diff --git a/.all-contributorsrc b/.all-contributorsrc
index bcaede86..81c78a73 100644
--- a/.all-contributorsrc
+++ b/.all-contributorsrc
@@ -327,6 +327,15 @@
"contributions": [
"bug"
]
+ },
+ {
+ "login": "jreimertz",
+ "name": "Justin Reimertz",
+ "avatar_url": "https://avatars.githubusercontent.com/u/119626411?v=4",
+ "profile": "https://github.com/jreimertz",
+ "contributions": [
+ "bug"
+ ]
}
],
"repoType": "github",
diff --git a/.github/workflows/check-metabolictasks.yml b/.github/workflows/check-metabolictasks.yml
index f51cbac8..634c6323 100644
--- a/.github/workflows/check-metabolictasks.yml
+++ b/.github/workflows/check-metabolictasks.yml
@@ -10,10 +10,9 @@ jobs:
matrix:
task-type: [essential, verification]
steps:
+ - name: Checkout
+ uses: actions/checkout@v3
- - name: Checkout
- uses: actions/checkout@v3
-
- - name: Check ${{ matrix.task-type }} metabolic tasks
- run: |
- /usr/local/bin/matlab -nodisplay -nosplash -nodesktop -r "addpath(genpath('.')); testMetabolicTasks('${{ matrix.task-type }}'); exit;"
+ - name: Check ${{ matrix.task-type }} metabolic tasks
+ run: |
+ /usr/local/bin/matlab -nodisplay -nosplash -nodesktop -r "addpath(genpath('.')); testMetabolicTasks('${{ matrix.task-type }}');"
diff --git a/.github/workflows/yaml-conversion.yml b/.github/workflows/yaml-conversion.yml
index 4bd9989f..83d05d19 100644
--- a/.github/workflows/yaml-conversion.yml
+++ b/.github/workflows/yaml-conversion.yml
@@ -8,10 +8,9 @@ jobs:
timeout-minutes: 60
steps:
+ - name: Checkout
+ uses: actions/checkout@v3
- - name: Checkout
- uses: actions/checkout@v3
-
- - name: Run conversion script
- run: |
- /usr/local/bin/matlab -nodisplay -nosplash -nodesktop -r "addpath(genpath('.')); run('code/test/testYamlConversion.m'); exit;"
+ - name: Run conversion script
+ run: |
+ /usr/local/bin/matlab -nodisplay -nosplash -nodesktop -r "addpath(genpath('.')); testYamlConversion"
diff --git a/.github/workflows/yaml-validation.yml b/.github/workflows/yaml-validation.yml
index f05e8387..d76314c8 100644
--- a/.github/workflows/yaml-validation.yml
+++ b/.github/workflows/yaml-validation.yml
@@ -25,5 +25,8 @@ jobs:
## Return non-zero exit code on warnings as well as errors
# strict: # optional, default is false
+ - name: Basic MEMOTE tests
+ run: python code/test/memoteTest.py
+
- name: Test import with cobrapy and consistency with annotation files
- run: python code/test/sanityCheck.py
\ No newline at end of file
+ run: python code/test/sanityCheck.py
diff --git a/README.md b/README.md
index 56aa8331..243e2e2e 100644
--- a/README.md
+++ b/README.md
@@ -2,7 +2,7 @@
[](https://gitter.im/SysBioChalmers/Human-GEM?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge&utm_content=badge) [](https://badge.fury.io/gh/sysbiochalmers%2FHuman-GEM)
[](https://zenodo.org/badge/latestdoi/105752644)
-[](#contributors)
+[](#contributors)
### Brief Model Description
@@ -137,13 +137,14 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
Jorge Ferreira
π |
Jose L. Cadavid
π π¬ |
Juliette
π |
+ 
Justin Reimertz
π |
Marco Pagni
π π¬ |
Mihail Anton
π π» π€ π π β οΈ π’ |
Pierre-Etienne Cholley
π π» π π¬ π |
Pierre-Etienne Cholley
π |
- 
PkiwiBird
π π¬ π» |
+
PkiwiBird
π π¬ π» |
Pranas Grigaitis
π π π» π¬ |
PΔ±nar KocabaΕ
π π¬ π |
Rasool Saghaleyni
π€ π¬ |
@@ -151,9 +152,9 @@ A collection of manually curated 2D metabolic maps associated with Human-GEM are
Simonas MarciΕ‘auskas
π¬ |
TunahanCakir
π |
Xuhang Li
π |
- 
feiranl
π π» π£ π π€ π π§ π¦ π π¬ π |
+
feiranl
π π» π£ π π€ π π§ π¦ π π¬ π |
johan-gson
π π π¬ |
manas-kohli
π |
smoretti
π π¬ |
diff --git a/code/GPRs/simplifyGrRules.m b/code/GPRs/simplifyGrRules.m
index 837cf80c..e3e1002a 100644
--- a/code/GPRs/simplifyGrRules.m
+++ b/code/GPRs/simplifyGrRules.m
@@ -176,7 +176,7 @@
eqn = str2sym(eqn_str);
% separate equation into terms/pieces ("children")
-eqn_pieces = arrayfun(@char,children(eqn),'UniformOutput',false);
+eqn_pieces = cellfun(@char,children(eqn),'UniformOutput',false);
% find pieces that are further separable, and recursively separate until
% all pieces are single genes
@@ -202,12 +202,14 @@
%% Functions to test whether an equation is a collection of ORs or ANDs
function res = is_or(eqn)
% check if outermost operations contain ORs
-res = length(regexp(char(eqn),'\|')) > length(regexp(char(children(eqn)),'\|'));
+res = length(regexp(char(eqn),'\|')) > ...
+ sum(cell2mat(cellfun(@(x) length(regexp(char(x), '\|')), children(eqn), 'UniformOutput', false)));
end
function res = is_and(eqn)
% check if outermost operations contain ANDs
-res = length(regexp(char(eqn),'&')) > length(regexp(char(children(eqn)),'&'));
+res = length(regexp(char(eqn),'&')) > ...
+ sum(cell2mat(cellfun(@(x) length(regexp(char(x), '\&')), children(eqn), 'UniformOutput', false)));
end
diff --git a/code/addMetabolicNetwork.m b/code/addMetabolicNetwork.m
index f5551bfa..2c2ed107 100644
--- a/code/addMetabolicNetwork.m
+++ b/code/addMetabolicNetwork.m
@@ -144,8 +144,11 @@
newGenes = setdiff(newGenes, newModel.genes);
end
-% append new genes to list of model genes
+% append new genes and their names to model
newModel.genes = [newModel.genes; newGenes];
+emptyGeneNames = newGenes;
+emptyGeneNames(:) = {''};
+newModel.geneShortNames = [newModel.geneShortNames; emptyGeneNames];
% add new columns to rxnGeneMat will be updated after the new reactions are added below.
newModel.rxnGeneMat(:, end+1:end+numel(newGenes)) = 0;
diff --git a/code/estimateEssentialGenes.m b/code/estimateEssentialGenes.m
new file mode 100644
index 00000000..aecd2dae
--- /dev/null
+++ b/code/estimateEssentialGenes.m
@@ -0,0 +1,107 @@
+function [eGenes, INIT_output] = estimateEssentialGenes(model, dataFile, taskStruct, useGeneSymbol)
+% generate tINIT models and estimate essential genes
+%
+% Input:
+%
+% model reference human or animal model
+%
+% dataFile (opt, default Hart2015_RNAseq.txt)
+%
+% taskStruct metabolic task structure (opt, default is Essential tasks)
+%
+% useGeneSymbol use gene symbols as ids and in grRules (opt, default TRUE)
+%
+% Output:
+%
+% eGenes results structure with the following fields:
+% taskList list of metabolic tasks that were tested
+% tissues list of tissues (model IDs) corresponding to each model
+% geneList cell array of the list of genes from each model
+% essentialGenes cell array with one entry per model, where each
+% entry is a logical matrix with rows corresponding
+% to genes (in geneList) and columns to tasks (in
+% taskList). Entries in the matrix are true when a
+% gene is essential for a task, and false otherwise.
+%
+% INIT_output structure containing tINIT models (or information
+% necessary to regenerate tINIT models) for which gene
+% essentiality will be evaluated.
+%
+% Note: This function may take long computation time.
+%
+
+
+if nargin < 2
+ % load Hart et al. RNA-Seq cell line data
+ dataFile = 'Hart2015_RNAseq.txt';
+end
+
+if nargin < 3
+ taskStruct = parseTaskList('metabolicTasks_Essential.txt');
+end
+
+if nargin < 4
+ useGeneSymbol = true;
+end
+
+% replace gene IDs with gene symbols
+if useGeneSymbol
+ idMapping = [model.genes, model.geneShortNames];
+ [grRules,genes,rxnGeneMat] = replaceGrRules(model.grRules,idMapping);
+ model.grRules = grRules;
+ model.genes = genes;
+ model.rxnGeneMat = rxnGeneMat;
+end
+
+% pre-process RNA-Seq data
+disp('Step 1: preprocess and preliminary step')
+tmp = readtable(dataFile);
+arrayData.genes = tmp.gene;
+arrayData.tissues = tmp.Properties.VariableNames(2:end)';
+arrayData.levels = table2array(tmp(:,2:end));
+
+
+% Run some preliminary steps
+[~,deletedDeadEndRxns] = simplifyModel(model,true,false,true,true,true);
+cModel = removeReactions(model,deletedDeadEndRxns,false,true);
+[taskReport, essentialRxnMat] = checkTasks(cModel,[],true,false,true,taskStruct);
+
+
+% add pre-processing results to arrayData structure
+arrayData.deletedDeadEndRxns = deletedDeadEndRxns;
+arrayData.taskReport = taskReport;
+arrayData.essentialRxnMat = essentialRxnMat;
+arrayData.threshold = 1;
+
+
+% run tINIT
+disp('Step 2: get tissue models')
+model = addBoundaryMets(model);
+params = {};
+INIT_output = {};
+
+for i = 1:length(arrayData.tissues)
+ disp(['Tissue ', num2str(i), ' out of ', num2str(length(arrayData.tissues)),': ', arrayData.tissues{i}])
+
+ % First try to run tINIT with shorter time limit. If it fails, then
+ % try again with a longer time limit.
+ try
+ params.TimeLimit = 1000;
+ init_model = getINITModel2(model,arrayData.tissues{i},[],[],arrayData,[],true,[],true,true,taskStruct,params);
+ catch
+ params.TimeLimit = 5000;
+ init_model = getINITModel2(model,arrayData.tissues{i},[],[],arrayData,[],true,[],true,true,taskStruct,params);
+ end
+
+ init_model.id = arrayData.tissues{i};
+ INIT_output.id{i,1} = init_model.id;
+ INIT_output.model{i,1} = init_model;
+
+end
+
+disp('Step 3: get essential genes')
+% get essential genes for each model and task
+eGenes = getTaskEssentialGenes(INIT_output, model, taskStruct);
+eGenes.refModel = model;
+
+end
diff --git a/code/evaluateHart2015Essentiality.m b/code/evaluateHart2015Essentiality.m
new file mode 100644
index 00000000..1ae32aa8
--- /dev/null
+++ b/code/evaluateHart2015Essentiality.m
@@ -0,0 +1,153 @@
+function results = evaluateHart2015Essentiality(eGenes)
+% Evaluate and compare experimental fitness genes with essentiality results
+% predicted from 5 cell-line specific GEMs from Hart 2015 datasets
+%
+% Input:
+%
+% eGenes results structure with the following fields:
+% taskList list of metabolic tasks that were tested
+% tissues list of tissues (model IDs) corresponding to each model
+% geneList cell array of the list of genes from each model
+% essentialGenes cell array with one entry per model, where each
+% entry is a logical matrix with rows corresponding
+% to genes (in geneList) and columns to tasks (in
+% taskList). Entries in the matrix are true when a
+% gene is essential for a task, and false otherwise.
+%
+% Output:
+%
+%
+% results evaluation with values of TP, TN, FP, FN, accuracy,
+% sensitivity, specificity, F1, MCC
+%
+% Example usage:
+%
+% results = evaluateEssentialityHart2015(eGenes)
+%
+
+
+%% load Hart2015 essentiality data
+
+% Table S2 from the Hart2015 datasets:
+% In this study, essential genes are, by definition, a subset of fitness genes
+x = readtable('Hart2015_TableS2.xlsx');
+
+% remove duplicated rows (MARCH1 and MARCH2 genes)
+ind1 = find(ismember(x.Gene,'MARCH1'),1,'last');
+ind2 = find(ismember(x.Gene,'MARCH2'),1,'last');
+x([ind1;ind2],:) = [];
+
+% extract gene list and cell types
+genes = x.Gene;
+celltypes = regexprep(upper(x.Properties.VariableNames(3:7)'),'BF_','');
+
+% for each cell type, determine the "fitness" genes, defined as those with
+% a 5% FDRs were chosen as thresholds (the values are extracted from the
+% supporting information of the Hart 2015 paper. Genes observed in 3 or more
+% of the 5 TKO screens (n=1,580) were considered as core fitness genes
+bf_data = table2array(x(:,3:7));
+bf_thresh = {'HCT116', 1.57
+ 'HELA', 15.47
+ 'GBM', 3.20
+ 'RPE1', 6.84
+ 'DLD1', 3.57};
+
+% construct fitness matrix according to threshold values
+fitness_mat = zeros(numel(genes),numel(celltypes));
+for i = 1:numel(celltypes)
+ [~,ind] = ismember(celltypes{i},bf_thresh(:,1));
+ fitness_mat(:,i) = bf_data(:,i) > bf_thresh{ind,2};
+end
+fitness_mat(isnan(bf_data)) = NaN; % mark missing values differently than non-hits
+
+% also get the genes that were essential in all 5 cell lines ("all")
+celltypes(end+1) = {'all'};
+fitness_mat(:,end+1) = all(fitness_mat == 1,2);
+
+% put Hart2015 essentiality data into data structure for comparison
+expdata = {};
+expdata.genes = genes;
+expdata.tissues = celltypes;
+expdata.essential = fitness_mat;
+
+
+%% Load and organize model-predicted gene essentiality results
+
+% re-organize essentialGenes logical matrices into a uniform 3D matrix,
+% where rows represent genes, columns are tasks, and the 3rd dimension is
+% different cell lines.
+eGenes.essentialMat = false(numel(eGenes.refModel.genes), numel(eGenes.taskList), numel(eGenes.tissues));
+for i = 1:numel(eGenes.tissues)
+ [hasMatch,ind] = ismember(eGenes.refModel.genes,eGenes.geneList{i});
+ eGenes.essentialMat(hasMatch,:,i) = eGenes.essentialGenes{i}(ind(hasMatch),:);
+end
+
+
+%% compare model predictions to experimental essentiality data
+
+% specify model-determined essential genes
+modelPred = squeeze(any(eGenes.essentialMat,2)); % essential for any task
+
+tissues = eGenes.tissues;
+tissues(end+1) = {'all'}; % also include "all" category for Hart2015 dataset
+
+% calculate true and false positives and negatives
+[TP,TN,FP,FN,Penr] = deal(nan(numel(tissues),1)); % initialize variables
+for i = 1:numel(tissues)
+
+ [~,tissue_ind] = ismember(tissues(i), expdata.tissues);
+ if tissue_ind == 0
+ continue % a few tissues are missing from the DepMap dataset
+ end
+
+ modelGenes = eGenes.refModel.genes;
+ if strcmpi(tissues{i},'all')
+ modelEssential = modelGenes(sum(modelPred,2) == size(modelPred,2));
+ else
+ modelEssential = modelGenes(modelPred(:,i));
+ end
+ modelNonEssential = setdiff(modelGenes,modelEssential);
+
+ expGenes = expdata.genes(~isnan(expdata.essential(:,tissue_ind)));
+ expEssential = expdata.genes(expdata.essential(:,tissue_ind) == 1);
+ expNonEssential = setdiff(expGenes,expEssential);
+
+ TP(i) = sum(ismember(modelEssential, expEssential)); % true positives
+ TN(i) = sum(ismember(modelNonEssential, expNonEssential)); % true negatives
+ FP(i) = sum(ismember(modelEssential, expNonEssential)); % false positives
+ FN(i) = sum(ismember(modelNonEssential, expEssential)); % false negatives
+
+ Penr(i) = EnrichmentTest(intersect(modelGenes,expGenes), intersect(modelEssential,expGenes), intersect(expEssential,modelGenes));
+end
+
+% calculate some metrics
+sensitivity = TP./(TP + FN);
+specificity = TN./(TN + FP);
+accuracy = (TP + TN)./(TP + TN + FP + FN);
+F1 = 2*TP./(2*TP + FP + FN);
+MCC = ((TP.*TN) - (FP.*FN))./sqrt((TP+FP).*(TP+FN).*(TN+FP).*(TN+FN)); % Matthews correlation coefficient
+PenrAdj = adjust_pvalues(Penr,'Benjamini');
+
+% get results for cell types
+results = [{'cellLine','TP','TN','FP','FN','accuracy','sensitivity','specificity','F1','MCC','Penr','logPenr','PenrAdj','logPenrAdj'};
+ [tissues, num2cell([TP, TN, FP, FN, accuracy, sensitivity, specificity, F1, MCC, Penr, -log10(Penr), PenrAdj, -log10(PenrAdj)])]];
+
+
+end
+
+function [penr,pdep] = EnrichmentTest(pop,sample,successes)
+% Caculates p-value of enrichment of successes in a sample.
+%
+% Evaluates the significance of enrichment (and depletion) of SUCCESSES in
+% a SAMPLE drawn from population POP using the hypergeometric test.
+
+x = numel(intersect(successes,sample)); % calc # of successes in sample
+m = numel(pop); % calc size of population
+k = numel(intersect(successes,pop));
+n = numel(sample);
+
+penr = hygecdf(x-1,m,k,n,'upper');
+pdep = hygecdf(x,m,k,n);
+
+end
+
diff --git a/code/getTaskEssentialGenes.m b/code/getTaskEssentialGenes.m
new file mode 100644
index 00000000..f6811606
--- /dev/null
+++ b/code/getTaskEssentialGenes.m
@@ -0,0 +1,89 @@
+function eGenes = getTaskEssentialGenes(INIT_output, refModel, taskStruct)
+% Identify genes essential for different tasks in different tINIT models.
+%
+% Input:
+%
+% INIT_output structure containing tINIT models (or information
+% necessary to regenerate tINIT models) for which gene
+% essentiality will be evaluated.
+%
+% refModel reference model from which the tINIT models were
+% generated.
+%
+% taskStruct metabolic task structure
+%
+%
+% Output:
+%
+% eGenes results structure with the following fields:
+% taskList list of metabolic tasks that were tested
+% tissues list of tissues (model IDs) corresponding to each model
+% geneList cell array of the list of genes from each model
+% essentialGenes cell array with one entry per model, where each
+% entry is a logical matrix with rows corresponding
+% to genes (in geneList) and columns to tasks (in
+% taskList). Entries in the matrix are true when a
+% gene is essential for a task, and false otherwise.
+%
+%
+% Usage:
+%
+% eGenes = getTaskEssentialGenes(INIT_output, refModel, taskStruct);
+%
+%
+% Jonathan Robinson, 2019-10-26
+
+
+
+if ~isfield(INIT_output, 'model')
+ % if INIT_output does not contain complete models, they first need to
+ % be regenerated
+ models = regen_tINIT_model(refModel, INIT_output);
+else
+ models = INIT_output.model(:);
+end
+
+% ensure that model ID is set to the tissue names
+for i = 1:numel(models)
+ if ~isfield(INIT_output,'tissues')
+ models{i}.id = INIT_output.id{i};
+ else
+ models{i}.id = INIT_output.tissues{i};
+ end
+end
+
+% replace Ensembl IDs with gene symbols
+for i = 1:length(models)
+ if any(startsWith(models{i}.genes,'ENSG000'))
+ idMapping = [models{i}.genes, models{i}.geneShortNames];
+ [grRules,genes,rxnGeneMat] = replaceGrRules(models{i}.grRules,idMapping);
+ models{i}.grRules = grRules;
+ models{i}.genes = genes;
+ models{i}.rxnGeneMat = rxnGeneMat;
+ end
+end
+
+% iterate through the different models
+parfor i = 1:length(models)
+
+ m = models{i};
+
+ % determine essential genes for each task
+ [~,essentialGenes] = checkTasksGenes(m,[],false,false,true,taskStruct);
+
+ % collect results
+ tissues{i,1} = m.id;
+ geneList{i,1} = m.genes;
+ allEssentials{i,1} = essentialGenes;
+
+end
+
+% gather results into eGenes structure
+eGenes = {};
+eGenes.taskList = {taskStruct(:).description}';
+eGenes.tissues = tissues;
+eGenes.geneList = geneList;
+eGenes.essentialGenes = allEssentials;
+
+
+
diff --git a/code/io/importYaml.m b/code/io/importYaml.m
index 7f1d7d71..b10adbd1 100644
--- a/code/io/importYaml.m
+++ b/code/io/importYaml.m
@@ -28,14 +28,16 @@
if verLessThan('matlab','9.9') %readlines introduced 2020b
fid=fopen(yamlFilename);
line_raw=cell(1000000,1);
+ i=1;
while ~feof(fid)
line_raw{i}=fgetl(fid);
i=i+1;
end
line_raw(i:end)=[];
line_raw=string(line_raw);
+ fclose(fid);
else
- line_raw=readlines(yamlFilename');
+ line_raw=readlines(yamlFilename);
end
line_key=regexprep(line_raw,'^ *-? ([^:]+)(:).*','$1');
@@ -118,10 +120,6 @@
if ~silentMode
fprintf('\t%d\n', section);
end
- if readSubsystems
- model.subSystems(end+1,1) = {subSystems}; %last entry from section 3
- readSubsystems = false;
- end
continue
case '- compartments: !!omap'
section = 5;
@@ -216,15 +214,15 @@
case 'confidence_score'
model = readFieldValue(model, 'rxnConfidenceScores', tline_value);
+ if readSubsystems
+ model.subSystems(end+1,1) = {subSystems};
+ readSubsystems = false;
+ end
case 'metabolites'
readEquation = true;
leftEquation = '';
rightEquation = '';
- if readSubsystems
- model.subSystems(end+1,1) = {subSystems};
- readSubsystems = false;
- end
otherwise
if readSubsystems
@@ -274,7 +272,7 @@
fprintf('\nimporting completed\nfollow-up processing...');
end
[~, model.metComps] = ismember(model.metComps, model.comps);
-model.metCharges = int64(str2double(model.metCharges));
+model.metCharges = str2double(model.metCharges);
model.lb = str2double(model.lb);
model.ub = str2double(model.ub);
model.annotation.defaultLB = min(model.lb);
diff --git a/code/misc/adjust_pvalues.m b/code/misc/adjust_pvalues.m
new file mode 100644
index 00000000..237ab4b2
--- /dev/null
+++ b/code/misc/adjust_pvalues.m
@@ -0,0 +1,115 @@
+function Padj = adjust_pvalues(P,method,dim)
+%adjust_pvalues Adjust p-values for multiple comparisons/testing.
+%
+% Usage:
+%
+% Padj = adjust_pvalues(P,method,dim);
+%
+%
+% Input:
+%
+% P A vector or matrix of p-values. Does not need to be sorted,
+% and will be returned in the order provided.
+%
+% method 'bonferroni' - Use the Bonferroni correction.
+% 'holm' - Use the Holm-Bonferroni correction.
+% 'benjamini' - Use the Benjamini-Hochberg correction.
+%
+% dim Dimension along which to group p-values. By default, p-values
+% will be grouped by column, unless P is a row-vector, in which
+% case the row vector will be treated as a single group. The
+% number of p-values in a group corresponds to the number of
+% "tests" for which they will be corrected.
+% 1 = by columns (default)
+% 2 = by rows
+% 'all' = treat all p-values as single group
+%
+%
+% Output:
+%
+% Padj A vector or matrix of adjusted p-values. Note that adjusted
+% p-values are restricted to a maximum value of 1.
+%
+%
+% Jonathan Robinson, 2019-04-14
+
+
+% if DIM is not specified, act along 1st dimension (columns), unless P is a
+% vector, then act along the longest dimension.
+if nargin < 3
+ if all(size(P) > 1)
+ dim = 1;
+ else
+ [~,dim] = max(size(P));
+ end
+end
+
+% handle DIM input
+if ~isnumeric(dim) && strcmpi(dim,'all')
+ [nrows,ncols] = size(P);
+ P = P(:);
+ n = 1;
+else
+ if dim == 2
+ P = P';
+ end
+ n = size(P,2);
+end
+
+Padj = ones(size(P));
+for i = 1:n
+
+ p = P(:,i);
+ m = length(p);
+ padj = ones(size(p));
+
+ switch lower(method)
+
+ case 'bonferroni'
+
+ padj = p*m;
+
+ case 'holm'
+
+ [p,sort_ind] = sort(p); % sort p-values in ascending order
+ padj(1) = p(1)*m; % adjust first p-value
+
+ for j = 2:m % adjust all other p-values
+ padj(j) = max([p(j)*(m-j+1),padj(j-1)]);
+ end
+
+ % unsort p-values
+ [~,unsort_ind] = sort(sort_ind);
+ padj = padj(unsort_ind);
+
+ case 'benjamini'
+
+ [p,sort_ind] = sort(p); % sort p-values in ascending order
+ padj(m) = p(m); % last p-value is unadjusted
+
+ for j = m-1:-1:1 % adjust all other p-values
+ padj(j) = min([p(j)*(m/j),padj(j+1)]);
+ end
+
+ % unsort p-values
+ [~,unsort_ind] = sort(sort_ind);
+ padj = padj(unsort_ind);
+
+ otherwise
+
+ error('"%s" is not a valid adjustment method.\n Valid options are: "bonferroni", "holm", or "benjamini".',method);
+
+ end
+
+ padj(padj > 1) = 1; % cap adjusted p-values at 1
+ Padj(:,i) = padj;
+
+end
+
+% return Padj to original dimensions or orientation of input P.
+if ~isnumeric(dim) && strcmpi(dim,'all')
+ Padj = reshape(Padj,nrows,ncols);
+elseif dim == 2
+ Padj = Padj';
+end
+
diff --git a/code/modelCuration/addAAnewRxn20230518.m b/code/modelCuration/addAAnewRxn20230518.m
new file mode 100644
index 00000000..38a5f702
--- /dev/null
+++ b/code/modelCuration/addAAnewRxn20230518.m
@@ -0,0 +1,94 @@
+% This function is for adding new rxns annotated for amino acid genes of GPRs identified by GPT.
+rxnStruct = importTsvFile('../../data/modelCuration/addRxnAA_20230518.tsv');
+MetStruct = importTsvFile('../../data/modelCuration/addMetAA_20230518.tsv');
+
+model = importYaml('Human-GEM.yml');
+
+rxnsToAdd.rxns = rxnStruct.rxnID;
+rxnsToAdd.eccodes = rxnStruct.ECNumber;
+rxnsToAdd.equations = rxnStruct.Equation;
+rxnsToAdd.rxnNames = rxnStruct.rxnID;
+rxnsToAdd.lb = zeros(length(rxnStruct.rxnID),1);
+rxnsToAdd.ub = repmat(1000,length(rxnStruct.rxnID),1);
+idx = find(cell2mat(rxnStruct.Reversibility)== 1);
+rxnsToAdd.lb(idx) = -1000;
+rxnsToAdd.grRules = rxnStruct.grRules;
+rxnsToAdd.subSystems = rxnStruct.Subsystems;
+rxnsToAdd.rxnConfidenceScores = zeros(length(rxnStruct.rxnID),1);
+[~,idx] = ismember(MetStruct.MetID,model.mets);
+metsToAdd.mets = MetStruct.MetID(~idx,1);
+metsToAdd.metNames = MetStruct.Name(~idx,1);
+metsToAdd.compartments = MetStruct.Comp(~idx,1);
+metsToAdd.metFormulas = MetStruct.Fromula(~idx,1);
+metsToAdd.metCharges = MetStruct.Charge(~idx,1);
+tmp = [];
+for i = 1:length(metsToAdd.metCharges)
+ if ~isempty(metsToAdd.metCharges{i})
+ tmp(i,1) = str2double(metsToAdd.metCharges{i});
+ else
+ tmp(i,1) = NaN;
+ end
+end
+metsToAdd.metCharges = tmp;
+
+[newModel, modelChanges] = addMetabolicNetwork(model,rxnsToAdd,metsToAdd);
+
+% export the new mets, new reactions to the table
+structure = importTsvFile('../../model/metabolites.tsv');
+[~,idx] = ismember(modelChanges.mets.mets,MetStruct.MetID);
+MetStruct.emptyID(1:length(MetStruct.MetID),1) = {''};
+% metID metNames metFormulas metCharges compartments metKEGGID metPubChemID metChEBIID metMetaCycID metMetaNetXID
+metNocomp = cellfun(@(s) s(1:8), MetStruct.MetID(idx,1), 'UniformOutput', false);
+structure.mets = [structure.mets;MetStruct.MetID(idx,1)];
+structure.metBiGGID = [structure.metBiGGID;MetStruct.emptyID(idx,1)];
+structure.metKEGGID = [structure.metKEGGID;MetStruct.KEGG(idx,1)];
+structure.metsNoComp = [structure.metsNoComp;metNocomp];
+structure.metHMDBID = [structure.metHMDBID;MetStruct.emptyID(idx,1)];
+structure.metChEBIID = [structure.metChEBIID;MetStruct.CHEBI(idx,1)];
+structure.metPubChemID = [structure.metPubChemID;MetStruct.emptyID(idx,1)];
+structure.metLipidMapsID = [structure.metLipidMapsID;MetStruct.emptyID(idx,1)];
+structure.metEHMNID = [structure.metEHMNID;MetStruct.emptyID(idx,1)];
+structure.metHepatoNET1ID = [structure.metHepatoNET1ID;MetStruct.emptyID(idx,1)];
+structure.metRecon3DID = [structure.metRecon3DID;MetStruct.emptyID(idx,1)];
+structure.metMetaNetXID = [structure.metMetaNetXID;MetStruct.MetaNetx(idx,1)];
+structure.metHMR2ID = [structure.metHMR2ID;MetStruct.emptyID(idx,1)];
+structure.metRetired = [structure.metRetired;MetStruct.emptyID(idx,1)];
+% sort the order based on the model.mets
+[~,idx] = ismember(newModel.mets,structure.mets);
+structure.mets = structure.mets(idx);
+structure.metsNoComp = structure.metsNoComp(idx);
+structure.metBiGGID = structure.metBiGGID(idx,1);
+structure.metKEGGID = structure.metKEGGID(idx,1);
+structure.metHMDBID = structure.metHMDBID(idx,1);
+structure.metChEBIID = structure.metChEBIID(idx,1);
+structure.metPubChemID = structure.metPubChemID(idx,1);
+structure.metLipidMapsID = structure.metLipidMapsID(idx,1);
+structure.metEHMNID = structure.metEHMNID(idx,1);
+structure.metHepatoNET1ID = structure.metHepatoNET1ID(idx,1);
+structure.metRecon3DID = structure.metRecon3DID(idx,1);
+structure.metMetaNetXID = structure.metMetaNetXID(idx,1);
+structure.metHMR2ID = structure.metHMR2ID(idx,1);
+structure.metRetired = structure.metRetired(idx,1);
+exportTsvFile(structure, '../../model/metabolites.tsv')
+
+structure = importTsvFile('../../model/reactions.tsv');
+[~,idx] = ismember(modelChanges.rxns.rxns,rxnStruct.rxnID);
+rxnStruct.emptyID(1:length(rxnStruct.rxnID),1) = {''};
+structure.rxns = [structure.rxns;rxnStruct.rxnID(idx,1) ];
+structure.rxnKEGGID = [structure.rxnKEGGID;rxnStruct.KEGG(idx,1) ];
+structure.rxnBiGGID= [structure.rxnBiGGID;rxnStruct.BiGG(idx,1) ];
+structure.rxnEHMNID = [structure.rxnEHMNID;rxnStruct.emptyID(idx,1) ];
+structure.rxnHepatoNET1ID = [structure.rxnHepatoNET1ID;rxnStruct.emptyID(idx,1) ];
+structure.rxnREACTOMEID = [structure.rxnREACTOMEID;rxnStruct.Reactome(idx,1) ];
+structure.rxnRecon3DID = [structure.rxnRecon3DID;rxnStruct.emptyID(idx,1) ];
+structure.rxnMetaNetXID = [structure.rxnMetaNetXID;rxnStruct.MetaNetx(idx,1) ];
+structure.rxnHMR2ID = [structure.rxnHMR2ID;rxnStruct.emptyID(idx,1) ];
+structure.rxnRatconID = [structure.rxnRatconID;rxnStruct.emptyID(idx,1) ];
+structure.rxnTCDBID = [structure.rxnTCDBID;rxnStruct.emptyID(idx,1) ];
+structure.spontaneous = [structure.spontaneous;zeros(length(rxnStruct.rxnID(idx,1)),1) ];
+structure.rxnRheaID = [structure.rxnRheaID;rxnStruct.RHEA(idx,1) ];
+structure.rxnRheaMasterID = [structure.rxnRheaMasterID;rxnStruct.emptyID(idx,1) ];
+structure.rxnRetired = [structure.rxnRetired;rxnStruct.emptyID(idx,1) ];
+
+exportTsvFile(structure, '../../model/reactions.tsv')
+exportYaml(newModel, 'Human-GEM.yml');
diff --git a/code/test/memoteTest.py b/code/test/memoteTest.py
new file mode 100644
index 00000000..358ca3eb
--- /dev/null
+++ b/code/test/memoteTest.py
@@ -0,0 +1,18 @@
+import cobra
+import memote.support.basic
+
+if __name__ == "__main__":
+ try:
+ model = cobra.io.load_yaml_model("model/Human-GEM.yml")
+
+ # Use the MEMOTE way of testing
+ # https://github.com/opencobra/memote/blob/c8bd3fe75e2d955deaec824d1e93ebe60e754710/tests/test_for_support/test_for_basic.py#L908-L909
+ rxns, num = memote.support.basic.find_duplicate_reactions(model)
+ assert num == 0, "Duplicate reactions found: {}".format(rxns)
+
+ # Make sure all reactions have at least one metabolite
+ for r in model.reactions:
+ assert len(r.metabolites) > 0, "Reaction with no metabolite found: {}".format(r.id)
+ except AssertionError as e:
+ print(e)
+ exit(1)
\ No newline at end of file
diff --git a/code/test/sanityCheck.py b/code/test/sanityCheck.py
index f719cbdc..e3e7e9fe 100644
--- a/code/test/sanityCheck.py
+++ b/code/test/sanityCheck.py
@@ -39,8 +39,12 @@ def checkRxnAnnotation(rxns):
rxnList = get_column_from_tsv("model/reactions.tsv", "rxns")
spontaneous = get_column_from_tsv("model/reactions.tsv", "spontaneous", False)
rxnDeprecated = get_column_from_tsv("data/deprecatedIdentifiers/deprecatedReactions.tsv", "rxns")
- assert set(rxnList).isdisjoint(set(rxnDeprecated)), "Deprecated reaction reused!"
