diff --git a/code/masterScriptWormGEM.m b/code/masterScriptWormGEM.m index 209c637..5d711a7 100644 --- a/code/masterScriptWormGEM.m +++ b/code/masterScriptWormGEM.m @@ -43,9 +43,9 @@ exportTsvFile(metAssoc,'../model/metabolites.tsv'); end -wormGEM = annotateGEM(wormGEM,'../model',{'rxn','met'}); % add annotation data to structure -wormGEM.id = regexprep(wormGEM.id,'-',''); % remove dash from model ID since it causes problems with SBML I/O save('../model/Worm-GEM.mat', 'wormGEM'); exportYaml(wormGEM, '../model/Worm-GEM.yml'); +wormGEM = annotateGEM(wormGEM,'../model',{'rxn','met'}); % add annotation data to structure +wormGEM.id = regexprep(wormGEM.id,'-',''); % remove dash from model ID since it causes problems with SBML I/O exportModel(wormGEM, '../model/Worm-GEM.xml');