0000247" - - !!omap - - id: "s_1394" - - name: "pyridoxamine" - - compartment: "c" - - formula: "C8H13N2O2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1394" + - name: "pyridoxamine" + - compartment: "c" + - formula: "C8H13N2O2" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "pydam" - chebi: "CHEBI:57761" - kegg.compound: "C00534" - metanetx.chemical: "MNXM548" - sbo: "SBO:0000247" - - !!omap - - id: "s_1395" - - name: "pyridoxamine 5'-phosphate" - - compartment: "c" - - formula: "C8H12N2O5P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1395" + - name: "pyridoxamine 5'-phosphate" + - compartment: "c" + - formula: "C8H12N2O5P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "pyam5p" - chebi: "CHEBI:58451" - kegg.compound: "C00647" - metanetx.chemical: "MNXM366" - sbo: "SBO:0000247" - - !!omap - - id: "s_1396" - - name: "pyridoxine" - - compartment: "c" - - formula: "C8H11NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1396" + - name: "pyridoxine" + - compartment: "c" + - formula: "C8H11NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pydxn" - chebi: "CHEBI:16709" - kegg.compound: "C00314" - metanetx.chemical: "MNXM419" - sbo: "SBO:0000247" - - !!omap - - id: "s_1397" - - name: "pyridoxine" - - compartment: "e" - - formula: "C8H11NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1397" + - name: "pyridoxine" + - compartment: "e" + - formula: "C8H11NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pydxn" - chebi: "CHEBI:16709" - kegg.compound: "C00314" - metanetx.chemical: "MNXM419" - sbo: "SBO:0000247" - - !!omap - - id: "s_1398" - - name: "pyridoxine 5'-phosphate" - - compartment: "c" - - formula: "C8H10NO6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1398" + - name: "pyridoxine 5'-phosphate" + - compartment: "c" + - formula: "C8H10NO6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pdx5p" - chebi: "CHEBI:58589" - kegg.compound: "C00627" - metanetx.chemical: "MNXM454" - sbo: "SBO:0000247" - - !!omap - - id: "s_1399" - - name: "pyruvate" - - compartment: "c" - - formula: "C3H3O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1399" + - name: "pyruvate" + - compartment: "c" + - formula: "C3H3O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "pyr" - chebi: "CHEBI:15361" - kegg.compound: "C00022" - metanetx.chemical: "MNXM23" - sbo: "SBO:0000247" - - !!omap - - id: "s_1400" - - name: "pyruvate" - - compartment: "e" - - formula: "C3H3O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1400" + - name: "pyruvate" + - compartment: "e" + - formula: "C3H3O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "pyr" - chebi: "CHEBI:15361" - kegg.compound: "C00022" - metanetx.chemical: "MNXM23" - sbo: "SBO:0000247" - - !!omap - - id: "s_1401" - - name: "pyruvate" - - compartment: "m" - - formula: "C3H3O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1401" + - name: "pyruvate" + - compartment: "m" + - formula: "C3H3O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "pyr" - chebi: "CHEBI:15361" - kegg.compound: "C00022" - metanetx.chemical: "MNXM23" - sbo: "SBO:0000247" - - !!omap - - id: "s_1403" - - name: "quinolinate" - - compartment: "c" - - formula: "C7H3NO4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1403" + - name: "quinolinate" + - compartment: "c" + - formula: "C7H3NO4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "quln" - chebi: "CHEBI:29959" - kegg.compound: "C03722" - metanetx.chemical: "MNXM555" - sbo: "SBO:0000247" - - !!omap - - id: "s_1404" - - name: "quinolinate" - - compartment: "m" - - formula: "C7H3NO4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1404" + - name: "quinolinate" + - compartment: "m" + - formula: "C7H3NO4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "quln" - chebi: "CHEBI:29959" - kegg.compound: "C03722" - metanetx.chemical: "MNXM555" - sbo: "SBO:0000247" - - !!omap - - id: "s_1405" - - name: "riboflavin" - - compartment: "c" - - formula: "C17H19N4O6" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1405" + - name: "riboflavin" + - compartment: "c" + - formula: "C17H19N4O6" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ribflv" - chebi: "CHEBI:57986" - kegg.compound: "C00255" - metanetx.chemical: "MNXM270" - sbo: "SBO:0000247" - - !!omap - - id: "s_1406" - - name: "riboflavin" - - compartment: "e" - - formula: "C17H19N4O6" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1406" + - name: "riboflavin" + - compartment: "e" + - formula: "C17H19N4O6" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ribflv" - chebi: "CHEBI:57986" - kegg.compound: "C00255" - metanetx.chemical: "MNXM270" - sbo: "SBO:0000247" - - !!omap - - id: "s_1407" - - name: "riboflavin" - - compartment: "m" - - formula: "C17H19N4O6" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1407" + - name: "riboflavin" + - compartment: "m" + - formula: "C17H19N4O6" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ribflv" - chebi: "CHEBI:57986" - kegg.compound: "C00255" - metanetx.chemical: "MNXM270" - sbo: "SBO:0000247" - - !!omap - - id: "s_1408" - - name: "ribose-5-phosphate" - - compartment: "c" - - formula: "C5H9O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1408" + - name: "ribose-5-phosphate" + - compartment: "c" + - formula: "C5H9O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "r5p" - chebi: "CHEBI:18189" - kegg.compound: "C03736" - metanetx.chemical: "MNXM15900" - sbo: "SBO:0000247" - - !!omap - - id: "s_1409" - - name: "S(8)-aminomethyldihydrolipoamide" - - compartment: "m" - - formula: "C9H21N2OS2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1409" + - name: "S(8)-aminomethyldihydrolipoamide" + - compartment: "m" + - formula: "C9H21N2OS2" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "alpam" - chebi: "CHEBI:50622" - metanetx.chemical: "MNXM81220" - sbo: "SBO:0000247" - - !!omap - - id: "s_1410" - - name: "S(8)-aminomethyldihydrolipoylprotein" - - compartment: "m" - - formula: "C9H19N2OS2R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1410" + - name: "S(8)-aminomethyldihydrolipoylprotein" + - compartment: "m" + - formula: "C9H19N2OS2R" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "alpro" - chebi: "CHEBI:16882" - kegg.compound: "C01242" - metanetx.chemical: "MNXM81221" - sbo: "SBO:0000247" - - !!omap - - id: "s_1411" - - name: "S(8)-succinyldihydrolipoamide" - - compartment: "m" - - formula: "C12H20NO4S2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1411" + - name: "S(8)-succinyldihydrolipoamide" + - compartment: "m" + - formula: "C12H20NO4S2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "sdhlam" - chebi: "CHEBI:17432" - kegg.compound: "C01169" - metanetx.chemical: "MNXM3710" - sbo: "SBO:0000247" - - !!omap - - id: "s_1412" - - name: "S-adenosyl-4-methylthio-2-oxobutanoate" - - compartment: "c" - - formula: "C15H19N5O6S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1412" + - name: "S-adenosyl-4-methylthio-2-oxobutanoate" + - compartment: "c" + - formula: "C15H19N5O6S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "amob" - chebi: "CHEBI:16490" - kegg.compound: "C04425" - metanetx.chemical: "MNXM3090" - sbo: "SBO:0000247" - - !!omap - - id: "s_1413" - - name: "S-adenosyl-L-homocysteine" - - compartment: "c" - - formula: "C14H20N6O5S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1413" + - name: "S-adenosyl-L-homocysteine" + - compartment: "c" + - formula: "C14H20N6O5S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ahcys" - chebi: "CHEBI:16680" - kegg.compound: "C00021" - metanetx.chemical: "MNXM19" - sbo: "SBO:0000247" - - !!omap - - id: "s_1415" - - name: "S-adenosyl-L-homocysteine" - - compartment: "m" - - formula: "C14H20N6O5S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1415" + - name: "S-adenosyl-L-homocysteine" + - compartment: "m" + - formula: "C14H20N6O5S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ahcys" - chebi: "CHEBI:16680" - kegg.compound: "C00021" - metanetx.chemical: "MNXM19" - sbo: "SBO:0000247" - - !!omap - - id: "s_1416" - - name: "S-adenosyl-L-methionine" - - compartment: "c" - - formula: "C15H23N6O5S" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1416" + - name: "S-adenosyl-L-methionine" + - compartment: "c" + - formula: "C15H23N6O5S" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "amet" - chebi: "CHEBI:15414" - kegg.compound: "C00019" - metanetx.chemical: "MNXM16" - sbo: "SBO:0000247" - - !!omap - - id: "s_1418" - - name: "S-adenosyl-L-methionine" - - compartment: "e" - - formula: "C15H23N6O5S" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1418" + - name: "S-adenosyl-L-methionine" + - compartment: "e" + - formula: "C15H23N6O5S" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "amet" - chebi: "CHEBI:15414" - kegg.compound: "C00019" - metanetx.chemical: "MNXM16" - sbo: "SBO:0000247" - - !!omap - - id: "s_1419" - - name: "S-adenosyl-L-methionine" - - compartment: "m" - - formula: "C15H23N6O5S" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1419" + - name: "S-adenosyl-L-methionine" + - compartment: "m" + - formula: "C15H23N6O5S" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "amet" - chebi: "CHEBI:15414" - kegg.compound: "C00019" - metanetx.chemical: "MNXM16" - sbo: "SBO:0000247" - - !!omap - - id: "s_1420" - - name: "S-adenosylmethioninamine" - - compartment: "c" - - formula: "C14H24N6O3S" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_1420" + - name: "S-adenosylmethioninamine" + - compartment: "c" + - formula: "C14H24N6O3S" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "ametam" - chebi: "CHEBI:57443" - kegg.compound: "C01137" - metanetx.chemical: "MNXM321" - sbo: "SBO:0000247" - - !!omap - - id: "s_1421" - - name: "S-formylglutathione" - - compartment: "c" - - formula: "C11H16N3O7S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1421" + - name: "S-formylglutathione" + - compartment: "c" + - formula: "C11H16N3O7S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "Sfglutth" - chebi: "CHEBI:57688" - kegg.compound: "C01031" - metanetx.chemical: "MNXM952" - sbo: "SBO:0000247" - - !!omap - - id: "s_1422" - - name: "S-methyl-5-thio-alpha-D-ribose 1-phosphate" - - compartment: "c" - - formula: "C6H11O7PS" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1422" + - name: "S-methyl-5-thio-alpha-D-ribose 1-phosphate" + - compartment: "c" + - formula: "C6H11O7PS" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "5mdr1p" - chebi: "CHEBI:58533" - kegg.compound: "C04188" - metanetx.chemical: "MNXM407" - sbo: "SBO:0000247" - - !!omap - - id: "s_1423" - - name: "S-methyl-5-thio-D-ribulose 1-phosphate" - - compartment: "c" - - formula: "C6H11O7PS" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1423" + - name: "S-methyl-5-thio-D-ribulose 1-phosphate" + - compartment: "c" + - formula: "C6H11O7PS" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "5mdru1p" - chebi: "CHEBI:58548" - kegg.compound: "C04582" - metanetx.chemical: "MNXM522" - sbo: "SBO:0000247" - - !!omap - - id: "s_1424" - - name: "S-methyl-L-methionine" - - compartment: "c" - - formula: "C6H14NO2S" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1424" + - name: "S-methyl-L-methionine" + - compartment: "c" + - formula: "C6H14NO2S" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "mmet" - chebi: "CHEBI:17728" - kegg.compound: "C03172" - metanetx.chemical: "MNXM1119" - sbo: "SBO:0000247" - - !!omap - - id: "s_1425" - - name: "S-methyl-L-methionine" - - compartment: "e" - - formula: "C6H14NO2S" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1425" + - name: "S-methyl-L-methionine" + - compartment: "e" + - formula: "C6H14NO2S" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "mmet" - chebi: "CHEBI:17728" - kegg.compound: "C03172" - metanetx.chemical: "MNXM1119" - sbo: "SBO:0000247" - - !!omap - - id: "s_1426" - - name: "sedoheptulose 1,7-bisphosphate" - - compartment: "c" - - formula: "C7H12O13P2" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1426" + - name: "sedoheptulose 1,7-bisphosphate" + - compartment: "c" + - formula: "C7H12O13P2" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "s17bp" - chebi: "CHEBI:58335" - kegg.compound: "C00447" - metanetx.chemical: "MNXM1294" - sbo: "SBO:0000247" - - !!omap - - id: "s_1427" - - name: "sedoheptulose 7-phosphate" - - compartment: "c" - - formula: "C7H13O10P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1427" + - name: "sedoheptulose 7-phosphate" + - compartment: "c" + - formula: "C7H13O10P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "s7p" - chebi: "CHEBI:57483" - kegg.compound: "C05382" - metanetx.chemical: "MNXM271" - sbo: "SBO:0000247" - - !!omap - - id: "s_1428" - - name: "Ser-tRNA(Ser)" - - compartment: "c" - - formula: "C3H7NO2R" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1428" + - name: "Ser-tRNA(Ser)" + - compartment: "c" + - formula: "C3H7NO2R" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "sertrna" - chebi: "CHEBI:29162" - kegg.compound: "C02553" - metanetx.chemical: "MNXM165150" - sbo: "SBO:0000247" - - !!omap - - id: "s_1429" - - name: "shikimate" - - compartment: "c" - - formula: "C7H9O5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1429" + - name: "shikimate" + - compartment: "c" + - formula: "C7H9O5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "skm" - chebi: "CHEBI:36208" - kegg.compound: "C00493" - metanetx.chemical: "MNXM602" - sbo: "SBO:0000247" - - !!omap - - id: "s_1430" - - name: "siroheme" - - compartment: "c" - - formula: "C42H36FeN4O16" - - charge: -8 - - annotation: !!omap + - !!omap + - id: "s_1430" + - name: "siroheme" + - compartment: "c" + - formula: "C42H36FeN4O16" + - charge: -8 + - annotation: !!omap - bigg.metabolite: "sheme" - chebi: "CHEBI:60052" - kegg.compound: "C00748" - metanetx.chemical: "MNXM82173" - sbo: "SBO:0000247" - - !!omap - - id: "s_1431" - - name: "sirohydrochlorin" - - compartment: "c" - - formula: "C42H38N4O16" - - charge: -8 - - annotation: !!omap + - !!omap + - id: "s_1431" + - name: "sirohydrochlorin" + - compartment: "c" + - formula: "C42H38N4O16" + - charge: -8 + - annotation: !!omap - bigg.metabolite: "scl" - chebi: "CHEBI:58351" - kegg.compound: "C05778" - metanetx.chemical: "MNXM863" - sbo: "SBO:0000247" - - !!omap - - id: "s_1432" - - name: "sn-glycero-3-phosphocholine" - - compartment: "ce" - - formula: "C8H20NO6P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1432" + - name: "sn-glycero-3-phosphocholine" + - compartment: "ce" + - formula: "C8H20NO6P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "g3pc" - chebi: "CHEBI:16870" - kegg.compound: "C00670" - metanetx.chemical: "MNXM367" - sbo: "SBO:0000247" - - !!omap - - id: "s_1433" - - name: "sn-glycero-3-phosphocholine" - - compartment: "c" - - formula: "C8H20NO6P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1433" + - name: "sn-glycero-3-phosphocholine" + - compartment: "c" + - formula: "C8H20NO6P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "g3pc" - chebi: "CHEBI:16870" - kegg.compound: "C00670" - metanetx.chemical: "MNXM367" - sbo: "SBO:0000247" - - !!omap - - id: "s_1435" - - name: "sn-glycero-3-phosphocholine" - - compartment: "e" - - formula: "C8H20NO6P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1435" + - name: "sn-glycero-3-phosphocholine" + - compartment: "e" + - formula: "C8H20NO6P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "g3pc" - chebi: "CHEBI:16870" - kegg.compound: "C00670" - metanetx.chemical: "MNXM367" - sbo: "SBO:0000247" - - !!omap - - id: "s_1437" - - name: "sodium" - - compartment: "c" - - formula: "Na" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1437" + - name: "sodium" + - compartment: "c" + - formula: "Na" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "na1" - chebi: "CHEBI:26708" - kegg.compound: "C01330" - metanetx.chemical: "MNXM82334" - sbo: "SBO:0000247" - - !!omap - - id: "s_1438" - - name: "sodium" - - compartment: "e" - - formula: "Na" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1438" + - name: "sodium" + - compartment: "e" + - formula: "Na" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "na1" - chebi: "CHEBI:26708" - kegg.compound: "C01330" - metanetx.chemical: "MNXM82334" - sbo: "SBO:0000247" - - !!omap - - id: "s_1439" - - name: "spermidine" - - compartment: "c" - - formula: "C7H22N3" - - charge: 3 - - annotation: !!omap + - !!omap + - id: "s_1439" + - name: "spermidine" + - compartment: "c" + - formula: "C7H22N3" + - charge: 3 + - annotation: !!omap - bigg.metabolite: "spmd" - chebi: "CHEBI:57834" - kegg.compound: "C00315" - metanetx.chemical: "MNXM124" - sbo: "SBO:0000247" - - !!omap - - id: "s_1440" - - name: "spermidine" - - compartment: "e" - - formula: "C7H22N3" - - charge: 3 - - annotation: !!omap + - !!omap + - id: "s_1440" + - name: "spermidine" + - compartment: "e" + - formula: "C7H22N3" + - charge: 3 + - annotation: !!omap - bigg.metabolite: "spmd" - chebi: "CHEBI:57834" - kegg.compound: "C00315" - metanetx.chemical: "MNXM124" - sbo: "SBO:0000247" - - !!omap - - id: "s_1441" - - name: "spermidine" - - compartment: "v" - - formula: "C7H22N3" - - charge: 3 - - annotation: !!omap + - !!omap + - id: "s_1441" + - name: "spermidine" + - compartment: "v" + - formula: "C7H22N3" + - charge: 3 + - annotation: !!omap - bigg.metabolite: "spmd" - chebi: "CHEBI:57834" - kegg.compound: "C00315" - metanetx.chemical: "MNXM124" - sbo: "SBO:0000247" - - !!omap - - id: "s_1442" - - name: "spermine" - - compartment: "c" - - formula: "C10H30N4" - - charge: 4 - - annotation: !!omap + - !!omap + - id: "s_1442" + - name: "spermine" + - compartment: "c" + - formula: "C10H30N4" + - charge: 4 + - annotation: !!omap - bigg.metabolite: "sprm" - chebi: "CHEBI:45725" - kegg.compound: "C00750" - metanetx.chemical: "MNXM408" - sbo: "SBO:0000247" - - !!omap - - id: "s_1443" - - name: "spermine" - - compartment: "e" - - formula: "C10H30N4" - - charge: 4 - - annotation: !!omap + - !!omap + - id: "s_1443" + - name: "spermine" + - compartment: "e" + - formula: "C10H30N4" + - charge: 4 + - annotation: !!omap - bigg.metabolite: "sprm" - chebi: "CHEBI:45725" - kegg.compound: "C00750" - metanetx.chemical: "MNXM408" - sbo: "SBO:0000247" - - !!omap - - id: "s_1444" - - name: "spermine" - - compartment: "v" - - formula: "C10H30N4" - - charge: 4 - - annotation: !!omap + - !!omap + - id: "s_1444" + - name: "spermine" + - compartment: "v" + - formula: "C10H30N4" + - charge: 4 + - annotation: !!omap - bigg.metabolite: "sprm" - chebi: "CHEBI:45725" - kegg.compound: "C00750" - metanetx.chemical: "MNXM408" - sbo: "SBO:0000247" - - !!omap - - id: "s_1445" - - name: "sphinganine" - - compartment: "er" - - formula: "C18H40NO2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1445" + - name: "sphinganine" + - compartment: "er" + - formula: "C18H40NO2" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "sphgn" - chebi: "CHEBI:57817" - kegg.compound: "C00836" - metanetx.chemical: "MNXM302" - sbo: "SBO:0000247" - - !!omap - - id: "s_1446" - - name: "sphinganine 1-phosphate" - - compartment: "er" - - formula: "C18H39NO5P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1446" + - name: "sphinganine 1-phosphate" + - compartment: "er" + - formula: "C18H39NO5P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "sph1p" - chebi: "CHEBI:57939" - kegg.compound: "C01120" - metanetx.chemical: "MNXM487" - sbo: "SBO:0000247" - - !!omap - - id: "s_1447" - - name: "squalene" - - compartment: "c" - - formula: "C30H50" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1447" + - name: "squalene" + - compartment: "c" + - formula: "C30H50" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "sql" - chebi: "CHEBI:15440" - kegg.compound: "C00751" - metanetx.chemical: "MNXM292" - sbo: "SBO:0000247" - - !!omap - - id: "s_1448" - - name: "squalene" - - compartment: "er" - - formula: "C30H50" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1448" + - name: "squalene" + - compartment: "er" + - formula: "C30H50" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "sql" - chebi: "CHEBI:15440" - kegg.compound: "C00751" - metanetx.chemical: "MNXM292" - sbo: "SBO:0000247" - - !!omap - - id: "s_1449" - - name: "stearate" - - compartment: "c" - - formula: "C18H35O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1449" + - name: "stearate" + - compartment: "c" + - formula: "C18H35O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ocdca" - chebi: "CHEBI:25629" - kegg.compound: "C01530" - metanetx.chemical: "MNXM236" - sbo: "SBO:0000247" - - !!omap - - id: "s_1450" - - name: "stearate" - - compartment: "e" - - formula: "C18H35O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1450" + - name: "stearate" + - compartment: "e" + - formula: "C18H35O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ocdca" - chebi: "CHEBI:25629" - kegg.compound: "C01530" - metanetx.chemical: "MNXM236" - sbo: "SBO:0000247" - - !!omap - - id: "s_1451" - - name: "stearate" - - compartment: "p" - - formula: "C18H35O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1451" + - name: "stearate" + - compartment: "p" + - formula: "C18H35O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ocdca" - chebi: "CHEBI:25629" - kegg.compound: "C01530" - metanetx.chemical: "MNXM236" - sbo: "SBO:0000247" - - !!omap - - id: "s_1454" - - name: "stearoyl-CoA" - - compartment: "c" - - formula: "C39H66N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1454" + - name: "stearoyl-CoA" + - compartment: "c" + - formula: "C39H66N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "stcoa" - chebi: "CHEBI:57394" - kegg.compound: "C00412" - metanetx.chemical: "MNXM272" - sbo: "SBO:0000247" - - !!omap - - id: "s_1457" - - name: "stearoyl-CoA" - - compartment: "p" - - formula: "C39H66N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1457" + - name: "stearoyl-CoA" + - compartment: "p" + - formula: "C39H66N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "stcoa" - chebi: "CHEBI:57394" - kegg.compound: "C00412" - metanetx.chemical: "MNXM272" - sbo: "SBO:0000247" - - !!omap - - id: "s_1458" - - name: "succinate" - - compartment: "c" - - formula: "C4H4O4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1458" + - name: "succinate" + - compartment: "c" + - formula: "C4H4O4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "succ" - chebi: "CHEBI:30031" - kegg.compound: "C00042" - metanetx.chemical: "MNXM25" - sbo: "SBO:0000247" - - !!omap - - id: "s_1459" - - name: "succinate" - - compartment: "e" - - formula: "C4H4O4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1459" + - name: "succinate" + - compartment: "e" + - formula: "C4H4O4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "succ" - chebi: "CHEBI:30031" - kegg.compound: "C00042" - metanetx.chemical: "MNXM25" - sbo: "SBO:0000247" - - !!omap - - id: "s_1460" - - name: "succinate" - - compartment: "m" - - formula: "C4H4O4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1460" + - name: "succinate" + - compartment: "m" + - formula: "C4H4O4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "succ" - chebi: "CHEBI:30031" - kegg.compound: "C00042" - metanetx.chemical: "MNXM25" - sbo: "SBO:0000247" - - !!omap - - id: "s_1461" - - name: "succinic semialdehyde" - - compartment: "c" - - formula: "C4H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1461" + - name: "succinic semialdehyde" + - compartment: "c" + - formula: "C4H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "sucsal" - chebi: "CHEBI:57706" - kegg.compound: "C00232" - metanetx.chemical: "MNXM172" - sbo: "SBO:0000247" - - !!omap - - id: "s_1464" - - name: "succinyl-CoA" - - compartment: "m" - - formula: "C25H35N7O19P3S" - - charge: -5 - - annotation: !!omap + - !!omap + - id: "s_1464" + - name: "succinyl-CoA" + - compartment: "m" + - formula: "C25H35N7O19P3S" + - charge: -5 + - annotation: !!omap - bigg.metabolite: "succoa" - chebi: "CHEBI:57292" - kegg.compound: "C00091" - metanetx.chemical: "MNXM92" - sbo: "SBO:0000247" - - !!omap - - id: "s_1466" - - name: "sucrose" - - compartment: "e" - - formula: "C12H22O11" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1466" + - name: "sucrose" + - compartment: "e" + - formula: "C12H22O11" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "sucr" - chebi: "CHEBI:17992" - kegg.compound: "C00089" - metanetx.chemical: "MNXM167" - sbo: "SBO:0000247" - - !!omap - - id: "s_1467" - - name: "sulphate" - - compartment: "c" - - formula: "O4S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1467" + - name: "sulphate" + - compartment: "c" + - formula: "O4S" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "so4" - chebi: "CHEBI:16189" - kegg.compound: "C00059" - metanetx.chemical: "MNXM58" - sbo: "SBO:0000247" - - !!omap - - id: "s_1468" - - name: "sulphate" - - compartment: "e" - - formula: "O4S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1468" + - name: "sulphate" + - compartment: "e" + - formula: "O4S" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "so4" - chebi: "CHEBI:16189" - kegg.compound: "C00059" - metanetx.chemical: "MNXM58" - sbo: "SBO:0000247" - - !!omap - - id: "s_1469" - - name: "sulphite" - - compartment: "c" - - formula: "O3S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1469" + - name: "sulphite" + - compartment: "c" + - formula: "O3S" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "so3" - chebi: "CHEBI:17137" - kegg.compound: "C11481" - metanetx.chemical: "MNXM105630" - sbo: "SBO:0000247" - - !!omap - - id: "s_1470" - - name: "sulphite" - - compartment: "e" - - formula: "O3S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1470" + - name: "sulphite" + - compartment: "e" + - formula: "O3S" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "so3" - chebi: "CHEBI:17137" - kegg.compound: "C11481" - metanetx.chemical: "MNXM105630" - sbo: "SBO:0000247" - - !!omap - - id: "s_1471" - - name: "taurine" - - compartment: "c" - - formula: "C2H7NO3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1471" + - name: "taurine" + - compartment: "c" + - formula: "C2H7NO3S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "taur" - chebi: "CHEBI:15891" - kegg.compound: "C00245" - metanetx.chemical: "MNXM282" - sbo: "SBO:0000247" - - !!omap - - id: "s_1472" - - name: "taurine" - - compartment: "e" - - formula: "C2H7NO3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1472" + - name: "taurine" + - compartment: "e" + - formula: "C2H7NO3S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "taur" - chebi: "CHEBI:15891" - kegg.compound: "C00245" - metanetx.chemical: "MNXM282" - sbo: "SBO:0000247" - - !!omap - - id: "s_1473" - - name: "taurocholic acid" - - compartment: "c" - - formula: "C26H44NO7S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1473" + - name: "taurocholic acid" + - compartment: "c" + - formula: "C26H44NO7S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "tchola" - chebi: "CHEBI:36257" - kegg.compound: "C05122" - metanetx.chemical: "MNXM2288" - sbo: "SBO:0000247" - - !!omap - - id: "s_1474" - - name: "taurocholic acid" - - compartment: "v" - - formula: "C26H44NO7S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1474" + - name: "taurocholic acid" + - compartment: "v" + - formula: "C26H44NO7S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "tchola" - chebi: "CHEBI:36257" - kegg.compound: "C05122" - metanetx.chemical: "MNXM2288" - sbo: "SBO:0000247" - - !!omap - - id: "s_1475" - - name: "TDP" - - compartment: "c" - - formula: "C12H16N4O7P2S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1475" + - name: "TDP" + - compartment: "c" + - formula: "C12H16N4O7P2S" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "thmpp" - chebi: "CHEBI:45931" - kegg.compound: "C00068" - metanetx.chemical: "MNXM256" - sbo: "SBO:0000247" - - !!omap - - id: "s_1476" - - name: "TDP" - - compartment: "e" - - formula: "C12H16N4O7P2S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1476" + - name: "TDP" + - compartment: "e" + - formula: "C12H16N4O7P2S" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "thmpp" - chebi: "CHEBI:45931" - kegg.compound: "C00068" - metanetx.chemical: "MNXM256" - sbo: "SBO:0000247" - - !!omap - - id: "s_1477" - - name: "TDP" - - compartment: "m" - - formula: "C12H16N4O7P2S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1477" + - name: "TDP" + - compartment: "m" + - formula: "C12H16N4O7P2S" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "thmpp" - chebi: "CHEBI:45931" - kegg.compound: "C00068" - metanetx.chemical: "MNXM256" - sbo: "SBO:0000247" - - !!omap - - id: "s_1479" - - name: "tetracosanoyl-CoA" - - compartment: "c" - - formula: "C45H78N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1479" + - name: "tetracosanoyl-CoA" + - compartment: "c" + - formula: "C45H78N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ttccoa" - chebi: "CHEBI:52974" - kegg.compound: "C16529" - metanetx.chemical: "MNXM1504" - sbo: "SBO:0000247" - - !!omap - - id: "s_1480" - - name: "tetracosanoyl-CoA" - - compartment: "er" - - formula: "C45H78N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1480" + - name: "tetracosanoyl-CoA" + - compartment: "er" + - formula: "C45H78N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ttccoa" - chebi: "CHEBI:52974" - kegg.compound: "C16529" - metanetx.chemical: "MNXM1504" - sbo: "SBO:0000247" - - !!omap - - id: "s_1482" - - name: "tetracosanoyl-CoA" - - compartment: "p" - - formula: "C45H78N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1482" + - name: "tetracosanoyl-CoA" + - compartment: "p" + - formula: "C45H78N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ttccoa" - chebi: "CHEBI:52974" - kegg.compound: "C16529" - metanetx.chemical: "MNXM1504" - sbo: "SBO:0000247" - - !!omap - - id: "s_1483" - - name: "tetradecaprenyl diphosphate" - - compartment: "lp" - - formula: "C70H113O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1483" + - name: "tetradecaprenyl diphosphate" + - compartment: "lp" + - formula: "C70H113O7P2" + - charge: -3 + - annotation: !!omap - chebi: "CHEBI:53039" - metanetx.chemical: "MNXM83846" - sbo: "SBO:0000247" - - !!omap - - id: "s_1486" - - name: "tetrahydropteroyltri-L-glutamic acid" - - compartment: "c" - - formula: "C29H33N9O12" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1486" + - name: "tetrahydropteroyltri-L-glutamic acid" + - compartment: "c" + - formula: "C29H33N9O12" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "hpglu" - chebi: "CHEBI:58140" - kegg.compound: "C04144" - metanetx.chemical: "MNXM2563" - sbo: "SBO:0000247" - - !!omap - - id: "s_1487" - - name: "THF" - - compartment: "c" - - formula: "C19H21N7O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1487" + - name: "THF" + - compartment: "c" + - formula: "C19H21N7O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "thf" - chebi: "CHEBI:20506" - kegg.compound: "C00101" - metanetx.chemical: "MNXM79" - sbo: "SBO:0000247" - - !!omap - - id: "s_1488" - - name: "THF" - - compartment: "m" - - formula: "C19H21N7O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1488" + - name: "THF" + - compartment: "m" + - formula: "C19H21N7O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "thf" - chebi: "CHEBI:20506" - kegg.compound: "C00101" - metanetx.chemical: "MNXM79" - sbo: "SBO:0000247" - - !!omap - - id: "s_1489" - - name: "thiamine" - - compartment: "c" - - formula: "C12H17N4OS" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1489" + - name: "thiamine" + - compartment: "c" + - formula: "C12H17N4OS" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "thm" - chebi: "CHEBI:18385" - kegg.compound: "C00378" - metanetx.chemical: "MNXM322" - sbo: "SBO:0000247" - - !!omap - - id: "s_1490" - - name: "thiamine" - - compartment: "e" - - formula: "C12H17N4OS" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1490" + - name: "thiamine" + - compartment: "e" + - formula: "C12H17N4OS" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "thm" - chebi: "CHEBI:18385" - kegg.compound: "C00378" - metanetx.chemical: "MNXM322" - sbo: "SBO:0000247" - - !!omap - - id: "s_1491" - - name: "Thr-tRNA(Thr)" - - compartment: "c" - - formula: "C4H9NO2R" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1491" + - name: "Thr-tRNA(Thr)" + - compartment: "c" + - formula: "C4H9NO2R" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "thrtrna" - chebi: "CHEBI:29163" - kegg.compound: "C02992" - metanetx.chemical: "MNXM89895" - sbo: "SBO:0000247" - - !!omap - - id: "s_1492" - - name: "Thr-tRNA(Thr)" - - compartment: "m" - - formula: "C4H9NO2R" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1492" + - name: "Thr-tRNA(Thr)" + - compartment: "m" + - formula: "C4H9NO2R" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "thrtrna" - chebi: "CHEBI:29163" - kegg.compound: "C02992" - metanetx.chemical: "MNXM89895" - sbo: "SBO:0000247" - - !!omap - - id: "s_1493" - - name: "thymidine" - - compartment: "c" - - formula: "C10H14N2O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1493" + - name: "thymidine" + - compartment: "c" + - formula: "C10H14N2O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "thymd" - chebi: "CHEBI:17748" - kegg.compound: "C00214" - metanetx.chemical: "MNXM420" - sbo: "SBO:0000247" - - !!omap - - id: "s_1494" - - name: "thymidine" - - compartment: "e" - - formula: "C10H14N2O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1494" + - name: "thymidine" + - compartment: "e" + - formula: "C10H14N2O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "thymd" - chebi: "CHEBI:17748" - kegg.compound: "C00214" - metanetx.chemical: "MNXM420" - sbo: "SBO:0000247" - - !!omap - - id: "s_1497" - - name: "TMP" - - compartment: "c" - - formula: "C12H16N4O4PS" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1497" + - name: "TMP" + - compartment: "c" + - formula: "C12H16N4O4PS" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "thmmp" - chebi: "CHEBI:9533" - kegg.compound: "C01081" - metanetx.chemical: "MNXM662" - sbo: "SBO:0000247" - - !!omap - - id: "s_1498" - - name: "TMP" - - compartment: "e" - - formula: "C12H16N4O4PS" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1498" + - name: "TMP" + - compartment: "e" + - formula: "C12H16N4O4PS" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "thmmp" - chebi: "CHEBI:9533" - kegg.compound: "C01081" - metanetx.chemical: "MNXM662" - sbo: "SBO:0000247" - - !!omap - - id: "s_1503" - - name: "trans-aconitate" - - compartment: "c" - - formula: "C6H3O6" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1503" + - name: "trans-aconitate" + - compartment: "c" + - formula: "C6H3O6" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "acon_T" - chebi: "CHEBI:15708" - kegg.compound: "C02341" - metanetx.chemical: "MNXM1388" - sbo: "SBO:0000247" - - !!omap - - id: "s_1504" - - name: "trans-aconitate" - - compartment: "m" - - formula: "C6H3O6" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1504" + - name: "trans-aconitate" + - compartment: "m" + - formula: "C6H3O6" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "acon_T" - chebi: "CHEBI:15708" - kegg.compound: "C02341" - metanetx.chemical: "MNXM1388" - sbo: "SBO:0000247" - - !!omap - - id: "s_1507" - - name: "trans-dec-2-enoyl-CoA" - - compartment: "p" - - formula: "C31H48N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1507" + - name: "trans-dec-2-enoyl-CoA" + - compartment: "p" + - formula: "C31H48N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "dc2coa" - chebi: "CHEBI:61406" - kegg.compound: "C05275" - metanetx.chemical: "MNXM580" - sbo: "SBO:0000247" - - !!omap - - id: "s_1510" - - name: "trans-dodec-2-enoyl-CoA" - - compartment: "p" - - formula: "C33H52N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1510" + - name: "trans-dodec-2-enoyl-CoA" + - compartment: "p" + - formula: "C33H52N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "dd2coa" - chebi: "CHEBI:57330" - kegg.compound: "C03221" - metanetx.chemical: "MNXM642" - sbo: "SBO:0000247" - - !!omap - - id: "s_1513" - - name: "trans-hexacos-2-enoyl-CoA" - - compartment: "p" - - formula: "C47H80N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1513" + - name: "trans-hexacos-2-enoyl-CoA" + - compartment: "p" + - formula: "C47H80N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "hxc2coa" - chebi: "CHEBI:52975" - metanetx.chemical: "MNXM114303" - sbo: "SBO:0000247" - - !!omap - - id: "s_1516" - - name: "trans-octadec-2-enoyl-CoA" - - compartment: "p" - - formula: "C39H64N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1516" + - name: "trans-octadec-2-enoyl-CoA" + - compartment: "p" + - formula: "C39H64N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "od2coa" - chebi: "CHEBI:50570" - kegg.compound: "C16218" - metanetx.chemical: "MNXM954" - sbo: "SBO:0000247" - - !!omap - - id: "s_1519" - - name: "trans-tetradec-2-enoyl-CoA" - - compartment: "p" - - formula: "C35H56N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1519" + - name: "trans-tetradec-2-enoyl-CoA" + - compartment: "p" + - formula: "C35H56N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "td2coa" - chebi: "CHEBI:61405" - kegg.compound: "C05273" - metanetx.chemical: "MNXM654" - sbo: "SBO:0000247" - - !!omap - - id: "s_1520" - - name: "trehalose" - - compartment: "c" - - formula: "C12H22O11" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1520" + - name: "trehalose" + - compartment: "c" + - formula: "C12H22O11" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "tre" - chebi: "CHEBI:16551" - kegg.compound: "C01083" - metanetx.chemical: "MNXM198" - sbo: "SBO:0000247" - - !!omap - - id: "s_1521" - - name: "trehalose" - - compartment: "e" - - formula: "C12H22O11" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1521" + - name: "trehalose" + - compartment: "e" + - formula: "C12H22O11" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "tre" - chebi: "CHEBI:16551" - kegg.compound: "C01083" - metanetx.chemical: "MNXM198" - sbo: "SBO:0000247" - - !!omap - - id: "s_1522" - - name: "trehalose" - - compartment: "v" - - formula: "C12H22O11" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1522" + - name: "trehalose" + - compartment: "v" + - formula: "C12H22O11" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "tre" - chebi: "CHEBI:16551" - kegg.compound: "C01083" - metanetx.chemical: "MNXM198" - sbo: "SBO:0000247" - - !!omap - - id: "s_1523" - - name: "tridecaprenyl diphosphate" - - compartment: "lp" - - formula: "C65H105O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1523" + - name: "tridecaprenyl diphosphate" + - compartment: "lp" + - formula: "C65H105O7P2" + - charge: -3 + - annotation: !!omap - chebi: "CHEBI:53040" - metanetx.chemical: "MNXM5721" - sbo: "SBO:0000247" - - !!omap - - id: "s_1524" - - name: "triglyceride backbone" - - compartment: "c" - - formula: "C3H2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1524" + - name: "triglyceride backbone" + - compartment: "c" + - formula: "C3H2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "tag_cho" - chebi: "CHEBI:17855" - kegg.compound: "C00422" - metanetx.chemical: "MNXM248" - sbo: "SBO:0000649" - - !!omap - - id: "s_1526" - - name: "trimethylenediamine" - - compartment: "c" - - formula: "C3H12N2" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_1526" + - name: "trimethylenediamine" + - compartment: "c" + - formula: "C3H12N2" + - charge: 2 + - annotation: !!omap - chebi: "CHEBI:57484" - kegg.compound: "C00986" - metanetx.chemical: "MNXM350" - sbo: "SBO:0000247" - - !!omap - - id: "s_1527" - - name: "Trp-tRNA(Trp)" - - compartment: "c" - - formula: "C11H12N2OR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1527" + - name: "Trp-tRNA(Trp)" + - compartment: "c" + - formula: "C11H12N2OR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "trptrna" - chebi: "CHEBI:29159" - kegg.compound: "C03512" - metanetx.chemical: "MNXM89804" - sbo: "SBO:0000247" - - !!omap - - id: "s_1528" - - name: "Trp-tRNA(Trp)" - - compartment: "m" - - formula: "C11H12N2OR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1528" + - name: "Trp-tRNA(Trp)" + - compartment: "m" + - formula: "C11H12N2OR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "trptrna" - chebi: "CHEBI:29159" - kegg.compound: "C03512" - metanetx.chemical: "MNXM89804" - sbo: "SBO:0000247" - - !!omap - - id: "s_1529" - - name: "tryptophol" - - compartment: "c" - - formula: "C10H11NO" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1529" + - name: "tryptophol" + - compartment: "c" + - formula: "C10H11NO" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ind3eth" - chebi: "CHEBI:17890" - kegg.compound: "C00955" - metanetx.chemical: "MNXM1686" - sbo: "SBO:0000247" - - !!omap - - id: "s_1530" - - name: "tryptophol" - - compartment: "e" - - formula: "C10H11NO" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1530" + - name: "tryptophol" + - compartment: "e" + - formula: "C10H11NO" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ind3eth" - chebi: "CHEBI:17890" - kegg.compound: "C00955" - metanetx.chemical: "MNXM1686" - sbo: "SBO:0000247" - - !!omap - - id: "s_1531" - - name: "tryptophol" - - compartment: "m" - - formula: "C10H11NO" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1531" + - name: "tryptophol" + - compartment: "m" + - formula: "C10H11NO" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ind3eth" - chebi: "CHEBI:17890" - kegg.compound: "C00955" - metanetx.chemical: "MNXM1686" - sbo: "SBO:0000247" - - !!omap - - id: "s_1532" - - name: "thiamine(1+) triphosphate(4-)" - - compartment: "c" - - formula: "C12H16N4O10P3S" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1532" + - name: "thiamine(1+) triphosphate(4-)" + - compartment: "c" + - formula: "C12H16N4O10P3S" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "thmtp" - chebi: "CHEBI:58938" - kegg.compound: "C03028" - metanetx.chemical: "MNXM1341" - sbo: "SBO:0000247" - - !!omap - - id: "s_1533" - - name: "Tyr-tRNA(Tyr)" - - compartment: "c" - - formula: "C9H11NO2R" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1533" + - name: "Tyr-tRNA(Tyr)" + - compartment: "c" + - formula: "C9H11NO2R" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "tyrtrna" - chebi: "CHEBI:29161" - kegg.compound: "C02839" - metanetx.chemical: "MNXM89822" - sbo: "SBO:0000247" - - !!omap - - id: "s_1534" - - name: "Tyr-tRNA(Tyr)" - - compartment: "m" - - formula: "C9H11NO2R" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1534" + - name: "Tyr-tRNA(Tyr)" + - compartment: "m" + - formula: "C9H11NO2R" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "tyrtrna" - chebi: "CHEBI:29161" - kegg.compound: "C02839" - metanetx.chemical: "MNXM89822" - sbo: "SBO:0000247" - - !!omap - - id: "s_1535" - - name: "ubiquinol-6" - - compartment: "m" - - formula: "C39H60O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1535" + - name: "ubiquinol-6" + - compartment: "m" + - formula: "C39H60O4" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:52970" - kegg.compound: "C00390" - metanetx.chemical: "MNXM5319" - sbo: "SBO:0000247" - - !!omap - - id: "s_1537" - - name: "ubiquinone-6" - - compartment: "m" - - formula: "C39H58O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1537" + - name: "ubiquinone-6" + - compartment: "m" + - formula: "C39H58O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "q6" - chebi: "CHEBI:52971" - kegg.compound: "C17568" - metanetx.chemical: "MNXM1783" - sbo: "SBO:0000247" - - !!omap - - id: "s_1538" - - name: "UDP" - - compartment: "c" - - formula: "C9H11N2O12P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1538" + - name: "UDP" + - compartment: "c" + - formula: "C9H11N2O12P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "udp" - chebi: "CHEBI:58223" - kegg.compound: "C00015" - metanetx.chemical: "MNXM17" - sbo: "SBO:0000247" - - !!omap - - id: "s_1539" - - name: "UDP" - - compartment: "g" - - formula: "C9H11N2O12P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1539" + - name: "UDP" + - compartment: "g" + - formula: "C9H11N2O12P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "udp" - chebi: "CHEBI:58223" - kegg.compound: "C00015" - metanetx.chemical: "MNXM17" - sbo: "SBO:0000247" - - !!omap - - id: "s_1540" - - name: "UDP" - - compartment: "n" - - formula: "C9H11N2O12P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1540" + - name: "UDP" + - compartment: "n" + - formula: "C9H11N2O12P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "udp" - chebi: "CHEBI:58223" - kegg.compound: "C00015" - metanetx.chemical: "MNXM17" - sbo: "SBO:0000247" - - !!omap - - id: "s_1541" - - name: "UDP-D-galactose" - - compartment: "c" - - formula: "C15H22N2O17P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1541" + - name: "UDP-D-galactose" + - compartment: "c" + - formula: "C15H22N2O17P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "udpgal" - chebi: "CHEBI:58439" - kegg.compound: "C00052" - metanetx.chemical: "MNXM89795" - sbo: "SBO:0000247" - - !!omap - - id: "s_1542" - - name: "UDP-D-galactose" - - compartment: "g" - - formula: "C15H22N2O17P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1542" + - name: "UDP-D-galactose" + - compartment: "g" + - formula: "C15H22N2O17P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "udpgal" - chebi: "CHEBI:58439" - kegg.compound: "C00052" - metanetx.chemical: "MNXM89795" - sbo: "SBO:0000247" - - !!omap - - id: "s_1543" - - name: "UDP-D-glucose" - - compartment: "c" - - formula: "C15H22N2O17P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1543" + - name: "UDP-D-glucose" + - compartment: "c" + - formula: "C15H22N2O17P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "udpg" - chebi: "CHEBI:58367" - kegg.compound: "C00029" - metanetx.chemical: "MNXM722710" - sbo: "SBO:0000247" - - !!omap - - id: "s_1544" - - name: "UDP-N-acetyl-alpha-D-glucosamine" - - compartment: "c" - - formula: "C17H25N3O17P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1544" + - name: "UDP-N-acetyl-alpha-D-glucosamine" + - compartment: "c" + - formula: "C17H25N3O17P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "uacgam" - chebi: "CHEBI:57705" - kegg.compound: "C00043" - metanetx.chemical: "MNXM47" - sbo: "SBO:0000247" - - !!omap - - id: "s_1545" - - name: "UMP" - - compartment: "c" - - formula: "C9H11N2O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1545" + - name: "UMP" + - compartment: "c" + - formula: "C9H11N2O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "ump" - chebi: "CHEBI:57865" - kegg.compound: "C00105" - metanetx.chemical: "MNXM80" - sbo: "SBO:0000247" - - !!omap - - id: "s_1546" - - name: "UMP" - - compartment: "g" - - formula: "C9H11N2O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1546" + - name: "UMP" + - compartment: "g" + - formula: "C9H11N2O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "ump" - chebi: "CHEBI:57865" - kegg.compound: "C00105" - metanetx.chemical: "MNXM80" - sbo: "SBO:0000247" - - !!omap - - id: "s_1547" - - name: "UMP" - - compartment: "m" - - formula: "C9H11N2O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1547" + - name: "UMP" + - compartment: "m" + - formula: "C9H11N2O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "ump" - chebi: "CHEBI:57865" - kegg.compound: "C00105" - metanetx.chemical: "MNXM80" - sbo: "SBO:0000247" - - !!omap - - id: "s_1548" - - name: "UMP" - - compartment: "n" - - formula: "C9H11N2O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1548" + - name: "UMP" + - compartment: "n" + - formula: "C9H11N2O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "ump" - chebi: "CHEBI:57865" - kegg.compound: "C00105" - metanetx.chemical: "MNXM80" - sbo: "SBO:0000247" - - !!omap - - id: "s_1549" - - name: "undecaprenyl diphosphate" - - compartment: "lp" - - formula: "C55H89O7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_1549" + - name: "undecaprenyl diphosphate" + - compartment: "lp" + - formula: "C55H89O7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "udcpdp" - chebi: "CHEBI:53042" - kegg.compound: "C03543" - metanetx.chemical: "MNXM5043" - sbo: "SBO:0000247" - - !!omap - - id: "s_1550" - - name: "uracil" - - compartment: "c" - - formula: "C4H4N2O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1550" + - name: "uracil" + - compartment: "c" + - formula: "C4H4N2O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ura" - chebi: "CHEBI:17568" - kegg.compound: "C00106" - metanetx.chemical: "MNXM158" - sbo: "SBO:0000247" - - !!omap - - id: "s_1551" - - name: "uracil" - - compartment: "e" - - formula: "C4H4N2O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1551" + - name: "uracil" + - compartment: "e" + - formula: "C4H4N2O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ura" - chebi: "CHEBI:17568" - kegg.compound: "C00106" - metanetx.chemical: "MNXM158" - sbo: "SBO:0000247" - - !!omap - - id: "s_1552" - - name: "urea" - - compartment: "c" - - formula: "CH4N2O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1552" + - name: "urea" + - compartment: "c" + - formula: "CH4N2O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "urea" - chebi: "CHEBI:16199" - kegg.compound: "C00086" - metanetx.chemical: "MNXM117" - sbo: "SBO:0000247" - - !!omap - - id: "s_1553" - - name: "urea" - - compartment: "e" - - formula: "CH4N2O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1553" + - name: "urea" + - compartment: "e" + - formula: "CH4N2O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "urea" - chebi: "CHEBI:16199" - kegg.compound: "C00086" - metanetx.chemical: "MNXM117" - sbo: "SBO:0000247" - - !!omap - - id: "s_1554" - - name: "urea-1-carboxylic acid" - - compartment: "c" - - formula: "C2H3N2O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1554" + - name: "urea-1-carboxylic acid" + - compartment: "c" + - formula: "C2H3N2O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "allphn" - chebi: "CHEBI:15832" - kegg.compound: "C01010" - metanetx.chemical: "MNXM1122" - sbo: "SBO:0000247" - - !!omap - - id: "s_1555" - - name: "ureidoglycolic acid" - - compartment: "c" - - formula: "C3H5N2O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1555" + - name: "ureidoglycolic acid" + - compartment: "c" + - formula: "C3H5N2O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "urdglyc" - chebi: "CHEBI:49050" - kegg.compound: "C05241" - metanetx.chemical: "MNXM490" - sbo: "SBO:0000247" - - !!omap - - id: "s_1556" - - name: "uridine" - - compartment: "c" - - formula: "C9H12N2O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1556" + - name: "uridine" + - compartment: "c" + - formula: "C9H12N2O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "uri" - chebi: "CHEBI:16704" - kegg.compound: "C00299" - metanetx.chemical: "MNXM288" - sbo: "SBO:0000247" - - !!omap - - id: "s_1557" - - name: "uridine" - - compartment: "e" - - formula: "C9H12N2O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1557" + - name: "uridine" + - compartment: "e" + - formula: "C9H12N2O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "uri" - chebi: "CHEBI:16704" - kegg.compound: "C00299" - metanetx.chemical: "MNXM288" - sbo: "SBO:0000247" - - !!omap - - id: "s_1558" - - name: "uroporphyrinogen III" - - compartment: "c" - - formula: "C40H36N4O16" - - charge: -8 - - annotation: !!omap + - !!omap + - id: "s_1558" + - name: "uroporphyrinogen III" + - compartment: "c" + - formula: "C40H36N4O16" + - charge: -8 + - annotation: !!omap - bigg.metabolite: "uppg3" - chebi: "CHEBI:57308" - kegg.compound: "C01051" - metanetx.chemical: "MNXM414" - sbo: "SBO:0000247" - - !!omap - - id: "s_1559" - - name: "UTP" - - compartment: "c" - - formula: "C9H11N2O15P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1559" + - name: "UTP" + - compartment: "c" + - formula: "C9H11N2O15P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "utp" - chebi: "CHEBI:46398" - kegg.compound: "C00075" - metanetx.chemical: "MNXM121" - sbo: "SBO:0000247" - - !!omap - - id: "s_1560" - - name: "UTP" - - compartment: "m" - - formula: "C9H11N2O15P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_1560" + - name: "UTP" + - compartment: "m" + - formula: "C9H11N2O15P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "utp" - chebi: "CHEBI:46398" - kegg.compound: "C00075" - metanetx.chemical: "MNXM121" - sbo: "SBO:0000247" - - !!omap - - id: "s_1561" - - name: "Val-tRNA(Val)" - - compartment: "c" - - formula: "C5H11NOR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1561" + - name: "Val-tRNA(Val)" + - compartment: "c" + - formula: "C5H11NOR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "valtrna" - chebi: "CHEBI:29164" - kegg.compound: "C02554" - metanetx.chemical: "MNXM90110" - sbo: "SBO:0000247" - - !!omap - - id: "s_1562" - - name: "Val-tRNA(Val)" - - compartment: "m" - - formula: "C5H11NOR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1562" + - name: "Val-tRNA(Val)" + - compartment: "m" + - formula: "C5H11NOR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "valtrna" - chebi: "CHEBI:29164" - kegg.compound: "C02554" - metanetx.chemical: "MNXM90110" - sbo: "SBO:0000247" - - !!omap - - id: "s_1563" - - name: "xanthosine" - - compartment: "c" - - formula: "C10H12N4O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1563" + - name: "xanthosine" + - compartment: "c" + - formula: "C10H12N4O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "xtsn" - chebi: "CHEBI:18107" - kegg.compound: "C01762" - metanetx.chemical: "MNXM687" - sbo: "SBO:0000247" - - !!omap - - id: "s_1564" - - name: "xanthosine" - - compartment: "e" - - formula: "C10H12N4O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1564" + - name: "xanthosine" + - compartment: "e" + - formula: "C10H12N4O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "xtsn" - chebi: "CHEBI:18107" - kegg.compound: "C01762" - metanetx.chemical: "MNXM687" - sbo: "SBO:0000247" - - !!omap - - id: "s_1565" - - name: "xanthosine-5-phosphate" - - compartment: "c" - - formula: "C10H11N4O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_1565" + - name: "xanthosine-5-phosphate" + - compartment: "c" + - formula: "C10H11N4O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "xmp" - chebi: "CHEBI:57464" - kegg.compound: "C00655" - metanetx.chemical: "MNXM298" - sbo: "SBO:0000247" - - !!omap - - id: "s_1566" - - name: "xylitol" - - compartment: "c" - - formula: "C5H12O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1566" + - name: "xylitol" + - compartment: "c" + - formula: "C5H12O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "xylt" - chebi: "CHEBI:17151" - kegg.compound: "C00379" - metanetx.chemical: "MNXM510" - sbo: "SBO:0000247" - - !!omap - - id: "s_1567" - - name: "xylitol" - - compartment: "e" - - formula: "C5H12O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1567" + - name: "xylitol" + - compartment: "e" + - formula: "C5H12O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "xylt" - chebi: "CHEBI:17151" - kegg.compound: "C00379" - metanetx.chemical: "MNXM510" - sbo: "SBO:0000247" - - !!omap - - id: "s_1568" - - name: "zymosterol" - - compartment: "ce" - - formula: "C27H44O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1568" + - name: "zymosterol" + - compartment: "ce" + - formula: "C27H44O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "zymst" - chebi: "CHEBI:18252" - kegg.compound: "C05437" - metanetx.chemical: "MNXM574" - sbo: "SBO:0000247" - - !!omap - - id: "s_1569" - - name: "zymosterol" - - compartment: "c" - - formula: "C27H44O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1569" + - name: "zymosterol" + - compartment: "c" + - formula: "C27H44O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "zymst" - chebi: "CHEBI:18252" - kegg.compound: "C05437" - metanetx.chemical: "MNXM574" - sbo: "SBO:0000247" - - !!omap - - id: "s_1571" - - name: "zymosterol" - - compartment: "e" - - formula: "C27H44O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1571" + - name: "zymosterol" + - compartment: "e" + - formula: "C27H44O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "zymst" - chebi: "CHEBI:18252" - kegg.compound: "C05437" - metanetx.chemical: "MNXM574" - sbo: "SBO:0000247" - - !!omap - - id: "s_1572" - - name: "zymosterol" - - compartment: "lp" - - formula: "C27H44O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1572" + - name: "zymosterol" + - compartment: "lp" + - formula: "C27H44O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "zymst" - chebi: "CHEBI:18252" - kegg.compound: "C05437" - metanetx.chemical: "MNXM574" - sbo: "SBO:0000247" - - !!omap - - id: "s_1576" - - name: "zymosterol intermediate 1a" - - compartment: "c" - - formula: "C28H46O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1576" + - name: "zymosterol intermediate 1a" + - compartment: "c" + - formula: "C28H46O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "M00963" - chebi: "CHEBI:52388" - metanetx.chemical: "MNXM89469" - sbo: "SBO:0000247" - - !!omap - - id: "s_1577" - - name: "zymosterol intermediate 1b" - - compartment: "c" - - formula: "C28H44O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1577" + - name: "zymosterol intermediate 1b" + - compartment: "c" + - formula: "C28H44O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "M00959" - chebi: "CHEBI:52615" - metanetx.chemical: "MNXM89470" - sbo: "SBO:0000247" - - !!omap - - id: "s_1578" - - name: "zymosterol intermediate 1c" - - compartment: "c" - - formula: "C28H43O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_1578" + - name: "zymosterol intermediate 1c" + - compartment: "c" + - formula: "C28H43O3" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:52389" - metanetx.chemical: "MNXM89471" - sbo: "SBO:0000247" - - !!omap - - id: "s_1579" - - name: "zymosterol intermediate 2" - - compartment: "c" - - formula: "C27H42O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1579" + - name: "zymosterol intermediate 2" + - compartment: "c" + - formula: "C27H42O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "M01067" - chebi: "CHEBI:52386" - metanetx.chemical: "MNXM2876" - sbo: "SBO:0000247" - - !!omap - - id: "s_1582" - - name: "tRNA(Ala)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1582" + - name: "tRNA(Ala)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaala" - chebi: "CHEBI:29170" - kegg.compound: "C01635" - metanetx.chemical: "MNXM89576" - sbo: "SBO:0000247" - - !!omap - - id: "s_1583" - - name: "tRNA(Arg)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1583" + - name: "tRNA(Arg)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaarg" - chebi: "CHEBI:29171" - kegg.compound: "C01636" - metanetx.chemical: "MNXM90751" - sbo: "SBO:0000247" - - !!omap - - id: "s_1584" - - name: "tRNA(Arg)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1584" + - name: "tRNA(Arg)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaarg" - chebi: "CHEBI:29171" - kegg.compound: "C01636" - metanetx.chemical: "MNXM90751" - sbo: "SBO:0000247" - - !!omap - - id: "s_1585" - - name: "tRNA(Asn)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1585" + - name: "tRNA(Asn)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaasn" - chebi: "CHEBI:29172" - kegg.compound: "C01637" - metanetx.chemical: "MNXM90665" - sbo: "SBO:0000247" - - !!omap - - id: "s_1586" - - name: "tRNA(Asn)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1586" + - name: "tRNA(Asn)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaasn" - chebi: "CHEBI:29172" - kegg.compound: "C01637" - metanetx.chemical: "MNXM90665" - sbo: "SBO:0000247" - - !!omap - - id: "s_1587" - - name: "tRNA(Asp)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1587" + - name: "tRNA(Asp)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaasp" - chebi: "CHEBI:29186" - kegg.compound: "C01638" - metanetx.chemical: "MNXM90752" - sbo: "SBO:0000247" - - !!omap - - id: "s_1588" - - name: "tRNA(Asp)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1588" + - name: "tRNA(Asp)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaasp" - chebi: "CHEBI:29186" - kegg.compound: "C01638" - metanetx.chemical: "MNXM90752" - sbo: "SBO:0000247" - - !!omap - - id: "s_1589" - - name: "tRNA(Cys)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1589" + - name: "tRNA(Cys)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnacys" - chebi: "CHEBI:29167" - kegg.compound: "C01639" - metanetx.chemical: "MNXM162355" - sbo: "SBO:0000247" - - !!omap - - id: "s_1590" - - name: "tRNA(Gln)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1590" + - name: "tRNA(Gln)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnagln" - chebi: "CHEBI:29168" - kegg.compound: "C01640" - metanetx.chemical: "MNXM71" - sbo: "SBO:0000247" - - !!omap - - id: "s_1591" - - name: "tRNA(Glu)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1591" + - name: "tRNA(Glu)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaglu" - chebi: "CHEBI:29175" - kegg.compound: "C01641" - metanetx.chemical: "MNXM90886" - sbo: "SBO:0000247" - - !!omap - - id: "s_1592" - - name: "tRNA(Glu)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1592" + - name: "tRNA(Glu)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaglu" - chebi: "CHEBI:29175" - kegg.compound: "C01641" - metanetx.chemical: "MNXM90886" - sbo: "SBO:0000247" - - !!omap - - id: "s_1593" - - name: "tRNA(Gly)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1593" + - name: "tRNA(Gly)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnagly" - chebi: "CHEBI:29176" - kegg.compound: "C01642" - metanetx.chemical: "MNXM90340" - sbo: "SBO:0000247" - - !!omap - - id: "s_1594" - - name: "tRNA(His)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1594" + - name: "tRNA(His)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnahis" - chebi: "CHEBI:29178" - kegg.compound: "C01643" - metanetx.chemical: "MNXM90878" - sbo: "SBO:0000247" - - !!omap - - id: "s_1595" - - name: "tRNA(His)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1595" + - name: "tRNA(His)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnahis" - chebi: "CHEBI:29178" - kegg.compound: "C01643" - metanetx.chemical: "MNXM90878" - sbo: "SBO:0000247" - - !!omap - - id: "s_1596" - - name: "tRNA(Ile)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1596" + - name: "tRNA(Ile)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaile" - chebi: "CHEBI:29174" - kegg.compound: "C01644" - metanetx.chemical: "MNXM90879" - sbo: "SBO:0000247" - - !!omap - - id: "s_1597" - - name: "tRNA(Ile)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1597" + - name: "tRNA(Ile)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaile" - chebi: "CHEBI:29174" - kegg.compound: "C01644" - metanetx.chemical: "MNXM90879" - sbo: "SBO:0000247" - - !!omap - - id: "s_1598" - - name: "tRNA(Leu)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1598" + - name: "tRNA(Leu)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaleu" - chebi: "CHEBI:29169" - kegg.compound: "C01645" - metanetx.chemical: "MNXM90880" - sbo: "SBO:0000247" - - !!omap - - id: "s_1599" - - name: "tRNA(Leu)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1599" + - name: "tRNA(Leu)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaleu" - chebi: "CHEBI:29169" - kegg.compound: "C01645" - metanetx.chemical: "MNXM90880" - sbo: "SBO:0000247" - - !!omap - - id: "s_1600" - - name: "tRNA(Lys)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1600" + - name: "tRNA(Lys)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnalys" - chebi: "CHEBI:29185" - kegg.compound: "C01646" - metanetx.chemical: "MNXM90881" - sbo: "SBO:0000247" - - !!omap - - id: "s_1601" - - name: "tRNA(Lys)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1601" + - name: "tRNA(Lys)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnalys" - chebi: "CHEBI:29185" - kegg.compound: "C01646" - metanetx.chemical: "MNXM90881" - sbo: "SBO:0000247" - - !!omap - - id: "s_1602" - - name: "tRNA(Met)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1602" + - name: "tRNA(Met)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnamet" - chebi: "CHEBI:29173" - kegg.compound: "C01647" - metanetx.chemical: "MNXM90882" - sbo: "SBO:0000247" - - !!omap - - id: "s_1603" - - name: "tRNA(Met)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1603" + - name: "tRNA(Met)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnamet" - chebi: "CHEBI:29173" - kegg.compound: "C01647" - metanetx.chemical: "MNXM90882" - sbo: "SBO:0000247" - - !!omap - - id: "s_1604" - - name: "tRNA(Phe)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1604" + - name: "tRNA(Phe)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaphe" - chebi: "CHEBI:29184" - kegg.compound: "C01648" - metanetx.chemical: "MNXM90753" - sbo: "SBO:0000247" - - !!omap - - id: "s_1605" - - name: "tRNA(Phe)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1605" + - name: "tRNA(Phe)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaphe" - chebi: "CHEBI:29184" - kegg.compound: "C01648" - metanetx.chemical: "MNXM90753" - sbo: "SBO:0000247" - - !!omap - - id: "s_1606" - - name: "tRNA(Pro)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1606" + - name: "tRNA(Pro)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnapro" - chebi: "CHEBI:29177" - kegg.compound: "C01649" - metanetx.chemical: "MNXM90667" - sbo: "SBO:0000247" - - !!omap - - id: "s_1607" - - name: "tRNA(Ser)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1607" + - name: "tRNA(Ser)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaser" - chebi: "CHEBI:29179" - kegg.compound: "C01650" - metanetx.chemical: "MNXM91028" - sbo: "SBO:0000247" - - !!omap - - id: "s_1608" - - name: "tRNA(Thr)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1608" + - name: "tRNA(Thr)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnathr" - chebi: "CHEBI:29180" - kegg.compound: "C01651" - metanetx.chemical: "MNXM90883" - sbo: "SBO:0000247" - - !!omap - - id: "s_1609" - - name: "tRNA(Thr)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1609" + - name: "tRNA(Thr)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnathr" - chebi: "CHEBI:29180" - kegg.compound: "C01651" - metanetx.chemical: "MNXM90883" - sbo: "SBO:0000247" - - !!omap - - id: "s_1610" - - name: "tRNA(Trp)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1610" + - name: "tRNA(Trp)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnatrp" - chebi: "CHEBI:29181" - kegg.compound: "C01652" - metanetx.chemical: "MNXM90755" - sbo: "SBO:0000247" - - !!omap - - id: "s_1611" - - name: "tRNA(Trp)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1611" + - name: "tRNA(Trp)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnatrp" - chebi: "CHEBI:29181" - kegg.compound: "C01652" - metanetx.chemical: "MNXM90755" - sbo: "SBO:0000247" - - !!omap - - id: "s_1612" - - name: "tRNA(Tyr)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1612" + - name: "tRNA(Tyr)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnatyr" - chebi: "CHEBI:29182" - kegg.compound: "C00787" - metanetx.chemical: "MNXM90668" - sbo: "SBO:0000247" - - !!omap - - id: "s_1613" - - name: "tRNA(Tyr)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1613" + - name: "tRNA(Tyr)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnatyr" - chebi: "CHEBI:29182" - kegg.compound: "C00787" - metanetx.chemical: "MNXM90668" - sbo: "SBO:0000247" - - !!omap - - id: "s_1614" - - name: "tRNA(Val)" - - compartment: "c" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1614" + - name: "tRNA(Val)" + - compartment: "c" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaval" - chebi: "CHEBI:29183" - kegg.compound: "C01653" - metanetx.chemical: "MNXM90885" - sbo: "SBO:0000247" - - !!omap - - id: "s_1615" - - name: "tRNA(Val)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1615" + - name: "tRNA(Val)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnaval" - chebi: "CHEBI:29183" - kegg.compound: "C01653" - metanetx.chemical: "MNXM90885" - sbo: "SBO:0000247" - - !!omap - - id: "s_1616" - - name: "TRX1" - - compartment: "c" - - formula: "C6H10N2O2S2R4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1616" + - name: "TRX1" + - compartment: "c" + - formula: "C6H10N2O2S2R4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trdrd" - chebi: "CHEBI:15033" - kegg.compound: "C00342" - metanetx.chemical: "MNXM96993" - sbo: "SBO:0000247" - - !!omap - - id: "s_1617" - - name: "TRX1" - - compartment: "m" - - formula: "C6H10N2O2S2R4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1617" + - name: "TRX1" + - compartment: "m" + - formula: "C6H10N2O2S2R4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trdrd" - chebi: "CHEBI:15033" - kegg.compound: "C00342" - metanetx.chemical: "MNXM96993" - sbo: "SBO:0000247" - - !!omap - - id: "s_1618" - - name: "TRX1" - - compartment: "n" - - formula: "C6H10N2O2S2R4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1618" + - name: "TRX1" + - compartment: "n" + - formula: "C6H10N2O2S2R4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trdrd" - chebi: "CHEBI:15033" - kegg.compound: "C00342" - metanetx.chemical: "MNXM96993" - sbo: "SBO:0000247" - - !!omap - - id: "s_1619" - - name: "TRX1" - - compartment: "p" - - formula: "C6H10N2O2S2R4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1619" + - name: "TRX1" + - compartment: "p" + - formula: "C6H10N2O2S2R4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trdrd" - chebi: "CHEBI:15033" - kegg.compound: "C00342" - metanetx.chemical: "MNXM96993" - sbo: "SBO:0000247" - - !!omap - - id: "s_1620" - - name: "TRX1 disulphide" - - compartment: "c" - - formula: "C6H9N2O2S2R4" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1620" + - name: "TRX1 disulphide" + - compartment: "c" + - formula: "C6H9N2O2S2R4" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "trdox" - chebi: "CHEBI:18191" - kegg.compound: "C00343" - metanetx.chemical: "MNXM148" - sbo: "SBO:0000247" - - !!omap - - id: "s_1621" - - name: "TRX1 disulphide" - - compartment: "m" - - formula: "C6H9N2O2S2R4" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1621" + - name: "TRX1 disulphide" + - compartment: "m" + - formula: "C6H9N2O2S2R4" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "trdox" - chebi: "CHEBI:18191" - kegg.compound: "C00343" - metanetx.chemical: "MNXM148" - sbo: "SBO:0000247" - - !!omap - - id: "s_1622" - - name: "TRX1 disulphide" - - compartment: "n" - - formula: "C6H9N2O2S2R4" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1622" + - name: "TRX1 disulphide" + - compartment: "n" + - formula: "C6H9N2O2S2R4" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "trdox" - chebi: "CHEBI:18191" - kegg.compound: "C00343" - metanetx.chemical: "MNXM148" - sbo: "SBO:0000247" - - !!omap - - id: "s_1623" - - name: "TRX1 disulphide" - - compartment: "p" - - formula: "C6H9N2O2S2R4" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_1623" + - name: "TRX1 disulphide" + - compartment: "p" + - formula: "C6H9N2O2S2R4" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "trdox" - chebi: "CHEBI:18191" - kegg.compound: "C00343" - metanetx.chemical: "MNXM148" - sbo: "SBO:0000247" - - !!omap - - id: "s_1845" - - name: "ACP1" - - compartment: "m" - - formula: "" - - charge: 0 - - annotation: !!omap - - bigg.metabolite: "ACP" - - chebi: "CHEBI:18359" - - kegg.compound: "C00229" - - metanetx.chemical: "MNXM925" - - sbo: "SBO:0000247" - - !!omap - - id: "s_2763" - - name: "kynurenic acid" - - compartment: "c" - - formula: "C10H6NO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2763" + - name: "kynurenic acid" + - compartment: "c" + - formula: "C10H6NO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "kynate" - chebi: "CHEBI:18344" - kegg.compound: "C01717" - metanetx.chemical: "MNXM1113" - sbo: "SBO:0000247" - - !!omap - - id: "s_2764" - - name: "quinaldic acid" - - compartment: "c" - - formula: "C10H7NO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2764" + - name: "quinaldic acid" + - compartment: "c" + - formula: "C10H7NO2" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:18386" - kegg.compound: "C06325" - metanetx.chemical: "MNXM4797" - sbo: "SBO:0000247" - - !!omap - - id: "s_2766" - - name: "14-demethyllanosterol" - - compartment: "e" - - formula: "C29H48O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_1845" + - name: "ACP1" + - compartment: "m" + - formula: "" + - charge: 0 + - annotation: !!omap + - bigg.metabolite: "ACP" + - chebi: "CHEBI:18359" + - kegg.compound: "C00229" + - metanetx.chemical: "MNXM925" + - sbo: "SBO:0000247" + - !!omap + - id: "s_2766" + - name: "14-demethyllanosterol" + - compartment: "e" + - formula: "C29H48O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "44mzym" - chebi: "CHEBI:18364" - kegg.compound: "C05108" - metanetx.chemical: "MNXM913" - sbo: "SBO:0000247" - - !!omap - - id: "s_2768" - - name: "ergosta-5,7,22,24(28)-tetraen-3beta-ol" - - compartment: "e" - - formula: "C28H42O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2768" + - name: "ergosta-5,7,22,24(28)-tetraen-3beta-ol" + - compartment: "e" + - formula: "C28H42O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ergtetrol" - chebi: "CHEBI:18249" - kegg.compound: "C05440" - metanetx.chemical: "MNXM1109" - sbo: "SBO:0000247" - - !!omap - - id: "s_2770" - - name: "acetoacetyl-ACP" - - compartment: "m" - - formula: "C4H5O2SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2770" + - name: "acetoacetyl-ACP" + - compartment: "m" + - formula: "C4H5O2SR" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "actACP" - chebi: "CHEBI:2393" - kegg.compound: "C05744" - metanetx.chemical: "MNXM1223" - sbo: "SBO:0000247" - - !!omap - - id: "s_2771" - - name: "butanoyl-ACP" - - compartment: "m" - - formula: "C4H7OSR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2771" + - name: "butanoyl-ACP" + - compartment: "m" + - formula: "C4H7OSR" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:3247" - kegg.compound: "C05745" - metanetx.chemical: "MNXM2645" - sbo: "SBO:0000247" - - !!omap - - id: "s_2772" - - name: "3-oxo-hexanoyl-ACP" - - compartment: "m" - - formula: "C6H9O2SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2772" + - name: "3-oxo-hexanoyl-ACP" + - compartment: "m" + - formula: "C6H9O2SR" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "3ohexACP" - chebi: "CHEBI:1642" - kegg.compound: "C05746" - metanetx.chemical: "MNXM25602" - sbo: "SBO:0000247" - - !!omap - - id: "s_2773" - - name: "hexanoyl-ACP" - - compartment: "m" - - formula: "C6H11OSR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2773" + - name: "hexanoyl-ACP" + - compartment: "m" + - formula: "C6H11OSR" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:5704" - kegg.compound: "C05749" - metanetx.chemical: "MNXM23683" - sbo: "SBO:0000247" - - !!omap - - id: "s_2774" - - name: "3-oxo-octanoyl-ACP" - - compartment: "m" - - formula: "C8H13O2SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2774" + - name: "3-oxo-octanoyl-ACP" + - compartment: "m" + - formula: "C8H13O2SR" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "3ooctACP" - chebi: "CHEBI:1646" - kegg.compound: "C05750" - metanetx.chemical: "MNXM28031" - sbo: "SBO:0000247" - - !!omap - - id: "s_2775" - - name: "3-hydroxybutanoyl-ACP" - - compartment: "m" - - formula: "C4H7O2SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2775" + - name: "3-hydroxybutanoyl-ACP" + - compartment: "m" + - formula: "C4H7O2SR" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "3hbutACP" - kegg.compound: "C04618" - sbo: "SBO:0000247" - - !!omap - - id: "s_2776" - - name: "3-hydroxyhexanoyl-ACP" - - compartment: "m" - - formula: "C6H11O2SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2776" + - name: "3-hydroxyhexanoyl-ACP" + - compartment: "m" + - formula: "C6H11O2SR" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "3hhexACP" - chebi: "CHEBI:326" - kegg.compound: "C05747" - metanetx.chemical: "MNXM25370" - sbo: "SBO:0000247" - - !!omap - - id: "s_2777" - - name: "3-hydroxyoctanoyl-ACP" - - compartment: "m" - - formula: "C8H15O2SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2777" + - name: "3-hydroxyoctanoyl-ACP" + - compartment: "m" + - formula: "C8H15O2SR" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "3hoctaACP" - chebi: "CHEBI:80387" - kegg.compound: "C16220" - metanetx.chemical: "MNXM10033" - sbo: "SBO:0000247" - - !!omap - - id: "s_2778" - - name: "trans-but-2-enoyl-ACP" - - compartment: "m" - - formula: "C4H5OSR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2778" + - name: "trans-but-2-enoyl-ACP" + - compartment: "m" + - formula: "C4H5OSR" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:132146" - sbo: "SBO:0000247" - - !!omap - - id: "s_2779" - - name: "trans-hex-2-enoyl-ACP" - - compartment: "m" - - formula: "C6H9OSR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2779" + - name: "trans-hex-2-enoyl-ACP" + - compartment: "m" + - formula: "C6H9OSR" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "thex2eACP" - chebi: "CHEBI:10727" - kegg.compound: "C05748" - metanetx.chemical: "MNXM24502" - sbo: "SBO:0000247" - - !!omap - - id: "s_2780" - - name: "trans-oct-2-enoyl-ACP" - - compartment: "m" - - formula: "C8H13OSR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2780" + - name: "trans-oct-2-enoyl-ACP" + - compartment: "m" + - formula: "C8H13OSR" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "toct2eACP" - kegg.compound: "C05751" - metanetx.chemical: "MNXM23766" - sbo: "SBO:0000247" - - !!omap - - id: "s_2781" - - name: "lauroyl-CoA" - - compartment: "erm" - - formula: "C33H54N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2781" + - name: "lauroyl-CoA" + - compartment: "erm" + - formula: "C33H54N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ddcacoa" - chebi: "CHEBI:57375" - kegg.compound: "C01832" - metanetx.chemical: "MNXM363" - sbo: "SBO:0000247" - - !!omap - - id: "s_2782" - - name: "malonyl-CoA" - - compartment: "erm" - - formula: "C24H33N7O19P3S" - - charge: -5 - - annotation: !!omap + - !!omap + - id: "s_2782" + - name: "malonyl-CoA" + - compartment: "erm" + - formula: "C24H33N7O19P3S" + - charge: -5 + - annotation: !!omap - bigg.metabolite: "malcoa" - chebi: "CHEBI:57384" - kegg.compound: "C00083" - metanetx.chemical: "MNXM40" - sbo: "SBO:0000247" - - !!omap - - id: "s_2783" - - name: "H+" - - compartment: "erm" - - formula: "H" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_2783" + - name: "H+" + - compartment: "erm" + - formula: "H" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "h" - chebi: "CHEBI:24636" - kegg.compound: "C00080" - metanetx.chemical: "MNXM1" - sbo: "SBO:0000247" - - !!omap - - id: "s_2784" - - name: "carbon dioxide" - - compartment: "erm" - - formula: "CO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2784" + - name: "carbon dioxide" + - compartment: "erm" + - formula: "CO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "co2" - chebi: "CHEBI:16526" - kegg.compound: "C00011" - metanetx.chemical: "MNXM13" - sbo: "SBO:0000247" - - !!omap - - id: "s_2785" - - name: "coenzyme A" - - compartment: "erm" - - formula: "C21H32N7O16P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2785" + - name: "coenzyme A" + - compartment: "erm" + - formula: "C21H32N7O16P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "coa" - chebi: "CHEBI:57287" - kegg.compound: "C00010" - metanetx.chemical: "MNXM12" - sbo: "SBO:0000247" - - !!omap - - id: "s_2786" - - name: "3-oxotetradecanoyl-CoA" - - compartment: "erm" - - formula: "C35H56N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2786" + - name: "3-oxotetradecanoyl-CoA" + - compartment: "erm" + - formula: "C35H56N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3otdcoa" - chebi: "CHEBI:28726" - kegg.compound: "C05261" - metanetx.chemical: "MNXM707" - sbo: "SBO:0000247" - - !!omap - - id: "s_2787" - - name: "myristoyl-CoA" - - compartment: "erm" - - formula: "C35H58N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2787" + - name: "myristoyl-CoA" + - compartment: "erm" + - formula: "C35H58N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "tdcoa" - chebi: "CHEBI:57385" - kegg.compound: "C02593" - metanetx.chemical: "MNXM224" - sbo: "SBO:0000247" - - !!omap - - id: "s_2788" - - name: "3-oxopalmitoyl-CoA" - - compartment: "erm" - - formula: "C37H60N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2788" + - name: "3-oxopalmitoyl-CoA" + - compartment: "erm" + - formula: "C37H60N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3ohdcoa" - chebi: "CHEBI:57349" - kegg.compound: "C05259" - metanetx.chemical: "MNXM738" - sbo: "SBO:0000247" - - !!omap - - id: "s_2789" - - name: "palmitoyl-CoA" - - compartment: "erm" - - formula: "C37H62N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2789" + - name: "palmitoyl-CoA" + - compartment: "erm" + - formula: "C37H62N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "pmtcoa" - chebi: "CHEBI:57379" - kegg.compound: "C00154" - metanetx.chemical: "MNXM88" - sbo: "SBO:0000247" - - !!omap - - id: "s_2790" - - name: "3-oxooctadecanoyl-CoA" - - compartment: "erm" - - formula: "C39H64N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2790" + - name: "3-oxooctadecanoyl-CoA" + - compartment: "erm" + - formula: "C39H64N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3ohodcoa" - chebi: "CHEBI:50571" - kegg.compound: "C16216" - metanetx.chemical: "MNXM513" - sbo: "SBO:0000247" - - !!omap - - id: "s_2791" - - name: "stearoyl-CoA" - - compartment: "erm" - - formula: "C39H66N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2791" + - name: "stearoyl-CoA" + - compartment: "erm" + - formula: "C39H66N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "stcoa" - chebi: "CHEBI:57394" - kegg.compound: "C00412" - metanetx.chemical: "MNXM272" - sbo: "SBO:0000247" - - !!omap - - id: "s_2792" - - name: "3-oxoicosanoyl-CoA" - - compartment: "erm" - - formula: "C41H68N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2792" + - name: "3-oxoicosanoyl-CoA" + - compartment: "erm" + - formula: "C41H68N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "CE2251" - chebi: "CHEBI:52327" - metanetx.chemical: "MNXM36762" - sbo: "SBO:0000247" - - !!omap - - id: "s_2793" - - name: "icosanoyl-CoA" - - compartment: "erm" - - formula: "C41H70N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2793" + - name: "icosanoyl-CoA" + - compartment: "erm" + - formula: "C41H70N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "arachcoa" - chebi: "CHEBI:15527" - kegg.compound: "C02041" - metanetx.chemical: "MNXM1429" - sbo: "SBO:0000247" - - !!omap - - id: "s_2794" - - name: "3-oxodocosanoyl-CoA" - - compartment: "erm" - - formula: "C43H72N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2794" + - name: "3-oxodocosanoyl-CoA" + - compartment: "erm" + - formula: "C43H72N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "CE2250" - chebi: "CHEBI:52328" - metanetx.chemical: "MNXM36756" - sbo: "SBO:0000247" - - !!omap - - id: "s_2795" - - name: "docosanoyl-CoA" - - compartment: "erm" - - formula: "C43H74N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2795" + - name: "docosanoyl-CoA" + - compartment: "erm" + - formula: "C43H74N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "docoscoa" - chebi: "CHEBI:65088" - kegg.compound: "C16528" - metanetx.chemical: "MNXM10780" - sbo: "SBO:0000247" - - !!omap - - id: "s_2796" - - name: "3-oxotetracosanoyl-CoA" - - compartment: "erm" - - formula: "C45H76N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2796" + - name: "3-oxotetracosanoyl-CoA" + - compartment: "erm" + - formula: "C45H76N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "CE2253" - chebi: "CHEBI:52329" - metanetx.chemical: "MNXM36773" - sbo: "SBO:0000247" - - !!omap - - id: "s_2797" - - name: "tetracosanoyl-CoA" - - compartment: "erm" - - formula: "C45H78N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2797" + - name: "tetracosanoyl-CoA" + - compartment: "erm" + - formula: "C45H78N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ttccoa" - chebi: "CHEBI:52974" - kegg.compound: "C16529" - metanetx.chemical: "MNXM1504" - sbo: "SBO:0000247" - - !!omap - - id: "s_2798" - - name: "3-oxohexacosanoyl-CoA" - - compartment: "erm" - - formula: "C47H80N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2798" + - name: "3-oxohexacosanoyl-CoA" + - compartment: "erm" + - formula: "C47H80N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3ohxccoa" - chebi: "CHEBI:52977" - metanetx.chemical: "MNXM36758" - sbo: "SBO:0000247" - - !!omap - - id: "s_2799" - - name: "NADPH" - - compartment: "erm" - - formula: "C21H26N7O17P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2799" + - name: "NADPH" + - compartment: "erm" + - formula: "C21H26N7O17P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "nadph" - chebi: "CHEBI:57783" - kegg.compound: "C00005" - metanetx.chemical: "MNXM6" - sbo: "SBO:0000247" - - !!omap - - id: "s_2800" - - name: "NADP(+)" - - compartment: "erm" - - formula: "C21H25N7O17P3" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_2800" + - name: "NADP(+)" + - compartment: "erm" + - formula: "C21H25N7O17P3" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "nadp" - chebi: "CHEBI:58349" - kegg.compound: "C00006" - metanetx.chemical: "MNXM5" - sbo: "SBO:0000247" - - !!omap - - id: "s_2801" - - name: "(S)-3-hydroxytetradecanoyl-CoA" - - compartment: "erm" - - formula: "C35H58N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2801" + - name: "(S)-3-hydroxytetradecanoyl-CoA" + - compartment: "erm" + - formula: "C35H58N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3htdcoa" - chebi: "CHEBI:27466" - kegg.compound: "C05260" - metanetx.chemical: "MNXM767" - sbo: "SBO:0000247" - - !!omap - - id: "s_2802" - - name: "(S)-3-hydroxypalmitoyl-CoA" - - compartment: "erm" - - formula: "C37H62N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2802" + - name: "(S)-3-hydroxypalmitoyl-CoA" + - compartment: "erm" + - formula: "C37H62N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "3hhdcoa" - chebi: "CHEBI:27402" - kegg.compound: "C05258" - metanetx.chemical: "MNXM825" - sbo: "SBO:0000247" - - !!omap - - id: "s_2803" - - name: "3-hydroxyoctadecanoyl-CoA" - - compartment: "erm" - - formula: "C39H66N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2803" + - name: "3-hydroxyoctadecanoyl-CoA" + - compartment: "erm" + - formula: "C39H66N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "CE2248" - chebi: "CHEBI:50583" - kegg.compound: "C16217" - metanetx.chemical: "MNXM1309" - sbo: "SBO:0000247" - - !!omap - - id: "s_2804" - - name: "3-hydroxyicosanoyl-CoA" - - compartment: "erm" - - formula: "C41H70N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2804" + - name: "3-hydroxyicosanoyl-CoA" + - compartment: "erm" + - formula: "C41H70N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "CE2247" - chebi: "CHEBI:52324" - metanetx.chemical: "MNXM146349" - sbo: "SBO:0000247" - - !!omap - - id: "s_2805" - - name: "3-hydroxydocosanoyl-CoA" - - compartment: "erm" - - formula: "C43H74N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2805" + - name: "3-hydroxydocosanoyl-CoA" + - compartment: "erm" + - formula: "C43H74N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "CE2246" - chebi: "CHEBI:52325" - metanetx.chemical: "MNXM162568" - sbo: "SBO:0000247" - - !!omap - - id: "s_2806" - - name: "3-hydroxytetracosanoyl-CoA" - - compartment: "erm" - - formula: "C45H78N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2806" + - name: "3-hydroxytetracosanoyl-CoA" + - compartment: "erm" + - formula: "C45H78N7O18P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "CE2249" - chebi: "CHEBI:52326" - metanetx.chemical: "MNXM36558" - sbo: "SBO:0000247" - - !!omap - - id: "s_2807" - - name: "(S)-3-hydroxyhexacosanoyl-CoA" - - compartment: "erm" - - formula: "C47H82N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2807" + - name: "(S)-3-hydroxyhexacosanoyl-CoA" + - compartment: "erm" + - formula: "C47H82N7O18P3S" + - charge: -4 + - annotation: !!omap - chebi: "CHEBI:52976" - metanetx.chemical: "MNXM31741" - sbo: "SBO:0000247" - - !!omap - - id: "s_2808" - - name: "H2O" - - compartment: "erm" - - formula: "H2O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2808" + - name: "H2O" + - compartment: "erm" + - formula: "H2O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "h2o" - chebi: "CHEBI:15377" - kegg.compound: "C00001" - metanetx.chemical: "MNXM2" - sbo: "SBO:0000247" - - !!omap - - id: "s_2809" - - name: "trans-tetradec-2-enoyl-CoA" - - compartment: "erm" - - formula: "C35H56N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2809" + - name: "trans-tetradec-2-enoyl-CoA" + - compartment: "erm" + - formula: "C35H56N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "td2coa" - chebi: "CHEBI:61405" - kegg.compound: "C05273" - metanetx.chemical: "MNXM654" - sbo: "SBO:0000247" - - !!omap - - id: "s_2810" - - name: "trans-hexadec-2-enoyl-CoA" - - compartment: "erm" - - formula: "C37H60N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2810" + - name: "trans-hexadec-2-enoyl-CoA" + - compartment: "erm" + - formula: "C37H60N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "hdd2coa" - kegg.compound: "C05272" - metanetx.chemical: "MNXM581" - sbo: "SBO:0000247" - - !!omap - - id: "s_2811" - - name: "trans-octadec-2-enoyl-CoA" - - compartment: "erm" - - formula: "C39H64N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2811" + - name: "trans-octadec-2-enoyl-CoA" + - compartment: "erm" + - formula: "C39H64N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "od2coa" - chebi: "CHEBI:50570" - kegg.compound: "C16218" - metanetx.chemical: "MNXM954" - sbo: "SBO:0000247" - - !!omap - - id: "s_2812" - - name: "trans-icos-2-enoyl-CoA" - - compartment: "erm" - - formula: "C41H68N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2812" + - name: "trans-icos-2-enoyl-CoA" + - compartment: "erm" + - formula: "C41H68N7O17P3S" + - charge: -4 + - annotation: !!omap - metanetx.chemical: "MNXM22115" - sbo: "SBO:0000247" - - !!omap - - id: "s_2813" - - name: "trans-docos-2-enoyl-CoA" - - compartment: "erm" - - formula: "C43H72N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2813" + - name: "trans-docos-2-enoyl-CoA" + - compartment: "erm" + - formula: "C43H72N7O17P3S" + - charge: -4 + - annotation: !!omap - metanetx.chemical: "MNXM97615" - sbo: "SBO:0000247" - - !!omap - - id: "s_2814" - - name: "trans-tetracos-2-enoyl-CoA" - - compartment: "erm" - - formula: "C45H76N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2814" + - name: "trans-tetracos-2-enoyl-CoA" + - compartment: "erm" + - formula: "C45H76N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "CE2245" - chebi: "CHEBI:75068" - metanetx.chemical: "MNXM97616" - sbo: "SBO:0000247" - - !!omap - - id: "s_2815" - - name: "trans-hexacos-2-enoyl-CoA" - - compartment: "erm" - - formula: "C47H80N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2815" + - name: "trans-hexacos-2-enoyl-CoA" + - compartment: "erm" + - formula: "C47H80N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "hxc2coa" - chebi: "CHEBI:52975" - metanetx.chemical: "MNXM114303" - sbo: "SBO:0000247" - - !!omap - - id: "s_2816" - - name: "hexacosanoyl-CoA" - - compartment: "erm" - - formula: "C47H82N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2816" + - name: "hexacosanoyl-CoA" + - compartment: "erm" + - formula: "C47H82N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "hexccoa" - chebi: "CHEBI:52966" - metanetx.chemical: "MNXM1190" - sbo: "SBO:0000247" - - !!omap - - id: "s_2817" - - name: "oxygen" - - compartment: "erm" - - formula: "O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2817" + - name: "oxygen" + - compartment: "erm" + - formula: "O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "o2" - chebi: "CHEBI:15379" - kegg.compound: "C00007" - metanetx.chemical: "MNXM4" - sbo: "SBO:0000247" - - !!omap - - id: "s_2818" - - name: "NADH" - - compartment: "erm" - - formula: "C21H27N7O14P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_2818" + - name: "NADH" + - compartment: "erm" + - formula: "C21H27N7O14P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "nadh" - chebi: "CHEBI:57945" - kegg.compound: "C00004" - metanetx.chemical: "MNXM10" - sbo: "SBO:0000247" - - !!omap - - id: "s_2819" - - name: "palmitoleoyl-CoA(4-)" - - compartment: "erm" - - formula: "C37H60N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2819" + - name: "palmitoleoyl-CoA(4-)" + - compartment: "erm" + - formula: "C37H60N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "hdcoa" - chebi: "CHEBI:61540" - kegg.compound: "C21072" - metanetx.chemical: "MNXM781" - sbo: "SBO:0000247" - - !!omap - - id: "s_2820" - - name: "NAD" - - compartment: "erm" - - formula: "C21H26N7O14P2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2820" + - name: "NAD" + - compartment: "erm" + - formula: "C21H26N7O14P2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "nad" - chebi: "CHEBI:57540" - kegg.compound: "C00003" - metanetx.chemical: "MNXM8" - sbo: "SBO:0000247" - - !!omap - - id: "s_2821" - - name: "oleoyl-CoA" - - compartment: "erm" - - formula: "C39H64N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2821" + - name: "oleoyl-CoA" + - compartment: "erm" + - formula: "C39H64N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ocdce9coa" - chebi: "CHEBI:57387" - kegg.compound: "C00510" - metanetx.chemical: "MNXM686" - sbo: "SBO:0000247" - - !!omap - - id: "s_2822" - - name: "butyrate" - - compartment: "e" - - formula: "C4H7O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2822" + - name: "butyrate" + - compartment: "e" + - formula: "C4H7O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "but" - chebi: "CHEBI:17968" - kegg.compound: "C00246" - metanetx.chemical: "MNXM458" - sbo: "SBO:0000247" - - !!omap - - id: "s_2824" - - name: "hexanoate" - - compartment: "e" - - formula: "C6H11O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2824" + - name: "hexanoate" + - compartment: "e" + - formula: "C6H11O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hxa" - chebi: "CHEBI:17120" - kegg.compound: "C01585" - metanetx.chemical: "MNXM1653" - sbo: "SBO:0000247" - - !!omap - - id: "s_2826" - - name: "oleate" - - compartment: "e" - - formula: "C18H33O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2826" + - name: "oleate" + - compartment: "e" + - formula: "C18H33O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ocdcea" - chebi: "CHEBI:30823" - kegg.compound: "C00712" - metanetx.chemical: "MNXM306" - sbo: "SBO:0000247" - - !!omap - - id: "s_2828" - - name: "butyrate" - - compartment: "c" - - formula: "C4H7O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2828" + - name: "butyrate" + - compartment: "c" + - formula: "C4H7O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "but" - chebi: "CHEBI:17968" - kegg.compound: "C00246" - metanetx.chemical: "MNXM458" - sbo: "SBO:0000247" - - !!omap - - id: "s_2829" - - name: "hexanoate" - - compartment: "c" - - formula: "C6H11O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2829" + - name: "hexanoate" + - compartment: "c" + - formula: "C6H11O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hxa" - chebi: "CHEBI:17120" - kegg.compound: "C01585" - metanetx.chemical: "MNXM1653" - sbo: "SBO:0000247" - - !!omap - - id: "s_2831" - - name: "ATP" - - compartment: "erm" - - formula: "C10H12N5O13P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2831" + - name: "ATP" + - compartment: "erm" + - formula: "C10H12N5O13P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "atp" - chebi: "CHEBI:30616" - kegg.compound: "C00002" - metanetx.chemical: "MNXM3" - sbo: "SBO:0000247" - - !!omap - - id: "s_2832" - - name: "laurate" - - compartment: "erm" - - formula: "C12H23O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2832" + - name: "laurate" + - compartment: "erm" + - formula: "C12H23O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ddca" - chebi: "CHEBI:18262" - kegg.compound: "C02679" - metanetx.chemical: "MNXM402" - sbo: "SBO:0000247" - - !!omap - - id: "s_2833" - - name: "AMP" - - compartment: "erm" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_2833" + - name: "AMP" + - compartment: "erm" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "amp" - chebi: "CHEBI:456215" - kegg.compound: "C00020" - metanetx.chemical: "MNXM14" - sbo: "SBO:0000247" - - !!omap - - id: "s_2834" - - name: "diphosphate" - - compartment: "erm" - - formula: "HO7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_2834" + - name: "diphosphate" + - compartment: "erm" + - formula: "HO7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "ppi" - chebi: "CHEBI:33019" - kegg.compound: "C00013" - metanetx.chemical: "MNXM11" - sbo: "SBO:0000247" - - !!omap - - id: "s_2835" - - name: "myristate" - - compartment: "erm" - - formula: "C14H27O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2835" + - name: "myristate" + - compartment: "erm" + - formula: "C14H27O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ttdca" - chebi: "CHEBI:30807" - kegg.compound: "C06424" - metanetx.chemical: "MNXM314" - sbo: "SBO:0000247" - - !!omap - - id: "s_2836" - - name: "palmitate" - - compartment: "erm" - - formula: "C16H31O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2836" + - name: "palmitate" + - compartment: "erm" + - formula: "C16H31O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hdca" - chebi: "CHEBI:7896" - kegg.compound: "C00249" - metanetx.chemical: "MNXM108" - sbo: "SBO:0000247" - - !!omap - - id: "s_2837" - - name: "palmitoleate" - - compartment: "erm" - - formula: "C16H29O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2837" + - name: "palmitoleate" + - compartment: "erm" + - formula: "C16H29O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hdcea" - chebi: "CHEBI:32372" - kegg.compound: "C08362" - metanetx.chemical: "MNXM162245" - sbo: "SBO:0000247" - - !!omap - - id: "s_2838" - - name: "stearate" - - compartment: "erm" - - formula: "C18H35O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2838" + - name: "stearate" + - compartment: "erm" + - formula: "C18H35O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ocdca" - chebi: "CHEBI:25629" - kegg.compound: "C01530" - metanetx.chemical: "MNXM236" - sbo: "SBO:0000247" - - !!omap - - id: "s_2839" - - name: "oleate" - - compartment: "erm" - - formula: "C18H33O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2839" + - name: "oleate" + - compartment: "erm" + - formula: "C18H33O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ocdcea" - chebi: "CHEBI:30823" - kegg.compound: "C00712" - metanetx.chemical: "MNXM306" - sbo: "SBO:0000247" - - !!omap - - id: "s_2840" - - name: "ATP" - - compartment: "lp" - - formula: "C10H12N5O13P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2840" + - name: "ATP" + - compartment: "lp" + - formula: "C10H12N5O13P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "atp" - chebi: "CHEBI:30616" - kegg.compound: "C00002" - metanetx.chemical: "MNXM3" - sbo: "SBO:0000247" - - !!omap - - id: "s_2841" - - name: "laurate" - - compartment: "lp" - - formula: "C12H23O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2841" + - name: "laurate" + - compartment: "lp" + - formula: "C12H23O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ddca" - chebi: "CHEBI:18262" - kegg.compound: "C02679" - metanetx.chemical: "MNXM402" - sbo: "SBO:0000247" - - !!omap - - id: "s_2842" - - name: "AMP" - - compartment: "lp" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_2842" + - name: "AMP" + - compartment: "lp" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "amp" - chebi: "CHEBI:456215" - kegg.compound: "C00020" - metanetx.chemical: "MNXM14" - sbo: "SBO:0000247" - - !!omap - - id: "s_2843" - - name: "lauroyl-CoA" - - compartment: "lp" - - formula: "C33H54N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2843" + - name: "lauroyl-CoA" + - compartment: "lp" + - formula: "C33H54N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ddcacoa" - chebi: "CHEBI:57375" - kegg.compound: "C01832" - metanetx.chemical: "MNXM363" - sbo: "SBO:0000247" - - !!omap - - id: "s_2844" - - name: "myristate" - - compartment: "lp" - - formula: "C14H27O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2844" + - name: "myristate" + - compartment: "lp" + - formula: "C14H27O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ttdca" - chebi: "CHEBI:30807" - kegg.compound: "C06424" - metanetx.chemical: "MNXM314" - sbo: "SBO:0000247" - - !!omap - - id: "s_2845" - - name: "myristoyl-CoA" - - compartment: "lp" - - formula: "C35H58N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2845" + - name: "myristoyl-CoA" + - compartment: "lp" + - formula: "C35H58N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "tdcoa" - chebi: "CHEBI:57385" - kegg.compound: "C02593" - metanetx.chemical: "MNXM224" - sbo: "SBO:0000247" - - !!omap - - id: "s_2846" - - name: "palmitate" - - compartment: "lp" - - formula: "C16H31O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2846" + - name: "palmitate" + - compartment: "lp" + - formula: "C16H31O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hdca" - chebi: "CHEBI:7896" - kegg.compound: "C00249" - metanetx.chemical: "MNXM108" - sbo: "SBO:0000247" - - !!omap - - id: "s_2847" - - name: "palmitoyl-CoA" - - compartment: "lp" - - formula: "C37H62N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2847" + - name: "palmitoyl-CoA" + - compartment: "lp" + - formula: "C37H62N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "pmtcoa" - chebi: "CHEBI:57379" - kegg.compound: "C00154" - metanetx.chemical: "MNXM88" - sbo: "SBO:0000247" - - !!omap - - id: "s_2848" - - name: "palmitoleate" - - compartment: "lp" - - formula: "C16H29O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2848" + - name: "palmitoleate" + - compartment: "lp" + - formula: "C16H29O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hdcea" - chebi: "CHEBI:32372" - kegg.compound: "C08362" - metanetx.chemical: "MNXM162245" - sbo: "SBO:0000247" - - !!omap - - id: "s_2849" - - name: "palmitoleoyl-CoA(4-)" - - compartment: "lp" - - formula: "C37H60N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2849" + - name: "palmitoleoyl-CoA(4-)" + - compartment: "lp" + - formula: "C37H60N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "hdcoa" - chebi: "CHEBI:61540" - kegg.compound: "C21072" - metanetx.chemical: "MNXM781" - sbo: "SBO:0000247" - - !!omap - - id: "s_2850" - - name: "stearate" - - compartment: "lp" - - formula: "C18H35O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2850" + - name: "stearate" + - compartment: "lp" + - formula: "C18H35O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ocdca" - chebi: "CHEBI:25629" - kegg.compound: "C01530" - metanetx.chemical: "MNXM236" - sbo: "SBO:0000247" - - !!omap - - id: "s_2851" - - name: "stearoyl-CoA" - - compartment: "lp" - - formula: "C39H66N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2851" + - name: "stearoyl-CoA" + - compartment: "lp" + - formula: "C39H66N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "stcoa" - chebi: "CHEBI:57394" - kegg.compound: "C00412" - metanetx.chemical: "MNXM272" - sbo: "SBO:0000247" - - !!omap - - id: "s_2852" - - name: "oleate" - - compartment: "lp" - - formula: "C18H33O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2852" + - name: "oleate" + - compartment: "lp" + - formula: "C18H33O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ocdcea" - chebi: "CHEBI:30823" - kegg.compound: "C00712" - metanetx.chemical: "MNXM306" - sbo: "SBO:0000247" - - !!omap - - id: "s_2853" - - name: "oleoyl-CoA" - - compartment: "lp" - - formula: "C39H64N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2853" + - name: "oleoyl-CoA" + - compartment: "lp" + - formula: "C39H64N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ocdce9coa" - chebi: "CHEBI:57387" - kegg.compound: "C00510" - metanetx.chemical: "MNXM686" - sbo: "SBO:0000247" - - !!omap - - id: "s_2854" - - name: "palmitoleoyl-CoA(4-)" - - compartment: "p" - - formula: "C37H60N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2854" + - name: "palmitoleoyl-CoA(4-)" + - compartment: "p" + - formula: "C37H60N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "hdcoa" - chebi: "CHEBI:61540" - kegg.compound: "C21072" - metanetx.chemical: "MNXM781" - sbo: "SBO:0000247" - - !!omap - - id: "s_2855" - - name: "oleate" - - compartment: "p" - - formula: "C18H33O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2855" + - name: "oleate" + - compartment: "p" + - formula: "C18H33O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ocdcea" - chebi: "CHEBI:30823" - kegg.compound: "C00712" - metanetx.chemical: "MNXM306" - sbo: "SBO:0000247" - - !!omap - - id: "s_2856" - - name: "ATP" - - compartment: "ce" - - formula: "C10H12N5O13P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2856" + - name: "ATP" + - compartment: "ce" + - formula: "C10H12N5O13P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "atp" - chebi: "CHEBI:30616" - kegg.compound: "C00002" - metanetx.chemical: "MNXM3" - sbo: "SBO:0000247" - - !!omap - - id: "s_2857" - - name: "coenzyme A" - - compartment: "ce" - - formula: "C21H32N7O16P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2857" + - name: "coenzyme A" + - compartment: "ce" + - formula: "C21H32N7O16P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "coa" - chebi: "CHEBI:57287" - kegg.compound: "C00010" - metanetx.chemical: "MNXM12" - sbo: "SBO:0000247" - - !!omap - - id: "s_2858" - - name: "arachidate" - - compartment: "ce" - - formula: "C20H39O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2858" + - name: "arachidate" + - compartment: "ce" + - formula: "C20H39O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "arach" - chebi: "CHEBI:32360" - kegg.compound: "C06425" - metanetx.chemical: "MNXM2976" - sbo: "SBO:0000247" - - !!omap - - id: "s_2859" - - name: "AMP" - - compartment: "ce" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_2859" + - name: "AMP" + - compartment: "ce" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "amp" - chebi: "CHEBI:456215" - kegg.compound: "C00020" - metanetx.chemical: "MNXM14" - sbo: "SBO:0000247" - - !!omap - - id: "s_2860" - - name: "diphosphate" - - compartment: "ce" - - formula: "HO7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_2860" + - name: "diphosphate" + - compartment: "ce" + - formula: "HO7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "ppi" - chebi: "CHEBI:33019" - kegg.compound: "C00013" - metanetx.chemical: "MNXM11" - sbo: "SBO:0000247" - - !!omap - - id: "s_2861" - - name: "icosanoyl-CoA" - - compartment: "ce" - - formula: "C41H70N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2861" + - name: "icosanoyl-CoA" + - compartment: "ce" + - formula: "C41H70N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "arachcoa" - chebi: "CHEBI:15527" - kegg.compound: "C02041" - metanetx.chemical: "MNXM1429" - sbo: "SBO:0000247" - - !!omap - - id: "s_2862" - - name: "behenate" - - compartment: "ce" - - formula: "C22H43O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2862" + - name: "behenate" + - compartment: "ce" + - formula: "C22H43O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "docosac" - chebi: "CHEBI:23858" - kegg.compound: "C08281" - metanetx.chemical: "MNXM7102" - sbo: "SBO:0000247" - - !!omap - - id: "s_2863" - - name: "docosanoyl-CoA" - - compartment: "ce" - - formula: "C43H74N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2863" + - name: "docosanoyl-CoA" + - compartment: "ce" + - formula: "C43H74N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "docoscoa" - chebi: "CHEBI:65088" - kegg.compound: "C16528" - metanetx.chemical: "MNXM10780" - sbo: "SBO:0000247" - - !!omap - - id: "s_2864" - - name: "lignoceric acid" - - compartment: "ce" - - formula: "C24H47O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2864" + - name: "lignoceric acid" + - compartment: "ce" + - formula: "C24H47O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lgnc" - chebi: "CHEBI:31014" - kegg.compound: "C08320" - metanetx.chemical: "MNXM3297" - sbo: "SBO:0000247" - - !!omap - - id: "s_2865" - - name: "tetracosanoyl-CoA" - - compartment: "ce" - - formula: "C45H78N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2865" + - name: "tetracosanoyl-CoA" + - compartment: "ce" + - formula: "C45H78N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ttccoa" - chebi: "CHEBI:52974" - kegg.compound: "C16529" - metanetx.chemical: "MNXM1504" - sbo: "SBO:0000247" - - !!omap - - id: "s_2866" - - name: "cerotic acid" - - compartment: "ce" - - formula: "C26H51O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2866" + - name: "cerotic acid" + - compartment: "ce" + - formula: "C26H51O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hexc" - chebi: "CHEBI:31013" - metanetx.chemical: "MNXM46158" - sbo: "SBO:0000247" - - !!omap - - id: "s_2867" - - name: "hexacosanoyl-CoA" - - compartment: "ce" - - formula: "C47H82N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2867" + - name: "hexacosanoyl-CoA" + - compartment: "ce" + - formula: "C47H82N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "hexccoa" - chebi: "CHEBI:52966" - metanetx.chemical: "MNXM1190" - sbo: "SBO:0000247" - - !!omap - - id: "s_2868" - - name: "behenate" - - compartment: "erm" - - formula: "C22H43O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2868" + - name: "behenate" + - compartment: "erm" + - formula: "C22H43O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "docosac" - chebi: "CHEBI:23858" - kegg.compound: "C08281" - metanetx.chemical: "MNXM7102" - sbo: "SBO:0000247" - - !!omap - - id: "s_2869" - - name: "lignoceric acid" - - compartment: "erm" - - formula: "C24H47O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2869" + - name: "lignoceric acid" + - compartment: "erm" + - formula: "C24H47O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lgnc" - chebi: "CHEBI:31014" - kegg.compound: "C08320" - metanetx.chemical: "MNXM3297" - sbo: "SBO:0000247" - - !!omap - - id: "s_2870" - - name: "cerotic acid" - - compartment: "erm" - - formula: "C26H51O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2870" + - name: "cerotic acid" + - compartment: "erm" + - formula: "C26H51O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hexc" - chebi: "CHEBI:31013" - metanetx.chemical: "MNXM46158" - 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name: "lignoceric acid" + - compartment: "lp" + - formula: "C24H47O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lgnc" - chebi: "CHEBI:31014" - kegg.compound: "C08320" - metanetx.chemical: "MNXM3297" - sbo: "SBO:0000247" - - !!omap - - id: "s_2874" - - name: "tetracosanoyl-CoA" - - compartment: "lp" - - formula: "C45H78N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2874" + - name: "tetracosanoyl-CoA" + - compartment: "lp" + - formula: "C45H78N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ttccoa" - chebi: "CHEBI:52974" - kegg.compound: "C16529" - metanetx.chemical: "MNXM1504" - sbo: "SBO:0000247" - - !!omap - - id: "s_2875" - - name: "cerotic acid" - - compartment: "lp" - - formula: "C26H51O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_2875" + - name: "cerotic acid" + - compartment: "lp" + - formula: "C26H51O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hexc" - chebi: "CHEBI:31013" - metanetx.chemical: "MNXM46158" - sbo: "SBO:0000247" - - !!omap - - id: "s_2876" - - name: "hexacosanoyl-CoA" - - compartment: "lp" - - formula: "C47H82N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2876" + - name: "hexacosanoyl-CoA" + - compartment: "lp" + - formula: "C47H82N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "hexccoa" - chebi: "CHEBI:52966" - metanetx.chemical: "MNXM1190" - sbo: "SBO:0000247" - - !!omap - - id: "s_2877" - - name: "palmitoleoyl-CoA(4-)" - - compartment: "c" - - formula: "C37H60N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2877" + - name: "palmitoleoyl-CoA(4-)" + - compartment: "c" + - formula: "C37H60N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "hdcoa" - chebi: "CHEBI:61540" - kegg.compound: "C21072" - metanetx.chemical: "MNXM781" - sbo: "SBO:0000247" - - !!omap - - id: "s_2878" - - name: "icosanoyl-CoA" - - compartment: "c" - - formula: "C41H70N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2878" + - name: "icosanoyl-CoA" + - compartment: "c" + - formula: "C41H70N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "arachcoa" - chebi: "CHEBI:15527" - kegg.compound: "C02041" - metanetx.chemical: "MNXM1429" - sbo: "SBO:0000247" - - !!omap - - id: "s_2879" - - name: "icosanoyl-CoA" - - compartment: "p" - - formula: "C41H70N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2879" + - name: "icosanoyl-CoA" + - compartment: "p" + - formula: "C41H70N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "arachcoa" - chebi: "CHEBI:15527" - kegg.compound: "C02041" - metanetx.chemical: "MNXM1429" - sbo: "SBO:0000247" - - !!omap - - id: "s_2880" - - name: "docosanoyl-CoA" - - compartment: "c" - - formula: "C43H74N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2880" + - name: "docosanoyl-CoA" + - compartment: "c" + - formula: "C43H74N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "docoscoa" - chebi: "CHEBI:65088" - 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!!omap + - id: "s_2883" + - name: "hexanoate" + - compartment: "p" + - formula: "C6H11O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hxa" - chebi: "CHEBI:17120" - kegg.compound: "C01585" - metanetx.chemical: "MNXM1653" - sbo: "SBO:0000247" - - !!omap - - id: "s_2884" - - name: "butanoyl-CoA" - - compartment: "p" - - formula: "C25H38N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2884" + - name: "butanoyl-CoA" + - compartment: "p" + - formula: "C25H38N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "btcoa" - chebi: "CHEBI:57371" - kegg.compound: "C00136" - metanetx.chemical: "MNXM233" - sbo: "SBO:0000247" - - !!omap - - id: "s_2885" - - name: "hexanoyl-CoA" - - compartment: "p" - - formula: "C27H46N7O17P3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2885" + - name: "hexanoyl-CoA" + - compartment: "p" + - formula: "C27H46N7O17P3S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "hxcoa" - chebi: "CHEBI:27540" - 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- formula: "C29H44N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2888" + - name: "trans-oct-2-enoyl-CoA" + - compartment: "p" + - formula: "C29H44N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "oc2coa" - chebi: "CHEBI:27537" - kegg.compound: "C05276" - metanetx.chemical: "MNXM784" - sbo: "SBO:0000247" - - !!omap - - id: "s_2889" - - name: "trans-icos-2-enoyl-CoA" - - compartment: "p" - - formula: "C41H68N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2889" + - name: "trans-icos-2-enoyl-CoA" + - compartment: "p" + - formula: "C41H68N7O17P3S" + - charge: -4 + - annotation: !!omap - metanetx.chemical: "MNXM22115" - sbo: "SBO:0000247" - - !!omap - - id: "s_2890" - - name: "trans-docos-2-enoyl-CoA" - - compartment: "p" - - formula: "C43H72N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_2890" + - name: "trans-docos-2-enoyl-CoA" + - compartment: "p" + - formula: "C43H72N7O17P3S" + - charge: -4 + - annotation: !!omap - 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- annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_2894" - - name: "trans-2,cis-7-tetradecadienoyl-CoA" - - compartment: "p" - - formula: "C35H58N7O17P3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_2893" + - name: "cis-tetradec-7-enoyl-CoA" + - compartment: "p" + - formula: "C35H60N7O17P3S" + - charge: 0 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_2894" + - name: "trans-2,cis-7-tetradecadienoyl-CoA" + - compartment: "p" + - formula: "C35H58N7O17P3S" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:88067" - sbo: "SBO:0000247" - - !!omap - - id: "s_2895" - - name: "cis-dodec-5-enoyl-CoA" - - compartment: "p" - - formula: "C33H56N7O17P3S" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_2896" - - name: "trans-2,cis-5-dodecadienoyl-CoA" - - compartment: "p" - - formula: "C33H54N7O17P3S" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_2897" - - name: "trans-2,cis-9-octadecadienoyl-CoA" - 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compartment: "lp" + - formula: "C40H78NO8P" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:134592" - sbo: "SBO:0000247" - - !!omap - - id: "s_3694" - - name: "1-acylglycerophosphocholine (16:0)" - - compartment: "lp" - - formula: "C24H50NO7P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3694" + - name: "1-acylglycerophosphocholine (16:0)" + - compartment: "lp" + - formula: "C24H50NO7P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "1agpc160" - chebi: "CHEBI:72998" - kegg.compound: "C04102" - metanetx.chemical: "MNXM32510" - sbo: "SBO:0000247" - - !!omap - - id: "s_3695" - - name: "phosphatidylcholine (1-16:1, 2-16:1)" - - compartment: "lp" - - formula: "C40H76NO8P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3695" + - name: "phosphatidylcholine (1-16:1, 2-16:1)" + - compartment: "lp" + - formula: "C40H76NO8P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pc161" - chebi: "CHEBI:83717" - metanetx.chemical: "MNXM69377" - sbo: "SBO:0000247" - - !!omap - - id: "s_3696" - - name: "1-acylglycerophosphocholine (16:1)" - - compartment: "lp" - - formula: "C24H48NO7P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3696" + - name: "1-acylglycerophosphocholine (16:1)" + - compartment: "lp" + - formula: "C24H48NO7P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "1agpc161" - chebi: "CHEBI:73851" - metanetx.chemical: "MNXM32519" - sbo: "SBO:0000247" - - !!omap - - id: "s_3697" - - name: "phosphatidylcholine (1-18:0, 2-16:1)" - - compartment: "lp" - - formula: "C42H82NO8P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3697" + - name: "phosphatidylcholine (1-18:0, 2-16:1)" + - compartment: "lp" + - formula: "C42H82NO8P" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:86097" - metanetx.chemical: "MNXM69528" - sbo: "SBO:0000247" - - !!omap - - id: "s_3698" - - name: "1-acylglycerophosphocholine (18:0)" - - compartment: "lp" - - formula: "C26H54NO7P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3698" + - name: "1-acylglycerophosphocholine (18:0)" + - compartment: "lp" + - formula: "C26H54NO7P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "1agpc180" - chebi: "CHEBI:73858" - metanetx.chemical: "MNXM32545" - sbo: "SBO:0000247" - - !!omap - - id: "s_3699" - - name: "phosphatidylcholine (1-18:1, 2-16:1)" - - compartment: "lp" - - formula: "C42H80NO8P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3699" + - name: "phosphatidylcholine (1-18:1, 2-16:1)" + - compartment: "lp" + - formula: "C42H80NO8P" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:86100" - metanetx.chemical: "MNXM69658" - sbo: "SBO:0000247" - - !!omap - - id: "s_3700" - - name: "1-acylglycerophosphocholine (18:1)" - - compartment: "lp" - - formula: "C26H52NO7P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3700" + - name: "1-acylglycerophosphocholine (18:1)" + - compartment: "lp" + - formula: "C26H52NO7P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "1agpc181" - chebi: "CHEBI:28610" - kegg.compound: "C03916" - metanetx.chemical: "MNXM13872" - sbo: "SBO:0000247" - - !!omap - - id: "s_3701" - - name: "phosphatidylcholine (1-16:0, 2-18:1)" - - compartment: "lp" - - formula: "C42H82NO8P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3701" + - name: "phosphatidylcholine (1-16:0, 2-18:1)" + - compartment: "lp" + - formula: "C42H82NO8P" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:134594" - sbo: "SBO:0000247" - - !!omap - - id: "s_3702" - - name: "phosphatidylcholine (1-16:1, 2-18:1)" - - compartment: "lp" - - formula: "C42H80NO8P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3702" + - name: "phosphatidylcholine (1-16:1, 2-18:1)" + - compartment: "lp" + - formula: "C42H80NO8P" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:84811" - metanetx.chemical: "MNXM69383" - sbo: "SBO:0000247" - - !!omap - - id: "s_3703" - - name: "phosphatidylcholine (1-18:0, 2-18:1)" - - compartment: "lp" - - formula: "C44H86NO8P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3703" + - name: "phosphatidylcholine (1-18:0, 2-18:1)" + - compartment: "lp" + - formula: "C44H86NO8P" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:75034" - metanetx.chemical: "MNXM32526" - sbo: "SBO:0000247" - - !!omap - - id: "s_3704" - - name: "phosphatidylcholine (1-18:1, 2-18:1)" - - compartment: "lp" - - formula: "C44H84NO8P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3704" + - name: "phosphatidylcholine (1-18:1, 2-18:1)" + - compartment: "lp" + - formula: "C44H84NO8P" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:74669" - metanetx.chemical: "MNXM8549" - sbo: "SBO:0000247" - - !!omap - - id: "s_3705" - - name: "phosphatidylethanolamine (1-16:0, 2-16:1)" - - compartment: "lp" - - formula: "C37H72NO8P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3705" + - name: "phosphatidylethanolamine (1-16:0, 2-16:1)" + - compartment: "lp" + - formula: "C37H72NO8P" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:136147" - sbo: "SBO:0000247" - - !!omap - - id: "s_3706" - - name: "phosphatidylethanolamine (1-16:1, 2-16:1)" - - compartment: "lp" - - formula: "C37H70NO8P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3706" + - name: "phosphatidylethanolamine (1-16:1, 2-16:1)" + - compartment: "lp" + - formula: "C37H70NO8P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pe161" - chebi: "CHEBI:138792" - sbo: "SBO:0000247" - - !!omap - - id: "s_3707" - - name: "phosphatidylethanolamine (1-18:0, 2-16:1)" - - compartment: "lp" - - formula: "C39H76NO8P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3707" + - name: "phosphatidylethanolamine (1-18:0, 2-16:1)" + - compartment: "lp" + - formula: "C39H76NO8P" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:136155" - sbo: "SBO:0000247" - - !!omap - - id: "s_3708" - - name: "phosphatidylethanolamine (1-18:1, 2-16:1)" - - compartment: "lp" - - formula: "C39H74NO8P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3708" + - name: "phosphatidylethanolamine (1-18:1, 2-16:1)" + - compartment: "lp" + - formula: "C39H74NO8P" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:82837" - metanetx.chemical: "MNXM71684" - sbo: "SBO:0000247" - - !!omap - - id: "s_3709" - - name: "ergosterol ester backbone" - - compartment: "erm" - - formula: "C28H42" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3709" + - name: "ergosterol ester backbone" + - compartment: "erm" + - formula: "C28H42" + - charge: 0 + - annotation: !!omap - metanetx.chemical: "MNXM5739" - sbo: "SBO:0000649" - - !!omap - - id: "s_3710" - - name: "phosphatidyl-L-serine backbone" - - compartment: "erm" - - formula: "C6H10NO6P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3710" + - name: "phosphatidyl-L-serine backbone" + - compartment: "erm" + - formula: "C6H10NO6P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ps_cho" - kegg.compound: "C02737" - metanetx.chemical: "MNXM221" - sbo: "SBO:0000649" - - !!omap - - id: "s_3711" - - name: "phosphatidylcholine backbone" - - compartment: "erm" - - formula: "C8H16NO3P" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_3711" + - name: "phosphatidylcholine backbone" + - compartment: "erm" + - formula: "C8H16NO3P" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "pchol_cho" - kegg.compound: "C00157" - metanetx.chemical: "MNXM96952" - sbo: "SBO:0000649" - - !!omap - - id: "s_3712" - - name: "phosphatidylethanolamine backbone" - - compartment: "erm" - - formula: "C5H10NO4P" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3712" + - name: "phosphatidylethanolamine backbone" + - compartment: "erm" + - formula: "C5H10NO4P" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pe_hs" - kegg.compound: "C00350" - metanetx.chemical: "MNXM115" - sbo: "SBO:0000649" - - !!omap - - id: "s_3713" - - name: "triglyceride backbone" - - compartment: "erm" - - formula: "C3H2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3713" + - name: "triglyceride backbone" + - compartment: "erm" + - formula: "C3H2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "tag_cho" - kegg.compound: "C00422" - metanetx.chemical: "MNXM248" - sbo: "SBO:0000649" - - !!omap - - id: "s_3714" - - name: "heme a" - - compartment: "c" - - formula: "C49H55FeN4O6" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_3714" + - name: "heme a" + - compartment: "c" + - formula: "C49H55FeN4O6" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "hemeA" - chebi: "CHEBI:24479" - kegg.compound: "C15670" - metanetx.chemical: "MNXM53309" - sbo: "SBO:0000247" - - !!omap - - id: "s_3715" - - name: "raffinose" - - compartment: "e" - - formula: "C18H32O16" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3715" + - name: "raffinose" + - compartment: "e" + - formula: "C18H32O16" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "raffin" - chebi: "CHEBI:16634" - kegg.compound: "C00492" - metanetx.chemical: "MNXM621" - sbo: "SBO:0000247" - - !!omap - - id: "s_3716" - - name: "melibiose" - - compartment: "e" - - formula: "C12H22O11" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3716" + - name: "melibiose" + - compartment: "e" + - formula: "C12H22O11" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "melib" - chebi: "CHEBI:28053" - kegg.compound: "C05402" - metanetx.chemical: "MNXM1434" - sbo: "SBO:0000247" - - !!omap - - id: "s_3717" - - name: "protein" - - compartment: "c" - - formula: "" - - annotation: !!omap + - !!omap + - id: "s_3717" + - name: "protein" + - compartment: "c" + - formula: "" + - annotation: !!omap - bigg.metabolite: "protein" - kegg.compound: "C00492" - metanetx.chemical: "MNXM621" - sbo: "SBO:0000649" - - !!omap - - id: "s_3718" - - name: "carbohydrate" - - compartment: "c" - - formula: "" - - annotation: !!omap + - !!omap + - id: "s_3718" + - name: "carbohydrate" + - compartment: "c" + - formula: "" + - annotation: !!omap - kegg.compound: "C05402" - metanetx.chemical: "MNXM1434" - sbo: "SBO:0000649" - - !!omap - - id: "s_3719" - - name: "RNA" - - compartment: "c" - - formula: "" - - annotation: !!omap + - !!omap + - id: "s_3719" + - name: "RNA" + - compartment: "c" + - formula: "" + - annotation: !!omap - bigg.metabolite: "rna" - sbo: "SBO:0000649" - - !!omap - - id: "s_3720" - - name: "DNA" - - compartment: "c" - - formula: "" - - annotation: !!omap + - !!omap + - id: "s_3720" + - name: "DNA" + - compartment: "c" + - formula: "" + - annotation: !!omap - bigg.metabolite: "dna" - sbo: "SBO:0000649" - - !!omap - - id: "s_3721" - - name: "ceramide backbone" - - compartment: "g" - - formula: "HNO2" - - annotation: !!omap + - !!omap + - id: "s_3721" + - name: "ceramide backbone" + - compartment: "g" + - formula: "HNO2" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3722" - - name: "ceramide backbone" - - compartment: "c" - - formula: "HNO2" - - annotation: !!omap + - !!omap + - id: "s_3722" + - name: "ceramide backbone" + - compartment: "c" + - formula: "HNO2" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3723" - - name: "inositol phosphomannosylinositol phosphoceramide backbone" - - compartment: "c" - - formula: "C18H33NO23P2" - - annotation: !!omap + - !!omap + - id: "s_3723" + - name: "inositol phosphomannosylinositol phosphoceramide backbone" + - compartment: "c" + - formula: "C18H33NO23P2" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3724" - - name: "inositol-P-ceramide backbone" - - compartment: "c" - - formula: "C6H12NO10P" - - annotation: !!omap + - !!omap + - id: "s_3724" + - name: "inositol-P-ceramide backbone" + - compartment: "c" + - formula: "C6H12NO10P" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3725" - - name: "mannosylinositol phosphorylceramide backbone" - - compartment: "c" - - formula: "C12H22NO15P" - - annotation: !!omap + - !!omap + - id: "s_3725" + - name: "mannosylinositol phosphorylceramide backbone" + - compartment: "c" + - formula: "C12H22NO15P" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3726" - - name: "long-chain base backbone" - - compartment: "er" - - formula: "H4N" - - annotation: !!omap + - !!omap + - id: "s_3726" + - name: "long-chain base backbone" + - compartment: "er" + - formula: "H4N" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3727" - - name: "long-chain base backbone" - - compartment: "c" - - formula: "H4N" - - annotation: !!omap + - !!omap + - id: "s_3727" + - name: "long-chain base backbone" + - compartment: "c" + - formula: "H4N" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3728" - - name: "long-chain base phosphate backbone" - - compartment: "er" - - formula: "H3NO3P" - - annotation: !!omap + - !!omap + - id: "s_3728" + - name: "long-chain base phosphate backbone" + - compartment: "er" + - formula: "H3NO3P" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3729" - - name: "long-chain base phosphate backbone" - - compartment: "c" - - formula: "H3NO3P" - - annotation: !!omap + - !!omap + - id: "s_3729" + - name: "long-chain base phosphate backbone" + - compartment: "c" + - formula: "H3NO3P" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3730" - - name: "phosphatidate backbone" - - compartment: "erm" - - formula: "C3H5O4P" - - annotation: !!omap + - !!omap + - id: "s_3730" + - name: "phosphatidate backbone" + - compartment: "erm" + - formula: "C3H5O4P" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3731" - - name: "phosphatidate backbone" - - compartment: "c" - - formula: "C3H5O4P" - - annotation: !!omap + - !!omap + - id: "s_3731" + - name: "phosphatidate backbone" + - compartment: "c" + - formula: "C3H5O4P" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3732" - - name: "diglyceride backbone" - - compartment: "erm" - - formula: "C3H4O" - - annotation: !!omap + - !!omap + - id: "s_3732" + - name: "diglyceride backbone" + - compartment: "erm" + - formula: "C3H4O" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3733" - - name: "diglyceride backbone" - - compartment: "c" - - formula: "C3H4O" - - annotation: !!omap + - !!omap + - id: "s_3733" + - name: "diglyceride backbone" + - compartment: "c" + - formula: "C3H4O" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3734" - - name: "sn-2-acyl-1-lysophosphatidylinositol backbone" - - compartment: "erm" - - formula: "C9H11O10P" - - annotation: !!omap + - !!omap + - id: "s_3734" + - name: "sn-2-acyl-1-lysophosphatidylinositol backbone" + - compartment: "erm" + - formula: "C9H11O10P" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3735" - - name: "sn-2-acyl-1-lysophosphatidylinositol backbone" - - compartment: "c" - - formula: "C9H11O10P" - - annotation: !!omap + - !!omap + - id: "s_3735" + - name: "sn-2-acyl-1-lysophosphatidylinositol backbone" + - compartment: "c" + - formula: "C9H11O10P" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3736" - - name: "phosphatidylglycerol backbone" - - compartment: "mm" - - formula: "C6H11O6P" - - annotation: !!omap + - !!omap + - id: "s_3736" + - name: "phosphatidylglycerol backbone" + - compartment: "mm" + - formula: "C6H11O6P" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3737" - - name: "phosphatidylglycerol backbone" - - compartment: "c" - - formula: "C6H11O6P" - - annotation: !!omap + - !!omap + - id: "s_3737" + - name: "phosphatidylglycerol backbone" + - compartment: "c" + - formula: "C6H11O6P" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3738" - - name: "cardiolipin backbone" - - compartment: "mm" - - formula: "C9H14O9P2" - - annotation: !!omap + - !!omap + - id: "s_3738" + - name: "cardiolipin backbone" + - compartment: "mm" + - formula: "C9H14O9P2" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3739" - - name: "cardiolipin backbone" - - compartment: "c" - - formula: "C9H14O9P2" - - annotation: !!omap + - !!omap + - id: "s_3739" + - name: "cardiolipin backbone" + - compartment: "c" + - formula: "C9H14O9P2" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3740" - - name: "C16:0 chain" - - compartment: "c" - - formula: "C16H32O2" - - annotation: !!omap + - !!omap + - id: "s_3740" + - name: "C16:0 chain" + - compartment: "c" + - formula: "C16H32O2" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3741" - - name: "C16:1 chain" - - compartment: "c" - - formula: "C16H30O2" - - annotation: !!omap + - !!omap + - id: "s_3741" + - name: "C16:1 chain" + - compartment: "c" + - formula: "C16H30O2" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3742" - - name: "C18:0 chain" - - compartment: "c" - - formula: "C18H36O2" - - annotation: !!omap + - !!omap + - id: "s_3742" + - name: "C18:0 chain" + - compartment: "c" + - formula: "C18H36O2" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3743" - - name: "C18:1 chain" - - compartment: "c" - - formula: "C18H34O2" - - annotation: !!omap + - !!omap + - id: "s_3743" + - name: "C18:1 chain" + - compartment: "c" + - formula: "C18H34O2" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3744" - - name: "C24:0 chain" - - compartment: "c" - - formula: "C24H48O2" - - annotation: !!omap + - !!omap + - id: "s_3744" + - name: "C24:0 chain" + - compartment: "c" + - formula: "C24H48O2" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3745" - - name: "C26:0 chain" - - compartment: "c" - - formula: "C26H52O2" - - annotation: !!omap + - !!omap + - id: "s_3745" + - name: "C26:0 chain" + - compartment: "c" + - formula: "C26H52O2" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3746" - - name: "lipid backbone" - - compartment: "c" - - formula: "" - - annotation: !!omap + - !!omap + - id: "s_3746" + - name: "lipid backbone" + - compartment: "c" + - formula: "" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3747" - - name: "lipid chain" - - compartment: "c" - - formula: "" - - annotation: !!omap + - !!omap + - id: "s_3747" + - name: "lipid chain" + - compartment: "c" + - formula: "" + - annotation: !!omap - sbo: "SBO:0000649" - - !!omap - - id: "s_3748" - - name: "Cytochrome c" - - compartment: "m" - - formula: "C40H40FeN6O6S2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3748" + - name: "Cytochrome c" + - compartment: "m" + - formula: "C40H40FeN6O6S2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "cytc" - chebi: "CHEBI:83739" - kegg.compound: "C00524" - sbo: "SBO:0000247" - - !!omap - - id: "s_3749" - - name: "Apocytochrome c" - - compartment: "m" - - formula: "C6H10N2O2S2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3749" + - name: "Apocytochrome c" + - compartment: "m" + - formula: "C6H10N2O2S2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "apocytc" - chebi: "CHEBI:15697" - kegg.compound: "C02248" - metanetx.chemical: "MNXM2100" - sbo: "SBO:0000247" - - !!omap - - id: "s_3750" - - name: "diacetyl" - - compartment: "c" - - formula: "C4H6O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3750" + - name: "diacetyl" + - compartment: "c" + - formula: "C4H6O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "diact" - chebi: "CHEBI:16583" - kegg.compound: "C00741" - metanetx.chemical: "MNXM1467" - sbo: "SBO:0000247" - - !!omap - - id: "s_3751" - - name: "(R)-acetoin" - - compartment: "n" - - formula: "C4H8O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3751" + - name: "(R)-acetoin" + - compartment: "n" + - formula: "C4H8O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "actn__R" - chebi: "CHEBI:15686" - kegg.compound: "C00810" - metanetx.chemical: "MNXM664" - sbo: "SBO:0000247" - - !!omap - - id: "s_3752" - - name: "diacetyl" - - compartment: "n" - - formula: "C4H6O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3752" + - name: "diacetyl" + - compartment: "n" + - formula: "C4H6O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "diact" - chebi: "CHEBI:16583" - kegg.compound: "C00741" - metanetx.chemical: "MNXM1467" - sbo: "SBO:0000247" - - !!omap - - id: "s_3753" - - name: "NADH" - - compartment: "n" - - formula: "C21H27N7O14P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3753" + - name: "NADH" + - compartment: "n" + - formula: "C21H27N7O14P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "nadh" - chebi: "CHEBI:57945" - kegg.compound: "C00004" - metanetx.chemical: "MNXM10" - sbo: "SBO:0000247" - - !!omap - - id: "s_3754" - - name: "L-glutamyl-tRNA(Gln)" - - compartment: "m" - - formula: "C5H8NO3R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3754" + - name: "L-glutamyl-tRNA(Gln)" + - compartment: "m" + - formula: "C5H8NO3R" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "glutrna_gln" - chebi: "CHEBI:29165" - kegg.compound: "C06112" - metanetx.chemical: "MNXM91213" - sbo: "SBO:0000247" - - !!omap - - id: "s_3755" - - name: "L-glutamine" - - compartment: "m" - - formula: "C5H10N2O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3755" + - name: "L-glutamine" + - compartment: "m" + - formula: "C5H10N2O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "gln__L" - chebi: "CHEBI:18050" - kegg.compound: "C00064" - metanetx.chemical: "MNXM37" - sbo: "SBO:0000247" - - !!omap - - id: "s_3756" - - name: "Gln-tRNA(Gln)" - - compartment: "m" - - formula: "C5H10N2O2R" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_3756" + - name: "Gln-tRNA(Gln)" + - compartment: "m" + - formula: "C5H10N2O2R" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "glntrna" - chebi: "CHEBI:29166" - kegg.compound: "C02282" - metanetx.chemical: "MNXM89810" - sbo: "SBO:0000247" - - !!omap - - id: "s_3757" - - name: "Met-Ala" - - compartment: "v" - - formula: "C8H16N2O3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3757" + - name: "Met-Ala" + - compartment: "v" + - formula: "C8H16N2O3S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "met_L_ala__L" - chebi: "CHEBI:73610" - metanetx.chemical: "MNXM61647" - sbo: "SBO:0000247" - - !!omap - - id: "s_3758" - - name: "L-methionine" - - compartment: "v" - - formula: "C5H11NO2S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3758" + - name: "L-methionine" + - compartment: "v" + - formula: "C5H11NO2S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "met__L" - chebi: "CHEBI:16643" - kegg.compound: "C00073" - metanetx.chemical: "MNXM61" - sbo: "SBO:0000247" - - !!omap - - id: "s_3759" - - name: "L-alanine" - - compartment: "v" - - formula: "C3H7NO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3759" + - name: "L-alanine" + - compartment: "v" + - formula: "C3H7NO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ala__L" - chebi: "CHEBI:16977" - kegg.compound: "C00041" - metanetx.chemical: "MNXM32" - sbo: "SBO:0000247" - - !!omap - - id: "s_3760" - - name: "ADP-D-ribose 1''-phosphate" - - compartment: "c" - - formula: "C15H20N5O17P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_3760" + - name: "ADP-D-ribose 1''-phosphate" + - compartment: "c" + - formula: "C15H20N5O17P3" + - charge: -4 + - annotation: !!omap - chebi: "CHEBI:58753" - metanetx.chemical: "MNXM5039" - sbo: "SBO:0000247" - - !!omap - - id: "s_3761" - - name: "ADP-ribose" - - compartment: "c" - - formula: "C15H21N5O14P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3761" + - name: "ADP-ribose" + - compartment: "c" + - formula: "C15H21N5O14P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "adprib" - chebi: "CHEBI:57967" - kegg.compound: "C00301" - metanetx.chemical: "MNXM48596" - sbo: "SBO:0000247" - - !!omap - - id: "s_3762" - - name: "quinone" - - compartment: "c" - - formula: "C6H4O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3762" + - name: "quinone" + - compartment: "c" + - formula: "C6H4O2" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:16509" - kegg.compound: "C00472" - metanetx.chemical: "MNXM769" - sbo: "SBO:0000247" - - !!omap - - id: "s_3763" - - name: "1,4-benzosemiquinone" - - compartment: "c" - - formula: "C6H5O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3763" + - name: "1,4-benzosemiquinone" + - compartment: "c" + - formula: "C6H5O2" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:17977" - kegg.compound: "C02389" - metanetx.chemical: "MNXM7107" - sbo: "SBO:0000247" - - !!omap - - id: "s_3764" - - name: "UDP-N-acetyl-alpha-D-glucosamine" - - compartment: "er" - - formula: "C17H25N3O17P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3764" + - name: "UDP-N-acetyl-alpha-D-glucosamine" + - compartment: "er" + - formula: "C17H25N3O17P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "uacgam" - chebi: "CHEBI:57705" - kegg.compound: "C00043" - metanetx.chemical: "MNXM47" - sbo: "SBO:0000247" - - !!omap - - id: "s_3765" - - name: "N-Acetyl-D-glucosaminyldiphosphodolichol" - - compartment: "er" - - formula: "C28H51NO12P2R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3765" + - name: "N-Acetyl-D-glucosaminyldiphosphodolichol" + - compartment: "er" + - formula: "C28H51NO12P2R" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "naglc2p" - chebi: "CHEBI:18278" - kegg.compound: "C04500" - metanetx.chemical: "MNXM818" - sbo: "SBO:0000247" - - !!omap - - id: "s_3766" - - name: "UDP" - - compartment: "er" - - formula: "C9H11N2O12P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_3766" + - name: "UDP" + - compartment: "er" + - formula: "C9H11N2O12P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "udp" - chebi: "CHEBI:58223" - kegg.compound: "C00015" - metanetx.chemical: "MNXM17" - sbo: "SBO:0000247" - - !!omap - - id: "s_3767" - - name: "N,N'-Chitobiosyldiphosphodolichol" - - compartment: "er" - - formula: "C36H64N2O17P2R" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_3768" - - name: "D-ribofuranose 5-phosphate" - - compartment: "c" - - formula: "C5H9O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3767" + - name: "N,N'-Chitobiosyldiphosphodolichol" + - compartment: "er" + - formula: "C36H64N2O17P2R" + - charge: 0 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_3768" + - name: "D-ribofuranose 5-phosphate" + - compartment: "c" + - formula: "C5H9O8P" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:78346" - kegg.compound: "C00117" - metanetx.chemical: "MNXM722712" - sbo: "SBO:0000247" - - !!omap - - id: "s_3769" - - name: "Oxalate" - - compartment: "p" - - formula: "C2O4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3769" + - name: "Oxalate" + - compartment: "p" + - formula: "C2O4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "oxa" - chebi: "CHEBI:30623" - kegg.compound: "C00209" - metanetx.chemical: "MNXM291" - sbo: "SBO:0000247" - - !!omap - - id: "s_3770" - - name: "Oxalyl-CoA" - - compartment: "p" - - formula: "C23H31N7O19P3S" - - charge: -5 - - annotation: !!omap + - !!omap + - id: "s_3770" + - name: "Oxalyl-CoA" + - compartment: "p" + - formula: "C23H31N7O19P3S" + - charge: -5 + - annotation: !!omap - bigg.metabolite: "oxalcoa" - chebi: "CHEBI:57388" - kegg.compound: "C00313" - metanetx.chemical: "MNXM618" - sbo: "SBO:0000247" - - !!omap - - id: "s_3771" - - name: "G00171" - - compartment: "er" - - formula: "C86H142N4O67R" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_3772" - - name: "D-glucose" - - compartment: "er" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3771" + - name: "G00171" + - compartment: "er" + - formula: "C86H142N4O67R" + - charge: 0 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_3772" + - name: "D-glucose" + - compartment: "er" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "glc__D" - chebi: "CHEBI:4167" - kegg.compound: "C00031" - metanetx.chemical: "MNXM41" - sbo: "SBO:0000247" - - !!omap - - id: "s_3773" - - name: "G00010" - - compartment: "er" - - formula: "C80H132N4O62R" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_3774" - - name: "G00011" - - compartment: "er" - - formula: "C74H122N4O57R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3773" + - name: "G00010" + - compartment: "er" + - formula: "C80H132N4O62R" + - charge: 0 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_3774" + - name: "G00011" + - compartment: "er" + - formula: "C74H122N4O57R" + - charge: 0 + - annotation: !!omap - metanetx.chemical: "MNXM6479" - sbo: "SBO:0000247" - - !!omap - - id: "s_3775" - - name: "sodium" - - compartment: "v" - - formula: "Na" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_3775" + - name: "sodium" + - compartment: "v" + - formula: "Na" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "na1" - chebi: "CHEBI:29101" - kegg.compound: "C01330" - metanetx.chemical: "MNXM27" - sbo: "SBO:0000247" - - !!omap - - id: "s_3776" - - name: "potassium" - - compartment: "v" - - formula: "K" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_3776" + - name: "potassium" + - compartment: "v" + - formula: "K" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "k" - chebi: "CHEBI:29103" - kegg.compound: "C00238" - metanetx.chemical: "MNXM95" - sbo: "SBO:0000247" - - !!omap - - id: "s_3777" - - name: "chloride" - - compartment: "v" - - formula: "Cl" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3777" + - name: "chloride" + - compartment: "v" + - formula: "Cl" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "cl" - chebi: "CHEBI:17996" - kegg.compound: "C00698" - metanetx.chemical: "MNXM43" - sbo: "SBO:0000247" - - !!omap - - id: "s_3778" - - name: "chloride" - - compartment: "c" - - formula: "Cl" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3778" + - name: "chloride" + - compartment: "c" + - formula: "Cl" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "cl" - chebi: "CHEBI:17996" - kegg.compound: "C00698" - metanetx.chemical: "MNXM43" - sbo: "SBO:0000247" - - !!omap - - id: "s_3779" - - name: "D-fructose" - - compartment: "v" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3779" + - name: "D-fructose" + - compartment: "v" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "fru" - chebi: "CHEBI:15824" - kegg.compound: "C00095" - metanetx.chemical: "MNXM175" - sbo: "SBO:0000247" - - !!omap - - id: "s_3780" - - name: "D-galactose" - - compartment: "v" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3780" + - name: "D-galactose" + - compartment: "v" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "gal" - chebi: "CHEBI:4139" - kegg.compound: "C00124" - metanetx.chemical: "MNXM390" - sbo: "SBO:0000247" - - !!omap - - id: "s_3781" - - name: "UMP" - - compartment: "er" - - formula: "C9H11N2O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3781" + - name: "UMP" + - compartment: "er" + - formula: "C9H11N2O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "ump" - chebi: "CHEBI:57865" - kegg.compound: "C00105" - metanetx.chemical: "MNXM80" - sbo: "SBO:0000247" - - !!omap - - id: "s_3782" - - name: "cadmium(2+)" - - compartment: "c" - - formula: "Cd" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_3782" + - name: "cadmium(2+)" + - compartment: "c" + - formula: "Cd" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "cd2" - chebi: "CHEBI:48775" - kegg.compound: "C01413" - metanetx.chemical: "MNXM4505" - sbo: "SBO:0000247" - - !!omap - - id: "s_3783" - - name: "cadmium(2+)" - - compartment: "e" - - formula: "Cd" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_3783" + - name: "cadmium(2+)" + - compartment: "e" + - formula: "Cd" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "cd2" - chebi: "CHEBI:48775" - kegg.compound: "C01413" - metanetx.chemical: "MNXM4505" - sbo: "SBO:0000247" - - !!omap - - id: "s_3784" - - name: "(sulfur carrier)-H" - - compartment: "m" - - formula: "R" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_3785" - - name: "L-cysteine" - - compartment: "m" - - formula: "C3H7NO2S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3784" + - name: "(sulfur carrier)-H" + - compartment: "m" + - formula: "R" + - charge: 0 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_3785" + - name: "L-cysteine" + - compartment: "m" + - formula: "C3H7NO2S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "cys__L" - chebi: "CHEBI:17561" - kegg.compound: "C00097" - metanetx.chemical: "MNXM55" - sbo: "SBO:0000247" - - !!omap - - id: "s_3786" - - name: "(sulfur carrier)-SH" - - compartment: "m" - - formula: "SR" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_3787" - - name: "cholesterol" - - compartment: "er" - - formula: "C27H46O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3786" + - name: "(sulfur carrier)-SH" + - compartment: "m" + - formula: "SR" + - charge: 0 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_3787" + - name: "cholesterol" + - compartment: "er" + - formula: "C27H46O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "chsterol" - chebi: "CHEBI:16113" - kegg.compound: "C00187" - metanetx.chemical: "MNXM103" - sbo: "SBO:0000247" - - !!omap - - id: "s_3788" - - name: "cholesterol" - - compartment: "erm" - - formula: "C27H46O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3788" + - name: "cholesterol" + - compartment: "erm" + - formula: "C27H46O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "chsterol" - chebi: "CHEBI:16113" - kegg.compound: "C00187" - metanetx.chemical: "MNXM103" - sbo: "SBO:0000247" - - !!omap - - id: "s_3789" - - name: "3-chlorobenzyl alcohol" - - compartment: "c" - - formula: "C7H7ClO" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_3790" - - name: "3-chlorobenzaldehyde" - - compartment: "c" - - formula: "C7H5ClO" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - 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- charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3800" + - name: "benzaldehyde" + - compartment: "c" + - formula: "C7H6O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "bzal" - chebi: "CHEBI:17169" - kegg.compound: "C00261" - metanetx.chemical: "MNXM371" - sbo: "SBO:0000247" - - !!omap - - id: "s_3801" - - name: "Mn(2+)" - - compartment: "c" - - formula: "Mn" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_3801" + - name: "Mn(2+)" + - compartment: "c" + - formula: "Mn" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "mn2" - chebi: "CHEBI:29035" - kegg.compound: "C19610" - metanetx.chemical: "MNXM2255" - sbo: "SBO:0000247" - - !!omap - - id: "s_3802" - - name: "Mn(2+)" - - compartment: "er" - - formula: "Mn" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_3802" + - name: "Mn(2+)" + - compartment: "er" + - formula: "Mn" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "mn2" - chebi: "CHEBI:29035" - kegg.compound: "C19610" - metanetx.chemical: "MNXM2255" - sbo: "SBO:0000247" - - !!omap - - id: "s_3805" - - name: "Mannitol" - - compartment: "c" - - formula: "C6H14O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3805" + - name: "Mannitol" + - compartment: "c" + - formula: "C6H14O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "mnl" - chebi: "CHEBI:16899" - kegg.compound: "C00392" - metanetx.chemical: "MNXM615" - sbo: "SBO:0000247" - - !!omap - - id: "s_3806" - - name: "4-hydroxy-4-methyl-2-oxoglutarate" - - compartment: "c" - - formula: "C6H6O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3806" + - name: "4-hydroxy-4-methyl-2-oxoglutarate" + - compartment: "c" + - formula: "C6H6O6" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:58276" - kegg.compound: "C06033" - metanetx.chemical: "MNXM2196" - sbo: "SBO:0000247" - - !!omap - - id: "s_3807" - - name: "L-methionine (S)-S-oxide" - - compartment: "c" - - formula: "C5H11NO3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3807" + - name: "L-methionine (S)-S-oxide" + - compartment: "c" + - formula: "C5H11NO3S" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:49031" - kegg.compound: "C15999" - metanetx.chemical: "MNXM722780" - sbo: "SBO:0000247" - - !!omap - - id: "s_3808" - - name: "tRNA(Pro)" - - compartment: "m" - - formula: "RH" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3808" + - name: "tRNA(Pro)" + - compartment: "m" + - formula: "RH" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "trnapro" - chebi: "CHEBI:29177" - kegg.compound: "C01649" - metanetx.chemical: "MNXM90667" - sbo: "SBO:0000247" - - !!omap - - id: "s_3809" - - name: "Pro-tRNA(Pro)" - - compartment: "m" - - formula: "C5H9NOR" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_3809" + - name: "Pro-tRNA(Pro)" + - compartment: "m" + - formula: "C5H9NOR" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "protrna" - chebi: "CHEBI:29154" - kegg.compound: "C02702" - metanetx.chemical: "MNXM247" - sbo: "SBO:0000247" - - !!omap - - id: "s_3810" - - name: "5-oxo-L-proline" - - compartment: "c" - - formula: "C5H6NO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3810" + - name: "5-oxo-L-proline" + - compartment: "c" + - formula: "C5H6NO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "5oxpro" - chebi: "CHEBI:58402" - kegg.compound: "C01879" - metanetx.chemical: "MNXM722719" - sbo: "SBO:0000247" - - !!omap - - id: "s_3811" - - name: "4a-Hydroxytetrahydrobiopterin" - - compartment: "m" - - formula: "C9H15N5O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3811" + - name: "4a-Hydroxytetrahydrobiopterin" + - compartment: "m" + - formula: "C9H15N5O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "hthbp" - chebi: "CHEBI:15642" - kegg.compound: "C15522" - metanetx.chemical: "MNXM31340" - sbo: "SBO:0000247" - - !!omap - - id: "s_3812" - - name: "Dihydrobiopterin" - - compartment: "m" - - formula: "C9H13N5O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3812" + - name: "Dihydrobiopterin" + - compartment: "m" + - formula: "C9H13N5O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "CE2705" - chebi: "CHEBI:20680" - kegg.compound: "C00268" - metanetx.chemical: "MNXM162257" - sbo: "SBO:0000247" - - !!omap - - id: "s_3813" - - name: "superoxide" - - compartment: "m" - - formula: "O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3813" + - name: "superoxide" + - compartment: "m" + - formula: "O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "o2s" - chebi: "CHEBI:18421" - kegg.compound: "C00704" - metanetx.chemical: "MNXM330" - sbo: "SBO:0000247" - - !!omap - - id: "s_3814" - - name: "2-deoxy-D-glucose 6-phosphate" - - compartment: "c" - - formula: "C6H11O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3814" + - name: "2-deoxy-D-glucose 6-phosphate" + - compartment: "c" + - formula: "C6H11O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "2doxg6p" - chebi: "CHEBI:84760" - kegg.compound: "C06369" - metanetx.chemical: "MNXM3809" - sbo: "SBO:0000247" - 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charge: 1 + - annotation: !!omap - chebi: "CHEBI:61929" - sbo: "SBO:0000247" - - !!omap - - id: "s_3818" - - name: "S-adenosyl-L-methionine" - - compartment: "n" - - formula: "C15H23N6O5S" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_3818" + - name: "S-adenosyl-L-methionine" + - compartment: "n" + - formula: "C15H23N6O5S" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "amet" - chebi: "CHEBI:67040" - kegg.compound: "C00019" - metanetx.chemical: "MNXM16" - sbo: "SBO:0000247" - - !!omap - - id: "s_3819" - - name: "L-lysine-[histone]" - - compartment: "n" - - formula: "C6H13N2OR2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_3819" + - name: "L-lysine-[histone]" + - compartment: "n" + - formula: "C6H13N2OR2" + - charge: 1 + - annotation: !!omap - chebi: "CHEBI:29969" - metanetx.chemical: "MNXM59465" - sbo: "SBO:0000247" - - !!omap - - id: "s_3820" - - name: "S-adenosyl-L-homocysteine" - - compartment: "n" - - formula: "C14H20N6O5S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3820" + - name: "S-adenosyl-L-homocysteine" + - compartment: "n" + - formula: "C14H20N6O5S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ahcys" - chebi: "CHEBI:16680" - kegg.compound: "C00021" - metanetx.chemical: "MNXM19" - sbo: "SBO:0000247" - - !!omap - - id: "s_3821" - - name: "N6-methyl-L-lysine-[histone]" - - compartment: "n" - - formula: "C7H15N2OR2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_3821" + - name: "N6-methyl-L-lysine-[histone]" + - compartment: "n" + - formula: "C7H15N2OR2" + - charge: 1 + - annotation: !!omap - chebi: "CHEBI:61929" - metanetx.chemical: "MNXM63025" - sbo: "SBO:0000247" - - !!omap - - id: "s_3822" - - name: "Zn(2+)" - - compartment: "c" - - formula: "Zn" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_3822" + - name: "Zn(2+)" + - compartment: "c" + - formula: "Zn" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "zn2" - chebi: "CHEBI:29105" - kegg.compound: "C00038" - metanetx.chemical: "MNXM149" - sbo: "SBO:0000247" - - !!omap - - id: "s_3823" - - name: "Zn(2+)" - - compartment: "er" - - formula: "Zn" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_3823" + - name: "Zn(2+)" + - compartment: "er" + - formula: "Zn" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "zn2" - chebi: "CHEBI:29105" - kegg.compound: "C00038" - metanetx.chemical: "MNXM149" - sbo: "SBO:0000247" - - !!omap - - id: "s_3826" - - name: "Ferricytochrome b5" - - compartment: "m" - - formula: "Fe" - - charge: 3 - - annotation: !!omap + - !!omap + - id: "s_3826" + - name: "Ferricytochrome b5" + - compartment: "m" + - formula: "Fe" + - charge: 3 + - annotation: !!omap - bigg.metabolite: "ficytb5" - chebi: "CHEBI:18097" - kegg.compound: "C00996" - metanetx.chemical: "MNXM1083" - sbo: "SBO:0000247" - - !!omap - - id: "s_3827" - - name: "Ferrocytochrome b5" - - compartment: "m" - - formula: "Fe" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_3827" + - name: "Ferrocytochrome b5" + - compartment: "m" + - 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compartment: "er" + - formula: "RX" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:17792" - kegg.compound: "C01322" - metanetx.chemical: "MNXM6428" - sbo: "SBO:0000247" - - !!omap - - id: "s_3831" - - name: "glutathione" - - compartment: "er" - - formula: "C10H16N3O6S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3831" + - name: "glutathione" + - compartment: "er" + - formula: "C10H16N3O6S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "gthrd" - chebi: "CHEBI:57925" - kegg.compound: "C00051" - metanetx.chemical: "MNXM57" - sbo: "SBO:0000247" - - !!omap - - id: "s_3832" - - name: "HX" - - compartment: "er" - - formula: "X" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3832" + - name: "HX" + - compartment: "er" + - formula: "X" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:16042" - kegg.compound: "C00462" - metanetx.chemical: "MNXM55844" - sbo: "SBO:0000247" - - !!omap - - id: "s_3833" - - name: "R-S-glutathione" - - compartment: "er" - 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- id: "s_3836" - - name: "R-S-glutathione" - - compartment: "c" - - formula: "C10H16N3O6SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3836" + - name: "R-S-glutathione" + - compartment: "c" + - formula: "C10H16N3O6SR" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:17021" - kegg.compound: "C02320" - metanetx.chemical: "MNXM3350" - sbo: "SBO:0000247" - - !!omap - - id: "s_3837" - - name: "L-Methionine S-oxide" - - compartment: "c" - - formula: "C5H11NO3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3837" + - name: "L-Methionine S-oxide" + - compartment: "c" + - formula: "C5H11NO3S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "metsox_S__L" - chebi: "CHEBI:17016" - kegg.compound: "C02989" - metanetx.chemical: "MNXM2246" - sbo: "SBO:0000247" - - !!omap - - id: "s_3838" - - name: "Ala-Gly" - - compartment: "v" - - formula: "C5H10N2O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3838" + - name: "Ala-Gly" + - compartment: "v" + - formula: "C5H10N2O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "L_alagly" - chebi: "CHEBI:73757" - metanetx.chemical: "MNXM15783" - sbo: "SBO:0000247" - - !!omap - - id: "s_3839" - - name: "L-glycine" - - compartment: "v" - - formula: "C2H5NO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3839" + - name: "L-glycine" + - compartment: "v" + - formula: "C2H5NO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "gly" - chebi: "CHEBI:15428" - kegg.compound: "C00037" - metanetx.chemical: "MNXM29" - sbo: "SBO:0000247" - - !!omap - - id: "s_3840" - - name: "Ala-Leu" - - compartment: "v" - - formula: "C9H18N2O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3840" + - name: "Ala-Leu" + - compartment: "v" + - formula: "C9H18N2O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ala_L_ile__L" - chebi: "CHEBI:73770" - metanetx.chemical: "MNXM15786" - sbo: "SBO:0000247" - - !!omap - - id: "s_3841" - - name: "Threo-3-hydroxy-L-aspartate" - - compartment: "c" - - formula: "C4H6NO5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3841" + - name: "Threo-3-hydroxy-L-aspartate" + - compartment: "c" + - formula: "C4H6NO5" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:57251" - kegg.compound: "C11511" - metanetx.chemical: "MNXM4918" - sbo: "SBO:0000247" - - !!omap - - id: "s_3842" - - name: "RX" - - compartment: "p" - - formula: "RX" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3842" + - name: "RX" + - compartment: "p" + - formula: "RX" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:17792" - kegg.compound: "C01322" - metanetx.chemical: "MNXM6428" - sbo: "SBO:0000247" - - !!omap - - id: "s_3843" - - name: "glutathione" - - compartment: "p" - - formula: "C10H16N3O6S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3843" + - name: "glutathione" + - compartment: "p" + - formula: "C10H16N3O6S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "gthrd" - chebi: "CHEBI:57925" - kegg.compound: "C00051" - metanetx.chemical: "MNXM57" - sbo: "SBO:0000247" - - !!omap - - id: "s_3844" - - name: "HX" - - compartment: "p" - - formula: "X" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3844" + - name: "HX" + - compartment: "p" + - formula: "X" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:16042" - kegg.compound: "C00462" - metanetx.chemical: "MNXM55844" - sbo: "SBO:0000247" - - !!omap - - id: "s_3845" - - name: "R-S-glutathione" - - compartment: "p" - - formula: "C10H16N3O6SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3845" + - name: "R-S-glutathione" + - compartment: "p" + - formula: "C10H16N3O6SR" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:17021" - kegg.compound: "C02320" - metanetx.chemical: "MNXM3350" - sbo: "SBO:0000247" - - !!omap - - id: "s_3846" - - name: "dehydroascorbate" - - compartment: "c" - - formula: "C6H6O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3846" + - name: "dehydroascorbate" + - compartment: "c" + - formula: "C6H6O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dhdascb" - chebi: "CHEBI:27956" - kegg.compound: "C05422" - metanetx.chemical: "MNXM250" - sbo: "SBO:0000247" - - !!omap - - id: "s_3847" - - name: "ascorbate" - - compartment: "c" - - formula: "C6H8O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3847" + - name: "ascorbate" + - compartment: "c" + - formula: "C6H8O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ascb__L" - chebi: "CHEBI:38290" - kegg.compound: "C00072" - metanetx.chemical: "MNXM129" - sbo: "SBO:0000247" - - !!omap - - id: "s_3848" - - name: "dehydroascorbate" - - compartment: "p" - - formula: "C6H6O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3848" + - name: "dehydroascorbate" + - compartment: "p" + - formula: "C6H6O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dhdascb" - chebi: "CHEBI:27956" - kegg.compound: "C05422" - metanetx.chemical: "MNXM250" - sbo: "SBO:0000247" - - !!omap - - id: "s_3849" - - name: "glutathione disulfide" - - compartment: "p" - - formula: "C20H30N6O12S2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3849" + - name: "glutathione disulfide" + - compartment: "p" + - formula: "C20H30N6O12S2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "gthox" - chebi: "CHEBI:58297" - kegg.compound: "C00127" - metanetx.chemical: "MNXM151" - sbo: "SBO:0000247" - - !!omap - - id: "s_3850" - - name: "ascorbate" - - compartment: "p" - - formula: "C6H8O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3850" + - name: "ascorbate" + - compartment: "p" + - formula: "C6H8O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ascb__L" - chebi: "CHEBI:38290" - kegg.compound: "C00072" - metanetx.chemical: "MNXM129" - sbo: "SBO:0000247" - - !!omap - - id: "s_3851" - - name: "Cyanamide" - - compartment: "c" - - formula: "CH2N2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3851" + - name: "Cyanamide" + - compartment: "c" + - formula: "CH2N2" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:16698" - kegg.compound: "C01566" - metanetx.chemical: "MNXM4538" - sbo: "SBO:0000247" - - !!omap - - id: "s_3852" - - name: "aldehydo-D-ribose 5-phosphate" - - compartment: "c" - - formula: "C5H9O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3852" + - name: "aldehydo-D-ribose 5-phosphate" + - compartment: "c" + - formula: "C5H9O8P" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:58273" - kegg.compound: "C00117" - metanetx.chemical: "MNXM722712" - sbo: "SBO:0000247" - - !!omap - - id: "s_3853" - - name: "R-S-Cysteinylglycine" - - compartment: "c" - - formula: "C5H9N2O3SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3853" + - name: "R-S-Cysteinylglycine" + - compartment: "c" + - formula: "C5H9N2O3SR" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:8744" - kegg.compound: "C05729" - metanetx.chemical: "MNXM7734" - sbo: "SBO:0000247" - - !!omap - - id: "s_3854" - - name: "S-Substituted L-cysteine" - - compartment: "c" - - formula: "C3H6NO2SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3854" + - name: "S-Substituted L-cysteine" + - compartment: "c" + - formula: "C3H6NO2SR" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:47910" - kegg.compound: "C05726" - metanetx.chemical: "MNXM96107" - sbo: "SBO:0000247" - - !!omap - - id: "s_3855" - - name: "iron(3+)" - - compartment: "m" - - formula: "Fe" - - charge: 3 - - annotation: !!omap + - !!omap + - id: "s_3855" + - name: "iron(3+)" + - compartment: "m" + - formula: "Fe" + - charge: 3 + - annotation: !!omap - bigg.metabolite: "fe3" - chebi: "CHEBI:29034" - kegg.compound: "C14819" - metanetx.chemical: "MNXM196" - sbo: "SBO:0000247" - - !!omap - - id: "s_3856" - - name: "Glycyl-tRNA(Ala)" - - compartment: "c" - - formula: "C2H5NOR" - - charge: 1 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_3857" - - name: "D-tyrosyl-tRNA(Tyr)" - - compartment: "c" - - formula: "C9H11NO2R" - - charge: 1 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_3858" - - name: "D-tyrosine" - - compartment: "c" - - formula: "C9H11NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3856" + - name: "Glycyl-tRNA(Ala)" + - compartment: "c" + - formula: "C2H5NOR" + - charge: 1 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_3857" + - name: "D-tyrosyl-tRNA(Tyr)" + - compartment: "c" + - formula: "C9H11NO2R" + - charge: 1 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_3858" + - name: "D-tyrosine" + - compartment: "c" + - formula: "C9H11NO3" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:28479" - kegg.compound: "C06420" - metanetx.chemical: "MNXM5704" - sbo: "SBO:0000247" - - !!omap - - id: "s_3859" - - name: "4-nitrophenyl phosphate" - - compartment: "c" - - formula: "C6H4NO6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3859" + - name: "4-nitrophenyl phosphate" + - compartment: "c" + - formula: "C6H4NO6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "HC01104" - chebi: "CHEBI:61146" - kegg.compound: "C03360" - metanetx.chemical: "MNXM3867" - sbo: "SBO:0000247" - - !!omap - - id: "s_3860" - - name: "4-nitrophenol" - - compartment: "c" - - formula: "C6H4NO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3860" + - name: "4-nitrophenol" + - compartment: "c" + - formula: "C6H4NO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "4nph" - chebi: "CHEBI:57917" - kegg.compound: "C00870" - metanetx.chemical: "MNXM526" - sbo: "SBO:0000247" - - !!omap - - id: "s_3861" - - name: "L-iditol" - - compartment: "c" - - formula: "C6H14O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3861" + - name: "L-iditol" + - compartment: "c" + - formula: "C6H14O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "C01507" - chebi: "CHEBI:18202" - kegg.compound: "C01507" - metanetx.chemical: "MNXM3633" - sbo: "SBO:0000247" - - !!omap - - id: "s_3862" - - name: "alpha-D-Galactose" - - compartment: "c" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3862" + - name: "alpha-D-Galactose" + - compartment: "c" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "a_gal__D" - chebi: "CHEBI:28061" - kegg.compound: "C00984" - metanetx.chemical: "MNXM390" - sbo: "SBO:0000247" - - !!omap - - id: "s_3863" - - name: "3-hydroxy-2-methylpropanoyl-CoA" - - compartment: "m" - - formula: "C25H38N7O18P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_3863" + - name: "3-hydroxy-2-methylpropanoyl-CoA" + - compartment: "m" + - formula: "C25H38N7O18P3S" + - charge: -4 + - annotation: !!omap - chebi: "CHEBI:57340" - kegg.compound: "C04047" - metanetx.chemical: "MNXM1034" - sbo: "SBO:0000247" - - !!omap - - id: "s_3864" - - name: "3-hydroxy-2-methylpropanoate" - - compartment: "m" - - formula: "C4H7O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3864" + - name: "3-hydroxy-2-methylpropanoate" + - compartment: "m" + - formula: "C4H7O3" + - charge: -1 + - annotation: !!omap - 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id: "s_3867" + - name: "2-Phenylacetamide" + - compartment: "c" + - formula: "C8H9NO" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pad" - chebi: "CHEBI:16562" - kegg.compound: "C02505" - metanetx.chemical: "MNXM2073" - sbo: "SBO:0000247" - - !!omap - - id: "s_3868" - - name: "(Indol-3-yl)acetamide" - - compartment: "c" - - formula: "C10H10N2O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3868" + - name: "(Indol-3-yl)acetamide" + - compartment: "c" + - formula: "C10H10N2O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "iad" - chebi: "CHEBI:16031" - kegg.compound: "C02693" - metanetx.chemical: "MNXM2239" - sbo: "SBO:0000247" - - !!omap - - id: "s_3871" - - name: "Acrylic acid" - - compartment: "c" - - formula: "C3H3O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3871" + - name: "Acrylic acid" + - compartment: "c" + - formula: "C3H3O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "acryl" - chebi: "CHEBI:37080" - kegg.compound: "C00511" - 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- annotation: !!omap + - !!omap + - id: "s_3914" + - name: "nitrate" + - compartment: "c" + - formula: "NO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "no3" - chebi: "CHEBI:17632" - kegg.compound: "C00244" - metanetx.chemical: "MNXM207" - sbo: "SBO:0000247" - - !!omap - - id: "s_3915" - - name: "(R)-Lipoate" - - compartment: "c" - - formula: "C8H13O2S2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3915" + - name: "(R)-Lipoate" + - compartment: "c" + - formula: "C8H13O2S2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lipoate" - chebi: "CHEBI:83088" - kegg.compound: "C16241" - metanetx.chemical: "MNXM1484" - sbo: "SBO:0000247" - - !!omap - - id: "s_3916" - - name: "Lipoyl-AMP" - - compartment: "c" - - formula: "C18H25N5O8PS2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3916" + - name: "Lipoyl-AMP" + - compartment: "c" + - formula: "C18H25N5O8PS2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lipoamp" - chebi: "CHEBI:83091" - kegg.compound: "C16238" - metanetx.chemical: "MNXM2392" - sbo: "SBO:0000247" - - !!omap - - id: "s_3917" - - name: "Apoprotein" - - compartment: "c" - - formula: "NH2R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3917" + - name: "Apoprotein" + - compartment: "c" + - formula: "NH2R" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:13850" - kegg.compound: "C16240" - metanetx.chemical: "MNXM91491" - sbo: "SBO:0000247" - - !!omap - - id: "s_3918" - - name: "Protein N6-(lipoyl)lysine" - - compartment: "c" - - formula: "C8H14NOS2R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3918" + - name: "Protein N6-(lipoyl)lysine" + - compartment: "c" + - formula: "C8H14NOS2R" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:80399" - kegg.compound: "C16237" - metanetx.chemical: "MNXM96070" - sbo: "SBO:0000247" - - !!omap - - id: "s_3923" - - name: "N-(4-oxoglutarate)-L-cysteinylglycine" - - compartment: "c" - - formula: "C10H12N2O7S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3923" + - name: "N-(4-oxoglutarate)-L-cysteinylglycine" + - compartment: "c" + - formula: "C10H12N2O7S" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:138256" - sbo: "SBO:0000247" - - !!omap - - id: "s_3924" - - name: "N-(4-oxoglutarate)-L-cysteinylglycine" - - compartment: "m" - - formula: "C10H12N2O7S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3924" + - name: "N-(4-oxoglutarate)-L-cysteinylglycine" + - compartment: "m" + - formula: "C10H12N2O7S" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:138256" - sbo: "SBO:0000247" - - !!omap - - id: "s_3925" - - name: "L-cysteinylglycine" - - compartment: "m" - - formula: "C5H10N2O3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3925" + - name: "L-cysteinylglycine" + - compartment: "m" + - formula: "C5H10N2O3S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "cgly" - chebi: "CHEBI:4047" - kegg.compound: "C01419" - metanetx.chemical: "MNXM683" - sbo: "SBO:0000247" - - !!omap - - id: "s_3926" - - name: "chloride" - - compartment: "g" - - formula: "Cl" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3926" + - name: "chloride" + - compartment: "g" + - formula: "Cl" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "cl" - chebi: "CHEBI:17996" - kegg.compound: "C00698" - metanetx.chemical: "MNXM43" - sbo: "SBO:0000247" - - !!omap - - id: "s_3927" - - name: "ribonucleoside 5'-triphosphate" - - compartment: "c" - - formula: "C5H8O13P3R" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_3927" + - name: "ribonucleoside 5'-triphosphate" + - compartment: "c" + - formula: "C5H8O13P3R" + - charge: -4 + - annotation: !!omap - chebi: "CHEBI:61557" - kegg.compound: "C03802" - metanetx.chemical: "MNXM96380" - sbo: "SBO:0000247" - - !!omap - - id: "s_3928" - - name: "ribonucleoside 5'-phosphate" - - compartment: "c" - - formula: "C5H8O7PR" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3928" + - name: "ribonucleoside 5'-phosphate" + - compartment: "c" + - formula: "C5H8O7PR" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:58043" - kegg.compound: "C00171" - metanetx.chemical: "MNXM80910" - sbo: "SBO:0000247" - - !!omap - - id: "s_3929" - - name: "2'-deoxyribonucleoside 5'-triphosphate" - - compartment: "c" - - formula: "C5H8O12P3R" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_3929" + - name: "2'-deoxyribonucleoside 5'-triphosphate" + - compartment: "c" + - formula: "C5H8O12P3R" + - charge: -4 + - annotation: !!omap - chebi: "CHEBI:61560" - kegg.compound: "C00677" - metanetx.chemical: "MNXM96330" - sbo: "SBO:0000247" - - !!omap - - id: "s_3930" - - name: "2'-deoxyribonucleoside 5'-phosphate" - - compartment: "c" - - formula: "C5H8O6PR" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3930" + - name: "2'-deoxyribonucleoside 5'-phosphate" + - compartment: "c" + - formula: "C5H8O6PR" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:65317" - kegg.compound: "C00676" - metanetx.chemical: "MNXM6057" - sbo: "SBO:0000247" - - !!omap - - id: "s_3931" - - name: "superoxide" - - compartment: "c" - - formula: "O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3931" + - name: "superoxide" + - compartment: "c" + - formula: "O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "o2s" - chebi: "CHEBI:18421" - kegg.compound: "C00704" - metanetx.chemical: "MNXM330" - sbo: "SBO:0000247" - - !!omap - - id: "s_3932" - - name: "G00012" - - compartment: "er" - - formula: "C50H82N4O37" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3932" + - name: "G00012" + - compartment: "er" + - formula: "C50H82N4O37" + - charge: 0 + - annotation: !!omap - metanetx.chemical: "MNXM9328" - sbo: "SBO:0000247" - - !!omap - - id: "s_3933" - - name: "D-mannose" - - compartment: "er" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3933" + - name: "D-mannose" + - compartment: "er" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "man" - chebi: "CHEBI:4208" - kegg.compound: "C00159" - metanetx.chemical: "MNXM182" - sbo: "SBO:0000247" - - !!omap - - id: "s_3934" - - name: "Ethylnitronate" - - compartment: "c" - - formula: "C2H5NO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3934" + - name: "Ethylnitronate" + - compartment: "c" + - formula: "C2H5NO2" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:16268" - kegg.compound: "C18091" - metanetx.chemical: "MNXM2143" - sbo: "SBO:0000247" - - !!omap - - id: "s_3935" - - name: "Nitrite" - - compartment: "c" - - formula: "NO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3935" + - name: "Nitrite" + - compartment: "c" + - formula: "NO2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "no2" - chebi: "CHEBI:16301" - kegg.compound: "C00088" - metanetx.chemical: "MNXM107" - sbo: "SBO:0000247" - - !!omap - - id: "s_3936" - - name: "iron(3+)" - - compartment: "e" - - formula: "Fe" - - charge: 3 - - annotation: !!omap + - !!omap + - id: "s_3936" + - name: "iron(3+)" + - compartment: "e" + - formula: "Fe" + - charge: 3 + - annotation: !!omap - bigg.metabolite: "fe3" - kegg.compound: "C14819" - metanetx.chemical: "MNXM196" - sbo: "SBO:0000247" - - !!omap - - id: "s_3937" - - name: "Acyl-CoA" - - compartment: "er" - - formula: "C22H31N7O17P3SR" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_3937" + - name: "Acyl-CoA" + - compartment: "er" + - formula: "C22H31N7O17P3SR" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "acoa" - chebi: "CHEBI:58342" - kegg.compound: "C00040" - metanetx.chemical: "MNXM44" - sbo: "SBO:0000247" - - !!omap - - id: "s_3938" - - name: "1-acyl-sn-glycerol 3-phosphate" - - compartment: "er" - - formula: "C4H6O7PR" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3938" + - name: "1-acyl-sn-glycerol 3-phosphate" + - compartment: "er" + - formula: "C4H6O7PR" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "1ag3p_SC" - chebi: "CHEBI:57970" - kegg.compound: "C00681" - metanetx.chemical: "MNXM145527" - sbo: "SBO:0000247" - - !!omap - - id: "s_3939" - - name: "1,2-diacyl-sn-glycerol 3-phosphate" - - compartment: "er" - - formula: "C5H5O8PR2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3939" + - name: "1,2-diacyl-sn-glycerol 3-phosphate" + - compartment: "er" + - formula: "C5H5O8PR2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pa_EC" - chebi: "CHEBI:58608" - kegg.compound: "C00416" - metanetx.chemical: "MNXM96054" - sbo: "SBO:0000247" - - !!omap - - id: "s_3940" - - name: "Peptide diphthine" - - compartment: "c" - - formula: "C13H20N4O3R2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3940" + - name: "Peptide diphthine" + - compartment: "c" + - formula: "C13H20N4O3R2" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:18054" - kegg.compound: "C01573" - metanetx.chemical: "MNXM3980" - sbo: "SBO:0000247" - - !!omap - - id: "s_3941" - - name: "Peptide diphthamide" - - compartment: "c" - - formula: "C13H22N5O2R2" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_3941" + - name: "Peptide diphthamide" + - compartment: "c" + - formula: "C13H22N5O2R2" + - charge: 1 + - annotation: !!omap - chebi: "CHEBI:82696" - kegg.compound: "C02872" - metanetx.chemical: "MNXM51194" - sbo: "SBO:0000247" - - !!omap - - id: "s_3942" - - name: "8-oxo-dGTP" - - compartment: "p" - - formula: "C10H12N5O14P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_3942" + - name: "8-oxo-dGTP" + - compartment: "p" + - formula: "C10H12N5O14P3" + - charge: -4 + - annotation: !!omap - kegg.compound: "C19967" - metanetx.chemical: "MNXM4425" - sbo: "SBO:0000247" - - !!omap - - id: "s_3943" - - name: "8-oxo-dGMP" - - compartment: "p" - - formula: "C10H12N5O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3943" + - name: "8-oxo-dGMP" + - compartment: "p" + - formula: "C10H12N5O8P" + - charge: -2 + - annotation: !!omap - kegg.compound: "C19968" - metanetx.chemical: "MNXM2497" - sbo: "SBO:0000247" - - !!omap - - id: "s_3944" - - name: "Apoprotein" - - compartment: "m" - - formula: "NH2R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3944" + - name: "Apoprotein" + - compartment: "m" + - formula: "NH2R" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:13850" - kegg.compound: "C16240" - metanetx.chemical: "MNXM91491" - sbo: "SBO:0000247" - - !!omap - - id: "s_3945" - - name: "Protein N6-(octanoyl)lysine" - - compartment: "m" - - formula: "C8H16NOR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3945" + - name: "Protein N6-(octanoyl)lysine" + - compartment: "m" + - formula: "C8H16NOR" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:80398" - kegg.compound: "C16236" - metanetx.chemical: "MNXM4090" - sbo: "SBO:0000247" - - !!omap - - id: "s_3946" - - name: "Lipoyl-[acp]" - - compartment: "m" - - formula: "C8H13OS3R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3946" + - name: "Lipoyl-[acp]" + - compartment: "m" + - formula: "C8H13OS3R" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "lipACP" - chebi: "CHEBI:80400" - kegg.compound: "C16239" - metanetx.chemical: "MNXM19093" - sbo: "SBO:0000247" - - !!omap - - id: "s_3947" - - name: "Protein N6-(lipoyl)lysine" - - compartment: "m" - - formula: "C8H14NOS2R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3947" + - name: "Protein N6-(lipoyl)lysine" + - compartment: "m" + - formula: "C8H14NOS2R" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:80399" - kegg.compound: "C16237" - metanetx.chemical: "MNXM96070" - sbo: "SBO:0000247" - - !!omap - - id: "s_3948" - - name: "beta-D-Fructose 6-phosphate" - - compartment: "c" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3948" + - name: "beta-D-Fructose 6-phosphate" + - compartment: "c" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "f6p_B" - chebi: "CHEBI:57634" - kegg.compound: "C05345" - metanetx.chemical: "MNXM89621" - sbo: "SBO:0000247" - - !!omap - - id: "s_3949" - - name: "beta-D-Glucose" - - compartment: "c" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3949" + - name: "beta-D-Glucose" + - compartment: "c" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "glc__bD" - chebi: "CHEBI:15903" - kegg.compound: "C00221" - metanetx.chemical: "MNXM105" - sbo: "SBO:0000247" - - !!omap - - id: "s_3950" - - name: "beta-D-Glucose 6-phosphate" - - compartment: "c" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3950" + - name: "beta-D-Glucose 6-phosphate" + - compartment: "c" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "g6p_B" - chebi: "CHEBI:58247" - kegg.compound: "C01172" - metanetx.chemical: "MNXM508" - sbo: "SBO:0000247" - - !!omap - - id: "s_3951" - - name: "alpha-D-Glucose" - - compartment: "c" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3951" + - name: "alpha-D-Glucose" + - compartment: "c" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:17925" - kegg.compound: "C00267" - metanetx.chemical: "MNXM99" - sbo: "SBO:0000247" - - !!omap - - id: "s_3952" - - name: "alpha-D-Glucose 6-phosphate" - - compartment: "c" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3952" + - name: "alpha-D-Glucose 6-phosphate" + - compartment: "c" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "g6p_A" - chebi: "CHEBI:58225" - kegg.compound: "C00668" - metanetx.chemical: "MNXM215" - sbo: "SBO:0000247" - - !!omap - - id: "s_3953" - - name: "D-Glucosamine" - - compartment: "c" - - formula: "C6H14NO5" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_3953" + - name: "D-Glucosamine" + - compartment: "c" + - formula: "C6H14NO5" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "gam" - chebi: "CHEBI:47977" - kegg.compound: "C00329" - metanetx.chemical: "MNXM533" - sbo: "SBO:0000247" - - !!omap - - id: "s_3954" - - name: "beta-D-Fructose" - - compartment: "c" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3954" + - name: "beta-D-Fructose" + - compartment: "c" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "fru_B" - chebi: "CHEBI:28645" - kegg.compound: "C02336" - metanetx.chemical: "MNXM1542" - sbo: "SBO:0000247" - - !!omap - - id: "s_3958" - - name: "D-Glycerate" - - compartment: "c" - - formula: "C3H5O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3958" + - name: "D-Glycerate" + - compartment: "c" + - formula: "C3H5O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "glyc__R" - chebi: "CHEBI:16659" - kegg.compound: "C00258" - metanetx.chemical: "MNXM189" - sbo: "SBO:0000247" - - !!omap - - id: "s_3959" - - name: "2-Propynal" - - compartment: "c" - - formula: "C3H2O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3959" + - name: "2-Propynal" + - compartment: "c" + - formula: "C3H2O" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:27976" - kegg.compound: "C05985" - metanetx.chemical: "MNXM2716" - sbo: "SBO:0000247" - - !!omap - - id: "s_3960" - - name: "Propynoate" - - compartment: "c" - - formula: "C3HO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3960" + - name: "Propynoate" + - compartment: "c" + - formula: "C3HO2" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:15364" - kegg.compound: "C00804" - metanetx.chemical: "MNXM2422" - sbo: "SBO:0000247" - - !!omap - - id: "s_3961" - - name: "D-Glucuronolactone" - - compartment: "c" - - formula: "C6H8O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3961" + - name: "D-Glucuronolactone" + - compartment: "c" + - formula: "C6H8O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "glcurn" - chebi: "CHEBI:18268" - kegg.compound: "C02670" - metanetx.chemical: "MNXM17108" - sbo: "SBO:0000247" - - !!omap - - id: "s_3962" - - name: "D-Glucarate" - - compartment: "c" - - formula: "C6H8O8" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3962" + - name: "D-Glucarate" + - compartment: "c" + - formula: "C6H8O8" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "glcr" - chebi: "CHEBI:30612" - kegg.compound: "C00818" - metanetx.chemical: "MNXM744" - sbo: "SBO:0000247" - - !!omap - - id: "s_3963" - - name: "4-Trimethylammoniobutanal" - - compartment: "c" - - formula: "C7H16NO" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_3963" + - name: "4-Trimethylammoniobutanal" + - compartment: "c" + - formula: "C7H16NO" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "4tmeabut" - chebi: "CHEBI:18020" - kegg.compound: "C01149" - metanetx.chemical: "MNXM940" - sbo: "SBO:0000247" - - !!omap - - id: "s_3964" - - name: "4-Trimethylammoniobutanoate" - - compartment: "c" - - formula: "C7H15NO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3964" + - name: "4-Trimethylammoniobutanoate" + - compartment: "c" + - formula: "C7H15NO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "4tmeabutn" - chebi: "CHEBI:1941" - kegg.compound: "C01181" - metanetx.chemical: "MNXM626" - sbo: "SBO:0000247" - - !!omap - - id: "s_3965" - - name: "(S)-Methylmalonate semialdehyde" - - compartment: "c" - - formula: "C4H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3965" + - name: "(S)-Methylmalonate semialdehyde" + - compartment: "c" + - formula: "C4H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "mmtsa" - chebi: "CHEBI:62413" - kegg.compound: "C06002" - metanetx.chemical: "MNXM933" - sbo: "SBO:0000247" - - !!omap - - id: "s_3966" - - name: "Methylmalonate" - - compartment: "c" - - formula: "C4H4O4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3966" + - name: "Methylmalonate" + - compartment: "c" + - formula: "C4H4O4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "mmal" - chebi: "CHEBI:17453" - kegg.compound: "C02170" - metanetx.chemical: "MNXM1572" - sbo: "SBO:0000247" - - !!omap - - id: "s_3967" - - name: "Imidazole-4-acetaldehyde" - - compartment: "c" - - formula: "C5H6N2O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3967" + - name: "Imidazole-4-acetaldehyde" + - compartment: "c" + - formula: "C5H6N2O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "im4act" - chebi: "CHEBI:27398" - kegg.compound: "C05130" - metanetx.chemical: "MNXM1745" - sbo: "SBO:0000247" - - !!omap - - id: "s_3968" - - name: "Imidazole-4-acetate" - - compartment: "c" - - formula: "C5H5N2O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3968" + - name: "Imidazole-4-acetate" + - compartment: "c" + - formula: "C5H5N2O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "im4ac" - chebi: "CHEBI:16974" - kegg.compound: "C02835" - metanetx.chemical: "MNXM1330" - sbo: "SBO:0000247" - - !!omap - - id: "s_3969" - - name: "3alpha,7alpha-Dihydroxy-5beta-cholestan-26-al" - - compartment: "c" - - formula: "C27H46O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3969" + - name: "3alpha,7alpha-Dihydroxy-5beta-cholestan-26-al" + - compartment: "c" + - formula: "C27H46O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "xol7ah2al" - chebi: "CHEBI:27428" - kegg.compound: "C05445" - metanetx.chemical: "MNXM1174" - sbo: "SBO:0000247" - - !!omap - - id: "s_3970" - - name: "3alpha,7alpha-Dihydroxy-5beta-cholestanate" - - compartment: "c" - - formula: "C27H45O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3970" + - name: "3alpha,7alpha-Dihydroxy-5beta-cholestanate" + - compartment: "c" + - formula: "C27H45O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "dhcholestanate" - chebi: "CHEBI:16577" - kegg.compound: "C04554" - metanetx.chemical: "MNXM484588" - sbo: "SBO:0000247" - - !!omap - - id: "s_3971" - - name: "5-Hydroxyindoleacetaldehyde" - - compartment: "c" - - formula: "C10H9NO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3971" + - name: "5-Hydroxyindoleacetaldehyde" + - compartment: "c" + - formula: "C10H9NO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "5hoxindact" - chebi: "CHEBI:50157" - kegg.compound: "C05634" - metanetx.chemical: "MNXM1057" - sbo: "SBO:0000247" - - !!omap - - id: "s_3972" - - name: "5-Hydroxyindoleacetate" - - compartment: "c" - - formula: "C10H8NO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3972" + - name: "5-Hydroxyindoleacetate" + - compartment: "c" + - formula: "C10H8NO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "5hoxindoa" - chebi: "CHEBI:27823" - kegg.compound: "C05635" - metanetx.chemical: "MNXM1961" - sbo: "SBO:0000247" - - !!omap - - id: "s_3973" - - name: "N4-Acetylaminobutanal" - - compartment: "c" - - formula: "C6H11NO2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3973" + - name: "N4-Acetylaminobutanal" + - compartment: "c" + - formula: "C6H11NO2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "n4abutn" - chebi: "CHEBI:7386" - kegg.compound: "C05936" - metanetx.chemical: "MNXM1527" - sbo: "SBO:0000247" - - !!omap - - id: "s_3974" - - name: "4-Acetamidobutanoate" - - compartment: "c" - - formula: "C6H10NO3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3974" + - name: "4-Acetamidobutanoate" + - compartment: "c" + - formula: "C6H10NO3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "4aabutn" - chebi: "CHEBI:11951" - kegg.compound: "C02946" - metanetx.chemical: "MNXM2083" - sbo: "SBO:0000247" - - !!omap - - id: "s_3975" - - name: "trans-3-Chloroallyl aldehyde" - - compartment: "c" - - formula: "C3H3ClO" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3975" + - name: "trans-3-Chloroallyl aldehyde" + - compartment: "c" + - formula: "C3H3ClO" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:28452" - kegg.compound: "C06613" - metanetx.chemical: "MNXM5312" - sbo: "SBO:0000247" - - !!omap - - id: "s_3976" - - name: "trans-3-Chloroacrylic acid" - - compartment: "c" - - formula: "C3H2ClO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3976" + - name: "trans-3-Chloroacrylic acid" + - compartment: "c" + - formula: "C3H2ClO2" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:19982" - kegg.compound: "C06614" - metanetx.chemical: "MNXM6086" - sbo: "SBO:0000247" - - !!omap - - id: "s_3977" - - name: "cis-3-Chloroallyl aldehyde" - - compartment: "c" - - formula: "C3H3ClO" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3977" + - name: "cis-3-Chloroallyl aldehyde" + - compartment: "c" + - formula: "C3H3ClO" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:80465" - kegg.compound: "C16348" - metanetx.chemical: "MNXM6216" - sbo: "SBO:0000247" - - !!omap - - id: "s_3978" - - name: "cis-3-Chloroacrylic acid" - - compartment: "c" - - formula: "C3H2ClO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3978" + - name: "cis-3-Chloroacrylic acid" + - compartment: "c" + - formula: "C3H2ClO2" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:27397" - kegg.compound: "C06615" - metanetx.chemical: "MNXM46935" - sbo: "SBO:0000247" - - !!omap - - id: "s_3979" - - name: "Chloroacetaldehyde" - - compartment: "c" - - formula: "C2H3ClO" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3979" + - name: "Chloroacetaldehyde" + - compartment: "c" + - formula: "C2H3ClO" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:27871" - kegg.compound: "C06754" - metanetx.chemical: "MNXM1816" - sbo: "SBO:0000247" - - !!omap - - id: "s_3980" - - name: "Chloroacetic acid" - - compartment: "c" - - formula: "C2H2ClO2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3980" + - name: "Chloroacetic acid" + - compartment: "c" + - formula: "C2H2ClO2" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:27869" - kegg.compound: "C06755" - metanetx.chemical: "MNXM1468" - sbo: "SBO:0000247" - - !!omap - - id: "s_3981" - - name: "Perillyl aldehyde" - - compartment: "c" - - formula: "C10H14O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3981" + - name: "Perillyl aldehyde" + - compartment: "c" + - formula: "C10H14O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pylald" - chebi: "CHEBI:15421" - kegg.compound: "C02576" - metanetx.chemical: "MNXM2149" - sbo: "SBO:0000247" - - !!omap - - id: "s_3982" - - name: "Perillic acid" - - compartment: "c" - - formula: "C10H13O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3982" + - name: "Perillic acid" + - compartment: "c" + - formula: "C10H13O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "peracd" - chebi: "CHEBI:36999" - kegg.compound: "C11924" - metanetx.chemical: "MNXM2414" - sbo: "SBO:0000247" - - !!omap - - id: "s_3983" - - name: "2-trans,6-trans-Farnesal" - - compartment: "c" - - formula: "C15H24O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3983" + - name: "2-trans,6-trans-Farnesal" + - compartment: "c" + - formula: "C15H24O" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:15894" - kegg.compound: "C03461" - metanetx.chemical: "MNXM1959" - sbo: "SBO:0000247" - - !!omap - - id: "s_3984" - - name: "Farnesoic acid" - - compartment: "c" - - formula: "C15H23O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3984" + - name: "Farnesoic acid" + - compartment: "c" + - formula: "C15H23O2" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:84162" - kegg.compound: "C16502" - metanetx.chemical: "MNXM3989" - sbo: "SBO:0000247" - - !!omap - - id: "s_3985" - - name: "phospholipid" - - compartment: "erm" - - formula: "C5H6O8PR3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3985" + - name: "phospholipid" + - compartment: "erm" + - formula: "C5H6O8PR3" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:16247" - kegg.compound: "C00865" - sbo: "SBO:0000247" - - !!omap - - id: "s_3986" - - name: "phospholipid" - - compartment: "gm" - - formula: "C5H6O8PR3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3986" + - name: "phospholipid" + - compartment: "gm" + - formula: "C5H6O8PR3" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:16247" - kegg.compound: "C00865" - sbo: "SBO:0000247" - - !!omap - - id: "s_3987" - - name: "ADP" - - compartment: "erm" - - formula: "C10H12N5O10P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_3987" + - name: "ADP" + - compartment: "erm" + - formula: "C10H12N5O10P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "adp" - chebi: "CHEBI:456216" - kegg.compound: "C00008" - metanetx.chemical: "MNXM7" - sbo: "SBO:0000247" - - !!omap - - id: "s_3988" - - name: "1-oleoyl-sn-glycerol" - - compartment: "c" - - formula: "C21H40O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3988" + - name: "1-oleoyl-sn-glycerol" + - compartment: "c" + - formula: "C21H40O4" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:75757" - metanetx.chemical: "MNXM62354" - sbo: "SBO:0000247" - - !!omap - - id: "s_3989" - - name: "G10526" - - compartment: "er" - - formula: "C66H112N2O42P2R" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3989" + - name: "G10526" + - compartment: "er" + - formula: "C66H112N2O42P2R" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:132511" - sbo: "SBO:0000247" - - !!omap - - id: "s_3990" - - name: "G00006" - - compartment: "er" - - formula: "C78H132N2O52P2R" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3990" + - name: "G00006" + - compartment: "er" + - formula: "C78H132N2O52P2R" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:132515" - sbo: "SBO:0000247" - - !!omap - - id: "s_3991" - - name: "carnosine" - - compartment: "c" - - formula: "C9H14N4O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3991" + - name: "carnosine" + - compartment: "c" + - formula: "C9H14N4O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "carn" - chebi: "CHEBI:15727" - kegg.compound: "C00386" - metanetx.chemical: "MNXM1419" - sbo: "SBO:0000247" - - !!omap - - id: "s_3992" - - name: "anserine" - - compartment: "c" - - formula: "C10H16N4O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3992" + - name: "anserine" + - compartment: "c" + - formula: "C10H16N4O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ans" - chebi: "CHEBI:18323" - kegg.compound: "C01262" - metanetx.chemical: "MNXM2639" - sbo: "SBO:0000247" - - !!omap - - id: "s_3993" - - name: "G10595" - - compartment: "er" - - formula: "C72H122N2O47P2R" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3993" + - name: "G10595" + - compartment: "er" + - formula: "C72H122N2O47P2R" + - charge: -2 + - annotation: !!omap - metanetx.chemical: "MNXM9262" - sbo: "SBO:0000247" - - !!omap - - id: "s_3994" - - name: "G10596" - - compartment: "er" - - formula: "C78H132N2O52P2R" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3994" + - name: "G10596" + - compartment: "er" + - formula: "C78H132N2O52P2R" + - charge: -2 + - annotation: !!omap - metanetx.chemical: "MNXM9265" - sbo: "SBO:0000247" - - !!omap - - id: "s_3995" - - name: "G10597" - - compartment: "er" - - formula: "C84H142N2O57P2R" - - charge: -2 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_3996" - - name: "G00007" - - compartment: "er" - - formula: "C90H152N2O62P2R" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_3995" + - name: "G10597" + - compartment: "er" + - formula: "C84H142N2O57P2R" + - charge: -2 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_3996" + - name: "G00007" + - compartment: "er" + - formula: "C90H152N2O62P2R" + - charge: -2 + - annotation: !!omap - kegg.compound: "C05868" - metanetx.chemical: "MNXM31425" - sbo: "SBO:0000247" - - !!omap - - id: "s_3997" - - name: "glycolate" - - compartment: "c" - - formula: "C2H3O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_3997" + - name: "glycolate" + - compartment: "c" + - formula: "C2H3O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "glyclt" - chebi: "CHEBI:29805" - kegg.compound: "C00160" - metanetx.chemical: "MNXM222" - sbo: "SBO:0000247" - - !!omap - - id: "s_3998" - - name: "sucrose" - - compartment: "c" - - formula: "C12H22O11" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3998" + - name: "sucrose" + - compartment: "c" + - formula: "C12H22O11" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "sucr" - chebi: "CHEBI:17992" - kegg.compound: "C00089" - metanetx.chemical: "MNXM167" - sbo: "SBO:0000247" - - !!omap - - id: "s_3999" - - name: "Isomaltose" - - compartment: "c" - - formula: "C12H22O11" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_3999" + - name: "Isomaltose" + - compartment: "c" + - formula: "C12H22O11" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "isomal" - chebi: "CHEBI:28189" - kegg.compound: "C00252" - metanetx.chemical: "MNXM58018" - sbo: "SBO:0000247" - - !!omap - - id: "s_4000" - - name: "Dextrin" - - compartment: "c" - - formula: "C12H20O10" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4000" + - name: "Dextrin" + - compartment: "c" + - formula: "C12H20O10" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "starch" - chebi: "CHEBI:28675" - kegg.compound: "C00721" - sbo: "SBO:0000247" - - !!omap - - id: "s_4001" - - name: "G10598" - - compartment: "er" - - formula: "C96H162N2O67P2R" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4001" + - name: "G10598" + - compartment: "er" + - formula: "C96H162N2O67P2R" + - charge: 0 + - annotation: !!omap - metanetx.chemical: "MNXM9336" - sbo: "SBO:0000247" - - !!omap - - id: "s_4002" - - name: "G00149" - - compartment: "er" - - formula: "" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4002" + - name: "G00149" + - compartment: "er" + - formula: "" + - charge: 0 + - annotation: !!omap - metanetx.chemical: "MNXM7903" - sbo: "SBO:0000247" - - !!omap - - id: "s_4003" - - name: "G00140" - - compartment: "er" - - formula: "" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4003" + - name: "G00140" + - compartment: "er" + - formula: "" + - charge: 0 + - annotation: !!omap - metanetx.chemical: "MNXM9266" - sbo: "SBO:0000247" - - !!omap - - id: "s_4004" - - name: "Sulfur donor" - - compartment: "m" - - formula: "" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4004" + - name: "Sulfur donor" + - compartment: "m" + - formula: "" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:80867" - kegg.compound: "C17023" - metanetx.chemical: "MNXM4111" - sbo: "SBO:0000247" - - !!omap - - id: "s_4005" - - name: "5'-Deoxyadenosine" - - compartment: "m" - - formula: "C10H13N5O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4005" + - name: "5'-Deoxyadenosine" + - compartment: "m" + - formula: "C10H13N5O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dad_5" - chebi: "CHEBI:17319" - kegg.compound: "C05198" - metanetx.chemical: "MNXM316" - sbo: "SBO:0000247" - - !!omap - - id: "s_4006" - - name: "S-sulfanyl-[L-cysteine desulfurase]" - - compartment: "m" - - formula: "" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_4007" - - name: "[disordered-form [Fe-S] cluster scaffold protein]" - - compartment: "m" - - formula: "" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_4008" - - name: "S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex" - - compartment: "m" - - formula: "" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_4009" - - name: "hydrogen cyanide" - - compartment: "m" - - formula: "CHN" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4006" + - name: "S-sulfanyl-[L-cysteine desulfurase]" + - compartment: "m" + - formula: "" + - charge: 0 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_4007" + - name: "[disordered-form [Fe-S] cluster scaffold protein]" + - compartment: "m" + - formula: "" + - charge: 0 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_4008" + - name: "S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex" + - compartment: "m" + - formula: "" + - charge: 0 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_4009" + - name: "hydrogen cyanide" + - compartment: "m" + - formula: "CHN" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "cyan" - chebi: "CHEBI:18407" - kegg.compound: "C01326" - metanetx.chemical: "MNXM254" - sbo: "SBO:0000247" - - !!omap - - id: "s_4010" - - name: "thiosulfate" - - compartment: "m" - - formula: "HO3S2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4010" + - name: "thiosulfate" + - compartment: "m" + - formula: "HO3S2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "tsul" - chebi: "CHEBI:33541" - kegg.compound: "C00320" - metanetx.chemical: "MNXM323" - sbo: "SBO:0000247" - - !!omap - - id: "s_4011" - - name: "sulphite" - - compartment: "m" - - formula: "O3S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4011" + - name: "sulphite" + - compartment: "m" + - formula: "O3S" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "so3" - chebi: "CHEBI:17359" - kegg.compound: "C11481" - metanetx.chemical: "MNXM105630" - sbo: "SBO:0000247" - - !!omap - - id: "s_4012" - - name: "thiocyanate" - - compartment: "m" - - formula: "CNS" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4012" + - name: "thiocyanate" + - compartment: "m" + - formula: "CNS" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "tcynt" - chebi: "CHEBI:29200" - kegg.compound: "C01755" - metanetx.chemical: "MNXM762" - sbo: "SBO:0000247" - - !!omap - - id: "s_4013" - - name: "Mg(2+)" - - compartment: "c" - - formula: "Mg" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_4013" + - name: "Mg(2+)" + - compartment: "c" + - formula: "Mg" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "mg2" - chebi: "CHEBI:18420" - kegg.compound: "C00305" - metanetx.chemical: "MNXM653" - sbo: "SBO:0000247" - - !!omap - - id: "s_4014" - - name: "Mg(2+)" - - compartment: "m" - - formula: "Mg" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_4014" + - name: "Mg(2+)" + - compartment: "m" + - formula: "Mg" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "mg2" - chebi: "CHEBI:18420" - kegg.compound: "C00305" - metanetx.chemical: "MNXM653" - sbo: "SBO:0000247" - - !!omap - - id: "s_4015" - - name: "UDP-D-glucose" - - compartment: "er" - - formula: "C15H22N2O17P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4015" + - name: "UDP-D-glucose" + - compartment: "er" + - formula: "C15H22N2O17P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "udpg" - chebi: "CHEBI:58367" - kegg.compound: "C00029" - metanetx.chemical: "MNXM722710" - sbo: "SBO:0000247" - - !!omap - - id: "s_4016" - - name: "sulphate" - - compartment: "er" - - formula: "O4S" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4016" + - name: "sulphate" + - compartment: "er" + - formula: "O4S" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "so4" - chebi: "CHEBI:16189" - kegg.compound: "C00059" - metanetx.chemical: "MNXM58" - sbo: "SBO:0000247" - - !!omap - - id: "s_4017" - - name: "N-Acetyl-D-glucosamine" - - compartment: "c" - - formula: "C8H15NO6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4017" + - name: "N-Acetyl-D-glucosamine" + - compartment: "c" + - formula: "C8H15NO6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "acgam" - chebi: "CHEBI:506227" - kegg.compound: "C00140" - metanetx.chemical: "MNXM143" - sbo: "SBO:0000247" - - !!omap - - id: "s_4018" - - name: "polyphosphate" - - compartment: "c" - - formula: "HO7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_4018" + - name: "polyphosphate" + - compartment: "c" + - formula: "HO7P2" + - charge: -3 + - annotation: !!omap - chebi: "CHEBI:16838" - kegg.compound: "C00404" - metanetx.chemical: "MNXM77738" - sbo: "SBO:0000247" - - !!omap - - id: "s_4019" - - name: "Cu2(+)" - - compartment: "c" - - formula: "Cu" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_4019" + - name: "Cu2(+)" + - compartment: "c" + - formula: "Cu" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "cu2" - chebi: "CHEBI:29036" - kegg.compound: "C00070" - metanetx.chemical: "MNXM632" - sbo: "SBO:0000247" - - !!omap - - id: "s_4020" - - name: "Cu2(+)" - - compartment: "g" - - formula: "Cu" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_4020" + - name: "Cu2(+)" + - compartment: "g" + - formula: "Cu" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "cu2" - chebi: "CHEBI:29036" - kegg.compound: "C00070" - metanetx.chemical: "MNXM632" - sbo: "SBO:0000247" - - !!omap - - id: "s_4021" - - name: "2-Oxoglutaramate" - - compartment: "c" - - formula: "C5H6NO4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4021" + - name: "2-Oxoglutaramate" + - compartment: "c" + - formula: "C5H6NO4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "HC00591" - chebi: "CHEBI:16769" - kegg.compound: "C00940" - metanetx.chemical: "MNXM575" - sbo: "SBO:0000247" - - !!omap - - id: "s_4022" - - name: "porphyrin" - - compartment: "m" - - formula: "C20H14N4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4022" + - name: "porphyrin" + - compartment: "m" + - formula: "C20H14N4" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:8337" - kegg.compound: "C05113" - metanetx.chemical: "MNXM2714" - sbo: "SBO:0000247" - - !!omap - - id: "s_4023" - - name: "porphyrin" - - compartment: "c" - - formula: "C20H14N4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4023" + - name: "porphyrin" + - compartment: "c" + - formula: "C20H14N4" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:8337" - kegg.compound: "C05113" - metanetx.chemical: "MNXM2714" - sbo: "SBO:0000247" - - !!omap - - id: "s_4024" - - name: "Starch" - - compartment: "c" - - formula: "C12H22O11" - - charge: 0 - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_4025" - - name: "UDP-N-acetyl-alpha-D-glucosamine" - - compartment: "g" - - formula: "C17H25N3O17P2" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4024" + - name: "Starch" + - compartment: "c" + - formula: "C12H22O11" + - charge: 0 + - annotation: !!omap + - sbo: "SBO:0000247" + - !!omap + - id: "s_4025" + - name: "UDP-N-acetyl-alpha-D-glucosamine" + - compartment: "g" + - formula: "C17H25N3O17P2" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "uacgam" - chebi: "CHEBI:57705" - kegg.compound: "C00043" - metanetx.chemical: "MNXM47" - sbo: "SBO:0000247" - - !!omap - - id: "s_4026" - - name: "Zn(2+)" - - compartment: "m" - - formula: "Zn" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_4026" + - name: "Zn(2+)" + - compartment: "m" + - formula: "Zn" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "zn2" - chebi: "CHEBI:29105" - kegg.compound: "C00038" - metanetx.chemical: "MNXM149" - sbo: "SBO:0000247" - - !!omap - - id: "s_4027" - - name: "Zn(2+)" - - compartment: "v" - - formula: "Zn" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_4027" + - name: "Zn(2+)" + - compartment: "v" + - formula: "Zn" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "zn2" - chebi: "CHEBI:29105" - kegg.compound: "C00038" - metanetx.chemical: "MNXM149" - sbo: "SBO:0000247" - - !!omap - - id: "s_4028" - - name: "RX" - - compartment: "m" - - formula: "RX" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4028" + - name: "RX" + - compartment: "m" + - formula: "RX" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:17792" - kegg.compound: "C01322" - metanetx.chemical: "MNXM6428" - sbo: "SBO:0000247" - - !!omap - - id: "s_4029" - - name: "HX" - - compartment: "m" - - formula: "X" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4029" + - name: "HX" + - compartment: "m" + - formula: "X" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:16042" - kegg.compound: "C00462" - metanetx.chemical: "MNXM55844" - sbo: "SBO:0000247" - - !!omap - - id: "s_4030" - - name: "R-S-glutathione" - - compartment: "m" - - formula: "C10H16N3O6SR" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4030" + - name: "R-S-glutathione" + - compartment: "m" + - formula: "C10H16N3O6SR" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:17021" - kegg.compound: "C02320" - metanetx.chemical: "MNXM3350" - sbo: "SBO:0000247" - - !!omap - - id: "s_4031" - - name: "iron(3+)" - - compartment: "v" - - formula: "Fe" - - charge: 3 - - annotation: !!omap + - !!omap + - id: "s_4031" + - name: "iron(3+)" + - compartment: "v" + - formula: "Fe" + - charge: 3 + - annotation: !!omap - bigg.metabolite: "fe3" - chebi: "CHEBI:29034" - kegg.compound: "C14819" - metanetx.chemical: "MNXM196" - sbo: "SBO:0000247" - - !!omap - - id: "s_4032" - - name: "[protein]-L-lysine" - - compartment: "c" - - formula: "C6H13N2O" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_4032" + - name: "[protein]-L-lysine" + - compartment: "c" + - formula: "C6H13N2O" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "pcollglys" - chebi: "CHEBI:29969" - kegg.compound: "C02188" - sbo: "SBO:0000247" - - !!omap - - id: "s_4033" - - name: "[protein]-N(6)-acetyl-L-lysine" - - compartment: "c" - - formula: "C8H14N2O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4033" + - name: "[protein]-N(6)-acetyl-L-lysine" + - compartment: "c" + - formula: "C8H14N2O2" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:61930" - sbo: "SBO:0000247" - - !!omap - - id: "s_4034" - - name: "Ala-Gln" - - compartment: "e" - - formula: "C8H15N3O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4034" + - name: "Ala-Gln" + - compartment: "e" + - formula: "C8H15N3O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ala_L_gln__L" - chebi: "CHEBI:73788" - metanetx.chemical: "MNXM40495" - sbo: "SBO:0000247" - - !!omap - - id: "s_4035" - - name: "Ala-Gln" - - compartment: "c" - - formula: "C8H15N3O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4035" + - name: "Ala-Gln" + - compartment: "c" + - formula: "C8H15N3O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ala_L_gln__L" - chebi: "CHEBI:73788" - metanetx.chemical: "MNXM40495" - sbo: "SBO:0000247" - - !!omap - - id: "s_4036" - - name: "Ala-Gln" - - compartment: "v" - - formula: "C8H15N3O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4036" + - name: "Ala-Gln" + - compartment: "v" + - formula: "C8H15N3O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ala_L_gln__L" - chebi: "CHEBI:73788" - metanetx.chemical: "MNXM40495" - sbo: "SBO:0000247" - - !!omap - - id: "s_4037" - - name: "Ala-Glu" - - compartment: "e" - - formula: "C8H13N2O5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4037" + - name: "Ala-Glu" + - compartment: "e" + - formula: "C8H13N2O5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "LalaLglu" - chebi: "CHEBI:61396" - kegg.compound: "C20958" - metanetx.chemical: "MNXM4026" - sbo: "SBO:0000247" - - !!omap - - id: "s_4038" - - name: "Ala-Glu" - - compartment: "c" - - formula: "C8H13N2O5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4038" + - name: "Ala-Glu" + - compartment: "c" + - formula: "C8H13N2O5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "LalaLglu" - chebi: "CHEBI:61396" - kegg.compound: "C20958" - metanetx.chemical: "MNXM4026" - sbo: "SBO:0000247" - - !!omap - - id: "s_4039" - - name: "Ala-Glu" - - compartment: "v" - - formula: "C8H13N2O5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4039" + - name: "Ala-Glu" + - compartment: "v" + - formula: "C8H13N2O5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "LalaLglu" - chebi: "CHEBI:61396" - kegg.compound: "C20958" - metanetx.chemical: "MNXM4026" - sbo: "SBO:0000247" - - !!omap - - id: "s_4040" - - name: "Ala-Thr" - - compartment: "e" - - formula: "C7H14N2O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4040" + - name: "Ala-Thr" + - compartment: "e" + - formula: "C7H14N2O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ala_L_Thr__L" - chebi: "CHEBI:73762" - metanetx.chemical: "MNXM40497" - sbo: "SBO:0000247" - - !!omap - - id: "s_4041" - - name: "Ala-Thr" - - compartment: "c" - - formula: "C7H14N2O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4041" + - name: "Ala-Thr" + - compartment: "c" + - formula: "C7H14N2O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ala_L_Thr__L" - chebi: "CHEBI:73762" - metanetx.chemical: "MNXM40497" - sbo: "SBO:0000247" - - !!omap - - id: "s_4042" - - name: "Ala-Thr" - - compartment: "v" - - formula: "C7H14N2O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4042" + - name: "Ala-Thr" + - compartment: "v" + - formula: "C7H14N2O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ala_L_Thr__L" - chebi: "CHEBI:73762" - metanetx.chemical: "MNXM40497" - sbo: "SBO:0000247" - - !!omap - - id: "s_4043" - - name: "L-threonine" - - compartment: "v" - - formula: "C4H9NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4043" + - name: "L-threonine" + - compartment: "v" + - formula: "C4H9NO3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "thr__L" - chebi: "CHEBI:16857" - kegg.compound: "C00188" - metanetx.chemical: "MNXM142" - sbo: "SBO:0000247" - - !!omap - - id: "s_4044" - - name: "thymidine 3'-monophosphate" - - compartment: "c" - - formula: "C10H13N2O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4044" + - name: "thymidine 3'-monophosphate" + - compartment: "c" + - formula: "C10H13N2O8P" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:77843" - metanetx.chemical: "MNXM87165" - sbo: "SBO:0000247" - - !!omap - - id: "s_4045" - - name: "thymidine 3'-monophosphate" - - compartment: "e" - - formula: "C10H13N2O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4045" + - name: "thymidine 3'-monophosphate" + - compartment: "e" + - formula: "C10H13N2O8P" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:77843" - metanetx.chemical: "MNXM87165" - sbo: "SBO:0000247" - - !!omap - - id: "s_4046" - - name: "thymidine 5'-monophosphate" - - compartment: "c" - - formula: "C10H13N2O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4046" + - name: "thymidine 5'-monophosphate" + - compartment: "c" + - formula: "C10H13N2O8P" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:15245" - 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compartment: "e" + - formula: "C6H14N4O5P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "argp" - chebi: "CHEBI:58477" - kegg.compound: "C05945" - metanetx.chemical: "MNXM3663" - sbo: "SBO:0000247" - - !!omap - - id: "s_4094" - - name: "2',3'-cyclic GMP" - - compartment: "c" - - formula: "C10H11N5O7P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4094" + - name: "2',3'-cyclic GMP" + - compartment: "c" + - formula: "C10H11N5O7P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "23cgmp" - chebi: "CHEBI:60837" - kegg.compound: "C06194" - metanetx.chemical: "MNXM3149" - sbo: "SBO:0000247" - - !!omap - - id: "s_4095" - - name: "2',3'-cyclic GMP" - - compartment: "e" - - formula: "C10H11N5O7P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4095" + - name: "2',3'-cyclic GMP" + - compartment: "e" + - formula: "C10H11N5O7P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "23cgmp" - chebi: "CHEBI:60837" - kegg.compound: "C06194" - metanetx.chemical: "MNXM3149" - sbo: "SBO:0000247" - - !!omap - - id: "s_4096" - - name: "O(4)-phospho-L-tyrosine" - - compartment: "c" - - formula: "C9H10NO6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4096" + - name: "O(4)-phospho-L-tyrosine" + - compartment: "c" + - formula: "C9H10NO6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "tyrp" - chebi: "CHEBI:62338" - kegg.compound: "C06501" - metanetx.chemical: "MNXM3323" - sbo: "SBO:0000247" - - !!omap - - id: "s_4097" - - name: "O(4)-phospho-L-tyrosine" - - compartment: "e" - - formula: "C9H10NO6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4097" + - name: "O(4)-phospho-L-tyrosine" + - compartment: "e" + - formula: "C9H10NO6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "tyrp" - chebi: "CHEBI:62338" - kegg.compound: "C06501" - metanetx.chemical: "MNXM3323" - sbo: "SBO:0000247" - - !!omap - - id: "s_4098" - - name: "triphosphate" - - compartment: "c" - - formula: "O10P3" - - charge: -5 - - annotation: !!omap + - !!omap + - id: "s_4098" + - name: "triphosphate" + - compartment: "c" + - formula: "O10P3" + - charge: -5 + - annotation: !!omap - bigg.metabolite: "pppi" - chebi: "CHEBI:18036" - kegg.compound: "C00536" - metanetx.chemical: "MNXM332" - sbo: "SBO:0000247" - - !!omap - - id: "s_4099" - - name: "triphosphate" - - compartment: "e" - - formula: "O10P3" - - charge: -5 - - annotation: !!omap + - !!omap + - id: "s_4099" + - name: "triphosphate" + - compartment: "e" + - formula: "O10P3" + - charge: -5 + - annotation: !!omap - bigg.metabolite: "pppi" - chebi: "CHEBI:18036" - kegg.compound: "C00536" - metanetx.chemical: "MNXM332" - sbo: "SBO:0000247" - - !!omap - - id: "s_4100" - - name: "cytidine 2'-phosphate" - - compartment: "c" - - formula: "C9H12N3O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4100" + - name: "cytidine 2'-phosphate" + - compartment: "c" + - formula: "C9H12N3O8P" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:77766" - kegg.compound: "C03104" - metanetx.chemical: "MNXM11237" - sbo: "SBO:0000247" - - !!omap - - id: "s_4101" - - name: "cytidine 2'-phosphate" - - compartment: "e" - - formula: "C9H12N3O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4101" + - name: "cytidine 2'-phosphate" + - compartment: "e" + - formula: "C9H12N3O8P" + - charge: -2 + - annotation: !!omap - chebi: "CHEBI:77766" - kegg.compound: "C03104" - metanetx.chemical: "MNXM11237" - sbo: "SBO:0000247" - - !!omap - - id: "s_4102" - - name: "2',3'-cyclic UMP" - - compartment: "c" - - formula: "C9H10N2O8P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4102" + - name: "2',3'-cyclic UMP" + - compartment: "c" + - formula: "C9H10N2O8P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "23cump" - chebi: "CHEBI:60873" - kegg.compound: "C02355" - metanetx.chemical: "MNXM3150" - sbo: "SBO:0000247" - - !!omap - - id: "s_4103" - - name: "2',3'-cyclic UMP" - - compartment: "e" - - formula: "C9H10N2O8P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4103" + - name: "2',3'-cyclic UMP" + - compartment: "e" + - formula: "C9H10N2O8P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "23cump" - chebi: "CHEBI:60873" - kegg.compound: "C02355" - metanetx.chemical: "MNXM3150" - sbo: "SBO:0000247" - - !!omap - - id: "s_4104" - - name: "3-sulfino-L-alanine" - - compartment: "c" - - formula: "C3H6NO4S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4104" + - name: "3-sulfino-L-alanine" + - compartment: "c" + - formula: "C3H6NO4S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3sala" - chebi: "CHEBI:61085" - kegg.compound: "C00606" - metanetx.chemical: "MNXM498" - sbo: "SBO:0000247" - - !!omap - - id: "s_4105" - - name: "3-sulfino-L-alanine" - - compartment: "e" - - formula: "C3H6NO4S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4105" + - name: "3-sulfino-L-alanine" + - compartment: "e" + - formula: "C3H6NO4S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3sala" - chebi: "CHEBI:61085" - kegg.compound: "C00606" - metanetx.chemical: "MNXM498" - sbo: "SBO:0000247" - - !!omap - - id: "s_4106" - - name: "3'-AMP" - - compartment: "c" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4106" + - name: "3'-AMP" + - compartment: "c" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "3amp" - chebi: "CHEBI:60880" - kegg.compound: "C01367" - metanetx.chemical: "MNXM1985" - sbo: "SBO:0000247" - - !!omap - - id: "s_4107" - - name: "3'-AMP" - - compartment: "e" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4107" + - name: "3'-AMP" + - compartment: "e" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "3amp" - chebi: "CHEBI:60880" - kegg.compound: "C01367" - metanetx.chemical: "MNXM1985" - sbo: "SBO:0000247" - - !!omap - - id: "s_4108" - - name: "6-O-alpha-D-glucopyranosyl-D-fructofuranose" - - compartment: "c" - - formula: "C12H22O11" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4108" + - name: "6-O-alpha-D-glucopyranosyl-D-fructofuranose" + - compartment: "c" + - formula: "C12H22O11" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pala" - chebi: "CHEBI:18394" - kegg.compound: "C01742" - metanetx.chemical: "MNXM3518" - sbo: "SBO:0000247" - - !!omap - - id: "s_4109" - - name: "6-O-alpha-D-glucopyranosyl-D-fructofuranose" - - compartment: "e" - - formula: "C12H22O11" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4109" + - name: "6-O-alpha-D-glucopyranosyl-D-fructofuranose" + - compartment: "e" + - formula: "C12H22O11" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "pala" - chebi: "CHEBI:18394" - kegg.compound: "C01742" - metanetx.chemical: "MNXM3518" - sbo: "SBO:0000247" - - !!omap - - id: "s_4110" - - name: "N-acetyl-L-cysteine" - - compartment: "c" - - formula: "C5H8NO3S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4110" + - name: "N-acetyl-L-cysteine" + - compartment: "c" + - formula: "C5H8NO3S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "CE1310" - chebi: "CHEBI:78236" - kegg.compound: "C06809" - metanetx.chemical: "MNXM98606" - sbo: "SBO:0000247" - - !!omap - - id: "s_4111" - - name: "N-acetyl-L-cysteine" - - compartment: "e" - - formula: "C5H8NO3S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4111" + - name: "N-acetyl-L-cysteine" + - compartment: "e" + - formula: "C5H8NO3S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "CE1310" - chebi: "CHEBI:78236" - kegg.compound: "C06809" - metanetx.chemical: "MNXM98606" - sbo: "SBO:0000247" - - !!omap - - id: "s_4112" - - name: "tetrathionate" - - compartment: "c" - - formula: "O6S4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4112" + - name: "tetrathionate" + - compartment: "c" + - formula: "O6S4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "tet" - chebi: "CHEBI:15226" - kegg.compound: "C02084" - metanetx.chemical: "MNXM1781" - sbo: "SBO:0000247" - - !!omap - - id: "s_4113" - - name: "thiosulfate" - - compartment: "c" - - formula: "HO3S2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4113" + - name: "thiosulfate" + - compartment: "c" + - formula: "HO3S2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "tsul" - chebi: "CHEBI:33542" - kegg.compound: "C00320" - metanetx.chemical: "MNXM323" - sbo: "SBO:0000247" - - !!omap - - id: "s_4114" - - name: "tetrathionate" - - compartment: "e" - - formula: "O6S4" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4114" + - name: "tetrathionate" + - compartment: "e" + - formula: "O6S4" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "tet" - chebi: "CHEBI:15226" - kegg.compound: "C02084" - metanetx.chemical: "MNXM1781" - sbo: "SBO:0000247" - - !!omap - - id: "s_4115" - - name: "2-hydroxyethane-1-sulfonate" - - compartment: "c" - - formula: "C2H5O4S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4115" + - name: "2-hydroxyethane-1-sulfonate" + - compartment: "c" + - formula: "C2H5O4S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "isetac" - chebi: "CHEBI:61904" - kegg.compound: "C05123" - metanetx.chemical: "MNXM1630" - sbo: "SBO:0000247" - - !!omap - - id: "s_4116" - - name: "2-hydroxyethane-1-sulfonate" - - compartment: "e" - - formula: "C2H5O4S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4116" + - name: "2-hydroxyethane-1-sulfonate" + - compartment: "e" + - formula: "C2H5O4S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "isetac" - chebi: "CHEBI:61904" - kegg.compound: "C05123" - metanetx.chemical: "MNXM1630" - sbo: "SBO:0000247" - - !!omap - - id: "s_4117" - - name: "5-dehydro-D-gluconate" - - compartment: "c" - - formula: "C6H9O7" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4117" + - name: "5-dehydro-D-gluconate" + - compartment: "c" + - formula: "C6H9O7" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "5dglcn" - chebi: "CHEBI:58143" - kegg.compound: "C01062" - metanetx.chemical: "MNXM963" - sbo: "SBO:0000247" - - !!omap - - id: "s_4118" - - name: "5-dehydro-D-gluconate" - - compartment: "e" - - formula: "C6H9O7" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4118" + - name: "5-dehydro-D-gluconate" + - compartment: "e" + - formula: "C6H9O7" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "5dglcn" - chebi: "CHEBI:58143" - kegg.compound: "C01062" - metanetx.chemical: "MNXM963" - sbo: "SBO:0000247" - - !!omap - - id: "s_4119" - - name: "Ala-Asp" - - compartment: "e" - - formula: "C7H11N2O5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4119" + - name: "Ala-Asp" + - compartment: "e" + - formula: "C7H11N2O5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ala_L_asp__L" - chebi: "CHEBI:74363" - metanetx.chemical: "MNXM40494" - sbo: "SBO:0000247" - - !!omap - - id: "s_4120" - - name: "Ala-Asp" - - compartment: "c" - - formula: "C7H11N2O5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4120" + - name: "Ala-Asp" + - compartment: "c" + - formula: "C7H11N2O5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ala_L_asp__L" - chebi: "CHEBI:74363" - metanetx.chemical: "MNXM40494" - sbo: "SBO:0000247" - - !!omap - - id: "s_4121" - - name: "Ala-Asp" - - compartment: "v" - - formula: "C7H11N2O5" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4121" + - name: "Ala-Asp" + - compartment: "v" + - formula: "C7H11N2O5" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ala_L_asp__L" - chebi: "CHEBI:74363" - metanetx.chemical: "MNXM40494" - sbo: "SBO:0000247" - - !!omap - - id: "s_4122" - - name: "methyl alpha-D-glucopyranoside" - - compartment: "c" - - formula: "C7H14O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4122" + - name: "methyl alpha-D-glucopyranoside" + - compartment: "c" + - formula: "C7H14O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "madg" - chebi: "CHEBI:320061" - metanetx.chemical: "MNXM724960" - sbo: "SBO:0000247" - - !!omap - - id: "s_4123" - - name: "methanol" - - compartment: "c" - - formula: "CH4O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4123" + - name: "methanol" + - compartment: "c" + - formula: "CH4O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "meoh" - chebi: "CHEBI:17790" - kegg.compound: "C00132" - metanetx.chemical: "MNXM157" - sbo: "SBO:0000247" - - !!omap - - id: "s_4124" - - name: "methanol" - - compartment: "e" - - formula: "CH4O" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4124" + - name: "methanol" + - compartment: "e" + - formula: "CH4O" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "meoh" - chebi: "CHEBI:17790" - kegg.compound: "C00132" - metanetx.chemical: "MNXM157" - sbo: "SBO:0000247" - - !!omap - - id: "s_4125" - - name: "methyl alpha-D-glucopyranoside" - - compartment: "e" - - formula: "C7H14O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4125" + - name: "methyl alpha-D-glucopyranoside" + - compartment: "e" + - formula: "C7H14O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "madg" - chebi: "CHEBI:320061" - metanetx.chemical: "MNXM724960" - sbo: "SBO:0000247" - - !!omap - - id: "s_4126" - - name: "2',3'-cyclic CMP" - - compartment: "c" - - formula: "C9H11N3O7P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4126" + - name: "2',3'-cyclic CMP" + - compartment: "c" + - formula: "C9H11N3O7P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "23ccmp" - chebi: "CHEBI:60877" - kegg.compound: "C02354" - metanetx.chemical: "MNXM3148" - sbo: "SBO:0000247" - - !!omap - - id: "s_4127" - - name: "2',3'-cyclic CMP" - - compartment: "e" - - formula: "C9H11N3O7P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4127" + - name: "2',3'-cyclic CMP" + - compartment: "e" + - formula: "C9H11N3O7P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "23ccmp" - chebi: "CHEBI:60877" - kegg.compound: "C02354" - metanetx.chemical: "MNXM3148" - sbo: "SBO:0000247" - - !!omap - - id: "s_4128" - - name: "D-tagatose" - - compartment: "c" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4128" + - name: "D-tagatose" + - compartment: "c" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "tag__D" - chebi: "CHEBI:4249" - kegg.compound: "C00795" - metanetx.chemical: "MNXM92401" - sbo: "SBO:0000247" - - !!omap - - id: "s_4129" - - name: "D-tagatofuranose 6-phosphate" - - compartment: "c" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4129" + - name: "D-tagatofuranose 6-phosphate" + - compartment: "c" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "tag6p__D" - chebi: "CHEBI:58695" - kegg.compound: "C01097" - metanetx.chemical: "MNXM795" - sbo: "SBO:0000247" - - !!omap - - id: "s_4130" - - name: "D-tagatose" - - compartment: "e" - - formula: "C6H12O6" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4130" + - name: "D-tagatose" + - compartment: "e" + - formula: "C6H12O6" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "tag__D" - chebi: "CHEBI:4249" - kegg.compound: "C00795" - metanetx.chemical: "MNXM92401" - sbo: "SBO:0000247" - - !!omap - - id: "s_4131" - - name: "turanose" - - compartment: "e" - - formula: "C12H22O11" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4131" + - name: "turanose" + - compartment: "e" + - formula: "C12H22O11" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:32528" - kegg.compound: "C19636" - metanetx.chemical: "MNXM161984" - sbo: "SBO:0000247" - - !!omap - - id: "s_4132" - - name: "acetoacetate" - - compartment: "c" - - formula: "C4H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4132" + - name: "acetoacetate" + - compartment: "c" + - formula: "C4H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "acac" - chebi: "CHEBI:13705" - kegg.compound: "C00164" - metanetx.chemical: "MNXM154" - sbo: "SBO:0000247" - - !!omap - - id: "s_4133" - - name: "acetoacetate" - - compartment: "e" - - formula: "C4H5O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4133" + - name: "acetoacetate" + - compartment: "e" + - formula: "C4H5O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "acac" - chebi: "CHEBI:13705" - kegg.compound: "C00164" - metanetx.chemical: "MNXM154" - sbo: "SBO:0000247" - - !!omap - - id: "s_4134" - - name: "N(alpha)-acetyl-L-methionine" - - compartment: "c" - - formula: "C7H12NO3S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4134" + - name: "N(alpha)-acetyl-L-methionine" + - compartment: "c" + - formula: "C7H12NO3S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "C02712" - chebi: "CHEBI:132957" - kegg.compound: "C02712" - metanetx.chemical: "MNXM7576" - sbo: "SBO:0000247" - - !!omap - - id: "s_4135" - - name: "N(alpha)-acetyl-L-methionine" - - compartment: "e" - - formula: "C7H12NO3S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4135" + - name: "N(alpha)-acetyl-L-methionine" + - compartment: "e" + - formula: "C7H12NO3S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "C02712" - chebi: "CHEBI:132957" - kegg.compound: "C02712" - metanetx.chemical: "MNXM7576" - sbo: "SBO:0000247" - - !!omap - - id: "s_4136" - - name: "3-oxalomalate(3-)" - - compartment: "c" - - formula: "C6H3O8" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_4136" + - name: "3-oxalomalate(3-)" + - compartment: "c" + - formula: "C6H3O8" + - charge: -3 + - annotation: !!omap - chebi: "CHEBI:15593" - kegg.compound: "C01990" - metanetx.chemical: "MNXM3850" - sbo: "SBO:0000247" - - !!omap - - id: "s_4137" - - name: "3-oxalomalate(3-)" - - compartment: "e" - - formula: "C6H3O8" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_4137" + - name: "3-oxalomalate(3-)" + - compartment: "e" + - formula: "C6H3O8" + - charge: -3 + - annotation: !!omap - chebi: "CHEBI:15593" - kegg.compound: "C01990" - metanetx.chemical: "MNXM3850" - sbo: "SBO:0000247" - - !!omap - - id: "s_4138" - - name: "L-cysteate" - - compartment: "c" - - formula: "C3H6NO5S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4138" + - name: "L-cysteate" + - compartment: "c" + - formula: "C3H6NO5S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "Lcyst" - chebi: "CHEBI:58090" - kegg.compound: "C00506" - metanetx.chemical: "MNXM713" - sbo: "SBO:0000247" - - !!omap - - id: "s_4139" - - name: "L-cysteate" - - compartment: "e" - - formula: "C3H6NO5S" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4139" + - name: "L-cysteate" + - compartment: "e" + - formula: "C3H6NO5S" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "Lcyst" - chebi: "CHEBI:58090" - kegg.compound: "C00506" - metanetx.chemical: "MNXM713" - sbo: "SBO:0000247" - - !!omap - - id: "s_4140" - - name: "alpha-maltotriose" - - compartment: "e" - - formula: "C18H32O16" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4140" + - name: "alpha-maltotriose" + - compartment: "e" + - formula: "C18H32O16" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "malttr" - chebi: "CHEBI:61993" - kegg.compound: "C01835" - metanetx.chemical: "MNXM468" - sbo: "SBO:0000247" - - !!omap - - id: "s_4141" - - name: "2-phospho-D-glyceric acid" - - compartment: "e" - - formula: "C3H4O7P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_4141" + - name: "2-phospho-D-glyceric acid" + - compartment: "e" + - formula: "C3H4O7P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "2pg" - chebi: "CHEBI:58289" - kegg.compound: "C00631" - metanetx.chemical: "MNXM275" - sbo: "SBO:0000247" - - !!omap - - id: "s_4142" - - name: "3-phosphonato-D-glycerate(3-)" - - compartment: "e" - - formula: "C3H4O7P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_4142" + - name: "3-phosphonato-D-glycerate(3-)" + - compartment: "e" + - formula: "C3H4O7P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "3pg" - chebi: "CHEBI:58272" - kegg.compound: "C00197" - metanetx.chemical: "MNXM126" - sbo: "SBO:0000247" - - !!omap - - id: "s_4143" - - name: "Met-Ala" - - compartment: "e" - - formula: "C8H16N2O3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4143" + - name: "Met-Ala" + - compartment: "e" + - formula: "C8H16N2O3S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "met_L_ala__L" - chebi: "CHEBI:73610" - metanetx.chemical: "MNXM61647" - sbo: "SBO:0000247" - - !!omap - - id: "s_4144" - - name: "Met-Ala" - - compartment: "c" - - formula: "C8H16N2O3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4144" + - name: "Met-Ala" + - compartment: "c" + - formula: "C8H16N2O3S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "met_L_ala__L" - chebi: "CHEBI:73610" - metanetx.chemical: "MNXM61647" - sbo: "SBO:0000247" - - !!omap - - id: "s_4145" - - name: "D-glucose 1-phosphate" - - compartment: "e" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4145" + - name: "D-glucose 1-phosphate" + - compartment: "e" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "g1p" - chebi: "CHEBI:57629" - kegg.compound: "C00103" - metanetx.chemical: "MNXM89588" - sbo: "SBO:0000247" - - !!omap - - id: "s_4146" - - name: "carbamoyl phosphate" - - compartment: "e" - - formula: "CH2NO5P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4146" + - name: "carbamoyl phosphate" + - compartment: "e" + - formula: "CH2NO5P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "cbp" - chebi: "CHEBI:58228" - kegg.compound: "C00169" - metanetx.chemical: "MNXM138" - sbo: "SBO:0000247" - - !!omap - - id: "s_4147" - - name: "3-phospho-serine" - - compartment: "e" - - formula: "C3H6NO6P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4147" + - name: "3-phospho-serine" + - compartment: "e" + - formula: "C3H6NO6P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "pser__L" - chebi: "CHEBI:57524" - kegg.compound: "C01005" - metanetx.chemical: "MNXM379" - sbo: "SBO:0000247" - - !!omap - - id: "s_4148" - - name: "GMP" - - compartment: "e" - - formula: "C10H12N5O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4148" + - name: "GMP" + - compartment: "e" + - formula: "C10H12N5O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "gmp" - chebi: "CHEBI:58115" - kegg.compound: "C00144" - metanetx.chemical: "MNXM113" - sbo: "SBO:0000247" - - !!omap - - id: "s_4149" - - name: "myo-inositol hexakisphosphate" - - compartment: "e" - - formula: "C6H6O24P6" - - charge: -12 - - annotation: !!omap + - !!omap + - id: "s_4149" + - name: "myo-inositol hexakisphosphate" + - compartment: "e" + - formula: "C6H6O24P6" + - charge: -12 + - annotation: !!omap - bigg.metabolite: "minohp" - chebi: "CHEBI:58130" - kegg.compound: "C01204" - metanetx.chemical: "MNXM491" - sbo: "SBO:0000247" - - !!omap - - id: "s_4150" - - name: "D-glucose 6-phosphate" - - compartment: "e" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4150" + - name: "D-glucose 6-phosphate" + - compartment: "e" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "g6p" - chebi: "CHEBI:61548" - kegg.compound: "C00092" - metanetx.chemical: "MNXM160" - sbo: "SBO:0000247" - - !!omap - - id: "s_4151" - - name: "UMP" - - compartment: "e" - - formula: "C9H11N2O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4151" + - name: "UMP" + - compartment: "e" + - formula: "C9H11N2O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "ump" - chebi: "CHEBI:57865" - kegg.compound: "C00105" - metanetx.chemical: "MNXM80" - sbo: "SBO:0000247" - - !!omap - - id: "s_4152" - - name: "phosphoenolpyruvate" - - compartment: "e" - - formula: "C3H2O6P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_4152" + - name: "phosphoenolpyruvate" + - compartment: "e" + - formula: "C3H2O6P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "pep" - chebi: "CHEBI:58702" - kegg.compound: "C00074" - metanetx.chemical: "MNXM73" - sbo: "SBO:0000247" - - !!omap - - id: "s_4153" - - name: "D-mannose 6-phosphate" - - compartment: "e" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4153" + - name: "D-mannose 6-phosphate" + - compartment: "e" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "man6p" - chebi: "CHEBI:58735" - kegg.compound: "C00275" - metanetx.chemical: "MNXM427" - sbo: "SBO:0000247" - - !!omap - - id: "s_4154" - - name: "O-phosphoethanolamine" - - compartment: "e" - - formula: "C2H7NO4P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4154" + - name: "O-phosphoethanolamine" + - compartment: "e" + - formula: "C2H7NO4P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "ethamp" - chebi: "CHEBI:58190" - kegg.compound: "C00346" - metanetx.chemical: "MNXM187" - sbo: "SBO:0000247" - - !!omap - - id: "s_4155" - - name: "6-phospho-D-gluconate" - - compartment: "e" - - formula: "C6H10O10P" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_4155" + - name: "6-phospho-D-gluconate" + - compartment: "e" + - formula: "C6H10O10P" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "6pgc" - chebi: "CHEBI:58759" - kegg.compound: "C00345" - metanetx.chemical: "MNXM325" - sbo: "SBO:0000247" - - !!omap - - id: "s_4156" - - name: "D-mannose 1-phosphate" - - compartment: "e" - - formula: "C6H11O9P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4156" + - name: "D-mannose 1-phosphate" + - compartment: "e" + - formula: "C6H11O9P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "man1p" - chebi: "CHEBI:58409" - kegg.compound: "C00636" - metanetx.chemical: "MNXM721" - sbo: "SBO:0000247" - - !!omap - - id: "s_4157" - - name: "diphosphate" - - compartment: "e" - - formula: "HO7P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_4157" + - name: "diphosphate" + - compartment: "e" + - formula: "HO7P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "ppi" - chebi: "CHEBI:33019" - kegg.compound: "C00013" - metanetx.chemical: "MNXM11" - sbo: "SBO:0000247" - - !!omap - - id: "s_4158" - - name: "choline phosphate" - - compartment: "e" - - formula: "C5H13NO4P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4158" + - name: "choline phosphate" + - compartment: "e" + - formula: "C5H13NO4P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "cholp" - chebi: "CHEBI:295975" - kegg.compound: "C00588" - metanetx.chemical: "MNXM229" - sbo: "SBO:0000247" - - !!omap - - id: "s_4159" - - name: "thiosulfate" - - compartment: "e" - - formula: "HO3S2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4159" + - name: "thiosulfate" + - compartment: "e" + - formula: "HO3S2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "tsul" - chebi: "CHEBI:33542" - kegg.compound: "C00320" - metanetx.chemical: "MNXM323" - sbo: "SBO:0000247" - - !!omap - - id: "s_4160" - - name: "AMP" - - compartment: "e" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4160" + - name: "AMP" + - compartment: "e" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "amp" - chebi: "CHEBI:456215" - kegg.compound: "C00020" - metanetx.chemical: "MNXM14" - sbo: "SBO:0000247" - - !!omap - - id: "s_4161" - - name: "2',3'-cyclic AMP" - - compartment: "e" - - formula: "C10H11N5O6P" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4161" + - name: "2',3'-cyclic AMP" + - compartment: "e" + - formula: "C10H11N5O6P" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "23camp" - chebi: "CHEBI:60879" - kegg.compound: "C02353" - metanetx.chemical: "MNXM2598" - sbo: "SBO:0000247" - - !!omap - - id: "s_4162" - - name: "adenosine 2'-phosphate" - - compartment: "e" - - formula: "C10H12N5O7P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4162" + - name: "adenosine 2'-phosphate" + - compartment: "e" + - formula: "C10H12N5O7P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "amp2p" - chebi: "CHEBI:77740" - kegg.compound: "C00946" - metanetx.chemical: "MNXM7028" - sbo: "SBO:0000247" - - !!omap - - id: "s_4163" - - name: "CMP" - - compartment: "e" - - formula: "C9H12N3O8P" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4163" + - name: "CMP" + - compartment: "e" + - formula: "C9H12N3O8P" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "cmp" - chebi: "CHEBI:60377" - kegg.compound: "C00055" - metanetx.chemical: "MNXM31" - sbo: "SBO:0000247" - - !!omap - - id: "s_4164" - - name: "D-Glucosamine" - - compartment: "e" - - formula: "C6H14NO5" - - charge: 1 - - annotation: !!omap + - !!omap + - id: "s_4164" + - name: "D-Glucosamine" + - compartment: "e" + - formula: "C6H14NO5" + - charge: 1 + - annotation: !!omap - bigg.metabolite: "gam" - chebi: "CHEBI:58723" - kegg.compound: "C00329" - metanetx.chemical: "MNXM533" - sbo: "SBO:0000247" - - !!omap - - id: "s_4165" - - name: "2-deoxy-D-ribose" - - compartment: "e" - - formula: "C5H10O4" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4165" + - name: "2-deoxy-D-ribose" + - compartment: "e" + - formula: "C5H10O4" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "drib" - chebi: "CHEBI:28816" - kegg.compound: "C08347" - metanetx.chemical: "MNXM2474" - sbo: "SBO:0000247" - - !!omap - - id: "s_4166" - - name: "L-citrulline" - - compartment: "e" - - formula: "C6H13N3O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4166" + - name: "L-citrulline" + - compartment: "e" + - formula: "C6H13N3O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "citr__L" - chebi: "CHEBI:16349" - kegg.compound: "C00327" - metanetx.chemical: "MNXM211" - sbo: "SBO:0000247" - - !!omap - - id: "s_4167" - - name: "glycerone" - - compartment: "e" - - formula: "C3H6O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4167" + - name: "glycerone" + - compartment: "e" + - formula: "C3H6O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "dha" - chebi: "CHEBI:16016" - kegg.compound: "C00184" - metanetx.chemical: "MNXM460" - sbo: "SBO:0000247" - - !!omap - - id: "s_4168" - - name: "Ala-Leu" - - compartment: "e" - - formula: "C9H18N2O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4168" + - name: "Ala-Leu" + - compartment: "e" + - formula: "C9H18N2O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ala_L_ile__L" - chebi: "CHEBI:73770" - metanetx.chemical: "MNXM15786" - sbo: "SBO:0000247" - - !!omap - - id: "s_4169" - - name: "Ala-Leu" - - compartment: "c" - - formula: "C9H18N2O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4169" + - name: "Ala-Leu" + - compartment: "c" + - formula: "C9H18N2O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "ala_L_ile__L" - chebi: "CHEBI:73770" - metanetx.chemical: "MNXM15786" - sbo: "SBO:0000247" - - !!omap - - id: "s_4170" - - name: "Ala-Gly" - - compartment: "e" - - formula: "C5H10N2O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4170" + - name: "Ala-Gly" + - compartment: "e" + - formula: "C5H10N2O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "L_alagly" - chebi: "CHEBI:73757" - metanetx.chemical: "MNXM15783" - sbo: "SBO:0000247" - - !!omap - - id: "s_4171" - - name: "Ala-Gly" - - compartment: "c" - - formula: "C5H10N2O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4171" + - name: "Ala-Gly" + - compartment: "c" + - formula: "C5H10N2O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "L_alagly" - chebi: "CHEBI:73757" - metanetx.chemical: "MNXM15783" - sbo: "SBO:0000247" - - !!omap - - id: "s_4172" - - name: "N-acetyl-L-glutamate" - - compartment: "e" - - formula: "C7H9NO5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4172" + - name: "N-acetyl-L-glutamate" + - compartment: "e" + - formula: "C7H9NO5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "acglu" - chebi: "CHEBI:44337" - kegg.compound: "C00624" - metanetx.chemical: "MNXM730" - sbo: "SBO:0000247" - - !!omap - - id: "s_4173" - - name: "N-acetyl-L-glutamate" - - compartment: "c" - - formula: "C7H9NO5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4173" + - name: "N-acetyl-L-glutamate" + - compartment: "c" + - formula: "C7H9NO5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "acglu" - chebi: "CHEBI:44337" - kegg.compound: "C00624" - metanetx.chemical: "MNXM730" - sbo: "SBO:0000247" - - !!omap - - id: "s_4174" - - name: "lipoamide" - - compartment: "e" - - formula: "C8H15NOS2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4174" + - name: "lipoamide" + - compartment: "e" + - formula: "C8H15NOS2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "lpam" - chebi: "CHEBI:17460" - kegg.compound: "C00248" - metanetx.chemical: "MNXM1024" - sbo: "SBO:0000247" - - !!omap - - id: "s_4175" - - name: "lipoamide" - - compartment: "c" - - formula: "C8H15NOS2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4175" + - name: "lipoamide" + - compartment: "c" + - formula: "C8H15NOS2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "lpam" - chebi: "CHEBI:17460" - kegg.compound: "C00248" - metanetx.chemical: "MNXM1024" - sbo: "SBO:0000247" - - !!omap - - id: "s_4176" - - name: "L-Methionine S-oxide" - - compartment: "e" - - formula: "C5H11NO3S" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4176" + - name: "L-Methionine S-oxide" + - compartment: "e" + - formula: "C5H11NO3S" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "metsox_S__L" - chebi: "CHEBI:17016" - kegg.compound: "C02989" - metanetx.chemical: "MNXM2246" - sbo: "SBO:0000247" - - !!omap - - id: "s_4177" - - name: "homogentisate" - - compartment: "c" - - formula: "C8H7O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4177" + - name: "homogentisate" + - compartment: "c" + - formula: "C8H7O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "hgentis" - chebi: "CHEBI:16169" - kegg.compound: "C00544" - metanetx.chemical: "MNXM345" - sbo: "SBO:0000247" - - !!omap - - id: "s_4178" - - name: "4-maleylacetoacetate" - - compartment: "c" - - formula: "C8H6O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4178" + - name: "4-maleylacetoacetate" + - compartment: "c" + - formula: "C8H6O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "4mlacac" - chebi: "CHEBI:17105" - kegg.compound: "C01036" - metanetx.chemical: "MNXM691" - sbo: "SBO:0000247" - - !!omap - - id: "s_4179" - - name: "4-fumarylacetoacetate" - - compartment: "c" - - formula: "C8H6O6" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4179" + - name: "4-fumarylacetoacetate" + - compartment: "c" + - formula: "C8H6O6" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "4fumacac" - chebi: "CHEBI:18034" - kegg.compound: "C01061" - metanetx.chemical: "MNXM708" - sbo: "SBO:0000247" - - !!omap - - id: "s_4180" - - name: "L-xylulose" - - compartment: "c" - - formula: "C5H10O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4180" + - name: "L-xylulose" + - compartment: "c" + - formula: "C5H10O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "xylu__L" - chebi: "CHEBI:17140" - kegg.compound: "C00312" - metanetx.chemical: "MNXM597" - sbo: "SBO:0000247" - - !!omap - - id: "s_4181" - - name: "D-arabinitol" - - compartment: "c" - - formula: "C5H12O5" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4181" + - name: "D-arabinitol" + - compartment: "c" + - formula: "C5H12O5" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "abt__D" - chebi: "CHEBI:18333" - kegg.compound: "C01904" - metanetx.chemical: "MNXM1018" - sbo: "SBO:0000247" - - !!omap - - id: "s_4182" - - name: "2-hydroxyglutarate" - - compartment: "c" - - formula: "C5H6O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4182" + - name: "2-hydroxyglutarate" + - compartment: "c" + - formula: "C5H6O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "2hog" - chebi: "CHEBI:11596" - kegg.compound: "C02630" - metanetx.chemical: "MNXM1210" - sbo: "SBO:0000247" - - !!omap - - id: "s_4183" - - name: "propionyl-CoA" - - compartment: "c" - - formula: "C24H36N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_4183" + - name: "propionyl-CoA" + - compartment: "c" + - formula: "C24H36N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "ppcoa" - chebi: "CHEBI:57392" - kegg.compound: "C00100" - metanetx.chemical: "MNXM86" - sbo: "SBO:0000247" - - !!omap - - id: "s_4184" - - name: "3-oxopropanoate" - - compartment: "c" - - formula: "C3H3O3" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4184" + - name: "3-oxopropanoate" + - compartment: "c" + - formula: "C3H3O3" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "msa" - chebi: "CHEBI:33190" - kegg.compound: "C00222" - metanetx.chemical: "MNXM244" - sbo: "SBO:0000247" - - !!omap - - id: "s_4185" - - name: "(R)-2,3-dihydroxy-3-methylbutanoate" - - compartment: "c" - - formula: "C5H9O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4185" + - name: "(R)-2,3-dihydroxy-3-methylbutanoate" + - compartment: "c" + - formula: "C5H9O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "23dhmb" - chebi: "CHEBI:49072" - kegg.compound: "C04272" - metanetx.chemical: "MNXM114097" - sbo: "SBO:0000247" - - !!omap - - id: "s_4186" - - name: "3-hydroxy-3-methyl-2-oxobutanoate" - - compartment: "c" - - formula: "C5H7O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4186" + - name: "3-hydroxy-3-methyl-2-oxobutanoate" + - compartment: "c" + - formula: "C5H7O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "3hmoa" - chebi: "CHEBI:11812" - kegg.compound: "C04181" - metanetx.chemical: "MNXM1638" - sbo: "SBO:0000247" - - !!omap - - id: "s_4187" - - name: "2-acetyllactic acid" - - compartment: "c" - - formula: "C5H7O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4187" + - name: "2-acetyllactic acid" + - compartment: "c" + - formula: "C5H7O4" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:57774" - kegg.compound: "C00900" - metanetx.chemical: "MNXM426" - sbo: "SBO:0000247" - - !!omap - - id: "s_4188" - - name: "(2S)-2-acetolactate" - - compartment: "c" - - formula: "C5H7O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4188" + - name: "(2S)-2-acetolactate" + - compartment: "c" + - formula: "C5H7O4" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "alac__S" - chebi: "CHEBI:58476" - kegg.compound: "C06010" - metanetx.chemical: "MNXM114079" - sbo: "SBO:0000247" - - !!omap - - id: "s_4189" - - name: "(2R,3S)-3-methylmalate" - - compartment: "c" - - formula: "C5H6O5" - - charge: -2 - - annotation: !!omap + - !!omap + - id: "s_4189" + - name: "(2R,3S)-3-methylmalate" + - compartment: "c" + - formula: "C5H6O5" + - charge: -2 + - annotation: !!omap - bigg.metabolite: "r3mmal" - chebi: "CHEBI:58511" - kegg.compound: "C06032" - metanetx.chemical: "MNXM2512" - sbo: "SBO:0000247" - - !!omap - - id: "s_4190" - - name: "trans-2,cis-9-octadecadienoyl-CoA" - - compartment: "c" - - formula: "C39H62N7O17P3S" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_4190" + - name: "trans-2,cis-9-octadecadienoyl-CoA" + - compartment: "c" + - formula: "C39H62N7O17P3S" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "lnlccoa" - chebi: "CHEBI:57383" - kegg.compound: "C02050" - metanetx.chemical: "MNXM638" - sbo: "SBO:0000247" - - !!omap - - id: "s_4191" - - name: "(9Z,12Z)-octadecadienoate" - - compartment: "c" - - formula: "C18H31O2" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4191" + - name: "(9Z,12Z)-octadecadienoate" + - compartment: "c" + - formula: "C18H31O2" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "lnlc" - chebi: "CHEBI:30245" - kegg.compound: "C01595" - metanetx.chemical: "MNXM293" - sbo: "SBO:0000247" - - !!omap - - id: "s_4192" - - name: "stachyose" - - compartment: "c" - - formula: "C24H42O21" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4192" + - name: "stachyose" + - compartment: "c" + - formula: "C24H42O21" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "stys" - chebi: "CHEBI:17164" - kegg.compound: "C01613" - metanetx.chemical: "MNXM1503" - sbo: "SBO:0000247" - - !!omap - - id: "s_4193" - - name: "raffinose" - - compartment: "c" - - formula: "C18H32O16" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4193" + - name: "raffinose" + - compartment: "c" + - formula: "C18H32O16" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "raffin" - chebi: "CHEBI:16634" - kegg.compound: "C00492" - metanetx.chemical: "MNXM621" - sbo: "SBO:0000247" - - !!omap - - id: "s_4194" - - name: "4-hydroxyphenyl acetate" - - compartment: "c" - - formula: "C8H8O3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4194" + - name: "4-hydroxyphenyl acetate" + - compartment: "c" + - formula: "C8H8O3" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "4hphac" - chebi: "CHEBI:18101" - kegg.compound: "C00642" - metanetx.chemical: "MNXM3863" - sbo: "SBO:0000247" - - !!omap - - id: "s_4195" - - name: "Hydroquinone" - - compartment: "c" - - formula: "C6H6O2" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4195" + - name: "Hydroquinone" + - compartment: "c" + - formula: "C6H6O2" + - charge: 0 + - annotation: !!omap - bigg.metabolite: "hqn" - chebi: "CHEBI:17594" - kegg.compound: "C00530" - metanetx.chemical: "MNXM376" - sbo: "SBO:0000247" - - !!omap - - id: "s_4196" - - name: "ATP" - - compartment: "g" - - formula: "C10H12N5O13P3" - - charge: -4 - - annotation: !!omap + - !!omap + - id: "s_4196" + - name: "ATP" + - compartment: "g" + - formula: "C10H12N5O13P3" + - charge: -4 + - annotation: !!omap - bigg.metabolite: "atp" - chebi: "CHEBI:30616" - kegg.compound: "C00002" - metanetx.chemical: "MNXM3" - sbo: "SBO:0000247" - - !!omap - - id: "s_4197" - - name: "Ca(2+)" - - compartment: "g" - - formula: "Ca" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_4197" + - name: "Ca(2+)" + - compartment: "g" + - formula: "Ca" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "ca2" - chebi: "CHEBI:29108" - kegg.compound: "C00076" - metanetx.chemical: "MNXM128" - sbo: "SBO:0000247" - - !!omap - - id: "s_4198" - - name: "ADP" - - compartment: "g" - - formula: "C10H12N5O10P2" - - charge: -3 - - annotation: !!omap + - !!omap + - id: "s_4198" + - name: "ADP" + - compartment: "g" + - formula: "C10H12N5O10P2" + - charge: -3 + - annotation: !!omap - bigg.metabolite: "adp" - chebi: "CHEBI:456216" - kegg.compound: "C00008" - metanetx.chemical: "MNXM7" - sbo: "SBO:0000247" - - !!omap - - id: "s_4199" - - name: "Ca(2+)" - - compartment: "e" - - formula: "Ca" - - charge: 2 - - annotation: !!omap + - !!omap + - id: "s_4199" + - name: "Ca(2+)" + - compartment: "e" + - formula: "Ca" + - charge: 2 + - annotation: !!omap - bigg.metabolite: "ca2" - chebi: "CHEBI:29108" - kegg.compound: "C00076" - metanetx.chemical: "MNXM128" - sbo: "SBO:0000247" - - !!omap - - id: "s_4200" - - name: "chloride" - - compartment: "e" - - formula: "Cl" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4200" + - name: "chloride" + - compartment: "e" + - formula: "Cl" + - charge: -1 + - annotation: !!omap - bigg.metabolite: "cl" - chebi: "CHEBI:17996" - kegg.compound: "C00698" - metanetx.chemical: "MNXM43" - sbo: "SBO:0000247" - 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- compartment: "c" - - formula: "C5H9NO3" - - charge: 0 - - annotation: !!omap + - !!omap + - id: "s_4207" + - name: "trans-4-hydroxy-L-proline" + - compartment: "c" + - formula: "C5H9NO3" + - charge: 0 + - annotation: !!omap - chebi: "CHEBI:18072" - kegg.compound: "C01157" - metanetx.chemical: "MNXM87584" - sbo: "SBO:0000247" - - !!omap - - id: "s_4208" - - name: "2,3-dihydroxy-3-methylbutanoate" - - compartment: "c" - - formula: "C5H9O4" - - charge: -1 - - annotation: !!omap + - !!omap + - id: "s_4208" + - name: "2,3-dihydroxy-3-methylbutanoate" + - compartment: "c" + - formula: "C5H9O4" + - charge: -1 + - annotation: !!omap - chebi: "CHEBI:11424" - kegg.compound: "C04039" - metanetx.chemical: "MNXM734" - sbo: "SBO:0000247" - - !!omap - - id: "s_4209" - - name: "Ferrocytochrome b5" - - compartment: "erm" - - formula: "" - - annotation: !!omap - - sbo: "SBO:0000247" - - !!omap - - id: "s_4210" - - name: "Ferricytochrome b5" - - compartment: "erm" - - formula: "" - - annotation: !!omap - 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