- assert rxnList == rxns, "Reaction annotation mismatch!"
+ rxnMisused = set(rxns).intersection(set(rxnDeprecated))
+ assert len(rxnMisused) == 0, "Deprecated reaction(s) used: {}".format(rxnMisused)
+ rxnMisused = set(rxns).difference(set(rxnList))
+ assert len(rxnMisused) == 0, "Reaction(s) not annotated in reactions.tsv: {}".format(rxnMisused)
+ rxnMisused = set(rxnList).difference(set(rxns))
+ assert len(rxnMisused) == 0, "Annotated reactions are missing from the model: {}".format(rxnMisused)
assert pd.api.types.is_numeric_dtype(spontaneous), "Spontaneous column should be in numeric!"
@@ -50,16 +54,22 @@ def checkMetAnnotation(mets):
"""
metList = get_column_from_tsv("model/metabolites.tsv", "mets")
metDeprecated = get_column_from_tsv("data/deprecatedIdentifiers/deprecatedMetabolites.tsv", "mets")
- assert set(metList).isdisjoint(set(metDeprecated)), "Deprecated metabolite reused!"
- assert metList == mets, "Metabolite annotation mismatch!"
-
+ metMisused = set(mets).intersection(set(metDeprecated))
+ assert len(metMisused) == 0, "Deprecated metabolite(s) used: {}".format(metMisused)
+ metMisused = set(mets).difference(set(metList))
+ assert len(metMisused) == 0, "Metabolite(s) not annotated in metabolites.tsv: {}".format(metMisused)
+ metMisused = set(metList).difference(set(mets))
+ assert len(metMisused) == 0, "Annotated metabolite(s) are missing from the model: {}".format(metMisused)
def checkGeneAnnotation(genes):
"""
check consistency of gene lists between model and annotation file
"""
geneList = get_column_from_tsv("model/genes.tsv", "genes")
- assert geneList == genes, "Gene annotation mismatch!"
+ geneMisused = set(genes).difference(set(geneList))
+ assert len(geneMisused) == 0, "Gene(s) not annotated in genes.tsv: {}".format(geneMisused)
+ geneMisused = set(geneList).difference(set(genes))
+ assert len(geneMisused) == 0, "Annotated gene(s) are missing from the model: {}".format(geneMisused)
def find_unused_entities(model, entity_type):
@@ -94,7 +104,7 @@ def checkUnusedEntities(model, entity_type):
# collect unused entites
unused_entities = find_unused_entities(model, entity_type)
- assert len(unused_entities) == 0, f"Found unused {{entity_type}}!"
+ assert len(unused_entities) == 0, f"Found unused {entity_type}: {unused_entities}"
def checkDupRxn(model):
diff --git a/code/test/testMetabolicTasks.m b/code/test/testMetabolicTasks.m
index f713b4f2..e8288809 100644
--- a/code/test/testMetabolicTasks.m
+++ b/code/test/testMetabolicTasks.m
@@ -10,7 +10,8 @@
%
if nargin < 1
- error('Task type is missing!');
+ disp('::error::Task type is missing!');
+ exit(1)
end
% Get model path
@@ -28,7 +29,8 @@
elseif taskType == "verification"
taskFile=fullfile(modelPath,'data','metabolicTasks','metabolicTasks_VerifyModel.txt');
else
- error('Unknown task type is provided.');
+ warning('::error::Unknown task type is provided.');
+ exit(1)
end
verificationTasks = parseTaskList(taskFile);
@@ -38,6 +40,6 @@
fprintf('Suceeded with %s tasks.\n', taskType)
status = 1;
else
- error('Failed in %s tasks.', taskType);
+ warning('::error::Failed in %s tasks.', taskType);
+ exit(1)
end
-
diff --git a/code/test/testYamlConversion.m b/code/test/testYamlConversion.m
index 532f81b2..463de479 100644
--- a/code/test/testYamlConversion.m
+++ b/code/test/testYamlConversion.m
@@ -2,38 +2,40 @@
% test the functions for yaml import/export see if the conversion process
% changes the model content
%
-% Usage: status = testYamlConversion
-%
-
% Get model path
[ST, I]=dbstack('-completenames');
modelPath=fileparts(fileparts(fileparts(ST(I).file)));
-% Import yaml model
-ymlFile=fullfile(modelPath,'model','Human-GEM.yml');
-model = importYaml(ymlFile, true);
+% export to yml and then import back
+try
-% make sure there is no intermediate Yaml file under the current folder
-warning('off', 'MATLAB:DELETE:FileNotFound')
-if exist('testYamlConversion.yml','file')
- delete testYamlConversion.yml;
-end
+ % Import yaml model
+ ymlFile=fullfile(modelPath,'model','Human-GEM.yml');
+ model = importYaml(ymlFile, true);
+ % make sure there is no intermediate Yaml file under the current folder
+ warning('off', 'MATLAB:DELETE:FileNotFound')
+ if exist('testYamlConversion.yml','file')
+ delete testYamlConversion.yml;
+ end
-% export to yml and then import back
-exportYaml(model,'testYamlConversion.yml');
-importedHumanGEM = importYaml('testYamlConversion.yml', true);
-
-% remove intermediate Yaml file
-delete testYamlConversion.yml;
-
-% compare the imported model from yaml with the original one
-if isequal(model, importedHumanGEM)
- % model conversion between Matlab and Yaml files is successful
- disp('The conversion was successful.')
- status = 1;
-else
- error('There are problems during the conversion between Matlab and Yaml files');
+ exportYaml(model,'testYamlConversion.yml');
+ importedHumanGEM = importYaml('testYamlConversion.yml', true);
+
+ % remove intermediate Yaml file
+ delete testYamlConversion.yml;
+
+ % compare the imported model from yaml with the original one
+ if ~isequal(model, importedHumanGEM)
+ warning('::error::Re-imported model is diffrent from export');
+ exit(1);
+ end
+catch
+ warning('::error::There are problems during the conversion import and export');
+ exit(1)
end
+% model conversion between Matlab and Yaml files is successful
+disp('The conversion was successful.')
+exit(0)
\ No newline at end of file
diff --git a/code/updateAnimalGEM.m b/code/updateAnimalGEM.m
index f10633e3..5ce90e94 100644
--- a/code/updateAnimalGEM.m
+++ b/code/updateAnimalGEM.m
@@ -1,4 +1,4 @@
-function [animalGEM, speciesSpecNetwork, gapfillNetwork]=updateAnimalGEM(orthologPairs,rxnsToAdd,metsToAdd,modelId)
+function [animalGEM, speciesSpecNetwork, gapfillNetwork]=updateAnimalGEM(orthologPairs,rxnsToAdd,metsToAdd,modelId,resetBiomass)
% updateAnimalGEM
% Generate a model by using the Human-GEM as a template and taking into
% account species-specific pathways/reactions
@@ -11,7 +11,9 @@
% rxnsToAdd the structure of species-specific reactions
% metsToAdd the structure of species-specific metabolites
% modelId model id
-%
+% resetBiomass reset biomass objective function to "biomass_components"
+% which is constituted by generic componenets that
+% suppose to occur in a eukaryotic cell (opt, default TRUE)
%
% Output:
% animalGEM an updated animal GEM
@@ -81,7 +83,8 @@
%% Gap-filling
-[animalGEM, gapfillNetwork]=gapfill4EssentialTasks(animalGEM,ihuman);
+[animalGEM, gapfillNetwork]=gapfill4EssentialTasks(animalGEM,ihuman,resetBiomass);
+animalGEM.b = animalGEM.b(:,1); % ensure b field in single column
%% post-gapfilling procedures
diff --git a/data/datasets/Hart2015_RNAseq.txt b/data/datasets/Hart2015_RNAseq.txt
new file mode 100755
index 00000000..c8ce2005
--- /dev/null
+++ b/data/datasets/Hart2015_RNAseq.txt
@@ -0,0 +1,18688 @@
+gene DLD1 GBM HCT116 HELA RPE1
+ENSG00000000005 0 0 0.00175748 0 0.003942802
+ENSG00000000419 73.99609624 55.64200255 85.01811992 91.89560925 59.07545522
+ENSG00000000457 8.473393708 6.600141504 8.113659435 5.094200235 4.762529109
+ENSG00000000460 17.21192885 9.752812117 14.93408127 19.96829232 21.44774103
+ENSG00000000938 0.001624506 0.003561993 0.025982622 0.143149445 0.001026447
+ENSG00000000971 0.002432291 1.086670999 0.027588792 72.24505596 26.62994881
+ENSG00000001036 126.9845265 43.8034057 53.42903373 90.9448662 111.637952
+ENSG00000001084 53.49218916 19.51082688 69.63031843 46.25610671 18.72100791
+ENSG00000001167 26.13297727 47.96880932 25.02164421 14.82612861 23.998563
+ENSG00000001460 9.120640155 4.609895797 8.423665257 3.290589342 16.53455031
+ENSG00000001461 22.21777216 15.06150494 11.68142471 14.20151426 84.95425314
+ENSG00000001497 50.85203795 36.65278085 42.5017608 83.56856543 36.99446344
+ENSG00000001561 8.9948508 0.051551891 9.847852166 0.061479997 1.545431922
+ENSG00000001617 26.59005655 70.58086826 12.45156965 85.44339555 75.14349528
+ENSG00000001626 12.63931756 0.002432008 0.002630243 1.200139905 0.001369273
+ENSG00000001629 41.35896962 58.97901925 22.81678159 30.19410297 36.86641308
+ENSG00000001630 62.74030608 202.4546254 41.829323 37.41135621 41.8836531
+ENSG00000001631 46.14770183 57.40551197 41.65566039 47.26128705 38.32624253
+ENSG00000002016 24.51751338 26.25570033 27.17430682 15.59681123 16.42021957
+ENSG00000002330 20.04997763 37.78843632 24.93502539 66.01784492 31.95860018
+ENSG00000002549 67.80634895 44.10821286 69.24519379 50.0613683 30.8266016
+ENSG00000002586 65.58694675 154.0668694 41.94549996 147.9595762 103.2262248
+ENSG00000002587 6.41771284 13.704868 48.62118174 0.252791431 0.96020047
+ENSG00000002745 0.63299725 1.998783325 64.74158951 0.750658438 0.231652615
+ENSG00000002746 0.883626497 3.066935591 5.552579451 6.585569641 0.000863658
+ENSG00000002822 33.707559 41.32474825 36.31179306 18.9555891 30.42305918
+ENSG00000002834 165.7140215 71.02266818 107.6907553 67.54585692 222.5204305
+ENSG00000002919 25.11998304 16.73705226 21.46575997 15.09615823 21.4924224
+ENSG00000002933 0 0 0.005847449 0.051756166 0
+ENSG00000003056 283.1868197 170.0045207 244.1899316 361.5848041 278.9410481
+ENSG00000003096 0.007445059 30.86098849 3.457832981 38.14497773 11.0630251
+ENSG00000003137 21.1647275 4.234572726 17.55423094 1.894833781 2.583588084
+ENSG00000003147 45.54371875 0.181604955 22.70627136 1.002017871 0.386173388
+ENSG00000003249 19.39333918 24.51317772 52.76637873 6.613110051 15.23465134
+ENSG00000003393 14.13344948 38.07780343 11.10433242 12.62038446 24.98372472
+ENSG00000003400 8.797180001 1.24227335 1.187826048 3.917494544 0.00153664
+ENSG00000003402 51.24137113 45.53786164 26.04867088 35.44120245 22.92465213
+ENSG00000003436 7.508822339 350.0727885 20.73406011 183.6865753 66.83516512
+ENSG00000003756 158.5226826 209.885621 153.8957208 129.5196968 143.8811044
+ENSG00000003987 0.923790215 0.473548533 0.632002012 0.974686977 0.836048979
+ENSG00000003989 17.3437887 17.69243494 3.683916745 39.76579884 0.000517976
+ENSG00000004059 239.2864982 242.2708036 298.3528118 174.1386447 152.8257011
+ENSG00000004139 13.73699073 5.979699987 0.320799718 11.23059844 13.93009236
+ENSG00000004142 76.07686466 48.94318025 72.78941884 88.51870325 96.24557947
+ENSG00000004399 6.46246413 27.295628 38.35644671 36.51412687 59.73446041
+ENSG00000004455 346.7195598 148.5089717 194.3937216 305.5307115 168.8687691
+ENSG00000004468 0.029464131 3.70715426 0.01459832 0.002596592 0.005314224
+ENSG00000004478 101.0175147 65.08137858 99.85309556 181.9124709 48.31481875
+ENSG00000004487 97.23829297 64.18512595 49.85007357 119.1806107 50.92916216
+ENSG00000004534 48.67851301 85.94094487 54.55199804 66.01784492 43.21120283
+ENSG00000004660 10.1077127 2.52964982 3.712224293 17.63563992 3.116661431
+ENSG00000004700 60.30917792 54.53432115 29.65567172 53.50745492 65.23283354
+ENSG00000004766 23.01781134 12.93761404 17.3725105 27.60950814 21.25519184
+ENSG00000004776 0.260190015 102.3469403 0.343132458 0.099204677 0.139343322
+ENSG00000004777 14.45080496 14.61866543 33.45887035 2.849709866 24.0986494
+ENSG00000004779 226.8492116 143.8479031 231.3374645 227.4076083 113.432265
+ENSG00000004799 1.100091425 0.029636929 2.017466119 63.63574838 0.117960848
+ENSG00000004809 0.003879378 0.217211567 0.005260809 0.002386735 0.001203408
+ENSG00000004838 2.431967574 1.055698357 2.513313522 1.77636846 2.927138889
+ENSG00000004846 0.001948353 0.066727362 0.013428389 0.020255553 0.074505332
+ENSG00000004848 0.442538455 0.009568402 0.239233731 0 0
+ENSG00000004864 37.50654269 20.48177238 11.33796479 55.20346163 22.09713797
+ENSG00000004866 21.62477864 16.3127893 13.15323571 38.86601157 26.81529384
+ENSG00000004897 100.2501006 63.08214189 157.7846094 96.3986273 154.5302166
+ENSG00000004939 0.028154378 0.000380595 0.00539894 0.001396672 0.000517976
+ENSG00000004948 0 0.045762297 0.06936751 0.00068793 0.000347635
+ENSG00000004961 28.87771048 21.41167787 21.21413156 62.41216886 36.56089684
+ENSG00000004975 41.70455372 59.22489498 62.14676121 45.24090959 40.54060871
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+ENSG00000272047 4.222724512 6.627725997 3.73294759 3.54319787 7.282922209
+ENSG00000272325 12.19975435 28.67348905 13.51405332 11.57909536 12.4833019
+ENSG00000272373 16.47579672 2.912652783 17.9607292 11.77371234 8.304733139
+ENSG00000272414 15.65120401 1.294912547 8.745494474 4.067772158 13.74761464
+ENSG00000272573 0.132023962 0.354085409 0.302707558 0.404845851 0.120703637
+ENSG00000272636 0.000489623 0 6.201227823 0.001263208 0.000517976
+ENSG00000272658 0 0 0 0.783501328 0
+ENSG00000272781 0.00502334 0.006195504 0.033294266 0.002596592 0.185226297
+ENSG00000272962 4.296819324 32.64432281 2.241681739 1.59085923 2.14718582
+ENSG00000272987 0 0 0 0 0
+ENSG00000273025 0.007924834 0.001682332 0.008182226 0 0
+ENSG00000273079 1.538577142 0.395797272 2.092045121 0.000818194 0.0042813
+ENSG00000273085 0 0 0 0 0
+ENSG00000273155 0.910206968 1.364051819 2.400272727 1.00986111 1.490114714
+ENSG00000273170 0.600966074 7.094897736 2.284305569 1.734464612 0.351422101
+ENSG00000273173 0 335.3462646 0 155.6401217 84.19202281
+ENSG00000273266 0.177757623 0.216069475 0.043957085 0.451038792 0
+ENSG00000273274 0 0.073116291 0.351155833 0.001163595 0.001369273
+ENSG00000273291 0.001137537 6.067652454 0.236434196 0 0.001369273
+ENSG00000273331 0.287721309 0.431440318 1.154945691 0.111538205 0.040227784
+ENSG00000273439 7.545422617 6.282288769 4.018660957 3.457728654 3.254271855
+ENSGR0000002586 65.58694675 154.0668694 41.94549996 147.9595762 103.2262248
+ENSGR0000124333 19.52834309 12.79471728 17.77480421 37.20435198 20.77413479
+ENSGR0000124334 0.170891745 0 0.013292732 0 0
+ENSGR0000167393 6.368843372 19.34905818 3.988025831 10.43341964 18.5786801
+ENSGR0000168939 0.363716516 0.124305494 0.141653636 0.431424146 0.163483474
+ENSGR0000169084 3.949838423 14.10047456 2.721170175 10.50614797 13.0956892
+ENSGR0000169093 6.616959801 9.578288166 12.40843999 8.249518228 6.066393432
+ENSGR0000169100 105.4540992 237.2845568 131.4878776 155.1015691 177.8806952
+ENSGR0000178605 17.31973934 19.4972947 10.46089406 12.96682423 24.35069408
+ENSGR0000182162 0.002265297 0.0022566 0.006568468 0.002386735 0.001718575
+ENSGR0000182378 10.14286032 18.0020209 7.891391799 10.77218385 11.62195801
+ENSGR0000185291 0.162155045 0.56466836 0.057541826 0.072737434 0.375961827
+ENSGR0000185960 0 0.001123767 0.007744362 0.003344993 0.001369273
+ENSGR0000196433 0.004372065 0.123711803 0.014883025 0.007662886 0.005485937
+ENSGR0000197976 8.988606991 15.03017903 9.181017236 6.923735992 10.45807258
+ENSGR0000198223 0.017488205 0.531669525 0.951301957 0.516980716 0.033221021
+ENSGR0000205755 0.001137537 0.023054104 0.167141461 0.097776193 0.038197536
+ENSGR0000214717 3.900663164 3.974574894 4.233879851 9.162269387 8.310503408
diff --git a/data/datasets/Hart2015_TableS2.xlsx b/data/datasets/Hart2015_TableS2.xlsx
new file mode 100755
index 00000000..b86693ed
Binary files /dev/null and b/data/datasets/Hart2015_TableS2.xlsx differ
diff --git a/data/deprecatedIdentifiers/deprecatedMetabolites.tsv b/data/deprecatedIdentifiers/deprecatedMetabolites.tsv
index 58f28f5e..4feb5339 100644
--- a/data/deprecatedIdentifiers/deprecatedMetabolites.tsv
+++ b/data/deprecatedIdentifiers/deprecatedMetabolites.tsv
@@ -2197,3 +2197,55 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02662c" "MAM02662" "" "C05379" "" "CHEBI:7815" "972" "" "" "HC01434" "HC01434" "MNXM1289" "m02662c" "m02662c"
"MAM02662m" "MAM02662" "" "C05379" "" "CHEBI:7815" "972" "" "" "HC01434" "HC01434" "MNXM1289" "m02662m" "m02662m"
"MAM02662x" "MAM02662" "" "C05379" "" "CHEBI:7815" "972" "" "" "HC01434" "HC01434" "MNXM1289" "m02662p" "m02662p"
+"MAM01421c" "MAM01421" "h2co3" "C01353" "" "CHEBI:28976" "" "" "" "HC02169" "h2co3" "MNXM60" "m01421c" "m01421c"
+"MAM01421m" "MAM01421" "h2co3" "C01353" "" "CHEBI:28976" "" "" "" "HC02169" "h2co3" "MNXM60" "m01421m" "m01421m"
+"MAM01421e" "MAM01421" "h2co3" "C01353" "" "CHEBI:28976" "" "" "" "HC02169" "h2co3" "MNXM60" "m01421s" "m01421s"
+"MAM03573m" "MAM03573" "etfox" "" "" "" "" "" "" "" "etfox" "MNXM11479" "" "etfox_m"
+"MAM03574m" "MAM03574" "etfrd" "" "" "" "" "" "" "" "etfrd" "MNXM11480" "" "etfrd_m"
+"MAM03494c" "MAM03494" "c3dc" "" "" "" "22833583" "" "" "" "c3dc" "" "" "c3dc_c"
+"MAM03494e" "MAM03494" "c3dc" "" "" "" "22833583" "" "" "" "c3dc" "" "" "c3dc_s"
+"MAM03318e" "MAM03318" "C02528" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "" "" "" "C02528" "MNXM1183" "" "C02528_s"
+"MAM03318c" "MAM03318" "C02528" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "" "" "" "C02528" "MNXM1183" "" "C02528_c"
+"MAM03318r" "MAM03318" "C02528" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "" "" "" "C02528" "MNXM1183" "" "C02528_r"
+"MAM03318m" "MAM03318" "C02528" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "" "" "" "C02528" "MNXM1183" "" "C02528_m"
+"MAM03325c" "MAM03325" "C08276" "C08276" "HMDB0001527" "CHEBI:1438" "563" "" "" "" "C08276" "MNXM2782" "" "C08276_c"
+"MAM00591c" "MAM00591" "" "C14748" "" "CHEBI:34306" "" "" "" "HC02179" "" "MNXM6760" "m00591c" "m00591c"
+"MAM00591e" "MAM00591" "" "C14748" "" "CHEBI:34306" "" "" "" "HC02179" "" "MNXM6760" "m00591s" "m00591s"
+"MAM03162c" "MAM03162" "" "C05578" "" "CHEBI:27404" "" "" "" "" "M03162" "MNXM2336" "m03162c" "m03162c"
+"MAM03231c" "MAM03231" "" "" "" "CHEBI:57277" "" "" "" "" "3hppa" "" "" "3hppa_c"
+"MAM03540c" "MAM03540" "ddeccrn" "" "" "" "168381" "" "" "" "ddeccrn" "" "" "ddeccrn_c"
+"MAM03540e" "MAM03540" "ddeccrn" "" "" "" "168381" "" "" "" "ddeccrn" "" "" "ddeccrn_s"
+"MAM03226m" "MAM03226" "3hibutcoa" "C04047" "" "CHEBI:15481" "" "" "" "" "3hibutcoa" "MNXM446" "" "3hibutcoa_m"
+"MAM03884c" "MAM03884" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "" "" "" "phyt" "MNXM91275" "" "phyt_c"
+"MAM03884e" "MAM03884" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "" "" "" "phyt" "MNXM91275" "" "phyt_s"
+"MAM03554c" "MAM03554" "dmnoncoa" "" "" "" "" "" "" "" "dmnoncoa" "MNXM6100" "" "dmnoncoa_c"
+"MAM03884x" "MAM03884" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "" "" "" "phyt" "MNXM91275" "" "phyt_p"
+"MAM03354c" "MAM03354" "CE4837" "C16171" "HMDB0006516" "CHEBI:63548" "53477846" "" "CE4837" "" "CE4837" "MNXM165171" "" "CE4837_c"
+"MAM03332c" "MAM03332" "CE2516" "C03242" "HMDB0002925" "CHEBI:53486" "5280581" "" "CE2516" "" "CE2516" "MNXM5607" "" "CE2516_c"
+"MAM03332e" "MAM03332" "" "C03242" "HMDB0002925" "CHEBI:53486" "5280581" "" "CE2516" "" "CE2516" "" "" "CE2516_s"
+"MAM03354r" "MAM03354" "CE4837" "C16171" "HMDB0006516" "CHEBI:63548" "53477846" "" "CE4837" "" "CE4837" "MNXM165171" "" "CE4837_r"
+"MAM00029c" "MAM00029" "" "" "" "CHEBI:81563" "16061126" "LMFA03070025" "CE7090" "" "CE7090" "MNXM33782" "m00029c" "m00029c"
+"MAM03368m" "MAM03368" "" "C05467" "HMDB0006891" "CHEBI:27379" "440690" "" "CE5169" "" "CE5169" "" "" "CE5169_m"
+"MAM03368x" "MAM03368" "" "C05467" "HMDB0006891" "CHEBI:27379" "440690" "" "CE5169" "" "CE5169" "" "" "CE5169_p"
+"MAM00902c" "MAM00902" "" "" "" "" "" "" "CE4820" "" "CE4820" "MNXM164259" "m00902c" "m00902c"
+"MAM00616m" "MAM00616" "cholcoar" "C15613" "" "CHEBI:37642" "15942889" "LMST01010218" "CE5165" "HC01348" "cholcoar" "MNXM549;MNXM90922;MNXM91096" "m00616p" "m00616p"
+"MAM00749m" "MAM00749" "cholcoads" "C05460" "HMDB0006889" "CHEBI:27505" "5280797" "LMST01010217" "" "HC01466" "cholcoads" "MNXM162945;MNXM2747" "m00749m" "m00749m"
+"MAM00036m" "MAM00036" "" "C05450" "" "CHEBI:52050" "46224537" "" "CE5168" "" "HC01459" "MNXM732;MNXM827" "m00036m" "m00036m"
+"MAM00748m" "MAM00748" "cholcoaone" "C05467" "HMDB0006891" "CHEBI:27379" "440690" "LMST01010216" "CE5169" "HC01473" "cholcoaone" "MNXM162946;MNXM873" "m00748m" "m00748m"
+"MAM03367m" "MAM03367" "" "" "" "" "" "" "CE5168" "" "CE5168" "" "" "CE5168_m"
+"MAM00618m" "MAM00618" "cholcoas" "C17343" "" "CHEBI:37643" "15942888" "" "CE5166" "" "CE5166;cholcoas" "MNXM1201;MNXM8131" "m00618m" "m00618m"
+"MAM01445m" "MAM01445" "cholate" "C00695" "HMDB0000619" "CHEBI:16359" "221493" "LMST04010001" "" "HC00502" "cholate" "MNXM450" "m01445m" "m01445m"
+"MAM01514m" "MAM01514" "cholcoa" "C01794" "HMDB0001374" "CHEBI:15519" "439573" "" "" "HC00844" "cholcoa" "MNXM162468;MNXM431" "m01514m" "m01514m"
+"MAM00759c" "MAM00759" "" "C13712" "" "" "" "LMST02030130" "" "" "M00759" "MNXM3494" "m00759c" "m00759c"
+"MAM02397c" "MAM02397" "" "C16239" "" "" "" "" "" "" "M02397" "MNXM19093" "m02397c" "m02397c"
+"MAM01268c" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268c" "m01268c"
+"MAM01268m" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268m" "m01268m"
+"MAM01268n" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268n" "m01268n"
+"MAM01268x" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268p" "m01268p"
+"MAM01268r" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268r" "m01268r"
+"MAM01268e" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268s" "m01268s"
+"MAM02757c" "MAM02757" "" "" "" "" "" "" "" "" "M02757" "" "m02757c" "m02757c"
+"MAM02757l" "MAM02757" "" "" "" "" "" "" "" "" "M02757" "" "m02757l" "m02757l"
+"MAM02757n" "MAM02757" "" "" "" "" "" "" "" "" "M02757" "" "m02757n" "m02757n"
+"MAM01816n" "MAM01816" "" "" "" "" "" "PROTEIN" "" "" "M01816" "" "m01816n" "m01816n"
+"MAM00926c" "MAM00926" "4aphdob" "C01252" "HMDB0000978" "CHEBI:17442" "472" "" "" "" "4aphdob" "MNXM163204" "m00926c" "m00926c"
diff --git a/data/deprecatedIdentifiers/deprecatedReactions.tsv b/data/deprecatedIdentifiers/deprecatedReactions.tsv
index 81645ebf..5c0e7745 100644
--- a/data/deprecatedIdentifiers/deprecatedReactions.tsv
+++ b/data/deprecatedIdentifiers/deprecatedReactions.tsv
@@ -92,3 +92,158 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR08992" "" "RPEc" "" "" "" "RPEc" "" "" "" "" 0 "" "" "RPEc"
"MAR20045" "R06983" "FALDH2;R_FALDH2;R_r1378;r1378" "" "" "" "" "MNXR146812" "" "" "" 0 "RHEA:19985" "" ""
"MAR20004" "R08382" "RDH2;R_RDH2" "" "" "" "" "MNXR103441" "" "" "" 0 "RHEA:42052" "" ""
+"MAR05295" "" "" "" "r1110" "" "NaKt" "" "HMR_5295" "RCR41002" "" 0 "" "" "HMR_5295"
+"MAR06895" "" "GLCSGLT1le" "" "" "" "GLCSGLT1le" "MNXR100225" "" "" "" 0 "" "" "GLCSGLT1le"
+"MAR06894" "" "GALSGLT1le" "" "" "" "GALSGLT1le" "MNXR100011" "" "" "" 0 "" "" "GALSGLT1le"
+"MAR05406" "R00132" "H2CO3D" "" "r1417" "" "H2CO3D" "MNXR100482" "HMR_5406" "RCR14126" "" 0 "" "RHEA:10748" "HMR_5406"
+"MAR05409" "" "" "" "r1420" "" "HMR_5409" "" "HMR_5409" "RCR30285" "" 0 "" "" "HMR_5409"
+"MAR08751" "R00132" "H2CO3Dm" "" "" "" "H2CO3Dm" "MNXR100482" "HMR_8751" "RCR14130" "" 0 "" "RHEA:10748" "HMR_8751"
+"MAR13066" "" "EX_h2co3_e" "" "" "" "EX_h2co3[e]" "MNXR98639" "" "" "" 0 "" "" "EX_h2co3[e]"
+"MAR05413" "" "PIt2r" "" "" "" "PIt6b" "MNXR102872" "HMR_5413" "RCR41023" "" 0 "RHEA:29941" "RHEA:29939" "HMR_5413"
+"MAR04411" "" "PIt8" "" "" "" "PIt8" "MNXR102875" "HMR_4911" "RCR40976" "" 0 "" "" "PIt8"
+"MAR08749" "" "H2CO3D2" "" "" "" "HMR_8749" "MNXR100483" "HMR_8749" "RCR14128" "" 1 "" "" "HMR_8749"
+"MAR08750" "" "H2CO3D2m" "" "" "" "HMR_8750" "MNXR100483" "HMR_8750" "RCR14129" "" 1 "" "" "HMR_8750"
+"MAR02035" "" "r0310" "" "" "" "r0310" "" "" "" "" 0 "" "" "r0310"
+"MAR03211" "R00924" "" "" "r0683" "" "r0683" "MNXR103101" "HMR_3211" "RCR14348" "" 0 "" "" "HMR_3211"
+"MAR03751" "R02660" "" "R02660M" "r0560" "" "r0560" "" "HMR_3751" "RCR14421" "" 0 "" "" "HMR_3751"
+"MAR03783" "R03172" "" "R03172M" "r0603" "" "r0603" "MNXR108000" "HMR_3783" "RCR14424" "" 0 "" "" "HMR_3783"
+"MAR04242" "R02487" "" "R02487M" "r0541" "" "r0541" "MNXR100293" "HMR_4242" "RCR14356" "" 0 "" "RHEA:30847" "HMR_4242"
+"MAR03769" "R04095" "" "R04095M" "r0655" "" "r0655" "MNXR95318" "HMR_3769" "RCR14423" "" 0 "" "" "HMR_3769"
+"MAR03838" "" "" "" "r1453" "" "" "" "HMR_3838" "RCR14286" "" 0 "" "" "HMR_3838"
+"MAR02366" "" "r1446" "" "" "" "r1446" "" "" "" "" 0 "" "" "r1446"
+"MAR02367" "" "r1447" "" "" "" "r1447" "" "" "" "" 0 "" "" "r1447"
+"MAR02370" "" "r1449" "" "" "" "r1449" "" "" "" "" 0 "" "" "r1449"
+"MAR02372" "" "r1450" "" "" "" "r1450" "" "" "" "" 0 "" "" "r1450"
+"MAR02373" "" "r1451" "" "" "" "r1451" "" "" "" "" 0 "" "" "r1451"
+"MAR00483" "R00849" "" "" "r0205" "" "r0205" "MNXR106713" "HMR_0483" "RCR21050" "" 0 "" "RHEA:18977" "HMR_0483"
+"MAR08743" "R00408" "SUCD1m" "" "" "" "SUCD1m" "MNXR99636" "HMR_8743" "RCR11674" "" 0 "" "RHEA:30343" "HMR_8743"
+"MAR05294" "R00362" "" "R00362C" "r1109" "" "r1109" "MNXR96731" "HMR_5294" "RCR11670" "" 0 "RHEA:10761" "RHEA:10760" "HMR_5294"
+"MAR11421" "" "CITL" "" "" "" "CITL" "MNXR96731" "" "" "" 0 "RHEA:10761" "RHEA:10760" "CITL"
+"MAR00562" "" "ETF" "" "" "" "ETF" "MNXR97965" "" "" "" 0 "" "" "ETF"
+"MAR00563" "" "ETFQO" "" "" "" "ETFQO" "MNXR97966" "" "" "" 0 "" "" "ETFQO"
+"MAR05434" "" "FAOXC3DC" "" "" "" "FAOXC3DC" "" "" "" "" 0 "" "" "FAOXC3DC"
+"MAR04156" "R00742" "ACCOAC" "R00742C" "r0184" "" "ACCOAC" "MNXR95219" "HMR_4156" "RCR10617" "" 0 "RHEA:11309" "RHEA:11308" "HMR_4156"
+"MAR02369" "" "r1448" "" "" "" "r1448" "" "" "" "" 0 "" "" "r1448"
+"MAR02185" "" "" "" "" "" "r0701" "" "" "" "" 0 "" "" "r0701"
+"MAR11649" "" "" "" "" "" "PAIL_hs_t1e" "" "" "" "" 0 "" "" "PAIL_hs_t1e"
+"MAR11729" "" "" "" "" "" "2HXIC_Lt2e" "" "" "" "" 0 "" "" "2HXIC_Lt2e"
+"MAR10469" "" "" "" "" "" "3HCINNMsec" "" "" "" "" 0 "" "" "3HCINNMsec"
+"MAR10467" "" "" "" "" "" "PCSup" "" "" "" "" 0 "" "" "PCSup"
+"MAR10471" "" "" "" "" "" "3HPPAsec" "" "" "" "" 0 "" "" "3HPPAsec"
+"MAR01823" "" "VITD3tm3" "" "" "" "VITD3tm3" "MNXR105203" "" "" "" 0 "" "" "VITD3tm3"
+"MAR11988" "" "" "" "" "" "HC00005t1e" "" "" "" "" 0 "" "" "HC00005t1e"
+"MAR11991" "" "" "" "" "" "HC00006t1e" "" "" "" "" 0 "" "" "HC00006t1e"
+"MAR11994" "" "" "" "" "" "HC00007t1e" "" "" "" "" 0 "" "" "HC00007t1e"
+"MAR11997" "" "" "" "" "" "HC00008t1e" "" "" "" "" 0 "" "" "HC00008t1e"
+"MAR12000" "" "" "" "" "" "HC00009t1e" "" "" "" "" 0 "" "" "HC00009t1e"
+"MAR11652" "" "" "" "" "" "PAILSTE_HSt1e" "" "" "" "" 0 "" "" "PAILSTE_HSt1e"
+"MAR11650" "" "" "" "" "" "PAILR_HSt1e" "" "" "" "" 0 "" "" "PAILR_HSt1e"
+"MAR11725" "" "" "" "" "" "SPHMYLN1824_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN1824_hs_t1"
+"MAR11697" "" "" "" "" "" "SPHMYLN180241_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN180241_hs_t1"
+"MAR11727" "" "" "" "" "" "SPHMYLN1825_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN1825_hs_t1"
+"MAR11699" "" "" "" "" "" "SPHMYLN18114_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18114_hs_t1"
+"MAR11701" "" "" "" "" "" "SPHMYLN18115_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18115_hs_t1"
+"MAR11703" "" "" "" "" "" "SPHMYLN18116_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18116_hs_t1"
+"MAR11705" "" "" "" "" "" "SPHMYLN181161_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181161_hs_t1"
+"MAR11707" "" "" "" "" "" "SPHMYLN18117_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18117_hs_t1"
+"MAR11709" "" "" "" "" "" "SPHMYLN18118_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18118_hs_t1"
+"MAR11711" "" "" "" "" "" "SPHMYLN181181_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181181_hs_t1"
+"MAR11713" "" "" "" "" "" "SPHMYLN18120_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18120_hs_t1"
+"MAR11715" "" "" "" "" "" "SPHMYLN181201_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181201_hs_t1"
+"MAR11717" "" "" "" "" "" "SPHMYLN18121_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18121_hs_t1"
+"MAR11719" "" "" "" "" "" "SPHMYLN18122_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18122_hs_t1"
+"MAR11721" "" "" "" "" "" "SPHMYLN181221_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181221_hs_t1"
+"MAR11723" "" "" "" "" "" "SPHMYLN18123_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18123_hs_t1"
+"MAR11651" "" "" "" "" "" "PAILPALM_HSt1e" "" "" "" "" 0 "" "" "PAILPALM_HSt1e"
