From fe70e98e372f39a85885a4267306759d8e10b429 Mon Sep 17 00:00:00 2001
From: "allcontributors[bot]"
<46447321+allcontributors[bot]@users.noreply.github.com>
Date: Mon, 26 Jun 2023 03:49:46 +0000
Subject: [PATCH 1/7] update README.md [skip ci]
---
README.md | 9 +++++----
1 file changed, 5 insertions(+), 4 deletions(-)
diff --git a/README.md b/README.md
index 9eabb942..ae44deab 100644
--- a/README.md
+++ b/README.md
@@ -2,7 +2,7 @@
[![Join the chat at https://gitter.im/SysBioChalmers/Human-GEM](https://badges.gitter.im/SysBioChalmers/Human-GEM.svg)](https://gitter.im/SysBioChalmers/Human-GEM?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge&utm_content=badge) [![GitHub version](https://badge.fury.io/gh/sysbiochalmers%2FHuman-GEM.svg)](https://badge.fury.io/gh/sysbiochalmers%2FHuman-GEM)
[![DOI](https://zenodo.org/badge/105752644.svg)](https://zenodo.org/badge/latestdoi/105752644)
-[![All Contributors](https://img.shields.io/badge/all_contributors-29-success.svg)](#contributors)
+[![All Contributors](https://img.shields.io/badge/all_contributors-30-success.svg)](#contributors)
### Brief Model Description
@@ -131,9 +131,10 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
Devlin Moyer π π¬ π |
Eduard Kerkhoven π¬ |
Hao Wang π π» π£ π π€ π π§ π¦ π π¬ π¬ π β οΈ π’ |
- Jonathan Robinson π π» π£ π π€ π π§ π¦ π π¬ π¬ π β
π’ |
+ Jiahao Luo π |
+ Jonathan Robinson π π» π£ π π€ π π§ π¦ π π¬ π¬ π β
π’ |
Jorge Ferreira π |
Jose L. Cadavid π π¬ |
Juliette π |
@@ -141,9 +142,9 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
Marco Pagni π π¬ |
Mihail Anton π π» π€ π π β οΈ π’ |
Pierre-Etienne Cholley π π» π π¬ π |
- Pierre-Etienne Cholley π |
+ Pierre-Etienne Cholley π |
PkiwiBird π π¬ π» |
Pranas Grigaitis π π π» π¬ |
PΔ±nar KocabaΕ π π¬ π |
@@ -151,9 +152,9 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
Sarah Cherkaoui π π π» π¬ |
Simonas MarciΕ‘auskas π¬ |
TunahanCakir π |
- Xuhang Li π |
+ Xuhang Li π |
feiranl π π» π£ π π€ π π§ π¦ π π¬ π |
johan-gson π π π¬ |
manas-kohli π |
From c2054e9ee521b055e2fc93cc55f848691544034f Mon Sep 17 00:00:00 2001
From: "allcontributors[bot]"
<46447321+allcontributors[bot]@users.noreply.github.com>
Date: Mon, 26 Jun 2023 03:49:47 +0000
Subject: [PATCH 2/7] update .all-contributorsrc [skip ci]
---
.all-contributorsrc | 12 +++++++++++-
1 file changed, 11 insertions(+), 1 deletion(-)
diff --git a/.all-contributorsrc b/.all-contributorsrc
index 78bd21f9..9377f8a1 100644
--- a/.all-contributorsrc
+++ b/.all-contributorsrc
@@ -336,10 +336,20 @@
"contributions": [
"bug"
]
+ },
+ {
+ "login": "JHL-452b",
+ "name": "Jiahao Luo",
+ "avatar_url": "https://avatars.githubusercontent.com/u/67491919?v=4",
+ "profile": "https://github.com/JHL-452b",
+ "contributions": [
+ "bug"
+ ]
}
],
"repoType": "github",
"commitConvention": "none",
"projectName": "Human-GEM",
