From 035e08e202995a1d9d802d3a711ed1568b9ae910 Mon Sep 17 00:00:00 2001 From: Jiahao Luo <67491919+JHL-452b@users.noreply.github.com> Date: Tue, 17 Dec 2024 08:56:16 +0800 Subject: [PATCH] Fix-GPR curation for EMP and Pentose and glucuronate interconversions (#924) * Fix-GPR_curation_for_EMP-Pentose_and_glucuronate_interconversions * chore: add macaw test result --------- Co-authored-by: JHL-452b Co-authored-by: Eduard Kerkhoven --- model/Human-GEM.yml | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/model/Human-GEM.yml b/model/Human-GEM.yml index e8e3838f..79c418c4 100644 --- a/model/Human-GEM.yml +++ b/model/Human-GEM.yml @@ -67661,7 +67661,7 @@ - MAM02553c: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000147576 or ENSG00000172955 or ENSG00000180011 or ENSG00000187758 or ENSG00000196344 or ENSG00000196616 or ENSG00000197894 or ENSG00000198099 or ENSG00000248144" + - gene_reaction_rule: "ENSG00000172955 or ENSG00000187758 or ENSG00000196344 or ENSG00000196616 or ENSG00000197894 or ENSG00000198099 or ENSG00000248144" - rxnNotes: "" - rxnFrom: "HMRdatabase" - eccodes: "1.1.1.1;1.1.1.71" @@ -67816,7 +67816,7 @@ - MAM02555c: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000006534 or ENSG00000108602 or ENSG00000132746 or ENSG00000184254" + - gene_reaction_rule: "ENSG00000006534 or ENSG00000108602 or ENSG00000132746" - rxnNotes: "" - rxnFrom: "HMRdatabase" - eccodes: "1.2.1.5" @@ -67930,7 +67930,7 @@ - MAM02819c: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000180011" + - gene_reaction_rule: "" - rxnNotes: "" - rxnFrom: "HMRdatabase" - eccodes: "1.2.1.49" @@ -68265,7 +68265,7 @@ - MAM02578r: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000131482 or ENSG00000141349 or ENSG00000152254" + - gene_reaction_rule: "ENSG00000152254" - rxnNotes: "" - rxnFrom: "HMRdatabase" - eccodes: "3.1.3.9" @@ -69628,7 +69628,7 @@ - MAM03155c: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000115425 or ENSG00000116353" + - gene_reaction_rule: "" - rxnNotes: "" - rxnFrom: "HMRdatabase" - eccodes: "1.1.1.15" @@ -69647,7 +69647,7 @@ - MAM03155c: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000085662 or ENSG00000198074" + - gene_reaction_rule: "ENSG00000085662" - rxnNotes: "" - rxnFrom: "HMRdatabase" - eccodes: "1.1.1.21" @@ -69873,7 +69873,7 @@ - MAM03109c: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000115652" + - gene_reaction_rule: "" - rxnNotes: "" - rxnFrom: "HMRdatabase" - eccodes: "4.1.1.35"