+"MAR20015" "R02549" "ABUTD;ABUTDm;R_ABUTD;R_ABUTDm" "" "" "" "" "MNXR95191" "" "" "" 0 "RHEA:19105" "" ""
+"MAR20014" "R03283" "R_TMABADH;TMABADH" "" "" "" "" "MNXR104876" "" "" "" 0 "RHEA:17985" "" ""
+"MAR20052" "" "ALDD21;RE3076X;R_ALDD21;R_RE3076X" "" "" "" "" "MNXR95747" "" "" "" 0 "RHEA:44016" "" ""
+"MAR02358" "" "" "" "" "" "r1433" "" "" "" "" 0 "" "" "r1433"
+"MAR20066" "R00009" "CAT;CATm;CATp;CATpp;CATr;R_CAT;R_CATm;R_CATp;R_CATpp;R_CATr" "" "" "" "" "MNXR96455" "" "" "" 0 "RHEA:20309" "" ""
+"MAR20020" "R00303" "G6PP;G6PPer;R_G6PP;R_G6PPer" "" "" "" "" "MNXR195425" "" "" "" 0 "RHEA:16689" "" ""
+"MAR20002" "R02124" "HMR_6633;RDH1;R_HMR_6633;R_RDH1;R_TRETINOLOR1;TRETINOLOR1" "" "" "" "" "MNXR189842" "" "" "" 0 "RHEA:21284" "" ""
+"MAR00030" "" "" "" "" "" "HMR_0030" "" "HMR_0030" "RCR20227" "" 0 "" "" "HMR_0030"
+"MAR05310" "" "GLNtN1" "" "" "" "GLNtN1" "MNXR100263" "HMR_5310" "RCR41006" "" 0 "" "" "HMR_5310"
+"MAR00032" "" "" "" "" "" "HMR_0032" "" "HMR_0032" "RCR14836" "" 0 "" "" "HMR_0032"
+"MAR02276" "" "r0993" "" "" "" "r0993" "MNXR105414" "" "" "" 0 "" "" "r0993"
+"MAR02277" "" "r0994" "" "" "" "r0994" "MNXR105415" "" "" "" 0 "" "" "r0994"
+"MAR02384" "" "r1495" "" "" "" "r1495" "MNXR105478" "" "" "" 0 "" "" "r1495"
+"MAR02390" "" "r2157" "" "" "" "r2157" "MNXR106054" "" "" "" 0 "" "" "r2157"
+"MAR02392" "" "r2158" "" "" "" "r2158" "MNXR106055" "" "" "" 0 "" "" "r2158"
+"MAR02394" "" "r2159" "" "" "" "r2159" "MNXR106056" "" "" "" 0 "" "" "r2159"
+"MAR04144" "" "EX_C02528_e" "" "" "" "EX_C02528[e]" "MNXR98101" "" "" "" 0 "" "" "EX_C02528[e]"
+"MAR10447" "" "HC02220c" "" "" "" "HC02220c" "" "" "" "" 0 "" "" "HC02220c"
+"MAR00941" "R07041" "" "R07041C" "" "" "" "MNXR110751" "HMR_0941" "RCR12090" "" 0 "" "" "HMR_0941"
+"MAR06142" "" "" "" "r2236" "" "" "MNXR106133" "HMR_6142" "RCR40595" "2.A.60.1.5" 0 "" "" "HMR_6142"
+"MAR06143" "" "" "" "r2237" "" "" "MNXR106134" "HMR_6143" "RCR40596" "2.A.60.1.5" 0 "" "" "HMR_6143"
+"MAR06144" "" "" "" "r2238" "" "" "MNXR106135" "HMR_6144" "RCR40597" "2.A.60.1.5" 0 "" "" "HMR_6144"
+"MAR06220" "" "" "" "r2315" "" "" "MNXR106212" "HMR_6220" "RCR40672" "2.A.60.1.2" 0 "" "" "HMR_6220"
+"MAR06252" "" "" "" "r2346" "" "" "MNXR106235" "HMR_6252" "RCR40129" "" 0 "" "" "HMR_6252"
+"MAR09733" "R03674" "" "" "" "" "HMR_9733" "MNXR108330" "HMR_9733" "RCR14346" "" 0 "" "" "HMR_9733"
+"MAR09734" "R04884" "" "" "" "" "HMR_9734" "MNXR109190" "HMR_9734" "RCR14347" "" 0 "RHEA:33516" "RHEA:33515" "HMR_9734"
+"MAR10025" "" "" "" "" "" "" "" "" "" "" 0 "" "" "HMR_10025"
+"MAR03767" "R01651" "OIVD1m" "R03171M" "r0601" "" "OIVD1m" "MNXR102172;MNXR107999" "HMR_3767" "RCR14422" "" 0 "" "RHEA:25177" "HMR_3767"
+"MAR04506" "" "C120CPT1" "" "" "" "C120CPT1" "" "" "" "" 0 "" "" "C120CPT1"
+"MAR00042" "" "3HBCOAHLm" "" "" "" "3HBCOAHLm" "MNXR94891" "" "" "" 0 "" "" "3HBCOAHLm"
+"MAR00659" "" "EX_phyt_e" "" "" "" "EX_phyt[e]" "MNXR98853" "" "" "" 0 "" "" "EX_phyt[e]"
+"MAR00740" "" "FACOAL206" "" "" "" "FACOAL206" "MNXR99186" "" "" "" 0 "" "" "FACOAL206"
+"MAR01617" "" "PHYTt" "" "" "" "PHYTt" "MNXR102660" "" "" "" 0 "" "" "PHYTt"
+"MAR01709" "" "SCP22x" "" "" "" "SCP22x" "MNXR104294" "" "" "" 0 "" "" "SCP22x"
+"MAR05323" "" "FAOXC16Brx" "" "" "" "FAOXC16BRx" "MNXR99186" "" "" "" 0 "" "" "FAOXC16BRx"
+"MAR02588" "" "" "RE3503C" "" "" "RE3503C" "MNXR103936" "HMR_2588" "RCR12020" "" 0 "" "" "HMR_2588"
+"MAR03441" "" "RE3150C" "" "" "" "RE3150C" "MNXR103806" "" "" "" 0 "" "" "RE3150C"
+"MAR10164" "" "" "" "" "" "CE2516t" "" "" "" "" 0 "" "" "CE2516t"
+"MAR10433" "" "" "" "" "" "EX_CE2516[e]" "" "" "" "" 0 "" "" "EX_CE2516[e]"
+"MAR01630" "" "" "" "" "R-HSA-192325" "HMR_1630" "MNXR125295" "HMR_1630" "RCR20511" "" 0 "" "" "HMR_1630"
+"MAR01635" "R08734" "" "RE2624M" "" "R-HSA-192056" "HMR_1635;RE2624M" "MNXR112240" "HMR_1635" "RCR13606" "" 0 "RHEA:40456" "RHEA:40455" "HMR_1635"
+"MAR01637" "" "" "RE3247M" "r0706" "R-HSA-192335" "HMR_1637;RE3247M" "MNXR105369;MNXR124225" "HMR_1637" "RCR13607" "" 0 "" "" "HMR_1637"
+"MAR01644" "R04813" "" "RE3248M" "" "" "HMR_1644" "" "HMR_1644" "RCR12830" "" 0 "" "RHEA:18933" "HMR_1644"
+"MAR01653" "R03719" "SCPx" "R03719X" "r0628" "" "HMR_1653" "MNXR104297;MNXR108369" "HMR_1653" "RCR13610" "" 0 "" "RHEA:16865" "HMR_1653"
+"MAR03754" "" "" "" "" "" "RE3248M" "" "" "" "" 0 "" "" "RE3248M"
+"MAR03760" "" "" "" "" "" "RE3250M" "" "" "" "" 0 "" "" "RE3250M"
+"MAR01656" "" "" "" "r0990" "" "r0990" "MNXR105412" "HMR_1656" "RCR20134" "" 0 "" "" "HMR_1656"
+"MAR07758" "" "" "RT0402" "" "" "HMR_7758" "" "HMR_7758" "RCR20277" "" 0 "" "" "HMR_7758"
+"MAR01662" "R07296" "" "RE1834M" "" "" "RE1834M" "MNXR103558;MNXR110971" "HMR_1662" "RCR13611" "" 0 "RHEA:14542" "RHEA:14541" "HMR_1662"
+"MAR01666" "" "" "" "" "R-HSA-193399" "HMR_1666" "MNXR125298" "HMR_1666" "RCR20514" "" 0 "RHEA:72683" "RHEA:72683" "HMR_1666"
+"MAR01458" "" "HSD17B4x" "" "" "" "HSD17B4x" "MNXR100720" "" "" "" 0 "" "" "HSD17B4x"
+"MAR01651" "R04812" "" "RE3250M" "" "" "HMR_1651" "" "HMR_1651" "RCR12831" "" 0 "" "" "HMR_1651"
+"MAR01639" "" "" "RE3247X;RE3247M" "r0706" "R-HSA-192335" "RE3247X;r0706;HMR_1637;RE3247M" "MNXR105369;MNXR124225" "HMR_1639;HMR_1637" "RCR10917;RCR13607" "" 0 "" "" "HMR_1639;HMR_1637;MAR01637"
+"MAR03301" "" "" "RE1516X" "" "" "" "" "HMR_3301" "RCR12606" "" 0 "" "" "HMR_3301"
+"MAR03306" "" "" "RE1517X" "" "" "" "" "HMR_3306" "RCR12610" "" 0 "" "" "HMR_3306"
+"MAR03311" "" "" "RE1518X" "" "" "" "" "HMR_3311" "RCR14519" "" 0 "" "" "HMR_3311"
+"MAR04966" "" "FAOXC101C102x" "" "" "" "FAOXC101C102x" "" "" "" "" 0 "" "" "FAOXC101C102x"
+"MAR03364" "" "" "RE2913X" "" "" "" "" "HMR_3364" "RCR12576" "" 0 "" "" "HMR_3364"
+"MAR03369" "" "" "RE2914X" "" "" "" "" "HMR_3369" "RCR12580" "" 0 "" "" "HMR_3369"
+"MAR09887" "" "GLNB0AT3tc" "" "" "" "GLNB0AT3tc" "" "" "" "" 0 "" "" "GLNB0AT3tc"
+"MAR00059" "" "ACOX22x" "" "" "" "ACOX22x" "MNXR95389" "" "" "" 0 "" "" "ACOX22x"
+"MAR00024" "" "" "" "" "" "HMR_0024" "" "HMR_0024" "RCR13367" "" 0 "" "" "HMR_0024"
+"MAR00025" "" "" "" "" "" "HMR_0025;HMR_0030" "" "HMR_0025;HMR_0030" "RCR20226;RCR20227" "" 0 "" "" "HMR_0025;HMR_0030;MAR00030"
+"MAR00026" "" "" "" "" "" "HMR_0026" "" "HMR_0026" "RCR21051" "" 0 "" "" "HMR_0026"
+"MAR00027" "" "" "" "" "" "HMR_0027" "" "HMR_0027" "RCR21052" "" 0 "" "" "HMR_0027"
+"MAR00028" "" "" "" "" "" "HMR_0028" "" "HMR_0028" "RCR21053" "" 0 "" "" "HMR_0028"
+"MAR00029" "" "" "" "" "" "HMR_0029" "" "HMR_0029" "RCR40953" "" 0 "" "" "HMR_0029"
+"MAR05173" "" "" "" "" "" "HMR_5173" "" "HMR_5173" "RCR14475" "" 0 "" "" "HMR_5173"
+"MAR05289" "" "" "" "" "" "HMR_5289" "" "HMR_5289" "RCR14478" "" 0 "" "" "HMR_5289"
+"MAR13064" "" "" "" "" "" "EX_M01268[e]" "" "" "" "" 0 "" "" "EX_M01268[e]"
+"MAR01515" "" "MAOX" "" "" "" "MAOX" "MNXR101406" "" "" "" 0 "RHEA:59421" "RHEA:59420" "MAOX"
+"MAR00039" "" "13DAMPPOX" "" "" "" "13DAMPPOX" "MNXR94687" "" "" "" 0 "" "" "13DAMPPOX"
+"MAR00096" "" "BUP2" "" "" "" "BUP2" "MNXR96346" "" "" "" 0 "" "" "BUP2"
+"MAR02027" "" "r0193" "" "" "" "r0193" "MNXR105313" "" "" "" 0 "" "" "r0193"
+"MAR02006" "" "CPS_m" "" "" "" "r0034" "" "" "" "" 0 "" "" "r0034"
+"MAR06400" "R07768" "" "R07768C" "" "" "HMR_6400" "MNXR111356" "HMR_6400" "RCR11944" "" 0 "" "" "HMR_6400"
+"MAR06401" "R07769" "" "R07769C" "" "" "HMR_6401" "MNXR111357" "HMR_6401" "RCR11945" "" 0 "" "" "HMR_6401"
+"MAR03940" "R01795" "PHETHPTOX" "R01795C" "r0399" "" "r0399" "MNXR102632;MNXR107174" "HMR_3940" "RCR11388" "" 0 "" "RHEA:30787" "HMR_3940"
+"MAR07785" "" "ATPtx" "" "" "" "ATPtx" "MNXR96140" "HMR_7785" "RCR20040" "" 0 "" "" "HMR_7785"
+"MAR07775" "" "NADHtpu" "" "" "" "NADHtpu;NADtpu" "MNXR101881" "HMR_7775" "RCR20024" "" 0 "" "" "HMR_7775"
+"MAR07788" "" "FADH2tx" "" "" "" "FADH2tx" "MNXR99212" "HMR_7788" "RCR20202" "" 0 "" "" "HMR_7788"
+"MAR04915" "" "COAtp" "" "r0864" "" "COAtp" "MNXR96815" "HMR_4915" "RCR20004" "" 0 "" "" "HMR_4915"
+"MAR07771" "" "NADtpu" "" "" "" "NADtx" "MNXR101881" "HMR_7771" "RCR20023" "" 0 "" "" "HMR_7771"
+"MAR07782" "" "ADPtx" "" "" "" "ADPtx" "MNXR95484" "HMR_7782" "RCR20201" "" 0 "" "" "HMR_7782"
+"MAR07783" "" "AMPtp" "" "" "" "AMPtp" "MNXR95830" "HMR_7783" "RCR20046" "" 0 "" "" "HMR_7783"
+"MAR07790" "" "FADtx" "" "" "" "FADtx" "MNXR99217" "HMR_7790" "RCR20203" "" 0 "" "" "HMR_7790"
+"MAR08564" "" "KYNAKGAT" "" "" "" "KYNAKGAT" "MNXR100948" "HMR_8564" "RCR11356" "" 0 "" "" "HMR_8564"
+"MAR08565" "R03445" "KYNATESYN" "" "" "" "KYNATESYN" "MNXR100949" "HMR_8565" "RCR11357" "" 0 "" "RHEA:42452" "HMR_8565"
+"MAR01483" "" "LIPOti" "" "" "" "LIPOti" "MNXR101093" "" "" "" 0 "" "" "LIPOti"
+"MAR06406" "" "LIPOti" "RT1089" "" "" "" "MNXR101093" "HMR_6406" "RCR41534" "" 0 "" "" "HMR_6406"
+"MAR00478" "R00844" "" "" "" "R-HSA-75889" "HMR_0478" "MNXR99876" "HMR_0478" "RCR14575" "" 0 "RHEA:11098" "RHEA:11096" "HMR_0478"
+"MAR00482" "R00848;R00849" "G3PD2m" "R00848C" "r0205" "" "HMR_0482;r0205" "MNXR99875;MNXR106713" "HMR_0482;HMR_0483" "RCR14578;RCR21050" "" 0 "" "RHEA:31283;RHEA:18977" "HMR_0482;HMR_0483;MAR00483"
diff --git a/data/metabolicTasks/metabolicTasks_CellfieConsensus.txt b/data/metabolicTasks/metabolicTasks_CellfieConsensus.txt
index 683f65e1..778b9177 100644
--- a/data/metabolicTasks/metabolicTasks_CellfieConsensus.txt
+++ b/data/metabolicTasks/metabolicTasks_CellfieConsensus.txt
@@ -211,7 +211,7 @@
NAD+[m] 1 1 CO2[m] 1 1
NADH[m] 1 1
34 Synthesis of fructose-6-phosphate from erythrose-4-phosphate (HMP shunt) fructose-6-phosphate[c] 1 1 erythrose-4-phosphate[c] 1 1
- GAP[c] 1 1 D-xylulose-5-phosphate[c] 1 1
+ D-glyceraldehyde 3-phosphate[c] 1 1 D-xylulose-5-phosphate[c] 1 1
35 Synthesis of ribose-5-phosphate glucose[c] 1 1 ribose-5-phosphate[c] 1 1
ATP[c] 1 1 ADP[c] 1 1
NADP+[c] 2 2 H+[c] 3 3
@@ -220,13 +220,13 @@
36 Synthesis of lactose glucose[g] 1 1 lactose[g] 1 1
UDP-galactose[g] 1 1 UDP[g] 1 1
H+[g] 1 1
- 37 Glycogen biosynthesis NA[c] 1 1 glycogenin G4G7[c] 1 1
- UDP-glucose[c] 11 H+[c] 11
- UDP[c] 11
- 38 Glycogen degradation glycogenin G4G7[c] 1 1 glucose[c] 8
- Pi[c] 3 NA[c] 1 1
- H2O[c] 8 glucose-1-phosphate[c] 3
- 39 Fructose degradation (to glucose-3-phosphate) fructose[c] 1 1 GAP[c] 2 2
+# 37 Glycogen biosynthesis NA[c] 1 1 glycogenin G4G7[c] 1 1 The metabolite NA[c] in this task is conflicting with HumanGEM
+# UDP-glucose[c] 11 H+[c] 11
+# UDP[c] 11
+# 38 Glycogen degradation glycogenin G4G7[c] 1 1 glucose[c] 8 The metabolite NA[c] in this task is conflicting with HumanGEM
+# Pi[c] 3 NA[c] 1 1
+# H2O[c] 8 glucose-1-phosphate[c] 3
+ 39 Fructose degradation (to glucose-3-phosphate) fructose[c] 1 1 D-glyceraldehyde 3-phosphate[c] 2 2
ATP[c] 2 2 ADP[c] 2 2
H+[c] 2 2
40 Fructose to glucose conversion (via fructose-6-phosphate) fructose[c] 1 1 glucose[c] 1 1
@@ -1130,14 +1130,14 @@
180 Pyridoxal-phosphate synthesis pyridoxal[c] 1 1 pyridoxal-phosphate[c] 1 1
ATP[c] 1 1 ADP[c] 1 1
H+[c] 1 1
- 181 Synthesis of bilirubin heme[c] 1 1 bilirubin[c] 1 1
- NADPH[c] 0 4 H2O[c] 0 3
- H+[c] 0 6 Fe2+[c] 0 1
- O2[c] 0 3 Fe3+[c] 0 1
- FADH2[c] 0 1 NADP+[c] 0 4
- FAD[c] 0 1
- CO[c] 1 1
- NA[c] 0 1
+# 181 Synthesis of bilirubin heme[c] 1 1 bilirubin[c] 1 1 The metabolite NA[c] in this task is conflicting with HumanGEM
+# NADPH[c] 0 4 H2O[c] 0 3
+# H+[c] 0 6 Fe2+[c] 0 1
+# O2[c] 0 3 Fe3+[c] 0 1
+# FADH2[c] 0 1 NADP+[c] 0 4
+# FAD[c] 0 1
+# CO[c] 1 1
+# NA[c] 0 1
182 Heme synthesis glycine[m] 16 16 heme[m] 2 2
succinyl-CoA[m] 16 18 H2O[m] 26 26
Fe2+[m] 2 2 CoA[m] 16 18
diff --git a/data/modelCuration/addMetAA_20230518.tsv b/data/modelCuration/addMetAA_20230518.tsv
new file mode 100644
index 00000000..6e6259d4
--- /dev/null
+++ b/data/modelCuration/addMetAA_20230518.tsv
@@ -0,0 +1,63 @@
+MetID Name Fromula Charge Comp KEGG PubChem CHEBI MetaCyc MetaNetx
+MAM20061c epsilon-(gamma-L-Glutamyl)-L-lysine C11H21N3O5 0 c C21730 350078307 CHEBI:133752 CPD-20483 MNXM52422
+MAM20061n epsilon-(gamma-L-Glutamyl)-L-lysine C11H21N3O5 0 n C21730 350078307 CHEBI:133752 CPD-20483 MNXM52422
+MAM01127n 5-oxoproline C5H6NO3 -1 n C01879 7405 CHEBI:18183 5-OXOPROLINE MNXM964
+MAM20071r "N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sphinganine" C38H69NO3 0 r CHEBI:85206 MNXM147177
+MAM01362g arachidonate C20H31O2 -1 g CHEBI:32395 MNXM1107770
+MAM20071g "N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sphinganine" C38H69NO3 0 g CHEBI:85206 MNXM147177
+MAM20070r "N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-(4R)-hydroxysphinganine" C38H69NO4 0 r CHEBI:85207 MNXM147175
+MAM20070g "N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-(4R)-hydroxysphinganine" C38H69NO4 0 g CHEBI:85207 MNXM147175
+MAM20068r N-(11Z-eicosenoyl)-sphing-4-enine C38H73NO3 0 r CHEBI:85284 MNXM147168
+MAM01584g cis-gondoic acid C20H37O2 -1 g CHEBI:32426 MNXM1107952
+MAM20068g N-(11Z-eicosenoyl)-sphing-4-enine C38H73NO3 0 g CHEBI:85284 MNXM147168
+MAM20069r N-(11Z-eicosenoyl)-sphinganine C38H75NO3 0 r CHEBI:85285 MNXM147169
+MAM20069g N-(11Z-eicosenoyl)-sphinganine C38H75NO3 0 g CHEBI:85285 MNXM147169
+MAM20067r N-(11Z-eicosenoyl)-(4R)-hydroxysphinganine C38H75NO4 0 r CHEBI:85286 MNXM147167
+MAM20067g N-(11Z-eicosenoyl)-(4R)-hydroxysphinganine C38H75NO4 0 g CHEBI:85286 MNXM147167
+MAM20073r N-(9Z-octadecenoyl)-sphing-4-enine C36H69NO3 0 r CHEBI:77996 MNXM46121
+MAM20073g N-(9Z-octadecenoyl)-sphing-4-enine C36H69NO3 0 g CHEBI:77996 MNXM46121
+MAM01778g elaidate C18H33O2 -1 g C00712 5460221 CHEBI:30823 MNXM1107708
+MAM20074r N-(9Z-octadecenoyl)-sphinganine C36H71NO3 0 r CHEBI:74100 MNXM46086
+MAM20074g N-(9Z-octadecenoyl)-sphinganine C36H71NO3 0 g CHEBI:74100 MNXM46086
+MAM20072r N-(9Z-octadecenoyl)-(4R)-hydroxysphinganine C36H71NO4 0 r CHEBI:85204 MNXM147178
+MAM20072g N-(9Z-octadecenoyl)-(4R)-hydroxysphinganine C36H71NO4 0 g CHEBI:85204 MNXM147178
+MAM01806m farnesyl-PP C15H25O7P2 -3 m CHEBI:175763 MNXM1103344
+MAM20064m Fe(II)-heme o C49H56FeN4O5 -2 m CHEBI:60530 MNXM1107744
+MAM20064c Fe(II)-heme o C49H56FeN4O5 -2 c CHEBI:60530 MNXM1107744
+MAM01806n farnesyl-PP C15H25O7P2 -3 n CHEBI:175763 MNXM1103344
+MAM02049n heme C34H30FeN4O4 -2 n CHEBI:60344 MNXM249
+MAM20064n Fe(II)-heme o C49H56FeN4O5 -2 n CHEBI:60530 MNXM1107744
+MAM03652c "Hexadecenoyl Ethanolamide, C16:1-Ethanolamide (Delta 9)" C18H37NO2 0 c CHEBI:71464 MNXM107548
+MAM03550c "C12:0-Ethanolamide, Didecanoyl Ethanolamide" C14H29NO2 0 c CHEBI:85263 MNXM59819
+MAM03977c "C14:0-Ethanolamide, Tetradecanoyl Ethanolamide" C16H33NO2 0 c CHEBI:85262 MNXM62840
+MAM20076n N-hexadecanoylsphing-4-enine C34H67NO3 0 c CHEBI:72959 MNXM731444
+MAM20075c N-dodecanoylsphing-4-enine C30H59NO3 0 c CHEBI:72956 MNXM46112
+MAM01657r dehydrodolichol-diphosphate C100H161O7P2 -3 r C05859 CHEBI:136960 MNXM1137698
+MAM01252n acetate C2H3O2 -1 n CHEBI:30089 MNXM26
+MAM01288n ADP-ribose C15H21N5O14P2 0 n CHEBI:57967 MNXM1104545
+MAM20077n 2-O-acetyl-ADP-D-ribose C17H23N5O15P2 -2 n CHEBI:83767 MNXM732228
+MAM02583n nicotinamide C6H6N2O 0 n CHEBI:17154 MNXM216
+MAM20063n alpha-NAD(+) C21H26N7O14P2 -1 n CHEBI:77017 MNXM166986
+MAM20062n 3-O-acetyl-ADP-D-ribose C17H23N5O15P2 -2 n CHEBI:142723 MNXM117128
+MAM20066c menaquinol-4 C31H42O2 0 c CHEBI:193091 MNXM819046
+MAM20065c menadiol C11H10O2 0 c CHEBI:6746 MNXM3658
+MAM20066r menaquinol-4 C31H42O2 0 r CHEBI:193091 MNXM819046
+MAM03590r "2-Trans,6-Trans,10-Trans-Geranylgeranyl Diphosphate" C20H33O7P2 r CHEBI:58756 MNXM728266
+MAM20065r menadiol C11H10O2 0 r CHEBI:6746 MNXM3658
+MAM20066g menaquinol-4 C31H42O2 0 g CHEBI:193091 MNXM819046
+MAM02759g PPi HO7P2 -3 g CHEBI:33019 MNXM11
+MAM03590g "2-Trans,6-Trans,10-Trans-Geranylgeranyl Diphosphate" C20H33O7P2 -3 g CHEBI:58756 MNXM728266
+MAM20065g menadiol C11H10O2 0 g CHEBI:6746 MNXM3658
+MAM20066n menaquinol-4 C31H42O2 0 n CHEBI:193091 MNXM819046
+MAM03590n "2-Trans,6-Trans,10-Trans-Geranylgeranyl Diphosphate" C20H33O7P2 -3 n CHEBI:58756 MNXM728266
+MAM20065n menadiol C11H10O2 0 n CHEBI:6746 MNXM3658
+MAM00767c 3-decaprenyl-4-hydroxybenzoate C57H85O3 -1 c CHEBI:84503 MNXM733937
+MAM00995r 4-hydroxybenzoate C7H5O3 -1 r CHEBI:17879 MNXM164
+MAM01316r all-trans-decaprenyl-diphosphate C50H81O7P2 -3 r CHEBI:60721 MNXM731626
+MAM00767r 3-decaprenyl-4-hydroxybenzoate C57H85O3 -1 r CHEBI:84503 MNXM733937
+MAM00995g 4-hydroxybenzoate C7H5O3 -1 g CHEBI:17879 MNXM164
+MAM01316g all-trans-decaprenyl-diphosphate C50H81O7P2 -3 g CHEBI:60721 MNXM731626
+MAM00767g 3-decaprenyl-4-hydroxybenzoate C57H85O3 -1 g CHEBI:84503 MNXM733937
+MAM00995n 4-hydroxybenzoate C7H5O3 -1 n CHEBI:17879 MNXM164
+MAM01316n all-trans-decaprenyl-diphosphate C50H81O7P2 -3 n CHEBI:60721 MNXM731626
+MAM00767n 3-decaprenyl-4-hydroxybenzoate C57H85O3 -1 n CHEBI:84503 MNXM733937
\ No newline at end of file
diff --git a/data/modelCuration/addRxnAA_20230518.tsv b/data/modelCuration/addRxnAA_20230518.tsv
new file mode 100644
index 00000000..a227e97a
--- /dev/null
+++ b/data/modelCuration/addRxnAA_20230518.tsv
@@ -0,0 +1,40 @@
+rxnID Equation Reversibility grRules Comp RHEA MetaNetx KEGG BiGG EC number MetaCyc Subsystems Reactome
+MAR20071 epsilon-(gamma-L-Glutamyl)-L-lysine[c] => lysine[c] + 5-oxoproline[c] 1 ENSG00000134864 c RHEA:16962 MNXR165843 R00490 4.3.2.8 RXN-19023 Alanine, aspartate and glutamate metabolism
+MAR20072 epsilon-(gamma-L-Glutamyl)-L-lysine[n] => lysine[n] + 5-oxoproline[n] 1 ENSG00000134864 n RHEA:16962 MNXR165843 R00490 4.3.2.8 RXN-19023 Alanine, aspartate and glutamate metabolism
+MAR20073 H2O[r] + N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sphinganine[r] => arachidonate[r] + sphinganine[r] 1 ENSG00000078124 r RHEA:45376 MNXR168658 Fatty acid metabolism
+MAR20074 H2O[g] + N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sphinganine[g] => arachidonate[g] + sphinganine[g] 1 ENSG00000078124 g RHEA:45376 MNXR168658 Fatty acid metabolism
+MAR20075 H2O[r] + N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-(4R)-hydroxysphinganine[r] => phytosphingosine[r] + arachidonate[r] 1 ENSG00000078124 r RHEA:45380 MNXR168659 Fatty acid metabolism
+MAR20076 H2O[g] + N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-(4R)-hydroxysphinganine[g] => phytosphingosine[g] + arachidonate[g] 1 ENSG00000078124 g RHEA:45380 MNXR168659 Fatty acid metabolism
+MAR20077 H2O[r] + N-(11Z-eicosenoyl)-sphing-4-enine[r] => cis-gondoic acid[r] + sphingosine[r] 1 ENSG00000078124 r RHEA:45356 MNXR168653 Fatty acid metabolism
+MAR20078 H2O[g] + N-(11Z-eicosenoyl)-sphing-4-enine[g] => cis-gondoic acid[g] + sphingosine[g] 1 ENSG00000078124 g RHEA:45356 MNXR168653 Fatty acid metabolism
+MAR20079 H2O[r] + N-(11Z-eicosenoyl)-sphinganine[r] => cis-gondoic acid[r] + sphinganine[r] 1 ENSG00000078124 r RHEA:45360 MNXR168654 Fatty acid metabolism
+MAR20080 H2O[g] + N-(11Z-eicosenoyl)-sphinganine[g] => cis-gondoic acid[g] + sphinganine[g] 1 ENSG00000078124 g RHEA:45360 MNXR168654 Fatty acid metabolism
+MAR20081 H2O[r] + N-(11Z-eicosenoyl)-(4R)-hydroxysphinganine[r] => cis-gondoic acid[r] + phytosphingosine[r] 1 ENSG00000078124 r RHEA:45364 MNXR168655 Fatty acid metabolism
+MAR20082 H2O[g] + N-(11Z-eicosenoyl)-(4R)-hydroxysphinganine[g] => cis-gondoic acid[g] + phytosphingosine[g] 1 ENSG00000078124 g RHEA:45364 MNXR168655 Fatty acid metabolism
+MAR20083 H2O[r] + N-(9Z-octadecenoyl)-sphing-4-enine[r] => oleate[r] + sphingosine[r] 1 ENSG00000078124 r RHEA:41299 MNXR167977 Fatty acid metabolism
+MAR20084 H2O[g] + N-(9Z-octadecenoyl)-sphing-4-enine[g] => elaidate[g] + sphingosine[g] 1 ENSG00000078124 g RHEA:41299 MNXR167977 Fatty acid metabolism
+MAR20085 H2O[r] + N-(9Z-octadecenoyl)-sphinganine[r] => oleate[r] + sphinganine[r] 1 ENSG00000078124 r RHEA:45372 MNXR168657 Fatty acid metabolism
+MAR20086 H2O[g] + N-(9Z-octadecenoyl)-sphinganine[g] => elaidate[g] + sphinganine[g] 1 ENSG00000078124 g RHEA:45372 MNXR168657 Fatty acid metabolism
+MAR20087 H2O[r] + N-(9Z-octadecenoyl)-(4R)-hydroxysphinganine[r] => phytosphingosine[r] + oleate[r] 1 ENSG00000078124 r RHEA:45368 MNXR168656 Fatty acid metabolism
+MAR20088 H2O[g] + N-(9Z-octadecenoyl)-(4R)-hydroxysphinganine[g] => phytosphingosine[g] + elaidate[g] 1 ENSG00000078124 g RHEA:45368 MNXR168656 Fatty acid metabolism
+MAR20089 5-hydroxy-L-tryptophan[c] + H+[c] => CO2[c] + serotonin[c] 0 ENSG00000132437 c RHEA:18533 MNXR151808 R02701 4.1.1.28 RXN3DJ-170 Tryptophan metabolism
+MAR20090 farnesyl-PP[m] + H2O[m] + heme[m] => Fe(II)-heme o[m] + PPi[m] 0 ENSG00000006695 m RHEA:28070 MNXR115959 R07411 HEMEOS;HEMEOS_1;HEMEOSm;HEMEOSm_1;R_HEMEOS;R_HEMEOS_1;R_HEMEOSm;R_HEMEOSm_1 2.5.1.-;2.5.1.141 HEMEOSYN-RXN Porphyrin metabolism
+MAR20091 farnesyl-PP[c] + H2O[c] + heme[c] => Fe(II)-heme o[c] + PPi[c] 0 ENSG00000006695 c RHEA:28070 MNXR115959 R07411 HEMEOS;HEMEOS_1;HEMEOSm;HEMEOSm_1;R_HEMEOS;R_HEMEOS_1;R_HEMEOSm;R_HEMEOSm_1 2.5.1.-;2.5.1.141 HEMEOSYN-RXN Porphyrin metabolism
+MAR20092 farnesyl-PP[n] + H2O[n] + heme[n] => Fe(II)-heme o[n] + PPi[n] 0 ENSG00000006695 n RHEA:28070 MNXR115959 R07411 HEMEOS;HEMEOS_1;HEMEOSm;HEMEOSm_1;R_HEMEOS;R_HEMEOS_1;R_HEMEOSm;R_HEMEOSm_1 2.5.1.-;2.5.1.141 HEMEOSYN-RXN Porphyrin metabolism
+MAR20093 H2O[c] + Hexadecenoyl Ethanolamide, C16:1-Ethanolamide (Delta 9)[c] => ethanolamine[c] + palmitate[c] 0 ENSG00000138744 c RHEA:45064 MNXR168605 3.5.1.60;3.5.1.99 Fatty acid metabolism
+MAR20094 C12:0-Ethanolamide, Didecanoyl Ethanolamide[c] + H2O[c] => ethanolamine[c] + lauric acid[c] 0 ENSG00000138744 c RHEA:45456 MNXR168677 3.5.1.99 Fatty acid metabolism
+MAR20095 H2O[c] + C14:0-Ethanolamide, Tetradecanoyl Ethanolamide[c] => ethanolamine[c] + myristic acid[c] 0 ENSG00000138744 c RHEA:45452 MNXR168676 3.5.1.99 Fatty acid metabolism
+MAR20096 H2O[c] + N-hexadecanoylsphing-4-enine[c] => palmitate[c] + sphingosine[c] 0 ENSG00000138744 c RHEA:38891 MNXR132111 3.5.1.23 Fatty acid metabolism
+MAR20097 H2O[c] + N-dodecanoylsphing-4-enine[c] => lauric acid[c] + sphingosine[c] 0 ENSG00000138744 c RHEA:41291 MNXR127741 3.5.1.23 Fatty acid metabolism
+MAR20098 farnesyl-PP[r] + 5 isopentenyl-pPP[r] => dehydrodolichol-diphosphate[r] + 5 PPi[r] 0 ENSG00000117682 r RHEA:53008 2.5.1.87 Terpenoid backbone biosynthesis
+MAR20099 2-O-acetyl-ADP-D-ribose[n] + H2O[n] => ADP-ribose[n] + H+[n] + acetate[n] 0 ENSG00000172264 or ENSG00000133315 or ENSG00000124596 n RHEA:57060 MNXR123366 R12391 3.1.1.106 Isolated
+MAR20100 H2O[n] + alpha-NAD(+)[n] => ADP-ribose[n] + H+[n] + nicotinamide[n] 0 ENSG00000172264 or ENSG00000133315 or ENSG00000124596 n RHEA:68792 Isolated
+MAR20101 3-O-acetyl-ADP-D-ribose[n] + H2O[n] => ADP-ribose[n] + H+[n] + acetate[n] 0 ENSG00000133315 n RHEA:59244 MNXR163813 R12390 3.1.1.106;3.1.1.y Isolated
+MAR20102 2-Trans,6-Trans,10-Trans-Geranylgeranyl Diphosphate[c] + menadiol[c] => PPi[c] + menaquinol-4[c] 0 ENSG00000120942 c RHEA:74083 2.5.1.M22 RXN-19669 Isolated
+MAR20103 2-Trans,6-Trans,10-Trans-Geranylgeranyl Diphosphate[r] + menadiol[r] => PPi[r] + menaquinol-4[r] 0 ENSG00000120942 r RHEA:74083 2.5.1.M22 RXN-19669 Isolated
+MAR20104 2-Trans,6-Trans,10-Trans-Geranylgeranyl Diphosphate[g] + menadiol[g] => PPi[g] + menaquinol-4[g] 0 ENSG00000120942 g RHEA:74083 2.5.1.M22 RXN-19669 Isolated
+MAR20105 2-Trans,6-Trans,10-Trans-Geranylgeranyl Diphosphate[n] + menadiol[n] => PPi[n] + menaquinol-4[n] 0 ENSG00000120942 n RHEA:74083 2.5.1.M22 RXN-19669 Isolated
+MAR20106 4-hydroxybenzoate[c] + all-trans-decaprenyl-diphosphate[c] => 3-decaprenyl-4-hydroxybenzoate[c] + PPi[c] 0 ENSG00000120942 c RHEA:44564 MNXR100567 HBZOPT10m;R_HBZOPT10m 2.5.1.39 Ubiquinone and other terpenoid-quinone biosynthesis
+MAR20107 4-hydroxybenzoate[r] + all-trans-decaprenyl-diphosphate[r] => 3-decaprenyl-4-hydroxybenzoate[r] + PPi[r] 0 ENSG00000120942 r RHEA:44564 MNXR100567 HBZOPT10m;R_HBZOPT10m 2.5.1.39 Ubiquinone and other terpenoid-quinone biosynthesis
+MAR20108 4-hydroxybenzoate[g] + all-trans-decaprenyl-diphosphate[g] => 3-decaprenyl-4-hydroxybenzoate[g] + PPi[g] 0 ENSG00000120942 g RHEA:44564 MNXR100567 HBZOPT10m;R_HBZOPT10m 2.5.1.39 Ubiquinone and other terpenoid-quinone biosynthesis
+MAR20109 4-hydroxybenzoate[n] + all-trans-decaprenyl-diphosphate[n] => 3-decaprenyl-4-hydroxybenzoate[n] + PPi[n] 0 ENSG00000120942 n RHEA:44564 MNXR100567 HBZOPT10m;R_HBZOPT10m 2.5.1.39 Ubiquinone and other terpenoid-quinone biosynthesis
\ No newline at end of file
diff --git a/model/Human-GEM.yml b/model/Human-GEM.yml
index ea500362..7582d8f7 100644
--- a/model/Human-GEM.yml
+++ b/model/Human-GEM.yml
@@ -4,7 +4,7 @@
short_name: "Human-GEM"
full_name: "Generic genome-scale metabolic model of Homo sapiens"
version: ""
- date: "2023-05-09"
+ date: "2023-06-25"
taxonomy: "9606"
github: "https://github.com/SysBioChalmers/Human-GEM"
description: "Genome-scale metabolic models are valuable tools to study metabolism and provide a scaffold for the integrative analysis of omics data. This is the latest version of Human-GEM, which is a genome-scale metabolic model of a generic human cell. The objective of Human-GEM is to serve as a community model for enabling integrative and mechanistic studies of human metabolism."
@@ -625,14 +625,6 @@
- charge: -1
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM00029c"
- - name: "(18R)-hydroxy-(5Z,8Z,11Z,14Z,16E)-eicosapentaenoic acid"
- - compartment: "c"
- - formula: "C20H29O3"
- - charge: -1
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM00030c"
- name: "(1aalpha,2beta,3alpha,11calpha)-1a,2,3,11c-tetrahydro-6,11-dimethylbenzo[6,7]phenanthro[3,4-b]oxirene-2,3-diol"
@@ -705,14 +697,6 @@
- charge: 0
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM00036m"
- - name: "(24R,25R)3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA"
- - compartment: "m"
- - formula: "C48H76N7O21P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM00036x"
- name: "(24R,25R)3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA"
@@ -2995,7 +2979,7 @@
- metFrom: "HMRdatabase"
- !!omap
- id: "MAM00185c"
- - name: "[apocarboxlase]"
+ - name: "[apocarboxylase]"
- compartment: "c"
- formula: "XH"
- charge: 0
@@ -7793,22 +7777,6 @@
- charge: -1
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM00591c"
- - name: "20-hydroxy-arachidonate"
- - compartment: "c"
- - formula: "C20H31O3"
- - charge: -1
- - inchis: ""
- - metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM00591e"
- - name: "20-hydroxy-arachidonate"
- - compartment: "e"
- - formula: "C20H31O3"
- - charge: -1
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM00592c"
- name: "20-hydroxycholesterol"
@@ -8153,14 +8121,6 @@
- charge: -4
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM00616m"
- - name: "25(R)THCA-CoA"
- - compartment: "m"
- - formula: "C48H76N7O20P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM00616x"
- name: "25(R)THCA-CoA"
@@ -8185,14 +8145,6 @@
- charge: -4
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM00618m"
- - name: "25(S)THCA-CoA"
- - compartment: "m"
- - formula: "C48H76N7O20P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM00618x"
- name: "25(S)THCA-CoA"
@@ -9793,14 +9745,6 @@
- charge: 0
- inchis: "InChI=1/C27H46O5/c1-15(6-9-22(30)25(2,3)32)18-7-8-19-24-20(14-23(31)27(18,19)5)26(4)11-10-17(28)12-16(26)13-21(24)29/h15-21,23-24,28-29,31-32H,6-14H2,1-5H3/t15?,16?,17?,18-,19?,20?,21?,23?,24?,26+,27-/s2"
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM00748m"
- - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-24-oxocholestanoyl-CoA"
- - compartment: "m"
- - formula: "C48H74N7O21P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM00748x"
- name: "3alpha,7alpha,12alpha-trihydroxy-5beta-24-oxocholestanoyl-CoA"
@@ -9809,14 +9753,6 @@
- charge: -4
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM00749m"
- - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA"
- - compartment: "m"
- - formula: "C48H74N7O20P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM00749x"
- name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA"
@@ -9961,14 +9897,6 @@
- charge: -1
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM00759c"
- - name: "3alpha-hydroxy-5alpha-pregnan-20-one"
- - compartment: "c"