- "projectOwner": "SysBioChalmers"
+ "projectOwner": "SysBioChalmers",
+ "commitType": "docs"
}
From ba1d8dc362a22815f12b8e35f38f98957277a3e5 Mon Sep 17 00:00:00 2001
From: Mihail Anton
Date: Tue, 27 Jun 2023 00:43:03 +0800
Subject: [PATCH 3/7] chore: update contributions
---
.all-contributorsrc | 13 ++++++--
README.md | 78 ++++++++++++++++++++++-----------------------
2 files changed, 48 insertions(+), 43 deletions(-)
diff --git a/.all-contributorsrc b/.all-contributorsrc
index 9377f8a1..ace4c734 100644
--- a/.all-contributorsrc
+++ b/.all-contributorsrc
@@ -148,6 +148,8 @@
"avatar_url": "https://avatars.githubusercontent.com/u/7326655?v=4",
"profile": "https://github.com/edkerk",
"contributions": [
+ "bug",
+ "code",
"question"
]
},
@@ -306,6 +308,7 @@
"profile": "https://orcid.org/0000-0002-6997-9531",
"contributions": [
"bug",
+ "content",
"research",
"review"
]
@@ -325,7 +328,8 @@
"avatar_url": "https://avatars.githubusercontent.com/u/90753730?v=4",
"profile": "https://github.com/juliette-cooke",
"contributions": [
- "bug"
+ "bug",
+ "content"
]
},
{
@@ -334,7 +338,9 @@
"avatar_url": "https://avatars.githubusercontent.com/u/119626411?v=4",
"profile": "https://github.com/jreimertz",
"contributions": [
- "bug"
+ "bug",
+ "content",
+ "review"
]
},
{
@@ -343,7 +349,8 @@
"avatar_url": "https://avatars.githubusercontent.com/u/67491919?v=4",
"profile": "https://github.com/JHL-452b",
"contributions": [
- "bug"
+ "bug",
+ "content"
]
}
],
diff --git a/README.md b/README.md
index ae44deab..49bdd6b9 100644
--- a/README.md
+++ b/README.md
@@ -122,46 +122,44 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
From 8ec547bec4e08540a214f87ac6127fc99cde8f42 Mon Sep 17 00:00:00 2001
From: Mihail Anton
Date: Tue, 27 Jun 2023 01:06:37 +0800
Subject: [PATCH 4/7] chore: update contributor orcids
---
.all-contributorsrc | 14 +++++++-------
README.md | 14 +++++++-------
2 files changed, 14 insertions(+), 14 deletions(-)
diff --git a/.all-contributorsrc b/.all-contributorsrc
index ace4c734..b0b36166 100644
--- a/.all-contributorsrc
+++ b/.all-contributorsrc
@@ -12,7 +12,7 @@
"login": "JonathanRob",
"name": "Jonathan Robinson",
"avatar_url": "https://avatars.githubusercontent.com/u/22366558?v=4",
- "profile": "https://jonathanrob.github.io",
+ "profile": "https://orcid.org/0000-0001-8567-5960",
"contributions": [
"bug",
"code",
@@ -84,7 +84,7 @@
"login": "pinarkocabas",
"name": "PΔ±nar KocabaΕ",
"avatar_url": "https://avatars.githubusercontent.com/u/32029599?v=4",
- "profile": "",
+ "profile": "https://orcid.org/0000-0001-9788-2019",
"contributions": [
"bug",
"research",
@@ -136,7 +136,7 @@
"login": "avlant",
"name": "Avlant",
"avatar_url": "https://avatars.githubusercontent.com/u/5329888?v=4",
- "profile": "https://github.com/avlant",
+ "profile": "https://orcid.org/0000-0002-9476-4516",
"contributions": [
"bug",
"content"
@@ -146,7 +146,7 @@