- - formula: "C21H34O2"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM00760c"
- name: "3-amino-propanal"
@@ -11569,14 +11497,6 @@
- charge: -4
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM00902c"
- - name: "3-oxo-tetracosa-9,12,15,18,21-all-cis-pentaenoyl-CoA"
- - compartment: "c"
- - formula: "C45H66N7O18P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM00903c"
- name: "3-oxo-tetracosa-9,12,15,18-all-cis-tetraenoyl-CoA"
@@ -11809,14 +11729,6 @@
- charge: -1
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM00926c"
- - name: "4-(2-aminophenyl)-2,4-dioxobutanoate"
- - compartment: "c"
- - formula: "C10H8NO4"
- - charge: -1
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM00927c"
- name: "4-(methylnitrosamino)-1-(1-oxido-3-pyridinyl)-1-butanone"
@@ -16017,54 +15929,6 @@
- charge: -2
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM01268c"
- - name: "activation-ppara"
- - compartment: "c"
- - formula: "C2303H3655N619O695S34R"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM01268m"
- - name: "activation-ppara"
- - compartment: "m"
- - formula: "C2303H3655N619O695S34R"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM01268n"
- - name: "activation-ppara"
- - compartment: "n"
- - formula: "C2303H3655N619O695S34R"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM01268x"
- - name: "activation-ppara"
- - compartment: "x"
- - formula: "C2303H3655N619O695S34R"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM01268r"
- - name: "activation-ppara"
- - compartment: "r"
- - formula: "C2303H3655N619O695S34R"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM01268e"
- - name: "activation-ppara"
- - compartment: "e"
- - formula: "C2303H3655N619O695S34R"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM01269c"
- name: "acyl-CoA-bile-PC pool"
@@ -18426,37 +18290,21 @@
- inchis: ""
- metFrom: "HMRdatabase"
- !!omap
- - id: "MAM01421c"
- - name: "carbonate"
+ - id: "MAM01422c"
+ - name: "carboxybiotin-carboxyl-carrier"
- compartment: "c"
- - formula: "CH2O3"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM01421m"
- - name: "carbonate"
- - compartment: "m"
- - formula: "CH2O3"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM01421e"
- - name: "carbonate"
- - compartment: "e"
- - formula: "CH2O3"
- - charge: 0
+ - formula: "C17H26N4O5SX"
+ - charge: -1
- inchis: ""
- metFrom: "HMRdatabase"
- !!omap
- - id: "MAM01422c"
+ - id: "MAM01422m"
- name: "carboxybiotin-carboxyl-carrier"
- - compartment: "c"
+ - compartment: "m"
- formula: "C17H26N4O5SX"
- charge: -1
- inchis: ""
- - metFrom: "HMRdatabase"
+ - metFrom: ""
- !!omap
- id: "MAM01423c"
- name: "carnosine"
@@ -18833,14 +18681,6 @@
- charge: -1
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM01445m"
- - name: "cholate"
- - compartment: "m"
- - formula: "C24H39O5"
- - charge: -1
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM01445x"
- name: "cholate"
@@ -20017,14 +19857,6 @@
- charge: -4
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM01514m"
- - name: "choloyl-CoA"
- - compartment: "m"
- - formula: "C45H70N7O20P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM01514x"
- name: "choloyl-CoA"
@@ -24985,14 +24817,6 @@
- charge: -1
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM01816n"
- - name: "fatty acid-ligands"
- - compartment: "n"
- - formula: "R"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM01819e"
- name: "fatty acid-uptake pool"
@@ -25129,6 +24953,14 @@
- charge: -2
- inchis: ""
- metFrom: "HMRdatabase"
+ - !!omap
+ - id: "MAM01828x"
+ - name: "FMN"
+ - compartment: "x"
+ - formula: "C17H19N4O9P"
+ - charge: -2
+ - inchis: ""
+ - metFrom: ""
- !!omap
- id: "MAM01829g"
- name: "fn2m2masn"
@@ -32825,14 +32657,6 @@
- charge: -1
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM02397c"
- - name: "lipoyl-[ACP]"
- - compartment: "c"
- - formula: "C19H33N2O8PRS3"
- - charge: -1
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM02398c"
- name: "lipoyl-AMP"
@@ -33401,9 +33225,17 @@
- charge: -2
- inchis: ""
- metFrom: "HMRdatabase"
+ - !!omap
+ - id: "MAM02443e"
+ - name: "malonyl-carnitine"
+ - compartment: "e"
+ - formula: "C10H16NO6"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
- !!omap
- id: "MAM02443c"
- - name: "malonyl-carnitin"
+ - name: "malonyl-carnitine"
- compartment: "c"
- formula: "C10H16NO6"
- charge: -1
@@ -33411,7 +33243,7 @@
- metFrom: "HMRdatabase"
- !!omap
- id: "MAM02443m"
- - name: "malonyl-carnitin"
+ - name: "malonyl-carnitine"
- compartment: "m"
- formula: "C10H16NO6"
- charge: -1
@@ -33419,7 +33251,7 @@
- metFrom: "HMRdatabase"
- !!omap
- id: "MAM02443x"
- - name: "malonyl-carnitin"
+ - name: "malonyl-carnitine"
- compartment: "x"
- formula: "C10H16NO6"
- charge: -1
@@ -33427,7 +33259,7 @@
- metFrom: "HMRdatabase"
- !!omap
- id: "MAM02443r"
- - name: "malonyl-carnitin"
+ - name: "malonyl-carnitine"
- compartment: "r"
- formula: "C10H16NO6"
- charge: -1
@@ -38073,30 +37905,6 @@
- charge: -1
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM02757c"
- - name: "PPARA"
- - compartment: "c"
- - formula: "C2303H3655N619O695S34"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM02757l"
- - name: "PPARA"
- - compartment: "l"
- - formula: "C2303H3655N619O695S34"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM02757n"
- - name: "PPARA"
- - compartment: "n"
- - formula: "C2303H3655N619O695S34"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM02758c"
- name: "PPE-NME2-LD pool"
@@ -44105,14 +43913,6 @@
- charge: 0
- inchis: ""
- metFrom: "HMRdatabase"
- - !!omap
- - id: "MAM03162c"
- - name: "5,6-dihydroxyindole"
- - compartment: "c"
- - formula: "C8H7NO2"
- - charge: 0
- - inchis: ""
- - metFrom: "HMRdatabase"
- !!omap
- id: "MAM03163c"
- name: "indole-5,6-quinone"
@@ -44217,14 +44017,6 @@
- charge: -1
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03226m"
- - name: "(S)-3-Hydroxyisobutyryl Coenzyme A"
- - compartment: "m"
- - formula: "C25H38N7O18P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM00799c"
- name: "3-hydroxypropionyl-CoA"
@@ -44443,7 +44235,7 @@
- metFrom: "Recon3D"
- !!omap
- id: "MAM00185m"
- - name: "[apocarboxlase]"
+ - name: "[apocarboxylase]"
- compartment: "m"
- formula: "XH"
- charge: 0
@@ -44897,14 +44689,6 @@
- charge: -4
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03554c"
- - name: "4,8-Dimethylnonanoyl Coenzyme A"
- - compartment: "c"
- - formula: "C32H52N7O17P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM03554m"
- name: "4,8-Dimethylnonanoyl Coenzyme A"
@@ -45009,22 +44793,6 @@
- charge: 0
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03573m"
- - name: "Electron Transfer Flavoprotein Oxidized"
- - compartment: "m"
- - formula: "R"
- - charge: 0
- - inchis: ""
- - metFrom: "Recon3D"
- - !!omap
- - id: "MAM03574m"
- - name: "Electron Transfer Flavoprotein Reduced"
- - compartment: "m"
- - formula: "RH2"
- - charge: 0
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM01893e"
- name: "1-Acyl Phosphoglycerol"
@@ -45089,14 +44857,6 @@
- charge: -1
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03884e"
- - name: "Phytanate"
- - compartment: "e"
- - formula: "C20H39O2"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM02808e"
- name: "PS-LD pool"
@@ -45225,14 +44985,6 @@
- charge: -4
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03884c"
- - name: "Phytanate"
- - compartment: "c"
- - formula: "C20H39O2"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM03791m"
- name: "11-Octadecenoyl Coenzyme A"
@@ -45777,14 +45529,6 @@
- charge: -1
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03884x"
- - name: "Phytanate"
- - compartment: "x"
- - formula: "C20H39O2"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM01291x"
- name: "adrenic acid"
@@ -46089,22 +45833,6 @@
- charge: -4
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03318r"
- - name: "Chenodeoxycholate"
- - compartment: "r"
- - formula: "C24H39O4"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- - !!omap
- - id: "MAM03318c"
- - name: "Chenodeoxycholate"
- - compartment: "c"
- - formula: "C24H39O4"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM00726m"
- name: "3,4-dihydroxymandelaldehyde"
@@ -46161,14 +45889,6 @@
- charge: 0
- inchis: "InChI=1S/C30H50O/c1-20(2)10-9-11-21(3)22-14-18-30(8)24-12-13-25-27(4,5)26(31)16-17-28(25,6)23(24)15-19-29(22,30)7/h10,21-22,25-26,31H,9,11-19H2,1-8H3/t21-,22-,25+,26+,28-,29-,30+/m1/s1"
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03318e"
- - name: "Chenodeoxycholate"
- - compartment: "e"
- - formula: "C24H39O4"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM00755m"
- name: "3alpha,7alpha-dihydroxy-5beta-cholest-24-enoyl-CoA"
@@ -47225,14 +46945,6 @@
- charge: -4
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03318m"
- - name: "Chenodeoxycholate"
- - compartment: "m"
- - formula: "C24H39O4"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM00614m"
- name: "25(R)DHCA-CoA"
@@ -48513,14 +48225,6 @@
- charge: 0
- inchis: "InChI=1S/C23H34O3/c1-15(10-12-24)20-8-9-21-17(5-4-11-23(20,21)3)6-7-18-13-19(25)14-22(26)16(18)2/h6-7,12,15,19-22,25-26H,2,4-5,8-11,13-14H2,1,3H3/b17-6+,18-7-/t15-,19+,20-,21+,22+,23?/m0/s1"
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03354c"
- - name: "Tetracosa-9,12,15,18-All-Cis-Tetraenoyl Coenzyme A"
- - compartment: "c"
- - formula: "C45H70N7O17P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM00681r"
- name: "2-trans-9,12,15,18-all-cis-tetracosapentaenoyl-CoA"
@@ -48529,14 +48233,6 @@
- charge: -4
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03354r"
- - name: "Tetracosa-9,12,15,18-All-Cis-Tetraenoyl Coenzyme A"
- - compartment: "r"
- - formula: "C45H70N7O17P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM00864r"
- name: "3-oxo-docosa-7,10,13,16-all-cis-tetraenoyl-CoA"
@@ -48873,14 +48569,6 @@
- charge: -4
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03367m"
- - name: "24(R),25(R)-Varanoyl Coenzyme A"
- - compartment: "m"
- - formula: "C48H76N7O21P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM03367x"
- name: "24(R),25(R)-Varanoyl Coenzyme A"
@@ -48905,22 +48593,6 @@
- charge: -4
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03368m"
- - name: "24-Oxo-25(R)-Trihydroxycoprostanoyl Coenzyme A"
- - compartment: "m"
- - formula: "C48H74N7O21P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "Recon3D"
- - !!omap
- - id: "MAM03368x"
- - name: "24-Oxo-25(R)-Trihydroxycoprostanoyl Coenzyme A"
- - compartment: "x"
- - formula: "C48H74N7O21P3S"
- - charge: -4
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM01428e"
- name: "CDP-ethanolamine"
@@ -49217,14 +48889,6 @@
- charge: -1
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03325c"
- - name: "3-(Methylthio)Propionate"
- - compartment: "c"
- - formula: "C4H7O2S"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM03510c"
- name: "Methanethiol"
@@ -49433,14 +49097,6 @@
- charge: -5
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03332c"
- - name: "(8Z,11Z,14Z)-Eicosatrienoic Acid"
- - compartment: "c"
- - formula: "C20H33O2"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM02785n"
- name: "prostaglandin E1"
@@ -50065,14 +49721,6 @@
- charge: 0
- inchis: "InChI=1/C17H33NO5/c1-5-6-7-8-9-10-14(19)13-17(22)23-15(18(2,3)4)11-12-16(20)21/h14-15,19H,5-13H2,1-4H3"
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03540c"
- - name: "Lauroyl Carnitine"
- - compartment: "c"
- - formula: "C19H37NO4"
- - charge: 0
- - inchis: "InChI=1S/C19H37NO4/c1-5-6-7-8-9-10-11-12-13-14-19(23)24-17(15-18(21)22)16-20(2,3)4/h17H,5-16H2,1-4H3/t17-/m1/s1"
- - metFrom: "Recon3D"
- !!omap
- id: "MAM00042c"
- name: "(2E)-dodecenoyl-CoA"
@@ -50401,22 +50049,6 @@
- charge: 0
- inchis: "InChI=1/C25H49NO5/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-18-22(27)19-25(30)31-23(20-24(28)29)21-26(2,3)4/h22-23,27H,5-21H2,1-4H3"
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03494c"
- - name: "Malonyl Carnitine"
- - compartment: "c"
- - formula: "C10H16NO6"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- - !!omap
- - id: "MAM03494e"
- - name: "Malonyl Carnitine"
- - compartment: "e"
- - formula: "C10H16NO6"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM02635e"
- name: "O-butanoylcarnitine"
@@ -50609,14 +50241,6 @@
- charge: 0
- inchis: "InChI=1/C19H37NO5/c1-5-6-7-8-9-10-11-12-16(21)13-19(24)25-17(14-18(22)23)15-20(2,3)4/h16-17,21H,5-15H2,1-4H3"
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03540e"
- - name: "Lauroyl Carnitine"
- - compartment: "e"
- - formula: "C19H37NO4"
- - charge: 0
- - inchis: "InChI=1S/C19H37NO4/c1-5-6-7-8-9-10-11-12-13-14-19(23)24-17(15-18(21)22)16-20(2,3)4/h17H,5-16H2,1-4H3/t17-/m1/s1"
- - metFrom: "Recon3D"
- !!omap
- id: "MAM03541e"
- name: "Dodecenoyl Carnitine"
@@ -54209,14 +53833,6 @@
- charge: 0
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03332e"
- - name: "(8Z,11Z,14Z)-Eicosatrienoic Acid"
- - compartment: "e"
- - formula: "C20H33O2"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM00378e"
- name: "15(S)-HETrE"
@@ -55065,14 +54681,6 @@
- charge: -1
- inchis: ""
- metFrom: "Recon3D"
- - !!omap
- - id: "MAM03231c"
- - name: "3-Hydroxyphenylpropionic Acid (3-Hppa)"
- - compartment: "c"
- - formula: "C9H9O3"
- - charge: -1
- - inchis: ""
- - metFrom: "Recon3D"
- !!omap
- id: "MAM02622e"
- name: "normetanephrine"
@@ -67577,6 +67185,502 @@
- charge: -1
- inchis: ""
- metFrom: ""
+ - !!omap
+ - id: "MAM20071r"
+ - name: "N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sphinganine"
+ - compartment: "r"
+ - formula: "C38H69NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01362g"
+ - name: "arachidonate"
+ - compartment: "g"
+ - formula: "C20H31O2"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20071g"
+ - name: "N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sphinganine"
+ - compartment: "g"
+ - formula: "C38H69NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20070r"
+ - name: "N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-(4R)-hydroxysphinganine"
+ - compartment: "r"
+ - formula: "C38H69NO4"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20070g"
+ - name: "N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-(4R)-hydroxysphinganine"
+ - compartment: "g"
+ - formula: "C38H69NO4"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20068r"
+ - name: "N-(11Z-eicosenoyl)-sphing-4-enine"
+ - compartment: "r"
+ - formula: "C38H73NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01584g"
+ - name: "cis-gondoic acid"
+ - compartment: "g"
+ - formula: "C20H37O2"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20068g"
+ - name: "N-(11Z-eicosenoyl)-sphing-4-enine"
+ - compartment: "g"
+ - formula: "C38H73NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20069r"
+ - name: "N-(11Z-eicosenoyl)-sphinganine"
+ - compartment: "r"
+ - formula: "C38H75NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20069g"
+ - name: "N-(11Z-eicosenoyl)-sphinganine"
+ - compartment: "g"
+ - formula: "C38H75NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20067r"
+ - name: "N-(11Z-eicosenoyl)-(4R)-hydroxysphinganine"
+ - compartment: "r"
+ - formula: "C38H75NO4"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20067g"
+ - name: "N-(11Z-eicosenoyl)-(4R)-hydroxysphinganine"
+ - compartment: "g"
+ - formula: "C38H75NO4"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20073r"
+ - name: "N-(9Z-octadecenoyl)-sphing-4-enine"
+ - compartment: "r"
+ - formula: "C36H69NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20073g"
+ - name: "N-(9Z-octadecenoyl)-sphing-4-enine"
+ - compartment: "g"
+ - formula: "C36H69NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01778g"
+ - name: "elaidate"
+ - compartment: "g"
+ - formula: "C18H33O2"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20074r"
+ - name: "N-(9Z-octadecenoyl)-sphinganine"
+ - compartment: "r"
+ - formula: "C36H71NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20074g"
+ - name: "N-(9Z-octadecenoyl)-sphinganine"
+ - compartment: "g"
+ - formula: "C36H71NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20072r"
+ - name: "N-(9Z-octadecenoyl)-(4R)-hydroxysphinganine"
+ - compartment: "r"
+ - formula: "C36H71NO4"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20072g"
+ - name: "N-(9Z-octadecenoyl)-(4R)-hydroxysphinganine"
+ - compartment: "g"
+ - formula: "C36H71NO4"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01806m"
+ - name: "farnesyl-PP"
+ - compartment: "m"
+ - formula: "C15H25O7P2"
+ - charge: -3
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20064m"
+ - name: "Fe(II)-heme o"
+ - compartment: "m"
+ - formula: "C49H56FeN4O5"
+ - charge: -2
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20064c"
+ - name: "Fe(II)-heme o"
+ - compartment: "c"
+ - formula: "C49H56FeN4O5"
+ - charge: -2
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01806n"
+ - name: "farnesyl-PP"
+ - compartment: "n"
+ - formula: "C15H25O7P2"
+ - charge: -3
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM02049n"
+ - name: "heme"
+ - compartment: "n"
+ - formula: "C34H30FeN4O4"
+ - charge: -2
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20064n"
+ - name: "Fe(II)-heme o"
+ - compartment: "n"
+ - formula: "C49H56FeN4O5"
+ - charge: -2
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM03652c"
+ - name: "Hexadecenoyl Ethanolamide, C16:1-Ethanolamide (Delta 9)"
+ - compartment: "c"
+ - formula: "C18H37NO2"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM03550c"
+ - name: "C12:0-Ethanolamide, Didecanoyl Ethanolamide"
+ - compartment: "c"
+ - formula: "C14H29NO2"
+ - charge: 0
+ - inchis: "InChI=1S/C14H29NO2/c1-2-3-4-5-6-7-8-9-10-11-14(17)15-12-13-16/h16H,2-13H2,1H3,(H,15,17)"
+ - metFrom: ""
+ - !!omap
+ - id: "MAM03977c"
+ - name: "C14:0-Ethanolamide, Tetradecanoyl Ethanolamide"
+ - compartment: "c"
+ - formula: "C16H33NO2"
+ - charge: 0
+ - inchis: "InChI=1S/C16H33NO2/c1-2-3-4-5-6-7-8-9-10-11-12-13-16(19)17-14-15-18/h18H,2-15H2,1H3,(H,17,19)"
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20076n"
+ - name: "N-hexadecanoylsphing-4-enine"
+ - compartment: "c"
+ - formula: "C34H67NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20075c"
+ - name: "N-dodecanoylsphing-4-enine"
+ - compartment: "c"
+ - formula: "C30H59NO3"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01657r"
+ - name: "dehydrodolichol-diphosphate"
+ - compartment: "r"
+ - formula: "C100H161O7P2"
+ - charge: -3
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01252n"
+ - name: "acetate"
+ - compartment: "n"
+ - formula: "C2H3O2"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01288n"
+ - name: "ADP-ribose"
+ - compartment: "n"
+ - formula: "C15H21N5O14P2"
+ - charge: -2
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20077n"
+ - name: "2-O-acetyl-ADP-D-ribose"
+ - compartment: "n"
+ - formula: "C17H23N5O15P2"
+ - charge: -2
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM02583n"
+ - name: "nicotinamide"
+ - compartment: "n"
+ - formula: "C6H6N2O"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20063n"
+ - name: "alpha-NAD(+)"
+ - compartment: "n"
+ - formula: "C21H26N7O14P2"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20062n"
+ - name: "3-O-acetyl-ADP-D-ribose"
+ - compartment: "n"
+ - formula: "C17H23N5O15P2"
+ - charge: -2
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20066c"
+ - name: "menaquinol-4"
+ - compartment: "c"
+ - formula: "C31H42O2"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20065c"
+ - name: "menadiol"
+ - compartment: "c"
+ - formula: "C11H10O2"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20066r"
+ - name: "menaquinol-4"
+ - compartment: "r"
+ - formula: "C31H42O2"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM03590r"
+ - name: "2-Trans,6-Trans,10-Trans-Geranylgeranyl Diphosphate"
+ - compartment: "r"
+ - formula: "C20H33O7P2"
+ - charge: -3
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20065r"
+ - name: "menadiol"
+ - compartment: "r"
+ - formula: "C11H10O2"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20066g"
+ - name: "menaquinol-4"
+ - compartment: "g"
+ - formula: "C31H42O2"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM02759g"
+ - name: "PPi"
+ - compartment: "g"
+ - formula: "HO7P2"
+ - charge: -3
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM03590g"
+ - name: "2-Trans,6-Trans,10-Trans-Geranylgeranyl Diphosphate"
+ - compartment: "g"
+ - formula: "C20H33O7P2"
+ - charge: -3
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20065g"
+ - name: "menadiol"
+ - compartment: "g"
+ - formula: "C11H10O2"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20066n"
+ - name: "menaquinol-4"
+ - compartment: "n"
+ - formula: "C31H42O2"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM03590n"
+ - name: "2-Trans,6-Trans,10-Trans-Geranylgeranyl Diphosphate"
+ - compartment: "n"
+ - formula: "C20H33O7P2"
+ - charge: -3
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM20065n"
+ - name: "menadiol"
+ - compartment: "n"
+ - formula: "C11H10O2"
+ - charge: 0
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM00767c"
+ - name: "3-decaprenyl-4-hydroxybenzoate"
+ - compartment: "c"
+ - formula: "C57H85O3"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM00995r"
+ - name: "4-hydroxybenzoate"
+ - compartment: "r"
+ - formula: "C7H5O3"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01316r"
+ - name: "all-trans-decaprenyl-diphosphate"
+ - compartment: "r"
+ - formula: "C50H81O7P2"
+ - charge: -3
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM00767r"
+ - name: "3-decaprenyl-4-hydroxybenzoate"
+ - compartment: "r"
+ - formula: "C57H85O3"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM00995g"
+ - name: "4-hydroxybenzoate"
+ - compartment: "g"
+ - formula: "C7H5O3"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01316g"
+ - name: "all-trans-decaprenyl-diphosphate"
+ - compartment: "g"
+ - formula: "C50H81O7P2"
+ - charge: -3
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM00767g"
+ - name: "3-decaprenyl-4-hydroxybenzoate"
+ - compartment: "g"
+ - formula: "C57H85O3"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM00995n"
+ - name: "4-hydroxybenzoate"
+ - compartment: "n"
+ - formula: "C7H5O3"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01316n"
+ - name: "all-trans-decaprenyl-diphosphate"
+ - compartment: "n"
+ - formula: "C50H81O7P2"
+ - charge: -3
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM00767n"
+ - name: "3-decaprenyl-4-hydroxybenzoate"
+ - compartment: "n"
+ - formula: "C57H85O3"
+ - charge: -1
+ - inchis: ""
+ - metFrom: ""
+ - !!omap
+ - id: "MAM01435m"
+ - name: "chenodiol"
+ - compartment: "m"
+ - formula: "C24H39O4"
+ - charge: -1
+ - inchis: ""
+ - metFrom: "HMRdatabase"
+ - !!omap
+ - id: "MAM01729e"
+ - name: "dodecanoylcarnitine"
+ - compartment: "e"
+ - formula: "C19H37NO4"
+ - charge: 0
+ - inchis: ""
+ - metFrom: "HMRdatabase"
+ - !!omap
+ - id: "MAM00853c"
+ - name: "3-oxo-all-cis-6,9,12,15,18-tetracosapentaenoyl-CoA"
+ - compartment: "c"
+ - formula: "C45H66N7O18P3S"
+ - charge: -4
+ - inchis: ""
+ - metFrom: "Recon3D"
- reactions:
- !!omap
- id: "MAR03905"
@@ -67963,7 +68067,7 @@
- MAM02751c: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000172331"
+ - gene_reaction_rule: "ENSG00000119640 or ENSG00000170634"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "3.1.3.13"
@@ -70531,8 +70635,8 @@
- gene_reaction_rule: "ENSG00000111271 or ENSG00000117054 or ENSG00000122971 or ENSG00000151498 or ENSG00000177646 or ENSG00000196177 or ENSG00000240303"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "1.3.99.3"
- - references: ""
+ - eccodes: "1.3.99.3;1.3.8.7"
+ - references: "PMID:10502673;PMID:3597357;PMID:4062874"
- subsystem:
- "Propanoate metabolism"
- confidence_score: 0
@@ -72642,8 +72746,8 @@
- name: "Xanthine:oxygen oxidoreductase"
- metabolites: !!omap
- MAM02040x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03120x: 1
- MAM03148x: -1
- lower_bound: 0
@@ -73146,9 +73250,9 @@
- name: "Hypoxanthine:oxygen oxidoreductase"
- metabolites: !!omap
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02159x: -1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03148x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -73513,7 +73617,7 @@
- MAM02990c: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000184470 or ENSG00000197763 or ENSG00000198431"
+ - gene_reaction_rule: "ENSG00000197763 or ENSG00000198431"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "1.8.1.9"
@@ -74339,9 +74443,9 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000100024"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "3.5.1.6"
- - references: "PMID:10542323;PMID:3678231"
+ - references: "PMID:10542323;PMID:3678231;PMID:11508704;PMID:5773299"
- subsystem:
- "Pyrimidine metabolism"
- confidence_score: 0
@@ -76702,11 +76806,11 @@
- MAM02990m: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000184470 or ENSG00000197763 or ENSG00000198431"
+ - gene_reaction_rule: "ENSG00000184470"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "1.8.1.9"
- - references: ""
+ - references: "PMID:5553404;PMID:5671058"
- subsystem:
- "Nucleotide metabolism"
- confidence_score: 0
@@ -77104,7 +77208,7 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000021826"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "6.3.4.16"
- references: "PMID:15897806;PMID:175068;PMID:2893372;PMID:3886433;PMID:4347313;PMID:7248316"
- subsystem:
@@ -77530,9 +77634,9 @@
- MAM01641x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02633x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -77784,25 +77888,6 @@
- subsystem:
- "Arginine and proline metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR03838"
- - name: ""
- - metabolites: !!omap
- - MAM00559m: -1
- - MAM02039m: -1
- - MAM02770m: 1
- - MAM03102m: -1
- - MAM03103m: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000100033 or ENSG00000250799"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.5.99.8"
- - references: "PMID:18506409"
- - subsystem:
- - "Arginine and proline metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR03895"
- name: "ATP:L-glutamate 5-phosphotransferase"
@@ -77849,7 +77934,7 @@
- MAM02039m: 1
- MAM02040m: -1
- MAM02046m: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000169239 or ENSG00000174990"
- rxnNotes: ""
@@ -78424,9 +78509,9 @@
- metabolites: !!omap
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02925x: 1
- MAM02926x: -1
- lower_bound: 0
@@ -78487,9 +78572,9 @@
- metabolites: !!omap
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02924x: 1
- MAM02925x: -1
- lower_bound: 0
@@ -78607,9 +78692,9 @@
- metabolites: !!omap
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02921x: 1
- MAM02923x: -1
- lower_bound: 0
@@ -78670,9 +78755,9 @@
- metabolites: !!omap
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02922x: 1
- MAM02923x: -1
- lower_bound: 0
@@ -78733,9 +78818,9 @@
- metabolites: !!omap
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02920x: 1
- MAM02921x: -1
- lower_bound: 0
@@ -78796,9 +78881,9 @@
- metabolites: !!omap
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02920x: 1
- MAM02922x: -1
- lower_bound: 0
@@ -78932,9 +79017,9 @@
- metabolites: !!omap
- MAM01250x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02504x: -1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02923x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -78991,9 +79076,9 @@
- metabolites: !!omap
- MAM01250x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02503x: -1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02812x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -79031,10 +79116,10 @@
- metabolites: !!omap
- MAM01250x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02501x: -1
- MAM02503x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000088826 or ENSG00000148832"
@@ -79458,7 +79543,7 @@
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "1.5.99.8"
- - references: ""
+ - references: "PMID:18506409"
- subsystem:
- "Arginine and proline metabolism"
- confidence_score: 0
@@ -79549,11 +79634,11 @@
- MAM02468m: -1
- lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000196177"
+ - gene_reaction_rule: "ENSG00000122971 or ENSG00000196177"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.5"
- - references: ""
+ - eccodes: "1.3.8.5;1.3.8.1;1.3.99.12"
+ - references: "PMID:12855692;PMID:6401712;PMID:6874697;PMID:3597357"
- subsystem:
- "Glycine, serine and threonine metabolism"
- confidence_score: 0
@@ -79567,11 +79652,11 @@
- MAM02189m: 1
- lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000196177"
+ - gene_reaction_rule: "ENSG00000128928 or ENSG00000196177"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.5"
- - references: ""
+ - eccodes: "1.3.8.4;1.3.8.5"
+ - references: "PMID:3597357;PMID:9214289"
- subsystem:
- "Glycine, serine and threonine metabolism"
- confidence_score: 0
@@ -79642,11 +79727,11 @@
- MAM02999m: 1
- lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000196177"
+ - gene_reaction_rule: "ENSG00000122971 or ENSG00000196177"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.5"
- - references: ""
+ - eccodes: "1.3.8.5;1.3.8.1;1.3.99.12"
+ - references: "PMID:6401712"
- subsystem:
- "Glycine, serine and threonine metabolism"
- confidence_score: 0
@@ -79768,8 +79853,8 @@
- MAM01831x: 1
- MAM01986x: 1
- MAM02040x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM02880x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -80216,9 +80301,9 @@
- MAM02007x: 1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000110887"
@@ -81324,10 +81409,10 @@
- MAM01157x: 1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02426x: -1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: ""
@@ -81380,9 +81465,9 @@
- metabolites: !!omap
- MAM00556x: 1
- MAM02039x: 1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02413x: -1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000179761"
@@ -81598,41 +81683,6 @@
- subsystem:
- "Tryptophan metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR08564"
- - name: ""
- - metabolites: !!omap
- - MAM00926c: 1
- - MAM01306c: -1
- - MAM01974c: 1
- - MAM02319c: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000109576 or ENSG00000137944 or ENSG00000171097"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "2.6.1.7"
- - references: ""
- - subsystem:
- - "Tryptophan metabolism"
- - confidence_score: 0
- - !!omap
- - id: "MAR08565"
- - name: ""
- - metabolites: !!omap
- - MAM00926c: -1
- - MAM00990c: 1
- - MAM02040c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Tryptophan metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR08566"
- name: ""
@@ -81942,9 +81992,9 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000002726 or ENSG00000131471 or ENSG00000131480"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "1.4.3.6;1.4.3.21;1.4.3.22"
- - references: ""
+ - references: "PMID:11136547;PMID:14715500;PMID:9131641"
- subsystem:
- "Tyrosine metabolism"
- confidence_score: 0
@@ -82152,42 +82202,6 @@
- subsystem:
- "Tyrosine metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR09733"
- - name: ""
- - metabolites: !!omap
- - MAM01596c: 1
- - MAM02039c: -1
- - MAM02355c: -1
- - MAM03162c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Tyrosine metabolism"
- - confidence_score: 0
- - !!omap
- - id: "MAR09734"
- - name: "5,6-dihydroxyindole:oxygen oxidoreductase"
- - metabolites: !!omap
- - MAM02040c: 2
- - MAM02630c: -1
- - MAM03162c: -2
- - MAM03163c: 2
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000077498"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.14.18.1"
- - references: ""
- - subsystem:
- - "Tyrosine metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR03206"
- name: "acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase"
@@ -82227,24 +82241,6 @@
- subsystem:
- "Valine, leucine, and isoleucine metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR03211"
- - name: ""
- - metabolites: !!omap
- - MAM01265m: 1
- - MAM02774m: -1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000117054"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.7"
- - references: "PMID:10502673;PMID:3597357;PMID:4062874"
- - subsystem:
- - "Valine, leucine, and isoleucine metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR03213"
- name: "Methylmalonyl-CoA epimerase"
@@ -82688,26 +82684,6 @@
- subsystem:
- "Phenylalanine, tyrosine and tryptophan biosynthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR03940"
- - name: "L-Phenylalanine,tetrahydrobiopterin:oxygen oxidoreductase (4-hydroxylating)"
- - metabolites: !!omap
- - MAM01698c: 1
- - MAM02040c: 1
- - MAM02630c: -1
- - MAM02724c: -1
- - MAM02978c: -1
- - MAM03101c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000171759"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.14.16.1"
- - references: "PMID:3298976;PMID:4074362"
- - subsystem:
- - "Phenylalanine, tyrosine and tryptophan biosynthesis"
- - confidence_score: 0
- !!omap
- id: "MAR04214"
- name: "L-tryptophan:oxygen 2,3-oxidoreductase (decyclizing)"
@@ -82807,14 +82783,14 @@
- id: "MAR04222"
- name: ""
- metabolites: !!omap
- - MAM00990c: -1
- - MAM01306c: 1
- - MAM01974c: -1
- - MAM02040c: -1
- - MAM02319c: 1
- - lower_bound: -1000
+ - MAM00990c: 1
+ - MAM01306c: -1
+ - MAM01974c: 1
+ - MAM02040c: 1
+ - MAM02319c: -1
+ - lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000109576 or ENSG00000137944 or ENSG00000171097"
+ - gene_reaction_rule: "ENSG00000137944 or ENSG00000171097"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "2.6.1.7"
@@ -82955,26 +82931,6 @@
- subsystem:
- "Phenylalanine, tyrosine and tryptophan biosynthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR04242"
- - name: "glutaryl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase (decarboxylating)"
- - metabolites: !!omap
- - MAM01596m: 1
- - MAM01622m: 1
- - MAM01977m: -1
- - MAM02039m: -1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000105607"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.6"
- - references: "PMID:3081514"
- - subsystem:
- - "Phenylalanine, tyrosine and tryptophan biosynthesis"
- - confidence_score: 0
- !!omap
- id: "MAR04243"
- name: "glutaryl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase (decarboxylating)"
@@ -82991,7 +82947,7 @@
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "1.3.8.6"
- - references: ""
+ - references: "PMID:3081514"
- subsystem:
- "Phenylalanine, tyrosine and tryptophan biosynthesis"
- confidence_score: 0
@@ -85681,7 +85637,7 @@
- MAM02871c: -1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000101444 or ENSG00000158467 or ENSG00000168710"
+ - gene_reaction_rule: "ENSG00000101444 or ENSG00000158467"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "3.3.1.1"
@@ -85928,7 +85884,7 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000116761"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "4.4.1.1;4.4.1.8"
- references: "PMID:10212249;PMID:629532"
- subsystem:
@@ -86226,7 +86182,7 @@
- MAM02986c: -1
- lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000083123 or ENSG00000091140 or ENSG00000117592 or ENSG00000121053 or ENSG00000130508 or ENSG00000142046 or ENSG00000167419 or ENSG00000248098"
+ - gene_reaction_rule: "ENSG00000117592 or ENSG00000121053 or ENSG00000130508 or ENSG00000142046 or ENSG00000167419"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "1.11.1.7;1.2.4.4;1.8.1.4"
@@ -86931,7 +86887,7 @@
- gene_reaction_rule: "ENSG00000143149"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: ""
+ - eccodes: "1.2.1.19"
- references: ""
- subsystem:
- "Beta-alanine metabolism"
@@ -86988,9 +86944,9 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000002726 or ENSG00000131471 or ENSG00000131480"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "1.4.3.6;1.4.3.21;1.4.3.22"
- - references: ""
+ - references: "PMID:15035803;PMID:8920635;PMID:9653080"
- subsystem:
- "Beta-alanine metabolism"
- confidence_score: 0
@@ -87180,7 +87136,7 @@
- MAM02890c: 1
- lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000101444 or ENSG00000158467 or ENSG00000168710"
+ - gene_reaction_rule: "ENSG00000101444 or ENSG00000158467"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "3.3.1.1"
@@ -87315,9 +87271,9 @@
- MAM01638x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02819x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -87356,9 +87312,9 @@
- MAM01640x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000110887"
@@ -87377,9 +87333,9 @@
- MAM01740x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02578x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000110887"
@@ -87410,24 +87366,6 @@
- subsystem:
- "Valine, leucine, and isoleucine metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR03751"
- - name: ""
- - metabolites: !!omap
- - MAM02180m: -1
- - MAM02468m: 1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000122971 or ENSG00000196177"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.1;1.3.99.12"
- - references: "PMID:12855692;PMID:6401712;PMID:6874697;PMID:3597357"
- - subsystem:
- - "Valine, leucine, and isoleucine metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR03753"
- name: "(S)-3-Hydroxyisobutyryl-CoA hydro-lyase"
@@ -87458,9 +87396,9 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000198130"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "3.1.2.4"
- - references: "PMID:11580916;PMID:8188708"
+ - references: "PMID:11580916;PMID:8188708;PMID:8824301"
- subsystem:
- "Valine, leucine, and isoleucine metabolism"
- confidence_score: 0
@@ -87503,44 +87441,6 @@
- subsystem:
- "Valine, leucine, and isoleucine metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR03767"
- - name: "4-methyl-2-oxopentanoate:NAD+ oxidoreductase (CoA-mehtylpropanoylating)"
- - metabolites: !!omap
- - MAM01013m: -1
- - MAM01596m: 1
- - MAM01597m: -1
- - MAM02189m: 1
- - MAM02552m: -1
- - MAM02553m: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000083123 and ENSG00000142046 and ENSG00000248098"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.2.1.25"
- - references: ""
- - subsystem:
- - "Valine, leucine, and isoleucine metabolism"
- - confidence_score: 0
- - !!omap
- - id: "MAR03769"
- - name: "3-methylbutanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase"
- - metabolites: !!omap
- - MAM00826m: -1
- - MAM02189m: 1
- - MAM03102m: -1
- - MAM03103m: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000128928"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.4"
- - references: "PMID:3597357;PMID:9214289"
- - subsystem:
- - "Valine, leucine, and isoleucine metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR03773"
- name: "3-Methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)"
@@ -87599,24 +87499,6 @@
- subsystem:
- "Valine, leucine, and isoleucine metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR03783"
- - name: "(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase"
- - metabolites: !!omap
- - MAM00663m: -1
- - MAM02999m: 1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000122971 or ENSG00000196177"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.1;1.3.99.12"
- - references: "PMID:6401712"
- - subsystem:
- - "Valine, leucine, and isoleucine metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR03785"
- name: "(2S,3S)-3-Hydroxy-2-methylbutanoyl-CoA hydro-liase"
@@ -92082,64 +91964,6 @@
- subsystem:
- "Protein assembly"
- confidence_score: 0
- - !!omap
- - id: "MAR05173"
- - name: ""
- - metabolites: !!omap
- - MAM01285c: 1404
- - MAM01371c: -1404
- - MAM02006c: -28
- - MAM02039c: 1863
- - MAM02040c: -1405
- - MAM02335c: -31
- - MAM02340c: -19
- - MAM02341c: -19
- - MAM02342c: -27
- - MAM02351c: -19
- - MAM02376c: -16
- - MAM02377c: -34
- - MAM02380c: -13
- - MAM02401c: -29
- - MAM02404c: -47
- - MAM02405c: -33
- - MAM02408c: -15
- - MAM02412c: -22
- - MAM02415c: -20
- - MAM02416c: -37
- - MAM02419c: -18
- - MAM02421c: -14
- - MAM02423c: -27
- - MAM02751c: 1404
- - MAM02757c: 1
- - MAM03063c: 31
- - MAM03064c: 19
- - MAM03065c: 19
- - MAM03066c: 27
- - MAM03067c: 19
- - MAM03068c: 16
- - MAM03069c: 34
- - MAM03070c: 28
- - MAM03071c: 13
- - MAM03072c: 29
- - MAM03073c: 47
- - MAM03074c: 33
- - MAM03075c: 15
- - MAM03076c: 22
- - MAM03077c: 20
- - MAM03078c: 37
- - MAM03079c: 18
- - MAM03081c: 14
- - MAM03082c: 27
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Protein assembly"
- - confidence_score: 0
- !!omap
- id: "MAR05174"
- name: ""
@@ -93571,45 +93395,6 @@
- subsystem:
- "Protein degradation"
- confidence_score: 0
- - !!omap
- - id: "MAR05289"
- - name: ""
- - metabolites: !!omap
- - MAM01285l: 467
- - MAM01307l: 31
- - MAM01365l: 19
- - MAM01369l: 19
- - MAM01370l: 27
- - MAM01371l: -467
- - MAM01628l: 19
- - MAM01974l: 34
- - MAM01975l: 16
- - MAM01986l: 28
- - MAM02039l: 476
- - MAM02040l: -934
- - MAM02125l: 13
- - MAM02184l: 29
- - MAM02360l: 47
- - MAM02426l: 33
- - MAM02471l: 15
- - MAM02724l: 22
- - MAM02751l: 467
- - MAM02757l: -1
- - MAM02770l: 20
- - MAM02896l: 37
- - MAM02993l: 18
- - MAM03101l: 14
- - MAM03135l: 27
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000064601 or ENSG00000100448 or ENSG00000100600 or ENSG00000101160 or ENSG00000103811 or ENSG00000109861 or ENSG00000117984 or ENSG00000135047 or ENSG00000136943 or ENSG00000143387 or ENSG00000163131 or ENSG00000164733 or ENSG00000166340 or ENSG00000172543 or ENSG00000174080 or ENSG00000196188 or ENSG00000256043"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Protein degradation"
- - confidence_score: 0
- !!omap
- id: "MAR05290"
- name: ""
@@ -93773,12 +93558,13 @@
- id: "MAR05407"
- name: "carbonate hydro-lyase (carbon-dioxide-forming)"
- metabolites: !!omap
- - MAM01421e: 1
- MAM01596e: -1
+ - MAM02039e: 1
- MAM02040e: -1
+ - MAM02046e: 1
- lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000074410 or ENSG00000104267 or ENSG00000107159 or ENSG00000118298 or ENSG00000131686 or ENSG00000133742 or ENSG00000159593 or ENSG00000164879 or ENSG00000167434 or ENSG00000168748 or ENSG00000169239 or ENSG00000174990 or ENSG00000185015"
+ - gene_reaction_rule: "ENSG00000074410 or ENSG00000104267 or ENSG00000107159 or ENSG00000118298 or ENSG00000131686 or ENSG00000167434"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "4.2.1.1"
@@ -94017,16 +93803,16 @@
- id: "MAR08664"
- name: "(3S)-citramalyl-CoA hydro-lyase (itaconyl-CoA-forming)"
- metabolites: !!omap
- - MAM00084m: -1
- - MAM02040m: 1
- - MAM02192m: 1
- - lower_bound: -1000
+ - MAM00084m: 1
+ - MAM02040m: -1
+ - MAM02192m: -1
+ - lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: ""
+ - gene_reaction_rule: "ENSG00000148090"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "4.2.1.56"
- - references: ""
+ - references: "PMID:29056341"
- subsystem:
- "C5-branched dibasic acid metabolism"
- confidence_score: 0
@@ -94056,11 +93842,11 @@
- MAM02819m: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: ""
+ - gene_reaction_rule: "ENSG00000125246"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "4.1.3.25"
- - references: ""
+ - references: "PMID:24334609"
- subsystem:
- "C5-branched dibasic acid metabolism"
- confidence_score: 0
@@ -94239,16 +94025,16 @@
- id: "MAR04145"
- name: "acetyl-CoA:oxaloacetate C-acetyltransferase (thioester-hydrolysing)"
- metabolites: !!omap
- - MAM01261m: 1
- - MAM01587m: -1
- - MAM01597m: -1
- - MAM02039m: -1
- - MAM02040m: 1
- - MAM02633m: 1
- - lower_bound: -1000
+ - MAM01261m: -1
+ - MAM01587m: 1
+ - MAM01597m: 1
+ - MAM02039m: 1
+ - MAM02040m: -1
+ - MAM02633m: -1
+ - lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000062485"
- - rxnNotes: ""
+ - rxnNotes: "Essentials of Medical Biochemistry: With Clinical Cases (2011) page 130, ISBN:978008091688"
- rxnFrom: "HMRdatabase"
- eccodes: "2.3.3.1;2.3.3.3"
- references: "PMID:12549038"
@@ -94456,23 +94242,6 @@
- subsystem:
- "Tricarboxylic acid cycle and glyoxylate/dicarboxylate metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR05294"
- - name: "citrate oxaloacetate-lyase (forming acetate from the pro-S carboxymethyl group of citrate)"
- - metabolites: !!omap
- - MAM01252m: 1
- - MAM01587m: -1
- - MAM02633m: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000125246"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "4.1.-.-"
- - references: "PMID:11741334"
- - subsystem:
- - "Tricarboxylic acid cycle and glyoxylate/dicarboxylate metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR06413"
- name: ""
@@ -94516,8 +94285,8 @@
- MAM02007x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM02661x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -94535,8 +94304,8 @@
- metabolites: !!omap
- MAM01998x: -1
- MAM02007x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000101323 or ENSG00000116882"
@@ -94547,24 +94316,6 @@
- subsystem:
- "Tricarboxylic acid cycle and glyoxylate/dicarboxylate metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR08743"
- - name: "succinate:FAD oxidoreductase"
- - metabolites: !!omap
- - MAM01802m: 1
- - MAM01803m: -1
- - MAM01862m: -1
- - MAM02943m: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000073578 and ENSG00000117118 and ENSG00000143252 and ENSG00000204370"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.5.1"
- - references: ""
- - subsystem:
- - "Tricarboxylic acid cycle and glyoxylate/dicarboxylate metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR08772"
- name: ""
@@ -94818,11 +94569,11 @@
- MAM03103m: -1
- lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000073578 and ENSG00000117118 and ENSG00000143252 and ENSG00000204370"
+ - gene_reaction_rule: "ENSG00000140374 or ENSG00000105379 or ENSG00000171503 or ENSG00000100033 or ENSG00000250799 or ENSG00000115159 or ENSG00000102967 or ENSG00000016391"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "1.5.5.1"
- - references: ""
+ - references: "PMID:34428349"
- subsystem:
- "Oxidative phosphorylation"
- confidence_score: 0
@@ -95068,8 +94819,8 @@
- name: "superoxide:superoxide oxidoreductase"
- metabolites: !!omap
- MAM02039x: -2
- - MAM02041x: 1
- - MAM02630x: 1
+ - MAM01803x: 1
+ - MAM01802x: 1
- MAM02631x: -2
- lower_bound: 0
- upper_bound: 1000
@@ -97925,7 +97676,7 @@
- MAM02130c: 1
- MAM02554c: 1
- MAM02555c: -1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000169710"
- rxnNotes: ""
@@ -98046,38 +97797,14 @@
- subsystem:
- "Fatty acid biosynthesis (even-chain)"
- confidence_score: 0
- - !!omap
- - id: "MAR04156"
- - name: "acetyl-CoA:carbon-dioxide ligase (ADP-forming)"
- - metabolites: !!omap
- - MAM01261c: -1
- - MAM01285c: 1
- - MAM01371c: -1
- - MAM02039c: 1
- - MAM02046c: -1
- - MAM02444c: 1
- - MAM02751c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000076555 or ENSG00000278540"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "6.4.1.2"
- - references: "PMID:7732023;PMID:16854592;PMID:18455495;PMID:10677481;PMID:16721829;PMID:17126822;PMID:235695;PMID:24055;PMID:6116153;PMID:6116159;PMID:6116163;PMID:6138355;PMID:7732023;PMID:9099716"
- - subsystem:
- - "Fatty acid biosynthesis (even-chain)"
- - confidence_score: 0
- !!omap
- id: "MAR04295"
- name: "acetyl-CoA:carbon-dioxide ligase (ADP-forming)"
- metabolites: !!omap
- MAM01261m: -1
- - MAM01285m: 1
- - MAM01371m: -1
- - MAM02039m: 1
- - MAM02046m: -1
+ - MAM01357m: 1
+ - MAM01422m: -1
- MAM02444m: 1
- - MAM02751m: 1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000076555"
@@ -100978,49 +100705,6 @@
- subsystem:
- "Lipoic acid metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR06400"
- - name: ""
- - metabolites: !!omap
- - MAM01098c: 2
- - MAM02039c: -5
- - MAM02040c: 6
- - MAM02397c: 1
- - MAM02471c: 2
- - MAM02554c: 7
- - MAM02555c: -7
- - MAM02643c: -1
- - MAM02681c: 2
- - MAM02682c: -2
- - MAM02877c: -2
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000121897 or ENSG00000175536"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "2.8.1.8;2.3.1.181"
- - references: ""
- - subsystem:
- - "Lipoic acid metabolism"
- - confidence_score: 0
- - !!omap
- - id: "MAR06401"
- - name: "lipoyl-[acp]:protein N6-lipoyltransferase"
- - metabolites: !!omap
- - MAM00184c: 1
- - MAM00209c: 1
- - MAM01350c: -1
- - MAM02397c: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000175536"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "2.3.1.181"
- - references: ""
- - subsystem:
- - "Lipoic acid metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR06402"
- name: "octanoyl-[acp]:protein N6-octanoyltransferase"
@@ -101301,7 +100985,7 @@
- name: ""
- metabolites: !!omap
- MAM00121c: -1
- - MAM00902c: 1
+ - MAM00853c: 1
- MAM01596c: 1
- MAM01597c: 1
- MAM02039c: -1
@@ -101321,7 +101005,7 @@
- name: ""
- metabolites: !!omap
- MAM00718c: 1
- - MAM00902c: -1
+ - MAM00853c: -1
- MAM02039c: -1
- MAM02554c: 1
- MAM02555c: -1
@@ -101398,8 +101082,8 @@
- metabolites: !!omap
- MAM00113x: -1
- MAM01664x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -102434,7 +102118,7 @@
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "1.13.11.34"
- - references: ""
+ - references: "PMID:11034610"
- subsystem:
- "Omega-3 fatty acid metabolism"
- confidence_score: 0
@@ -102455,24 +102139,6 @@
- subsystem:
- "Omega-3 fatty acid metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR02588"
- - name: ""
- - metabolites: !!omap
- - MAM00029c: -1
- - MAM01056c: 1
- - MAM02040c: 1
- - MAM02630c: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000012779"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.13.11.34"
- - references: "PMID:11034610"
- - subsystem:
- - "Omega-3 fatty acid metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR02368"
- name: "linoleoyl-CoA,ferrocytochrome b5:oxygen oxidoreductase (6,7 cis-dehydrogenating)"
@@ -102755,9 +102421,9 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000099797 or ENSG00000205678"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "1.3.1.93"
- - references: "PMID:10970790;PMID:10970790"
+ - references: "PMID:10970790;PMID:10970790;PMID:10970790"
- subsystem:
- "Omega-6 fatty acid metabolism"
- confidence_score: 0
@@ -102787,8 +102453,8 @@
- name: ""
- metabolites: !!omap
- MAM00110x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03028x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -103349,8 +103015,8 @@
- metabolites: !!omap
- MAM00682x: 1
- MAM01364x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -103454,8 +103120,8 @@
- metabolites: !!omap
- MAM00073x: 1
- MAM01934x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -103526,8 +103192,8 @@
- metabolites: !!omap
- MAM00072x: 1
- MAM00091x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -103649,10 +103315,10 @@
- MAM02630c: -1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000021461 or ENSG00000100197 or ENSG00000106258 or ENSG00000108242 or ENSG00000130649 or ENSG00000134716 or ENSG00000137869 or ENSG00000138061 or ENSG00000138109 or ENSG00000138115 or ENSG00000140465 or ENSG00000140505 or ENSG00000142973 or ENSG00000155016 or ENSG00000160868 or ENSG00000160870 or ENSG00000165841 or ENSG00000167600 or ENSG00000171903 or ENSG00000186160 or ENSG00000186204 or ENSG00000186377 or ENSG00000186526 or ENSG00000197408 or ENSG00000197446 or ENSG00000197838 or ENSG00000198077 or ENSG00000255974"
+ - gene_reaction_rule: "ENSG00000021461 or ENSG00000100197 or ENSG00000106258 or ENSG00000108242 or ENSG00000130649 or ENSG00000134716 or ENSG00000137869 or ENSG00000138061 or ENSG00000138109 or ENSG00000138115 or ENSG00000140465 or ENSG00000140505 or ENSG00000142973 or ENSG00000155016 or ENSG00000160868 or ENSG00000160870 or ENSG00000165841 or ENSG00000167600 or ENSG00000171903 or ENSG00000186160 or ENSG00000186204 or ENSG00000186377 or ENSG00000186526 or ENSG00000197408 or ENSG00000197446 or ENSG00000197838 or ENSG00000198077 or ENSG00000255974 or ENSG00000162365 or ENSG00000187048"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "1.14.14.1"
+ - eccodes: "1.14.14.1;1.14.15.3"
- references: ""
- subsystem:
- "Arachidonic acid metabolism"
@@ -103783,27 +103449,6 @@
- subsystem:
- "Arachidonic acid metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR00941"
- - name: "Arachidonic acid:oxygen 1-oxidoreductase"
- - metabolites: !!omap
- - MAM00591c: 1
- - MAM01362c: -1
- - MAM02039c: -1
- - MAM02040c: 1
- - MAM02554c: 1
- - MAM02555c: -1
- - MAM02630c: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000162365 or ENSG00000187048"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.14.15.3"
- - references: ""
- - subsystem:
- - "Arachidonic acid metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR00942"
- name: ""
@@ -104899,8 +104544,8 @@
- metabolites: !!omap
- MAM00380x: -1
- MAM01058x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000012779"
@@ -107090,8 +106735,8 @@
- metabolites: !!omap
- MAM01119x: 1
- MAM01120x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -107558,8 +107203,8 @@
- metabolites: !!omap
- MAM01121x: 1
- MAM01122x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -108159,8 +107804,8 @@
- metabolites: !!omap
- MAM00026x: 1
- MAM00582x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -108421,8 +108066,8 @@
- metabolites: !!omap
- MAM00258x: -1
- MAM01037x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -108738,8 +108383,8 @@
- metabolites: !!omap
- MAM00027x: 1
- MAM00587x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -108828,8 +108473,8 @@
- name: ""
- metabolites: !!omap
- MAM00423x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM02650x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -108957,8 +108602,8 @@
- metabolites: !!omap
- MAM00015x: 1
- MAM02039x: -3
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM02652x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -110588,9 +110233,9 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000110090 or ENSG00000169169 or ENSG00000205560"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "2.3.1.21"
- - references: ""
+ - references: "PMID:12828998;PMID:9498103;PMID:3955080"
- subsystem:
- "Carnitine shuttle (cytosolic)"
- confidence_score: 0
@@ -116136,7 +115781,7 @@
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "1.1.5.3"
- - references: "PMID:7821823;PMID:8687421;PMID:8163052"
+ - references: "PMID:11955283;PMID:2115809;PMID:2923620;PMID:3338458;PMID:340460;PMID:8401296;PMID:8549872;PMID:8579375;PMID:9171333;PMID:9244403;PMID:9559543;PMID:7821823;PMID:8687421;PMID:8163052"
- subsystem:
- "Acylglycerides metabolism"
- confidence_score: 0
@@ -116451,10 +116096,10 @@
- MAM01597x: -11
- MAM02039x: 11
- MAM02040x: -11
- - MAM02041x: 7
+ - MAM01803x: 7
- MAM02552x: -11
- MAM02553x: 11
- - MAM02630x: -7
+ - MAM01802x: -7
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: ""
@@ -116474,10 +116119,10 @@
- MAM01597x: -11
- MAM02039x: 11
- MAM02040x: -11
- - MAM02041x: 6
+ - MAM01803x: 6
- MAM02552x: -11
- MAM02553x: 11
- - MAM02630x: -6
+ - MAM01802x: -6
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: ""
@@ -116497,10 +116142,10 @@
- MAM01597x: -11
- MAM02039x: 3
- MAM02040x: -11
- - MAM02041x: 11
+ - MAM01803x: 11
- MAM02552x: -11
- MAM02553x: 11
- - MAM02630x: -11
+ - MAM01802x: -11
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: ""
@@ -116516,9 +116161,9 @@
- name: ""
- metabolites: !!omap
- MAM00049x: 1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02110x: -1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -116588,8 +116233,8 @@
- name: ""
- metabolites: !!omap
- MAM00064x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM02971x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -116661,8 +116306,8 @@
- metabolites: !!omap
- MAM00040x: 1
- MAM01725x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -116733,8 +116378,8 @@