"login": "edkerk",
"name": "Eduard Kerkhoven",
"avatar_url": "https://avatars.githubusercontent.com/u/7326655?v=4",
- "profile": "https://github.com/edkerk",
+ "profile": "https://orcid.org/0000-0002-3593-5792",
"contributions": [
"bug",
"code",
@@ -184,7 +184,7 @@
"login": "BenjaSanchez",
"name": "BenjamΓn SΓ‘nchez",
"avatar_url": "https://avatars.githubusercontent.com/u/9384349?v=4",
- "profile": "https://github.com/BenjaSanchez",
+ "profile": "https://orcid.org/0000-0001-6093-4110",
"contributions": [
"question"
]
@@ -246,7 +246,7 @@
"login": "johan-gson",
"name": "johan-gson",
"avatar_url": "https://avatars.githubusercontent.com/u/32481323?v=4",
- "profile": "https://github.com/johan-gson",
+ "profile": "https://orcid.org/0000-0001-5072-2659",
"contributions": [
"bug",
"content",
@@ -286,7 +286,7 @@
"login": "feiranl",
"name": "feiranl",
"avatar_url": "https://avatars.githubusercontent.com/u/32157802?v=4",
- "profile": "https://github.com/feiranl",
+ "profile": "https://orcid.org/0000-0001-9155-5260",
"contributions": [
"bug",
"code",
diff --git a/README.md b/README.md
index 49bdd6b9..40cd6543 100644
--- a/README.md
+++ b/README.md
@@ -124,16 +124,16 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
Anne Niknejad π π π¬ |
- Avlant π π |
- BenjamΓn SΓ‘nchez π¬ |
+ Avlant π π |
+ BenjamΓn SΓ‘nchez π¬ |
Daniel Weindl π |
Devlin Moyer π π π¬ π |
- Eduard Kerkhoven π π» π¬ |
+ Eduard Kerkhoven π π» π¬ |
Hao Wang π π» π£ π π€ π π§ π¦ π π¬ π¬ π β οΈ π’ |
Jiahao Luo π π |
- Jonathan Robinson π π» π£ π π€ π π§ π¦ π π¬ π¬ π β
π’ |
+ Jonathan Robinson π π» π£ π π€ π π§ π¦ π π¬ π¬ π β
π’ |
Jorge Ferreira π |
Jose L. Cadavid π π¬ |
Juliette π π |
@@ -146,7 +146,7 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
Pierre-Etienne Cholley π |
PkiwiBird π π¬ π» |
Pranas Grigaitis π π π» π¬ |
- PΔ±nar KocabaΕ π π¬ π |
+ PΔ±nar KocabaΕ π π¬ π |
Rasool Saghaleyni π€ π¬ |
Sarah Cherkaoui π π π» π¬ |
Simonas MarciΕ‘auskas π¬ |
@@ -154,8 +154,8 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
Xuhang Li π |
- feiranl π π» π£ π π€ π π§ π¦ π π¬ π |
- johan-gson π π π¬ |
+ feiranl π π» π£ π π€ π π§ π¦ π π¬ π |
+ johan-gson π π π¬ |
manas-kohli π |
smoretti π π¬ |
stairs π π |
From fb90fd506db3a8205ba7600bab94e4554bc1c5e0 Mon Sep 17 00:00:00 2001
From: Mihail Anton
Date: Tue, 27 Jun 2023 01:14:59 +0800
Subject: [PATCH 5/7] chore: update more contributor orcids
---
.all-contributorsrc | 4 ++--
README.md | 4 ++--
2 files changed, 4 insertions(+), 4 deletions(-)
diff --git a/.all-contributorsrc b/.all-contributorsrc
index b0b36166..eb53061d 100644
--- a/.all-contributorsrc
+++ b/.all-contributorsrc
@@ -215,7 +215,7 @@
"login": "mpagni12",
"name": "Marco Pagni",
"avatar_url": "https://avatars.githubusercontent.com/u/45748199?v=4",
- "profile": "https://github.com/mpagni12",
+ "profile": "https://orcid.org/0000-0001-9292-9463",