- metabolites: !!omap
- MAM00043x: 1
- MAM01773x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -116804,8 +116449,8 @@
- name: ""
- metabolites: !!omap
- MAM00057x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM02941x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -116876,8 +116521,8 @@
- name: ""
- metabolites: !!omap
- MAM00051x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM02678x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -116948,9 +116593,9 @@
- name: ""
- metabolites: !!omap
- MAM00066x: 1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02495x: -1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -117020,9 +116665,9 @@
- name: ""
- metabolites: !!omap
- MAM00042x: 1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02345x: -1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -117093,8 +116738,8 @@
- metabolites: !!omap
- MAM00039x: 1
- MAM01650x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -117164,8 +116809,8 @@
- name: ""
- metabolites: !!omap
- MAM00059x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM02644x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -117236,9 +116881,9 @@
- name: ""
- metabolites: !!omap
- MAM00053x: 1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02122x: -1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -117309,8 +116954,8 @@
- metabolites: !!omap
- MAM01412x: -1
- MAM01622x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -117381,10 +117026,10 @@
- MAM01597x: -10
- MAM02039x: 10
- MAM02040x: -10
- - MAM02041x: 10
+ - MAM01803x: 10
- MAM02552x: -10
- MAM02553x: 10
- - MAM02630x: -10
+ - MAM01802x: -10
- MAM02774x: 1
- MAM03047x: -1
- lower_bound: 0
@@ -117401,9 +117046,9 @@
- id: "MAR03326"
- name: ""
- metabolites: !!omap
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02112x: -1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03016x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -117474,8 +117119,8 @@
- name: ""
- metabolites: !!omap
- MAM00025x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03015x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -117546,8 +117191,8 @@
- name: ""
- metabolites: !!omap
- MAM00016x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03013x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -117618,8 +117263,8 @@
- name: ""
- metabolites: !!omap
- MAM00007x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03012x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -117689,8 +117334,8 @@
- id: "MAR03342"
- name: ""
- metabolites: !!omap
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM02647x: -1
- MAM03025x: 1
- lower_bound: 0
@@ -117762,8 +117407,8 @@
- name: ""
- metabolites: !!omap
- MAM01191x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03019x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -117834,8 +117479,8 @@
- name: ""
- metabolites: !!omap
- MAM01141x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03022x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -117917,24 +117562,6 @@
- subsystem:
- "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)"
- confidence_score: 0
- - !!omap
- - id: "MAR03364"
- - name: ""
- - metabolites: !!omap
- - MAM02041x: 1
- - MAM02630x: -1
- - MAM02677x: -1
- - MAM03020x: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.3.6"
- - references: "PMID:1047780;PMID:8973539;PMID:11135616"
- - subsystem:
- - "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)"
- - confidence_score: 0
- !!omap
- id: "MAR03365"
- name: ""
@@ -117989,24 +117616,6 @@
- subsystem:
- "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)"
- confidence_score: 0
- - !!omap
- - id: "MAR03369"
- - name: ""
- - metabolites: !!omap
- - MAM00118x: -1
- - MAM02041x: 1
- - MAM02630x: -1
- - MAM03023x: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.3.6"
- - references: "PMID:1047780;PMID:8973539;PMID:11135616"
- - subsystem:
- - "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)"
- - confidence_score: 0
- !!omap
- id: "MAR03370"
- name: ""
@@ -118107,8 +117716,8 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000140284"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "6.2.1.24"
+ - rxnFrom: "HMRdatabase;Recon3D"
+ - eccodes: "6.2.1.24;6.2.1.3"
- references: "PMID:11356164;PMID:11356164"
- subsystem:
- "Beta oxidation of phytanic acid (peroxisomal)"
@@ -118143,9 +117752,9 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000140284"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "6.2.1.24"
- - references: "PMID:11356164;PMID:11356164;PMID:10198260"
+ - references: "PMID:11356164;PMID:11356164;PMID:10198260;PMID:11591435"
- subsystem:
- "Beta oxidation of phytanic acid (peroxisomal)"
- confidence_score: 0
@@ -118227,8 +117836,8 @@
- name: ""
- metabolites: !!omap
- MAM00078x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03027x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -118300,8 +117909,8 @@
- metabolites: !!omap
- MAM00090x: 1
- MAM00948x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -118388,8 +117997,8 @@
- metabolites: !!omap
- MAM00079x: 1
- MAM00080x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
@@ -118462,32 +118071,14 @@
- MAM00933x: 1
- lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: ""
+ - gene_reaction_rule: "ENSG00000116171"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
+ - rxnFrom: "HMRdatabase;Recon3D"
+ - eccodes: "1.5.1.10"
+ - references: "PMID:1703300"
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR03301"
- - name: ""
- - metabolites: !!omap
- - MAM02041x: 1
- - MAM02391x: -1
- - MAM02630x: -1
- - MAM03010x: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.3.6"
- - references: "PMID:8973539;PMID:10407780;PMID:11356167"
- - subsystem:
- - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)"
- - confidence_score: 0
- !!omap
- id: "MAR03302"
- name: ""
@@ -118542,24 +118133,6 @@
- subsystem:
- "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)"
- confidence_score: 0
- - !!omap
- - id: "MAR03306"
- - name: ""
- - metabolites: !!omap
- - MAM01577x: -1
- - MAM02041x: 1
- - MAM02630x: -1
- - MAM03009x: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.3.6"
- - references: "PMID:8973539;PMID:10407780;PMID:11356167"
- - subsystem:
- - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)"
- - confidence_score: 0
- !!omap
- id: "MAR03307"
- name: ""
@@ -118614,24 +118187,6 @@
- subsystem:
- "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)"
- confidence_score: 0
- - !!omap
- - id: "MAR03311"
- - name: ""
- - metabolites: !!omap
- - MAM01576x: -1
- - MAM02041x: 1
- - MAM02630x: -1
- - MAM03030x: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.3.6"
- - references: "PMID:8973539;PMID:10407780;PMID:11356167"
- - subsystem:
- - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)"
- - confidence_score: 0
- !!omap
- id: "MAR03312"
- name: ""
@@ -119037,8 +118592,8 @@
- gene_reaction_rule: "ENSG00000072778 or ENSG00000115361 or ENSG00000117054 or ENSG00000177646"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-"
- - references: "PMID:13295225;PMID:1540149"
+ - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-;1.3.99.3"
+ - references: "PMID:13295225;PMID:1540149;PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265"
- subsystem:
- "Beta oxidation of even-chain fatty acids (mitochondrial)"
- confidence_score: 0
@@ -119106,11 +118661,11 @@
- MAM02495m: -1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000072778 or ENSG00000115361 or ENSG00000117054 or ENSG00000177646"
+ - gene_reaction_rule: "ENSG00000072778 or ENSG00000087008 or ENSG00000115361 or ENSG00000117054 or ENSG00000161533 or ENSG00000177646"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-"
- - references: "PMID:13295225;PMID:1540149"
+ - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-;1.3.3.6"
+ - references: "PMID:13295225;PMID:1540149;PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265"
- subsystem:
- "Beta oxidation of even-chain fatty acids (mitochondrial)"
- confidence_score: 0
@@ -119181,8 +118736,8 @@
- gene_reaction_rule: "ENSG00000072778 or ENSG00000115361 or ENSG00000117054 or ENSG00000177646"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-"
- - references: "PMID:13295225;PMID:1540149"
+ - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-;1.3.3.6"
+ - references: "PMID:13295225;PMID:1540149;PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265"
- subsystem:
- "Beta oxidation of even-chain fatty acids (mitochondrial)"
- confidence_score: 0
@@ -119198,8 +118753,8 @@
- gene_reaction_rule: "ENSG00000084754 and ENSG00000113790 and ENSG00000127884"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "4.2.1.17"
- - references: "PMID:8012501;PMID:8188243;PMID:13295248"
+ - eccodes: "1.3.3.6;4.2.1.17"
+ - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265;PMID:8012501;PMID:8188243;PMID:13295248"
- subsystem:
- "Beta oxidation of even-chain fatty acids (mitochondrial)"
- confidence_score: 0
@@ -119250,11 +118805,11 @@
- MAM01803m: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000117054 or ENSG00000177646"
+ - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533 or ENSG00000117054 or ENSG00000177646"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.7;1.3.99.-"
- - references: "PMID:13295225;PMID:3597357"
+ - eccodes: "1.3.8.7;1.3.99.-;1.3.3.6"
+ - references: "PMID:13295225;PMID:3597357;PMID:17603022;PMID:1774065;PMID:6240978;PMID:7876265"
- subsystem:
- "Beta oxidation of even-chain fatty acids (mitochondrial)"
- confidence_score: 0
@@ -119322,11 +118877,11 @@
- MAM02644m: -1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000117054 or ENSG00000177646"
+ - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533 or ENSG00000117054 or ENSG00000177646"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.7;1.3.99.-"
- - references: "PMID:13295225;PMID:3597357"
+ - eccodes: "1.3.8.7;1.3.99.-;1.3.3.6"
+ - references: "PMID:17603022;PMID:1774065;PMID:13295225;PMID:3597357;PMID:6240978;PMID:7876265"
- subsystem:
- "Beta oxidation of even-chain fatty acids (mitochondrial)"
- confidence_score: 0
@@ -119394,11 +118949,11 @@
- MAM02122m: -1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000196177"
+ - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533 or ENSG00000196177"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- - eccodes: "1.3.8.5"
- - references: "PMID:13295225;PMID:3597357"
+ - eccodes: "1.3.8.5;1.3.3.6"
+ - references: "PMID:13295225;PMID:3597357;PMID:17603022;PMID:1774065;PMID:6240978;PMID:7876265"
- subsystem:
- "Beta oxidation of even-chain fatty acids (mitochondrial)"
- confidence_score: 0
@@ -120990,8 +120545,8 @@
- name: ""
- metabolites: !!omap
- MAM00018x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03014x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -121062,8 +120617,8 @@
- name: ""
- metabolites: !!omap
- MAM01586x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03024x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -122799,42 +122354,6 @@
- subsystem:
- "Terpenoid backbone biosynthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR01644"
- - name: "(24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA hydro-lyase [(24E)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA-forming]"
- - metabolites: !!omap
- - MAM00036m: 1
- - MAM00749m: -1
- - MAM02040m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000060971 and ENSG00000113790 and ENSG00000133835"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "4.2.1.107"
- - references: "PMID:10709654"
- - subsystem:
- - "Steroid metabolism"
- - confidence_score: 0
- - !!omap
- - id: "MAR01651"
- - name: "(24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA:NAD+ oxidoreductase"
- - metabolites: !!omap
- - MAM00036m: -1
- - MAM00748m: 1
- - MAM02039m: 1
- - MAM02552m: -1
- - MAM02553m: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000072506 and ENSG00000084754 and ENSG00000138796"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.1.1.35;1.1.1.211"
- - references: "PMID:10709654"
- - subsystem:
- - "Steroid metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR01920"
- name: "Cholesterol-sulfate sulfohydrolase"
@@ -123346,8 +122865,8 @@
- id: "MAR02003"
- name: "3alpha-hydroxy-5alpha-pregnan-20-one:NADP+ 3-oxidoreductase (A-specific)"
- metabolites: !!omap
- - MAM00759c: -1
- MAM01072c: 1
+ - MAM01314c: -1
- MAM02039c: 1
- MAM02554c: -1
- MAM02555c: 1
@@ -133927,25 +133446,6 @@
- subsystem:
- "Glycerophospholipid metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR00478"
- - name: "sn-Glycerol-3-phosphate:NADP+ 2-oxidoreductase"
- - metabolites: !!omap
- - MAM01690c: -1
- - MAM02039c: -1
- - MAM02554c: 1
- - MAM02555c: -1
- - MAM02914c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000167588"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.1.1.94"
- - references: "PMID:16460752"
- - subsystem:
- - "Glycerophospholipid metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR00479"
- name: "sn-Glycerol-3-phosphate:NAD+ 2-oxidoreductase"
@@ -133961,7 +133461,7 @@
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "1.1.1.8"
- - references: "PMID:17045662;PMID:7772607"
+ - references: "PMID:16460752;PMID:17045662;PMID:7772607"
- subsystem:
- "Glycerophospholipid metabolism"
- confidence_score: 0
@@ -133984,42 +133484,6 @@
- subsystem:
- "Glycerophospholipid metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR00483"
- - name: "sn-glycerol 3-phosphate:quinone oxidoreductase"
- - metabolites: !!omap
- - MAM01690c: 1
- - MAM02914c: -1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000115159"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.1.5.3"
- - references: "PMID:11955283;PMID:2115809;PMID:2923620;PMID:3338458;PMID:340460;PMID:8401296;PMID:8549872;PMID:8579375;PMID:9171333;PMID:9244403;PMID:9559543"
- - subsystem:
- - "Glycerophospholipid metabolism"
- - confidence_score: 0
- - !!omap
- - id: "MAR00482"
- - name: "sn-Glycerol-3-phosphate:(acceptor) 2-oxidoreductase"
- - metabolites: !!omap
- - MAM01690c: 1
- - MAM01802c: -1
- - MAM01803c: 1
- - MAM02914c: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000115159"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.1.5.3"
- - references: ""
- - subsystem:
- - "Glycerophospholipid metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR00484"
- name: "CDPglycerol phosphoglycerohydrolase"
@@ -139951,119 +139415,6 @@
- subsystem:
- "Ether lipid metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR00024"
- - name: ""
- - metabolites: !!omap
- - MAM01268n: 1
- - MAM01816n: -1
- - MAM02757n: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "(ENSG00000101849 and ENSG00000141027 and ENSG00000171720 and ENSG00000177565 and ENSG00000196498) or (ENSG00000005339 and ENSG00000124151 and ENSG00000140396) or (ENSG00000169375 and ENSG00000196498) or (ENSG00000141027 and ENSG00000169375) or (ENSG00000141027 and ENSG00000169375 and ENSG00000171720 and ENSG00000196498) or ENSG00000069667 or ENSG00000084676 or ENSG00000126368 or ENSG00000137574 or ENSG00000142453 or ENSG00000163586 or ENSG00000186350 or ENSG00000186951 or ENSG00000198646"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Isolated"
- - confidence_score: 0
- - !!omap
- - id: "MAR00025"
- - name: ""
- - metabolites: !!omap
- - MAM01268c: 1
- - MAM01268n: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000065833 or ENSG00000105398 or ENSG00000112972 or ENSG00000130304 or ENSG00000139278 or ENSG00000143344 or ENSG00000147872 or ENSG00000170485 or ENSG00000198431"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR00026"
- - name: ""
- - metabolites: !!omap
- - MAM01268c: -1
- - MAM01268r: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000079459 or ENSG00000113161 or ENSG00000140465 or ENSG00000149485 or ENSG00000167910 or ENSG00000187048 or ENSG00000241119"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR00027"
- - name: ""
- - metabolites: !!omap
- - MAM01268c: -1
- - MAM01268m: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000023330 or ENSG00000110090 or ENSG00000117054 or ENSG00000134240 or ENSG00000151726 or ENSG00000157184"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR00028"
- - name: ""
- - metabolites: !!omap
- - MAM01268c: -1
- - MAM01268x: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000161533 or ENSG00000166821"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR00029"
- - name: ""
- - metabolites: !!omap
- - MAM01268c: -1
- - MAM01268e: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000005471 or ENSG00000118137 or ENSG00000135218 or ENSG00000135744 or ENSG00000158874 or ENSG00000165029 or ENSG00000167772"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR00030"
- - name: ""
- - metabolites: !!omap
- - MAM01268c: -1
- - MAM01268n: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000004799 or ENSG00000005471 or ENSG00000072310 or ENSG00000099194 or ENSG00000100979 or ENSG00000105398 or ENSG00000110090 or ENSG00000113790 or ENSG00000117054 or ENSG00000118137 or ENSG00000130304 or ENSG00000134240 or ENSG00000134824 or ENSG00000135218 or ENSG00000138823 or ENSG00000147872 or ENSG00000149485 or ENSG00000151726 or ENSG00000156096 or ENSG00000157184 or ENSG00000158874 or ENSG00000161533 or ENSG00000163586 or ENSG00000165029 or ENSG00000166819 or ENSG00000166821 or ENSG00000167114 or ENSG00000167588 or ENSG00000167772 or ENSG00000169710 or ENSG00000175445 or ENSG00000177666 or ENSG00000185000 or ENSG00000187048 or ENSG00000278540"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR07200"
- name: ""
@@ -145376,22 +144727,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR01630"
- - name: ""
- - metabolites: !!omap
- - MAM00616c: -1
- - MAM00616m: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000180432"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.14.13.95"
- - references: "PMID:12543708"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR01631"
- name: ""
@@ -145424,40 +144759,6 @@
- subsystem:
- "Bile acid biosynthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR01635"
- - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA 25-epimerase"
- - metabolites: !!omap
- - MAM00616m: -1
- - MAM00618m: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000242110"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "5.1.99.4"
- - references: "PMID:11864182;PMID:11060344;PMID:10709654;PMID:11060344;PMID:11060344"
- - subsystem:
- - "Bile acid biosynthesis"
- - confidence_score: 0
- - !!omap
- - id: "MAR01637"
- - name: ""
- - metabolites: !!omap
- - MAM00618m: -1
- - MAM00749m: 1
- - MAM02041m: 1
- - MAM02630m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.3.6;1.17.99.-"
- - references: "PMID:10709654"
- - subsystem:
- - "Bile acid biosynthesis"
- - confidence_score: 0
- !!omap
- id: "MAR01638"
- name: ""
@@ -145474,24 +144775,6 @@
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "1.3.3.6;1.17.99.-"
- - references: ""
- - subsystem:
- - "Bile acid biosynthesis"
- - confidence_score: 0
- - !!omap
- - id: "MAR01639"
- - name: ""
- - metabolites: !!omap
- - MAM00618x: -1
- - MAM00749x: 1
- - MAM02041x: 1
- - MAM02630x: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "1.3.3.6;1.17.99.-"
- references: "PMID:11356170;PMID:8943006"
- subsystem:
- "Bile acid biosynthesis"
@@ -145509,7 +144792,7 @@
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "4.2.1.107"
- - references: "PMID:8902629"
+ - references: "PMID:8902629;PMID:10709654"
- subsystem:
- "Bile acid biosynthesis"
- confidence_score: 0
@@ -145528,7 +144811,7 @@
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "1.1.1.35;1.1.1.211"
- - references: "PMID:11330072"
+ - references: "PMID:11330072;PMID:10709654"
- subsystem:
- "Bile acid biosynthesis"
- confidence_score: 0
@@ -145550,40 +144833,6 @@
- subsystem:
- "Bile acid biosynthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR01653"
- - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA:propanoyl-CoA C-acyltransferase"
- - metabolites: !!omap
- - MAM00748m: -1
- - MAM01514m: 1
- - MAM01597m: -1
- - MAM02774m: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000060971 or ENSG00000116171 or ENSG00000167306"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "2.3.1.176;2.3.1.16"
- - references: "PMID:1121274;PMID:11356164;PMID:6378901"
- - subsystem:
- - "Bile acid biosynthesis"
- - confidence_score: 0
- - !!omap
- - id: "MAR01656"
- - name: ""
- - metabolites: !!omap
- - MAM01514c: -1
- - MAM01514x: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:10884298;PMID:6469982"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR01659"
- name: ""
@@ -145601,7 +144850,7 @@
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: ""
- - references: "PMID:18619829"
+ - references: "PMID:18619829;PMID:6469982"
- subsystem:
- "Bile acid biosynthesis"
- confidence_score: 0
@@ -145624,25 +144873,6 @@
- subsystem:
- "Bile acid biosynthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR01662"
- - name: "choloyl-CoA hydrolase"
- - metabolites: !!omap
- - MAM01445m: 1
- - MAM01514m: -1
- - MAM01597m: 1
- - MAM02039m: 1
- - MAM02040m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000101473"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "3.1.2.27"
- - references: "PMID:11454857;PMID:10944470;PMID:10817395;PMID:11673457"
- - subsystem:
- - "Bile acid biosynthesis"
- - confidence_score: 0
- !!omap
- id: "MAR01663"
- name: "choloyl-CoA hydrolase"
@@ -145678,22 +144908,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR01666"
- - name: ""
- - metabolites: !!omap
- - MAM01445c: 1
- - MAM01445m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000083807 or ENSG00000140284"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "6.2.1.7"
- - references: "PMID:12543708"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR01667"
- name: "Choloyl-CoA:glycine N-choloyltransferase"
@@ -146173,8 +145387,8 @@
- metabolites: !!omap
- MAM00617x: -1
- MAM00755x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000168306"
@@ -146194,11 +145408,11 @@
- MAM02040x: -1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000060971 and ENSG00000113790 and ENSG00000133835"
+ - gene_reaction_rule: "ENSG00000113790 or ENSG00000133835"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "4.2.1.107"
- - references: "PMID:8902629"
+ - references: "PMID:8902629;PMID:19357427"
- subsystem:
- "Bile acid biosynthesis"
- confidence_score: 0
@@ -146416,9 +145630,9 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000105398"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "2.8.2.14"
- - references: ""
+ - references: "PMID:19131563;PMID:16949895"
- subsystem:
- "Bile acid biosynthesis"
- confidence_score: 0
@@ -147968,14 +147182,14 @@
- id: "MAR01845"
- name: ""
- metabolites: !!omap
- - MAM01334x: -1
- - MAM01371x: 1
- - MAM01986x: 1
- - MAM02000x: -1
- - MAM02039x: -1
- - MAM02402x: 1
- - MAM02759x: -1
- - lower_bound: -1000
+ - MAM01334x: 1
+ - MAM01371x: -1
+ - MAM01986x: -1
+ - MAM02000x: 1
+ - MAM02039x: 1
+ - MAM02402x: -1
+ - MAM02759x: 1
+ - lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000136881"
- rxnNotes: ""
@@ -148256,7 +147470,7 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000023839 or ENSG00000103222"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:14716480;PMID:15209530;PMID:15297262"
- subsystem:
@@ -148272,7 +147486,7 @@
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:15975683"
- subsystem:
@@ -148404,7 +147618,7 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000100652 or ENSG00000125255"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:11076396;PMID:11819755;PMID:17404808;PMID:6384004"
- subsystem:
@@ -148780,7 +147994,7 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000021488 or ENSG00000084453 or ENSG00000111700"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:11076394;PMID:11076396;PMID:14579113"
- subsystem:
@@ -148800,7 +148014,7 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000021488 or ENSG00000084453 or ENSG00000111700"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:11076394;PMID:11076396;PMID:14579113"
- subsystem:
@@ -148820,7 +148034,7 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000021488 or ENSG00000084453 or ENSG00000111700"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:11076394;PMID:11076396;PMID:14579113"
- subsystem:
@@ -154510,13 +153724,13 @@
- MAM02751c: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000076555 or ENSG00000278540"
+ - gene_reaction_rule: "ENSG00000278540"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "6.3.4.14"
- references: ""
- subsystem:
- - "Biotin metabolism"
+ - "Fatty acid biosynthesis (even-chain)"
- confidence_score: 0
- !!omap
- id: "MAR07673"
@@ -154528,13 +153742,13 @@
- MAM02444c: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000076555 or ENSG00000278540"
+ - gene_reaction_rule: "ENSG00000278540"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "6.4.1.2"
- references: ""
- subsystem:
- - "Biotin metabolism"
+ - "Fatty acid biosynthesis (even-chain)"
- confidence_score: 0
- !!omap
- id: "MAR04160"
@@ -162313,9 +161527,9 @@
- MAM02039c: 1
- MAM02040c: -1
- MAM02046c: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000074410 or ENSG00000104267 or ENSG00000107159 or ENSG00000118298 or ENSG00000131686 or ENSG00000133742 or ENSG00000159593 or ENSG00000164879 or ENSG00000167434 or ENSG00000168748 or ENSG00000169239 or ENSG00000174990 or ENSG00000185015"
+ - gene_reaction_rule: "ENSG00000104267 or ENSG00000133742 or ENSG00000164879 or ENSG00000168748 or ENSG00000185015"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "4.2.1.1"
@@ -162328,8 +161542,8 @@
- name: "hydrogen-peroxide:hydrogen-peroxide oxidoreductase"
- metabolites: !!omap
- MAM02040x: 2
- - MAM02041x: -2
- - MAM02630x: 1
+ - MAM01803x: -2
+ - MAM01802x: 1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000121691 or ENSG00000166016"
@@ -162338,7 +161552,7 @@
- eccodes: "1.11.1.6"
- references: "PMID:12054464;PMID:1657986"
- subsystem:
- - "Miscellaneous"
+ - "Glyoxylate and dicarboxylate metabolism"
- confidence_score: 0
- !!omap
- id: "MAR04201"
@@ -162430,40 +161644,6 @@
- subsystem:
- "Miscellaneous"
- confidence_score: 0
- - !!omap
- - id: "MAR05406"
- - name: "carbonate hydro-lyase (carbon-dioxide-forming)"
- - metabolites: !!omap
- - MAM01421c: 1
- - MAM01596c: -1
- - MAM02040c: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000074410 or ENSG00000104267 or ENSG00000107159 or ENSG00000118298 or ENSG00000131686 or ENSG00000133742 or ENSG00000159593 or ENSG00000164879 or ENSG00000167434 or ENSG00000168748 or ENSG00000169239 or ENSG00000174990 or ENSG00000185015"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "4.2.1.1"
- - references: "PMID:10938543;PMID:11493685;PMID:12713833;PMID:12747791;PMID:14640555;PMID:17259996;PMID:17504134;PMID:17826101;PMID:7011879;PMID:7672338"
- - subsystem:
- - "Miscellaneous"
- - confidence_score: 0
- - !!omap
- - id: "MAR05409"
- - name: ""
- - metabolites: !!omap
- - MAM01421e: -1
- - MAM02039e: 1
- - MAM02046e: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Miscellaneous"
- - confidence_score: 0
- !!omap
- id: "MAR07794"
- name: "diphosphate phosphohydrolase"
@@ -162501,57 +161681,6 @@
- subsystem:
- "Miscellaneous"
- confidence_score: 0
- - !!omap
- - id: "MAR08749"
- - name: ""
- - metabolites: !!omap
- - MAM01421c: 1
- - MAM02039c: -1
- - MAM02046c: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Miscellaneous"
- - confidence_score: 0
- - !!omap
- - id: "MAR08750"
- - name: ""
- - metabolites: !!omap
- - MAM01421m: 1
- - MAM02039m: -1
- - MAM02046m: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Miscellaneous"
- - confidence_score: 0
- - !!omap
- - id: "MAR08751"
- - name: "carbonate hydro-lyase (carbon-dioxide-forming)"
- - metabolites: !!omap
- - MAM01421m: 1
- - MAM01596m: -1
- - MAM02040m: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000169239 or ENSG00000174990"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "4.2.1.1"
- - references: ""
- - subsystem:
- - "Miscellaneous"
- - confidence_score: 0
- !!omap
- id: "MAR08752"
- name: ""
@@ -163392,7 +162521,7 @@
- MAM01864c: 1
- MAM02034c: -1
- MAM02759c: 1
- - lower_bound: -1000
+ - lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000111880"
- rxnNotes: ""
@@ -163665,11 +162794,11 @@
- id: "MAR09523"
- name: "delta2-isopentenyl-diphosphate:tRNA isopentenyltransferase"
- metabolites: !!omap
- - MAM01706c: 1
- - MAM02759c: -1
- - MAM03060c: -1
- - MAM03083c: 1
- - lower_bound: -1000
+ - MAM01706c: -1
+ - MAM02759c: 1
+ - MAM03060c: 1
+ - MAM03083c: -1
+ - lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000043514"
- rxnNotes: ""
@@ -164059,12 +163188,12 @@
- id: "MAR09546"
- name: "RNA-3'-phosphate:RNA ligase (cyclizing, AMP-forming)"
- metabolites: !!omap
- - MAM01334c: -1
- - MAM01371c: 1
- - MAM02759c: -1
- - MAM02848c: 1
- - MAM02849c: -1
- - lower_bound: -1000
+ - MAM01334c: 1
+ - MAM01371c: -1
+ - MAM02759c: 1
+ - MAM02848c: -1
+ - MAM02849c: 1
+ - lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000137996"
- rxnNotes: ""
@@ -169364,9 +168493,9 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000165029"
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- - references: "PMID:16858612"
+ - references: "PMID:16858612;PMID:24653705;PMID:9831619;PMID:5555776;PMID:23104810"
- subsystem:
- "Transport reactions"
- confidence_score: 0
@@ -169672,12 +168801,12 @@
- metabolites: !!omap
- MAM02746c: 1
- MAM02746e: -1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
+ - rxnFrom: "HMRdatabase;Recon3D"
+ - eccodes: "1.14.99.1"
- references: ""
- subsystem:
- "Transport reactions"
@@ -170670,7 +169799,7 @@
- MAM02751e: -1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000112337 or ENSG00000124564 or ENSG00000124568 or ENSG00000131183 or ENSG00000146039 or ENSG00000157765"
+ - gene_reaction_rule: "ENSG00000112337 or ENSG00000124564 or ENSG00000124568 or ENSG00000131183 or ENSG00000146039 or ENSG00000157765 or ENSG00000144136 or ENSG00000168575"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: ""
@@ -171498,7 +170627,7 @@
- MAM01965e: 1
- lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000059804 or ENSG00000109667 or ENSG00000117394 or ENSG00000133460 or ENSG00000136856 or ENSG00000140675 or ENSG00000142583 or ENSG00000146411 or ENSG00000160326 or ENSG00000163581 or ENSG00000173262 or ENSG00000181856 or ENSG00000197241 or ENSG00000197496"
+ - gene_reaction_rule: "ENSG00000059804 or ENSG00000109667 or ENSG00000117394 or ENSG00000133460 or ENSG00000136856 or ENSG00000142583 or ENSG00000146411 or ENSG00000160326 or ENSG00000163581 or ENSG00000173262 or ENSG00000181856 or ENSG00000197241 or ENSG00000197496"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: ""
@@ -172236,29 +171365,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR05295"
- - name: ""
- - metabolites: !!omap
- - MAM01285c: 1
- - MAM01371c: -1
- - MAM02039c: 1
- - MAM02040c: -1
- - MAM02200c: 1
- - MAM02200e: -1
- - MAM02519c: -1
- - MAM02519e: 1
- - MAM02751c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "(ENSG00000101892 and ENSG00000137731 and ENSG00000163399) or (ENSG00000018625 and ENSG00000129244 and ENSG00000137731) or (ENSG00000018625 and ENSG00000069849 and ENSG00000137731) or (ENSG00000101892 and ENSG00000105409 and ENSG00000137731) or (ENSG00000105409 and ENSG00000137731 and ENSG00000143153) or (ENSG00000105409 and ENSG00000129244 and ENSG00000137731) or (ENSG00000069849 and ENSG00000105409 and ENSG00000137731) or (ENSG00000101892 and ENSG00000132681 and ENSG00000137731) or (ENSG00000132681 and ENSG00000137731 and ENSG00000143153) or (ENSG00000129244 and ENSG00000132681 and ENSG00000137731) or (ENSG00000069849 and ENSG00000132681 and ENSG00000137731) or (ENSG00000137731 and ENSG00000143153 and ENSG00000163399) or (ENSG00000129244 and ENSG00000137731 and ENSG00000163399) or (ENSG00000069849 and ENSG00000137731 and ENSG00000163399) or (ENSG00000018625 and ENSG00000101892 and ENSG00000137731) or (ENSG00000018625 and ENSG00000137731 and ENSG00000143153)"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: "3.6.3.9"
- - references: "PMID:2835623;PMID:6258180"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR05296"
- name: ""
@@ -172347,26 +171453,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR05310"
- - name: ""
- - metabolites: !!omap
- - MAM01975c: 1
- - MAM01975e: -1
- - MAM02039c: -1
- - MAM02039e: 1
- - MAM02519c: 2
- - MAM02519e: -2
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000017483 or ENSG00000188338"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR05311"
- name: ""
@@ -172680,24 +171766,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR05413"
- - name: ""
- - metabolites: !!omap
- - MAM02039c: 1
- - MAM02039e: -1
- - MAM02751c: 1
- - MAM02751e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000144136 or ENSG00000168575"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR05429"
- name: ""
@@ -172717,7 +171785,7 @@
- rxnNotes: "DOI:10.1002/9780470691861"
- rxnFrom: "HMRdatabase"
- eccodes: ""
- - references: ""
+ - references: "PMID:2835623;PMID:6258180"
- subsystem:
- "Transport reactions"
- confidence_score: 0
@@ -186184,66 +185252,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR06142"
- - name: ""
- - metabolites: !!omap
- - MAM00591c: -1
- - MAM00591e: 1
- - MAM01980c: 1
- - MAM01980e: -1
- - MAM02046c: 1
- - MAM02046e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000134538"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:14579113;PMID:11076396"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR06143"
- - name: ""
- - metabolites: !!omap
- - MAM00591c: -1
- - MAM00591e: 1
- - MAM02046c: 1
- - MAM02046e: -1
- - MAM02900c: 1
- - MAM02900e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000134538"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:14579113;PMID:11076396"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR06144"
- - name: ""
- - metabolites: !!omap
- - MAM00591c: -1
- - MAM00591e: 1
- - MAM02046c: 1
- - MAM02046e: -1
- - MAM02901c: 1
- - MAM02901e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000134538"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:14579113;PMID:11076396"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR06145"
- name: ""
@@ -187744,26 +186752,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR06220"
- - name: ""
- - metabolites: !!omap
- - MAM00591c: -1
- - MAM00591e: 1
- - MAM02026c: 1
- - MAM02026e: -1
- - MAM02046c: 1
- - MAM02046e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000174640"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:11076394;PMID:11076396;PMID:14579113"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR06221"
- name: ""
@@ -188346,22 +187334,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR06252"
- - name: ""
- - metabolites: !!omap
- - MAM00591c: -1
- - MAM00591e: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:12883891;PMID:12856180;PMID:11023036;PMID:1554704;PMID:18021224;PMID:4553030;PMID:793184;PMID:8725559;PMID:8781017;PMID:12739169"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR06253"
- name: ""
@@ -189218,9 +188190,9 @@
- MAM02039e: 1
- MAM02519c: 1
- MAM02519e: -1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000017483 or ENSG00000111371 or ENSG00000134294 or ENSG00000139209"
+ - gene_reaction_rule: "ENSG00000017483 or ENSG00000188338"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: ""
@@ -189329,29 +188301,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR06406"
- - name: ""
- - metabolites: !!omap
- - MAM01285c: 1
- - MAM01371c: -1
- - MAM02039c: 1
- - MAM02040c: -1
- - MAM02394c: 1
- - MAM02394e: -1
- - MAM02519c: 2
- - MAM02519e: -2
- - MAM02751c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000138074"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:16415531"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR06424"
- name: ""
@@ -195112,7 +194061,7 @@
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: ""
- - references: ""
+ - references: "PMID:9516450;PMID:10329687;PMID:15561972"
- subsystem:
- "Transport reactions"
- confidence_score: 0
@@ -199951,24 +198900,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR07758"
- - name: ""
- - metabolites: !!omap
- - MAM01514c: -1
- - MAM01514m: 1
- - MAM02039i: -1
- - MAM02039m: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000155368"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR07760"
- name: ""
@@ -202202,17 +201133,17 @@
- id: "MAR03473"
- name: ""
- metabolites: !!omap
+ - MAM01285c: -1
+ - MAM01285x: 1
- MAM01334c: 1
- MAM01334x: -1
- - MAM01371c: -1
- - MAM01371x: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000100372"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: ""
- - references: "PMID:16756494;PMID:9874197;PMID:12445829;PMID:14598172;PMID:18406340;PMID:9759482"
+ - references: "PMID:12445829;PMID:16756494;PMID:22185573"
- subsystem:
- "Transport reactions"
- confidence_score: 0
@@ -202426,22 +201357,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR04915"
- - name: ""
- - metabolites: !!omap
- - MAM01597c: -1
- - MAM01597x: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: "PMID:14598172"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR04924"
- name: ""
@@ -202768,38 +201683,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR07771"
- - name: ""
- - metabolites: !!omap
- - MAM02552c: 1
- - MAM02552x: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR07775"
- - name: ""
- - metabolites: !!omap
- - MAM02553c: -1
- - MAM02553x: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR07777"
- name: ""
@@ -202832,86 +201715,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR07782"
- - name: ""
- - metabolites: !!omap
- - MAM01285c: -1
- - MAM01285x: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR07783"
- - name: ""
- - metabolites: !!omap
- - MAM01334c: -1
- - MAM01334x: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR07785"
- - name: ""
- - metabolites: !!omap
- - MAM01371c: -1
- - MAM01371x: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR07788"
- - name: ""
- - metabolites: !!omap
- - MAM01803c: -1
- - MAM01803x: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR07790"
- - name: ""
- - metabolites: !!omap
- - MAM01802c: -1
- - MAM01802x: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR07797"
- name: ""
@@ -212161,7 +210964,7 @@
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
- - rxnFrom: "HMRdatabase"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: ""
- subsystem:
@@ -218619,35 +217422,6 @@
- subsystem:
- "Pool reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR00032"
- - name: ""
- - metabolites: !!omap
- - MAM00240c: 0.19
- - MAM00511c: 0.0014
- - MAM00560c: 0.0024
- - MAM00656c: 0.0006
- - MAM01450c: 0.005
- - MAM01451c: 0.34
- - MAM02392c: -1
- - MAM02629c: 0.0008
- - MAM02684c: 0.0092
- - MAM02685c: 0.0034
- - MAM02750c: 0.0016
- - MAM02808c: 0.0002
- - MAM02908c: 0.0004
- - MAM02958c: 0.44
- - MAM10005c: 0.005
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000072062 or ENSG00000142875 or ENSG00000165059 or ENSG00000170323 or ENSG00000172531 or ENSG00000186298 or ENSG00000213639"
- - rxnNotes: ""
- - rxnFrom: "HMRdatabase"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Pool reactions"
- - confidence_score: 0
- !!omap
- id: "MAR00021"
- name: ""
@@ -218862,7 +217636,7 @@
- MAM00005c: -1
- MAM00013c: -1
- MAM00014x: -1
- - MAM00029c: -1
+ - MAM00028c: -1
- MAM00254c: -1
- MAM00254m: -1
- MAM00254x: -1
@@ -219050,7 +217824,6 @@
- MAM00660c: -1
- MAM00660r: -1
- MAM00747r: -1
- - MAM00759c: -1
- MAM00828r: -1
- MAM00830c: -1
- MAM00925c: -1
@@ -219069,6 +217842,7 @@
- MAM01001x: -1
- MAM01011c: -1
- MAM01012c: -1
+ - MAM01314c: -1
- MAM01792r: -1
- MAM01794r: -1
- MAM02469c: -1
@@ -219099,26 +217873,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR00039"
- - name: "1, 3-Diaminopropane:Oxygen Oxidoreductase (Deaminating)"
- - metabolites: !!omap
- - MAM00248c: -1
- - MAM00760c: 1
- - MAM02040c: -1
- - MAM02041c: 1
- - MAM02579c: 1
- - MAM02630c: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000002726 or ENSG00000131471 or ENSG00000131480"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.4.3.6"
- - references: "PMID:15035803;PMID:8920635;PMID:9653080"
- - subsystem:
- - "Beta-alanine metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR00040"
- name: "3- (4-Hydroxyphenyl-)Lactate Formation"
@@ -219159,25 +217913,6 @@
- subsystem:
- "Ubiquinone synthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR00042"
- - name: "3-Hydroxyisobutyryl Coenzyme A Hydrolase, Mitochondrial"
- - metabolites: !!omap
- - MAM00784m: 1
- - MAM01597m: 1
- - MAM02039m: 1
- - MAM02040m: -1
- - MAM03226m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "3.1.2.4"
- - references: "PMID:8824301"
- - subsystem:
- - "Valine, leucine, and isoleucine metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR00043"
- name: "3-Hydroxyisobutyryl-Coenzyme A Hydrolase"
@@ -219339,7 +218074,7 @@
- MAM02553m: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000111275 or ENSG00000137124 or ENSG00000159423"
+ - gene_reaction_rule: "ENSG00000111275 or ENSG00000137124"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: "1.5.1.12"
@@ -219473,25 +218208,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR00059"
- - name: "Acyl-Coenzyme A Oxidase 2, Branched Chain"
- - metabolites: !!omap
- - MAM00037x: 1
- - MAM00755x: -1
- - MAM01802x: 1
- - MAM01803x: -1
- - MAM02630x: -0.5
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000168306"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.3.6"
- - references: "PMID:11181649"
- - subsystem:
- - "Bile acid biosynthesis"
- - confidence_score: 0
- !!omap
- id: "MAR00060"
- name: "O-Acetylcarnintine Transport into Mitochondria via Diffusion"
@@ -220142,26 +218858,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR00096"
- - name: "Beta-Ureidopropionase (D-3-Amino-Isobutanoate Forming)"
- - metabolites: !!omap
- - MAM00922c: -1
- - MAM01596c: 1
- - MAM01633c: 1
- - MAM02039c: -2
- - MAM02040c: -1
- - MAM02579c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000100024"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "3.5.1.6"
- - references: "PMID:11508704;PMID:5773299"
- - subsystem:
- - "Pyrimidine metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR00097"
- name: "Butyrate Mitochondrial Transport via Proton Symport, Reversible"
@@ -221555,8 +220251,8 @@
- MAM00558x: 1
- MAM01742x: -1
- MAM02039x: 1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000110887"
@@ -221811,42 +220507,6 @@
- subsystem:
- "N-glycan metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR00562"
- - name: "Electron Transfer Flavoprotein"
- - metabolites: !!omap
- - MAM01802m: 1
- - MAM01803m: -1
- - MAM03573m: -1
- - MAM03574m: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000105379 and ENSG00000140374"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:3170610;PMID:7601336"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- - !!omap
- - id: "MAR00563"
- - name: "Electron Transfer Flavoprotein-Ubiquinone Oxidoreductase"
- - metabolites: !!omap
- - MAM03102m: 1
- - MAM03103m: -1
- - MAM03573m: 1
- - MAM03574m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000171503"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.5.5.1"
- - references: "PMID:10444348;PMID:12049629"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- !!omap
- id: "MAR00564"
- name: "Exchange of 1 Acyl Phosphoglycerol"
@@ -222402,21 +221062,6 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR00659"
- - name: "Exchange of Phytanic Acid"
- - metabolites: !!omap
- - MAM03884e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Exchange/demand reactions"
- - confidence_score: 0
- !!omap
- id: "MAR00661"
- name: "Exchange of Phosphatidylserine (Homo Sapiens)"
@@ -222875,26 +221520,6 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- - !!omap
- - id: "MAR00740"
- - name: "Fatty-Acid- Coenzyme A Ligase"
- - metabolites: !!omap
- - MAM01334c: 1
- - MAM01371c: -1
- - MAM01597c: -1
- - MAM02747c: 1
- - MAM02759c: 1
- - MAM03884c: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000140284"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "6.2.1.3"
- - references: ""
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- !!omap
- id: "MAR00742"
- name: "Fatty-Acid- Coenzyme A Ligase (Butanoate), Mitochondrial"
@@ -223135,10 +221760,10 @@
- MAM01597x: -4
- MAM02039x: 4
- MAM02040x: -4
- - MAM02041x: 4
+ - MAM01803x: 4
- MAM02552x: -4
- MAM02553x: 4
- - MAM02630x: -4
+ - MAM01802x: -4
- MAM02644x: 1
- MAM02678x: -1
- lower_bound: 0
@@ -223255,10 +221880,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02678x: 1
- MAM02941x: -1
- lower_bound: 0
@@ -223448,10 +222073,10 @@
- MAM01934x: -1
- MAM02039x: 5
- MAM02040x: -5
- - MAM02041x: 2
+ - MAM01803x: 2
- MAM02552x: -5
- MAM02553x: 5
- - MAM02630x: -2
+ - MAM01802x: -2
- MAM02644x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -223496,10 +222121,10 @@
- MAM01597x: -5
- MAM02039x: 5
- MAM02040x: -5
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -5
- MAM02553x: 5
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02644x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -223544,10 +222169,10 @@
- MAM01773x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02941x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -223708,10 +222333,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "(ENSG00000060971 and ENSG00000133835 and ENSG00000161533) or (ENSG00000060971 and ENSG00000113790 and ENSG00000161533)"
@@ -223756,10 +222381,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "(ENSG00000060971 and ENSG00000133835 and ENSG00000161533) or (ENSG00000060971 and ENSG00000113790 and ENSG00000161533)"
@@ -223823,10 +222448,10 @@
- MAM01773x: 1
- MAM02039x: 2
- MAM02040x: -2
- - MAM02041x: 2
+ - MAM01803x: 2
- MAM02552x: -2
- MAM02553x: 2
- - MAM02630x: -2
+ - MAM01802x: -2
- MAM02971x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -223847,10 +222472,10 @@
- MAM01597x: -3
- MAM02039x: 3
- MAM02040x: -3
- - MAM02041x: 3
+ - MAM01803x: 3
- MAM02552x: -3
- MAM02553x: 3
- - MAM02630x: -3
+ - MAM01802x: -3
- MAM02647x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -223872,10 +222497,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "(ENSG00000060971 and ENSG00000133835 and ENSG00000161533) or (ENSG00000060971 and ENSG00000113790 and ENSG00000161533)"
@@ -223896,10 +222521,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "(ENSG00000060971 and ENSG00000133835 and ENSG00000161533) or (ENSG00000060971 and ENSG00000113790 and ENSG00000161533)"
@@ -223920,10 +222545,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "(ENSG00000060971 and ENSG00000133835 and ENSG00000161533) or (ENSG00000060971 and ENSG00000113790 and ENSG00000161533)"
@@ -223944,10 +222569,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "(ENSG00000060971 and ENSG00000133835 and ENSG00000161533) or (ENSG00000060971 and ENSG00000113790 and ENSG00000161533)"
@@ -223966,11 +222591,11 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02110x: -1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02971x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -224176,7 +222801,6 @@
- eccodes: "4.99.1.1"
- references: "PMID:7983009;PMID:11175906;PMID:11215517;PMID:11853551;PMID:11947230;PMID:1624416;PMID:182145;PMID:2310748;PMID:3196293;PMID:3702737;PMID:406931;PMID:6425295;PMID:7309736;PMID:8818224;PMID:9712849;PMID:9808757"
- subsystem:
- - "Heme synthesis"
- "Porphyrin metabolism"
- confidence_score: 0
- !!omap
@@ -224381,8 +223005,8 @@
- gene_reaction_rule: "ENSG00000115159"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- - eccodes: "1.1.99.5"
- - references: "PMID:11385633;PMID:8549872"
+ - eccodes: "1.1.5.3;1.1.99.5"
+ - references: "PMID:11955283;PMID:2115809;PMID:2923620;PMID:3338458;PMID:340460;PMID:8401296;PMID:8549872;PMID:8579375;PMID:9171333;PMID:9244403;PMID:9559543;PMID:11385633"
- subsystem:
- "Glycolysis / Gluconeogenesis"
- confidence_score: 0
@@ -224851,14 +223475,17 @@
- metabolites: !!omap
- MAM01285c: 1
- MAM01371c: -1
- - MAM02039e: 1
+ - MAM02039c: 1
+ - MAM02039e: -1
- MAM02040c: -1
- MAM02200c: 1
- MAM02200e: -1
+ - MAM02519c: -2
+ - MAM02519e: 2
- MAM02751c: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000105675 and ENSG00000186009"
+ - gene_reaction_rule: "ENSG00000075673 and ENSG00000186009"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: "3.6.3.10"
@@ -225014,27 +223641,6 @@
- subsystem:
- "Bile acid biosynthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR01458"
- - name: "Hydroxysteroid (17-Beta) Dehydrogenase 4"
- - metabolites: !!omap
- - MAM00748x: 1
- - MAM00749x: -1
- - MAM02039x: -1
- - MAM02040x: 1
- - MAM02554x: 1
- - MAM02555x: -1
- - MAM02630x: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000133835"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "3.10.1.1"
- - references: ""
- - subsystem:
- - "Bile acid biosynthesis"
- - confidence_score: 0
- !!omap
- id: "MAR01461"
- name: "H Transporter, Endoplasmic Reticulum"
@@ -225293,29 +223899,6 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- - !!omap
- - id: "MAR01483"
- - name: "Transport of Lipoate via Sodium Symport"
- - metabolites: !!omap
- - MAM01285c: 1
- - MAM01371c: -1
- - MAM02039c: 1
- - MAM02040c: -1
- - MAM02394c: 1
- - MAM02394e: -1
- - MAM02519c: 1
- - MAM02519e: -1
- - MAM02751c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000138074"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:10329687;PMID:10334869;PMID:12646417;PMID:15561972;PMID:9516450"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR01485"
- name: "Transport of L-Lactate via Diffusion, Mitochondrial"
@@ -225634,26 +224217,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR01515"
- - name: "Methylamine Oxidase"
- - metabolites: !!omap
- - MAM01831c: 1
- - MAM02040c: -1
- - MAM02041c: 1
- - MAM02473c: -1
- - MAM02579c: 1
- - MAM02630c: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000002726 or ENSG00000131471 or ENSG00000131480"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.4.3.6"
- - references: "PMID:11136547;PMID:14715500;PMID:9131641"
- - subsystem:
- - "Tyrosine metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR01517"
- name: "Malonyl Coenzyme A-Acp Transacylase, Mitochondrial"
@@ -225817,11 +224380,11 @@
- MAM02519e: -1
- lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: "ENSG00000100170 or ENSG00000105641 or ENSG00000198743"
+ - gene_reaction_rule: "ENSG00000144285 or ENSG00000136531 or ENSG00000153253 or ENSG00000007314 or ENSG00000183873 or ENSG00000136546 or ENSG00000196876 or ENSG00000169432 or ENSG00000185313 or ENSG00000168356 or ENSG00000164588 or ENSG00000138622 or ENSG00000186815 or ENSG00000162341 or ENSG00000102452 or (ENSG00000111319 and ENSG00000168447 and ENSG00000166828) or ENSG00000162572"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: ""
- - references: "PMID:10893432;PMID:11024018;PMID:11034615;PMID:12679487;PMID:12748858;PMID:1372904;PMID:15546855;PMID:2490366;PMID:7537337;PMID:7789985;PMID:8063771;PMID:8559252;PMID:8806637;PMID:9341168"
+ - references: "PMID:10893432;PMID:11024018;PMID:11034615;PMID:12679487;PMID:12748858;PMID:1372904;PMID:15546855;PMID:2490366;PMID:7537337;PMID:7789985;PMID:8063771;PMID:8559252;PMID:8806637;PMID:9341168;PMID:22573384;PMID:26772908"
- subsystem:
- "Transport reactions"
- confidence_score: 0
@@ -226436,10 +224999,10 @@
- MAM01597x: -3
- MAM02039x: 5
- MAM02040x: -3
- - MAM02041x: 2
+ - MAM01803x: 2
- MAM02552x: -3
- MAM02553x: 3
- - MAM02630x: -2
+ - MAM01802x: -2
- MAM02774x: 2
- MAM03554x: 1
- MAM03887x: -1
@@ -226578,22 +225141,6 @@
- subsystem:
- "Phenylalanine metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR01617"
- - name: "Fatty Acid Transport via Diffusion"
- - metabolites: !!omap
- - MAM03884c: 1
- - MAM03884e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.14.99.1"
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR01618"
- name: "Phosphatidylinositol 4-Phosphate 3-Kinase, Endoplasmic Reticulum"
@@ -226769,7 +225316,7 @@
- eccodes: "1.3.3.4"
- references: "PMID:8771201"
- subsystem:
- - "Heme synthesis"
+ - "Porphyrin metabolism"
- confidence_score: 0
- !!omap
- id: "MAR01645"
@@ -227024,8 +225571,8 @@
- MAM01597x: 1
- MAM02039x: 1
- MAM02040x: -1
+ - MAM02746x: 1
- MAM02747x: -1
- - MAM03884x: 1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000119673"
@@ -227188,22 +225735,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR01709"
- - name: "Sterol Carrier Protein 2"
- - metabolites: !!omap
- - MAM03554c: -1
- - MAM03554x: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000116171"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.5.1.10"
- - references: "PMID:1703300"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR01711"
- name: "Peroxisomal Thiolase 2"
@@ -227831,23 +226362,7 @@
- metabolites: !!omap
- MAM03142c: 1
- MAM03142m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR01823"
- - name: "Vitamin D3 Transport in Mitochondria"
- - metabolites: !!omap
- - MAM03142c: -1
- - MAM03142m: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
@@ -228393,28 +226908,6 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR02006"
- - name: "Carbon-Dioxide:Ammonia Ligase (ADP-Forming, Carbamate-Phosphorylating)"
- - metabolites: !!omap
- - MAM01285m: 2
- - MAM01371m: -2
- - MAM01420m: 1
- - MAM01596m: -1
- - MAM02039m: 3
- - MAM02040m: -1
- - MAM02579m: -1
- - MAM02751m: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000021826"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "6.3.4.16"
- - references: "PMID:15897806;PMID:175068;PMID:2893372;PMID:3886433;PMID:4347313;PMID:7248316"
- - subsystem:
- - "Urea cycle"
- - confidence_score: 0
- !!omap
- id: "MAR02021"
- name: "UDPglucose Pyrophosphohydrolase"
@@ -228472,26 +226965,6 @@
- subsystem:
- "Cholesterol metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR02027"
- - name: "L-Cysteine L-Homocysteine-Lyase (Deaminating)"
- - metabolites: !!omap
- - MAM01628c: -1
- - MAM02039c: 1
- - MAM02040c: -1
- - MAM02042c: 1
- - MAM02579c: 1
- - MAM02819c: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000116761"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "4.4.1.1"
- - references: "PMID:10212249;PMID:629532"
- - subsystem:
- - "Cysteine and methionine metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR02028"
- name: "Trans-Hexadec-2-Enoyl Coenzyme A Reductase"
@@ -228511,24 +226984,6 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- - !!omap
- - id: "MAR02035"
- - name: "Palmitoyl Coenzyme A:Oxygen 2-Oxidoreductase"
- - metabolites: !!omap
- - MAM00051m: 1
- - MAM02678m: -1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000072778 or ENSG00000087008 or ENSG00000115361 or ENSG00000117054 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.99.3"
- - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- !!omap
- id: "MAR02119"
- name: "L-Tryptophan, Tetrahydrobiopterin:Oxygen Oxidoreductase (5-Hydroxylating)"
@@ -228817,25 +227272,6 @@
- subsystem:
- "Bile acid biosynthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR02185"
- - name: " (3R)-3-Hydroxytetradecanoyl-[Acyl-Carrier-Protein]:NADP+ Oxidoreductase Fatty Acid Biosynthesis"
- - metabolites: !!omap
- - MAM00905c: 1
- - MAM02039c: 1
- - MAM02130c: -1
- - MAM02554c: -1
- - MAM02555c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000169710"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "2.3.1.85"