"contributions": [
"bug",
"research"
@@ -257,7 +257,7 @@
"login": "dweindl",
"name": "Daniel Weindl",
"avatar_url": "https://avatars.githubusercontent.com/u/18048784?v=4",
- "profile": "https://github.com/dweindl",
+ "profile": "https://orcid.org/0000-0001-9963-6057",
"contributions": [
"bug"
]
diff --git a/README.md b/README.md
index 40cd6543..158b34c0 100644
--- a/README.md
+++ b/README.md
@@ -126,7 +126,7 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
Anne Niknejad π π π¬ |
Avlant π π |
BenjamΓn SΓ‘nchez π¬ |
- Daniel Weindl π |
+ Daniel Weindl π |
Devlin Moyer π π π¬ π |
Eduard Kerkhoven π π» π¬ |
Hao Wang π π» π£ π π€ π π§ π¦ π π¬ π¬ π β οΈ π’ |
@@ -138,7 +138,7 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
Jose L. Cadavid π π¬ |
Juliette π π |
Justin Reimertz π π π |
- Marco Pagni π π¬ |
+ Marco Pagni π π¬ |
Mihail Anton π π» π€ π π β οΈ π’ |
Pierre-Etienne Cholley π π» π π¬ π |
From be92974b09f92527e3bf4bb49518a55c4ebe19f7 Mon Sep 17 00:00:00 2001
From: Mihail Anton
Date: Wed, 28 Jun 2023 16:46:35 +0800
Subject: [PATCH 6/7] chore: update contributor orcids
---
.all-contributorsrc | 19 ++++++++++---------
README.md | 18 +++++++++---------
2 files changed, 19 insertions(+), 18 deletions(-)
diff --git a/.all-contributorsrc b/.all-contributorsrc
index eb53061d..f8d3c539 100644
--- a/.all-contributorsrc
+++ b/.all-contributorsrc
@@ -95,7 +95,7 @@
"login": "PkiwiBird",
"name": "PkiwiBird",
"avatar_url": "https://avatars.githubusercontent.com/u/8766764?v=4",
- "profile": "",
+ "profile": "https://orcid.org/0000-0002-5120-9459",
"contributions": [
"bug",
"research",
@@ -124,7 +124,7 @@
"login": "pranasag",
"name": "Pranas Grigaitis",
"avatar_url": "https://avatars.githubusercontent.com/u/38076281?v=4",
- "profile": "",
+ "profile": "https://orcid.org/0000-0002-6379-7024",
"contributions": [
"bug",
"content",
@@ -150,7 +150,8 @@
"contributions": [
"bug",
"code",
- "question"
+ "question",
+ "review"
]
},
{
@@ -166,7 +167,7 @@
"login": "XuhangLi",
"name": "Xuhang Li",
"avatar_url": "https://avatars.githubusercontent.com/u/41695293?v=4",
- "profile": "https://github.com/XuhangLi",
+ "profile": "https://orcid.org/0000-0001-6071-9605",
"contributions": [
"bug"
]
@@ -193,7 +194,7 @@
"login": "cherkaos",
"name": "Sarah Cherkaoui",
"avatar_url": "https://avatars.githubusercontent.com/u/4625396?v=4",
- "profile": "https://github.com/cherkaos",
+ "profile": "https://orcid.org/0000-0002-0636-4177",
"contributions": [
"bug",
"content",
@@ -266,7 +267,7 @@
"login": "Rasools",
"name": "Rasool Saghaleyni",
"avatar_url": "https://avatars.githubusercontent.com/u/22166601?v=4",
- "profile": "https://github.com/Rasools",
+ "profile": "https://orcid.org/0000-0003-0956-039X",
"contributions": [
"ideas",
"research"
@@ -276,7 +277,7 @@
"login": "stairs",
"name": "stairs",
"avatar_url": "https://avatars.githubusercontent.com/u/6586371?v=4",
- "profile": "https://github.com/stairs",
+ "profile": "https://orcid.org/0000-0003-2428-7061",
"contributions": [
"bug",
"content"
@@ -336,7 +337,7 @@
"login": "jreimertz",
"name": "Justin Reimertz",
"avatar_url": "https://avatars.githubusercontent.com/u/119626411?v=4",
- "profile": "https://github.com/jreimertz",
+ "profile": "https://orcid.org/0009-0001-2847-5425",
"contributions": [
"bug",
"content",
@@ -347,7 +348,7 @@
"login": "JHL-452b",
"name": "Jiahao Luo",
"avatar_url": "https://avatars.githubusercontent.com/u/67491919?v=4",
- "profile": "https://github.com/JHL-452b",
+ "profile": "https://orcid.org/0000-0002-7111-1360",
"contributions": [
"bug",
"content"
diff --git a/README.md b/README.md
index 158b34c0..eeaef189 100644
--- a/README.md
+++ b/README.md
@@ -128,37 +128,37 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
BenjamΓn SΓ‘nchez π¬ |
Daniel Weindl π |
Devlin Moyer π π π¬ π |
- Eduard Kerkhoven π π» π¬ |
+ Eduard Kerkhoven π π» π¬ π |
Hao Wang π π» π£ π π€ π π§ π¦ π π¬ π¬ π β οΈ π’ |
- Jiahao Luo π π |
+ Jiahao Luo π π |
Jonathan Robinson π π» π£ π π€ π π§ π¦ π π¬ π¬ π β
π’ |
Jorge Ferreira π |
Jose L. Cadavid π π¬ |
Juliette π π |
- Justin Reimertz π π π |
+ Justin Reimertz π π π |
Marco Pagni π π¬ |
Mihail Anton π π» π€ π π β οΈ π’ |
Pierre-Etienne Cholley π π» π π¬ π |
Pierre-Etienne Cholley π |
- PkiwiBird π π¬ π» |
- Pranas Grigaitis π π π» π¬ |
+ PkiwiBird π π¬ π» |
+ Pranas Grigaitis π π π» π¬ |
PΔ±nar KocabaΕ π π¬ π |
- Rasool Saghaleyni π€ π¬ |
- Sarah Cherkaoui π π π» π¬ |
+ Rasool Saghaleyni π€ π¬ |
+ Sarah Cherkaoui π π π» π¬ |
Simonas MarciΕ‘auskas π¬ |
TunahanCakir π |
- Xuhang Li π |
+ Xuhang Li π |
feiranl π π» π£ π π€ π π§ π¦ π π¬ π |
johan-gson π π π¬ |
manas-kohli π |
smoretti π π¬ |
- stairs π π |
+ stairs π π |
From 8fd9a17c30df94198778b1c5d836a9133c20ca2b Mon Sep 17 00:00:00 2001
From: Mihail Anton
Date: Thu, 29 Jun 2023 23:16:13 +0800
Subject: [PATCH 7/7] chore: update orcid for contrib
---
.all-contributorsrc | 2 +-
README.md | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/.all-contributorsrc b/.all-contributorsrc
index f8d3c539..59cfd585 100644
--- a/.all-contributorsrc
+++ b/.all-contributorsrc
@@ -237,7 +237,7 @@
"login": "CadavidJoseL",
"name": "Jose L. Cadavid",
"avatar_url": "https://avatars.githubusercontent.com/u/62765618?v=4",
- "profile": "https://github.com/CadavidJoseL",
+ "profile": "https://orcid.org/0000-0002-9966-7352",
"contributions": [
"bug",
"research"
diff --git a/README.md b/README.md
index eeaef189..3a27a02f 100644
--- a/README.md
+++ b/README.md
@@ -135,7 +135,7 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
Jonathan Robinson π π» π£ π π€ π π§ π¦ π π¬ π¬ π β
π’ |
Jorge Ferreira π |
- Jose L. Cadavid π π¬ |
+ Jose L. Cadavid π π¬ |
Juliette π π |
Justin Reimertz π π π |
Marco Pagni π π¬ |