- - references: "PMID:11750882;PMID:4452359;PMID:6137188;PMID:7567999;PMID:7834997;PMID:8962082"
- - subsystem:
- - "Fatty acid biosynthesis"
- - confidence_score: 0
- !!omap
- id: "MAR02186"
- name: "2-Amino-4-Hydroxy-6- (Erythro-1, 2, 3-Trihydroxypropyl) Dihydropteridine Triphosphate Phosphohydrolase (Alkaline Optimum)"
@@ -229293,43 +227729,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR02276"
- - name: "ATP-Binding Cassette (ABC) Tcdb:3.A.1.208.2"
- - metabolites: !!omap
- - MAM01285c: 1
- - MAM01371c: -1
- - MAM02039c: 1
- - MAM02040c: -1
- - MAM02751c: 1
- - MAM03318c: -1
- - MAM03318e: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000023839"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:14716480;PMID:15209530;PMID:15297262"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR02277"
- - name: "Facilitated Diffusion"
- - metabolites: !!omap
- - MAM03318c: -1
- - MAM03318r: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:15975683"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR02278"
- name: "Facilitated Diffusion"
@@ -230021,7 +228420,7 @@
- MAM02751e: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: ""
+ - gene_reaction_rule: "ENSG00000143324"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: "4.2.1.1"
@@ -230067,25 +228466,6 @@
- subsystem:
- "Miscellaneous"
- confidence_score: 0
- - !!omap
- - id: "MAR02358"
- - name: "NADPH:Oxidized-Thioredoxin Oxidoreductase"
- - metabolites: !!omap
- - MAM02039m: 1
- - MAM02554m: -1
- - MAM02555m: 1
- - MAM02666m: 1
- - MAM02990m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000184470 or ENSG00000198431"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.8.1.9"
- - references: "PMID:5553404;PMID:5671058"
- - subsystem:
- - "Miscellaneous"
- - confidence_score: 0
- !!omap
- id: "MAR02360"
- name: "Active Transport"
@@ -230102,114 +228482,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR02366"
- - name: "Acyl-CoA Oxidase"
- - metabolites: !!omap
- - MAM01412m: -1
- - MAM01622m: 1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.3.6"
- - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265"
- - subsystem:
- - "Miscellaneous"
- - confidence_score: 0
- - !!omap
- - id: "MAR02367"
- - name: "Acyl-CoA Oxidase"
- - metabolites: !!omap
- - MAM00042m: 1
- - MAM02345m: -1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.3.6"
- - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- - !!omap
- - id: "MAR02369"
- - name: "Acyl-CoA Oxidase"
- - metabolites: !!omap
- - MAM00059m: 1
- - MAM02644m: -1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.3.6"
- - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- - !!omap
- - id: "MAR02370"
- - name: "Acyl-CoA Oxidase"
- - metabolites: !!omap
- - MAM00066m: 1
- - MAM02495m: -1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.3.6"
- - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- - !!omap
- - id: "MAR02372"
- - name: "Acyl-CoA Oxidase"
- - metabolites: !!omap
- - MAM00053m: 1
- - MAM02122m: -1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.3.6"
- - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- - !!omap
- - id: "MAR02373"
- - name: "Acyl-CoA Oxidase"
- - metabolites: !!omap
- - MAM00039m: 1
- - MAM01650m: -1
- - MAM03102m: 1
- - MAM03103m: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.3.6"
- - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- !!omap
- id: "MAR02375"
- name: "Long-Chain-Acyl Coenzyme A Dehydrogenase"
@@ -230300,24 +228572,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR02384"
- - name: "Glycoside-Pentoside-Hexuronide (Gph):Cation Symporter Tcdb:2.A.28.1.1"
- - metabolites: !!omap
- - MAM02519c: 2
- - MAM02519e: -2
- - MAM03318c: 1
- - MAM03318e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000100652"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:11076396;PMID:11819755;PMID:17404808;PMID:6384004"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR02385"
- name: "ATP-Binding Cassette (ABC) Tcdb:3.A.1.211.1"
@@ -230380,66 +228634,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR02390"
- - name: "Resistance-Nodulation-Cell Division (Rnd) Tcdb:2.A.60.1.14"
- - metabolites: !!omap
- - MAM01980c: -1
- - MAM01980e: 1
- - MAM02046c: -1
- - MAM02046e: 1
- - MAM03318c: 1
- - MAM03318e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000084453"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:11076394;PMID:11076396;PMID:14579113"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR02392"
- - name: "Resistance-Nodulation-Cell Division (Rnd) Tcdb:2.A.60.1.14"
- - metabolites: !!omap
- - MAM02046c: -1
- - MAM02046e: 1
- - MAM02900c: -1
- - MAM02900e: 1
- - MAM03318c: 1
- - MAM03318e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000084453"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:11076394;PMID:11076396;PMID:14579113"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR02394"
- - name: "Resistance-Nodulation-Cell Division (Rnd) Tcdb:2.A.60.1.14"
- - metabolites: !!omap
- - MAM02046c: -1
- - MAM02046e: 1
- - MAM02901c: -1
- - MAM02901e: 1
- - MAM03318c: 1
- - MAM03318e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000084453"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:11076394;PMID:11076396;PMID:14579113"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR02396"
- name: "Resistance-Nodulation-Cell Division (Rnd) Tcdb:2.A.60.1.5"
@@ -230450,11 +228644,11 @@
- MAM01980e: 1
- MAM02046c: -1
- MAM02046e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000134538"
- rxnNotes: ""
- - rxnFrom: "Recon3D"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:11076396;PMID:14579113"
- subsystem:
@@ -230470,11 +228664,11 @@
- MAM02046e: 1
- MAM02900c: -1
- MAM02900e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000134538"
- rxnNotes: ""
- - rxnFrom: "Recon3D"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:11076396;PMID:14579113"
- subsystem:
@@ -230490,11 +228684,11 @@
- MAM02046e: 1
- MAM02901c: -1
- MAM02901e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000134538"
- rxnNotes: ""
- - rxnFrom: "Recon3D"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:11076396;PMID:14579113"
- subsystem:
@@ -230514,7 +228708,7 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000174640"
- rxnNotes: ""
- - rxnFrom: "Recon3D"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:11076394;PMID:11076396;PMID:14579113"
- subsystem:
@@ -230530,7 +228724,7 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000184999"
- rxnNotes: ""
- - rxnFrom: "Recon3D"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:11023036;PMID:12739169;PMID:12856180;PMID:12883891;PMID:1554704;PMID:18021224;PMID:4553030;PMID:793184;PMID:8725559;PMID:8781017"
- subsystem:
@@ -231973,7 +230167,7 @@
- MAM01974m: 1
- MAM02040m: 1
- MAM02319m: -1
- - lower_bound: -1000
+ - lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000109576 or ENSG00000137944"
- rxnNotes: ""
@@ -232087,7 +230281,7 @@
- MAM02387m: -1
- MAM02391m: 1
- MAM02759m: 1
- - lower_bound: -1000
+ - lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000068366 or ENSG00000123983 or ENSG00000151726 or ENSG00000164398 or ENSG00000197142"
- rxnNotes: ""
@@ -232107,7 +230301,7 @@
- MAM02387x: -1
- MAM02391x: 1
- MAM02759x: 1
- - lower_bound: -1000
+ - lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000068366 or ENSG00000123983 or ENSG00000140284 or ENSG00000151726 or ENSG00000164398 or ENSG00000197142"
- rxnNotes: ""
@@ -232129,11 +230323,11 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.99.13"
+ - rxnFrom: "Recon3D;HMRdatabase"
+ - eccodes: "1.3.99.13;1.3.3.6"
- references: "PMID:10407780;PMID:11356167;PMID:8973539"
- subsystem:
- - "Fatty acid oxidation"
+ - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)"
- confidence_score: 0
- !!omap
- id: "MAR02808"
@@ -232147,11 +230341,11 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.99.13"
+ - rxnFrom: "Recon3D;HMRdatabase"
+ - eccodes: "1.3.99.13;1.3.3.6"
- references: "PMID:10407780;PMID:11356167;PMID:8973539"
- subsystem:
- - "Fatty acid oxidation"
+ - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)"
- confidence_score: 0
- !!omap
- id: "MAR02810"
@@ -232165,11 +230359,11 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.99.13"
+ - rxnFrom: "Recon3D;HMRdatabase"
+ - eccodes: "1.3.99.13;1.3.3.6"
- references: "PMID:10407780;PMID:11356167;PMID:8973539"
- subsystem:
- - "Fatty acid oxidation"
+ - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)"
- confidence_score: 0
- !!omap
- id: "MAR02818"
@@ -232185,7 +230379,7 @@
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: "1.3.99.13"
- - references: "PMID:10407780;PMID:11356167;PMID:8973539"
+ - references: "PMID:10407780;PMID:11356167;PMID:8973539;PMID:18536048;PMID:17458872"
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
@@ -232589,10 +230783,10 @@
- name: "Palmitoyl Coenzyme A Hydrolase"
- metabolites: !!omap
- MAM01434m: -1
+ - MAM01435m: 1
- MAM01597m: 1
- MAM02039m: 1
- MAM02040m: -1
- - MAM03318m: 1
- lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000097021 or ENSG00000119673"
@@ -234137,11 +232331,11 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.99.3"
+ - rxnFrom: "Recon3D;HMRdatabase"
+ - eccodes: "1.3.99.3;1.3.3.6"
- references: "PMID:1047780;PMID:11135616;PMID:8973539"
- subsystem:
- - "Fatty acid oxidation"
+ - "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)"
- confidence_score: 0
- !!omap
- id: "MAR03289"
@@ -234155,11 +232349,11 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000087008 or ENSG00000161533"
- rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.3.99.3"
+ - rxnFrom: "Recon3D;HMRdatabase"
+ - eccodes: "1.3.99.3;1.3.3.6"
- references: "PMID:1047780;PMID:11135616;PMID:8973539"
- subsystem:
- - "Fatty acid oxidation"
+ - "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)"
- confidence_score: 0
- !!omap
- id: "MAR03291"
@@ -234663,7 +232857,7 @@
- MAM02746c: -1
- MAM02759c: 1
- MAM03362c: 1
- - lower_bound: -1000
+ - lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
@@ -234703,7 +232897,7 @@
- MAM01597c: -1
- MAM02759c: 1
- MAM02766c: -1
- - lower_bound: -1000
+ - lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
@@ -235172,7 +233366,7 @@
- name: ""
- metabolites: !!omap
- MAM00119c: -1
- - MAM00902c: 1
+ - MAM00853c: 1
- MAM01596c: 1
- MAM01597c: 1
- MAM02039c: 1
@@ -235207,34 +233401,15 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- - !!omap
- - id: "MAR03441"
- - name: ""
- - metabolites: !!omap
- - MAM00681c: -1
- - MAM02039c: -1
- - MAM02554c: 1
- - MAM02555c: -1
- - MAM03354c: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:10970790"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- !!omap
- id: "MAR03442"
- name: ""
- metabolites: !!omap
+ - MAM00131r: 1
- MAM00681r: -1
- MAM02039r: -1
- MAM02554r: 1
- MAM02555r: -1
- - MAM03354r: 1
- lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000066322"
@@ -236200,23 +234375,6 @@
- subsystem:
- "Fatty acid biosynthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR03754"
- - name: "Enoyl Coenzyme A Hydratase"
- - metabolites: !!omap
- - MAM00749m: -1
- - MAM02040m: -1
- - MAM03367m: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000084754 or ENSG00000113790 or ENSG00000127884 or ENSG00000138029"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "4.2.1.17"
- - references: "PMID:10709654"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- !!omap
- id: "MAR03756"
- name: "Enoyl Coenzyme A Hydratase"
@@ -236253,34 +234411,15 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- - !!omap
- - id: "MAR03760"
- - name: "3-Hydroxyacyl Coenzyme A Dehydrogenase"
- - metabolites: !!omap
- - MAM02039m: 1
- - MAM02552m: -1
- - MAM02553m: 1
- - MAM03367m: -1
- - MAM03368m: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000072506 or ENSG00000113790 or ENSG00000133835 or ENSG00000138796"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "1.1.1.35"
- - references: "PMID:10709654"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- !!omap
- id: "MAR03764"
- name: "3-Hydroxyacyl Coenzyme A Dehydrogenase"
- metabolites: !!omap
+ - MAM00748x: 1
- MAM02039x: 1
- MAM02552x: -1
- MAM02553x: 1
- MAM03367x: -1
- - MAM03368x: 1
- lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000113790 or ENSG00000133835"
@@ -237267,7 +235406,7 @@
- id: "MAR03914"
- name: ""
- metabolites: !!omap
- - MAM03325c: -1
+ - MAM00684c: -1
- MAM03405c: 1
- MAM03510c: 1
- lower_bound: -1000
@@ -237716,8 +235855,8 @@
- id: "MAR04001"
- name: "Acyl Coenzyme A Oxidase"
- metabolites: !!omap
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03021x: 1
- MAM03352x: -1
- lower_bound: 0
@@ -238542,21 +236681,6 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR04144"
- - name: "Exchange of Chenodeoxycholate"
- - metabolites: !!omap
- - MAM03318e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Exchange/demand reactions"
- - confidence_score: 0
- !!omap
- id: "MAR04146"
- name: "Exchange of Taurolithocholate"
@@ -239622,24 +237746,6 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR04411"
- - name: "Phosphate Transport In/Out via Na+ Symporter"
- - metabolites: !!omap
- - MAM02519c: 1.5
- - MAM02519e: -1.5
- - MAM02751c: 1
- - MAM02751e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000144136 or ENSG00000168575"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:12759754"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR04413"
- name: "Generic Human Biomass Reaction"
@@ -239907,24 +238013,6 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- - !!omap
- - id: "MAR04506"
- - name: "Production of Dodecanoylcarnitine"
- - metabolites: !!omap
- - MAM01597c: 1
- - MAM02345c: -1
- - MAM02348c: -1
- - MAM03540c: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000110090 or ENSG00000169169 or ENSG00000205560"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:12828998;PMID:9498103;PMID:3955080"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- !!omap
- id: "MAR04508"
- name: "Production of Dodecenoylcarnitine"
@@ -240975,7 +239063,7 @@
- id: "MAR04886"
- name: "Exchange of Malonyl Carnitine"
- metabolites: !!omap
- - MAM03494e: -1
+ - MAM02443e: -1
- lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
@@ -241140,7 +239228,7 @@
- id: "MAR04923"
- name: "Exchange of Lauroyl Carnitine"
- metabolites: !!omap
- - MAM03540e: -1
+ - MAM01729e: -1
- lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
@@ -241256,24 +239344,6 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR04966"
- - name: "Fatty Acid Beta Oxidation (C10:1->C10:2), Peroxisomal"
- - metabolites: !!omap
- - MAM00678x: 1
- - MAM00980x: -1
- - MAM02041x: 1
- - MAM02630x: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000161533"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:18536048;PMID:17458872"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- !!omap
- id: "MAR04967"
- name: "Fatty Acid Beta Oxidation (C10:1->C8), Mitochondrial"
@@ -241378,8 +239448,8 @@
- id: "MAR04981"
- name: "Fatty Acid Beta Oxidation (C10:2->C10:3), Peroxisomal"
- metabolites: !!omap
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03542x: -1
- MAM03545x: 1
- lower_bound: 0
@@ -241558,10 +239628,10 @@
- MAM01650x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02644x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -241581,10 +239651,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03922x: 1
- MAM03924x: -1
- lower_bound: 0
@@ -241604,10 +239674,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02774x: 1
- MAM03554x: 1
- MAM04004x: -1
@@ -241854,11 +239924,11 @@
- MAM01650x: 1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02345x: -1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000060971 and ENSG00000113790 and ENSG00000133835 and ENSG00000161533"
@@ -241896,10 +239966,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03491x: -1
- MAM03924x: 1
- lower_bound: 0
@@ -241973,10 +240043,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM04004x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -242046,10 +240116,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000060971 and ENSG00000113790 and ENSG00000133835 and ENSG00000161533"
@@ -242111,10 +240181,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03203x: 1
- MAM03978x: -1
- lower_bound: 0
@@ -242178,10 +240248,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03211x: 1
- MAM03288x: -1
- lower_bound: 0
@@ -242226,12 +240296,12 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02345x: 1
- MAM02495x: -1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000060971 and ENSG00000113790 and ENSG00000133835 and ENSG00000161533"
@@ -242269,10 +240339,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03491x: 1
- MAM03492x: -1
- lower_bound: 0
@@ -242313,10 +240383,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02774x: 1
- MAM03887x: -1
- lower_bound: 0
@@ -242429,10 +240499,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000060971 and ENSG00000113790 and ENSG00000133835 and ENSG00000161533"
@@ -242573,8 +240643,8 @@
- id: "MAR05196"
- name: "Fatty Acid Beta Oxidation (C16:3->C16:4), Peroxisomal"
- metabolites: !!omap
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03274x: -1
- MAM03653x: 1
- lower_bound: 0
@@ -242726,8 +240796,8 @@
- id: "MAR05300"
- name: "Fatty Acid Beta Oxidation (C16:4->C16:5), Peroxisomal"
- metabolites: !!omap
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03273x: -1
- MAM03656x: 1
- lower_bound: 0
@@ -242829,26 +240899,6 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- - !!omap
- - id: "MAR05323"
- - name: "Fatty Acid Activation (C16Br), Peroxisomal"
- - metabolites: !!omap
- - MAM01334x: 1
- - MAM01371x: -1
- - MAM01597x: -1
- - MAM02747x: 1
- - MAM02759x: 1
- - MAM03884x: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000140284"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:11591435"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- !!omap
- id: "MAR05325"
- name: "Fatty Acid Beta Oxidation (C16->C14), Mitochondrial"
@@ -242881,11 +240931,11 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02495x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02678x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -242924,10 +240974,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03492x: 1
- MAM03655x: -1
- lower_bound: 0
@@ -243038,10 +241088,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03789x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -243240,10 +241290,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03273x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -243352,10 +241402,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03567x: -1
- MAM03789x: 1
- lower_bound: 0
@@ -243396,8 +241446,8 @@
- id: "MAR05374"
- name: "Fatty Acid Beta Oxidation (C20:4->C20:5), Peroxisomal"
- metabolites: !!omap
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03570x: 1
- MAM03571x: -1
- lower_bound: 0
@@ -243464,10 +241514,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03555x: -1
- MAM03567x: 1
- lower_bound: 0
@@ -243547,8 +241597,8 @@
- name: "Fatty Acid Beta Oxidation (C22:5->C22:6), Peroxisomal"
- metabolites: !!omap
- MAM00093x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03557x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -243715,10 +241765,10 @@
- MAM01773x: 1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000060971 and ENSG00000113790 and ENSG00000133835 and ENSG00000161533"
@@ -243779,10 +241829,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03555x: 1
- lower_bound: 0
- upper_bound: 1000
@@ -243803,10 +241853,10 @@
- MAM01725x: 1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02971x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -243818,24 +241868,6 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- - !!omap
- - id: "MAR05434"
- - name: "Malonylcoa->Malonylcarnitine"
- - metabolites: !!omap
- - MAM01597c: 1
- - MAM02348c: -1
- - MAM02444c: -1
- - MAM03494c: 1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000110090 or ENSG00000169169 or ENSG00000205560"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:12651823;PMID:18192268"
- - subsystem:
- - "Fatty acid oxidation"
- - confidence_score: 0
- !!omap
- id: "MAR05449"
- name: "Fatty Acid Beta Oxidation (C4->C2), Mitochondrial"
@@ -243929,7 +241961,7 @@
- MAM03242m: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: ""
+ - gene_reaction_rule: "ENSG00000148090"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: ""
@@ -244064,11 +242096,11 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02122x: -1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000060971 and ENSG00000113790 and ENSG00000133835 and ENSG00000161533"
@@ -244087,10 +242119,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02944x: 1
- MAM03409x: -1
- lower_bound: 0
@@ -244159,10 +242191,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03659x: 1
- MAM03794x: -1
- lower_bound: 0
@@ -244207,11 +242239,11 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02122x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM02644x: -1
- lower_bound: 0
- upper_bound: 1000
@@ -244231,10 +242263,10 @@
- MAM01597x: -1
- MAM02039x: 1
- MAM02040x: -1
- - MAM02041x: 1
+ - MAM01803x: 1
- MAM02552x: -1
- MAM02553x: 1
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03409x: 1
- MAM03922x: -1
- lower_bound: 0
@@ -245647,52 +243679,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR06894"
- - name: "Transport of D-Galactose from Extracellular Space to Cytosol of Mucosal Cells in Small Intestine"
- - metabolites: !!omap
- - MAM01285c: 1
- - MAM01371c: -1
- - MAM01910c: 1
- - MAM01910e: -1
- - MAM02039c: 1
- - MAM02040c: -1
- - MAM02519c: 2
- - MAM02519e: -2
- - MAM02751c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000100170"
- - rxnNotes: "https://books.google.se/books/about/Advanced_Nutrition_and_Human_Metabolism.html?id=6CBrPX8oIX8C Sareen S. Gropper, Jack L. Smith, James L. Groff (2009) Advanced nutrition and human metabolism, Wadsworth cengage learning, 5th edition, page 71-72"
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:20522896;PMID:14642859"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR06895"
- - name: "Transport of D-Glucose from Extracellular Space to Cytosol of Mucosal Cells in Small Intestine"
- - metabolites: !!omap
- - MAM01285c: 1
- - MAM01371c: -1
- - MAM01965c: 1
- - MAM01965e: -1
- - MAM02039c: 1
- - MAM02040c: -1
- - MAM02519c: 2
- - MAM02519e: -2
- - MAM02751c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000100170"
- - rxnNotes: "https://books.google.se/books/about/Advanced_Nutrition_and_Human_Metabolism.html?id=6CBrPX8oIX8C Sareen S. Gropper, Jack L. Smith, James L. Groff (2009) Advanced nutrition and human metabolism, Wadsworth cengage learning, 5th edition, page 71-72"
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:20522896;PMID:14642859"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR06896"
- name: "Transport of L-Glutamine by Atb0 Transporter"
@@ -249671,26 +247657,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR09887"
- - name: "Glutamine Transport by B0At3"
- - metabolites: !!omap
- - MAM01442c: 1
- - MAM01442e: -1
- - MAM01975c: 1
- - MAM01975e: -1
- - MAM02519c: 1
- - MAM02519e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000147003 and ENSG00000164363"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR09888"
- name: "Glutamate Transport by B0At3"
@@ -251511,11 +249477,11 @@
- MAM02039e: 2
- lower_bound: -1000
- upper_bound: 1000
- - gene_reaction_rule: ""
+ - gene_reaction_rule: "ENSG00000088386"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: "3.1.1.4"
- - references: "PMID:11752223"
+ - references: "PMID:19789362"
- subsystem:
- "Transport reactions"
- confidence_score: 0
@@ -252738,27 +250704,6 @@
- subsystem:
- "Transport reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR10164"
- - name: "Transport of (8Z, 11Z, 14Z)-Eicosatrienoic Acid, Active Transport"
- - metabolites: !!omap
- - MAM01285c: 1
- - MAM01371c: -1
- - MAM02039c: 1
- - MAM02040c: -1
- - MAM02751c: 1
- - MAM03332c: -1
- - MAM03332e: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:24653705;PMID:9831619;PMID:5555776;PMID:23104810"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR10165"
- name: "Transport of 15-Hydroxy- (8Z, 11Z, 13E)-Eicosatrienoate, Active Transport"
@@ -256992,21 +254937,6 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR10433"
- - name: "Exchangefor (8Z, 11Z, 14Z)-Eicosatrienoic Acid"
- - metabolites: !!omap
- - MAM03332e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Exchange/demand reactions"
- - confidence_score: 0
- !!omap
- id: "MAR10434"
- name: "Exchange of Laurate"
@@ -257216,36 +255146,17 @@
- subsystem:
- "Bile acid biosynthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR10447"
- - name: "Formation of Sulfochenodeoxycholate"
- - metabolites: !!omap
- - MAM02039c: 1
- - MAM02681c: 1
- - MAM02682c: -1
- - MAM02950c: 1
- - MAM03318c: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000105398"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:19131563;PMID:16949895"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR10448"
- name: "Formation of 7-Ketolithocholate"
- metabolites: !!omap
+ - MAM01435c: -1
- MAM02039c: -1
- MAM02040c: 2
- MAM02554c: 1
- MAM02555c: -1
- MAM02630c: -1
- MAM03313c: 1
- - MAM03318c: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: ""
@@ -257581,23 +255492,7 @@
- metabolites: !!omap
- MAM03837c: -1
- MAM03837e: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:21343587"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR10467"
- - name: "Uptake of P-Cresol Sulfate"
- - metabolites: !!omap
- - MAM03837c: 1
- - MAM03837e: -1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
@@ -257613,29 +255508,13 @@
- metabolites: !!omap
- MAM03215c: 1
- MAM03215e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:12904817"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR10469"
- - name: "3-Hydroxycinanmic Acid Secretion"
- - metabolites: !!omap
- - MAM03215c: -1
- - MAM03215e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: ""
- - references: "PMID:12904817"
+ - references: "PMID:12904817;PMID:12663291"
- subsystem:
- "Transport reactions"
- confidence_score: 0
@@ -257643,25 +255522,9 @@
- id: "MAR10470"
- name: "3-Hydroxyphenylpropionic Acid Uptake"
- metabolites: !!omap
- - MAM03231c: 1
- MAM03231e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:12904817;PMID:12663291"
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- - !!omap
- - id: "MAR10471"
- - name: "3-Hydroxyphenylpropionic Acid Secretion"
- - metabolites: !!omap
- - MAM03231c: -1
- - MAM03231e: 1
- - lower_bound: 0
+ - MAM03232c: 1
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
@@ -271111,8 +268974,8 @@
- id: "MAR11256"
- name: "Transport of Malonyl Carnitine"
- metabolites: !!omap
- - MAM03494c: 1
- - MAM03494e: -1
+ - MAM02443c: 1
+ - MAM02443e: -1
- lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
@@ -271271,8 +269134,8 @@
- id: "MAR11266"
- name: "Transport of Lauroyl Carnitine"
- metabolites: !!omap
- - MAM03540c: 1
- - MAM03540e: -1
+ - MAM01729c: 1
+ - MAM01729e: -1
- lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
@@ -271907,11 +269770,11 @@
- MAM02039e: -1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: ""
+ - gene_reaction_rule: "ENSG00000088386 or ENSG00000123643"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: ""
- - references: "PMID:21749716"
+ - references: "PMID:19789362"
- subsystem:
- "Transport reactions"
- confidence_score: 0
@@ -272060,7 +269923,7 @@
- eccodes: ""
- references: "PMID:21749716"
- subsystem:
- - "Heme synthesis"
+ - "Porphyrin metabolism"
- confidence_score: 0
- !!omap
- id: "MAR11317"
@@ -273542,7 +271405,7 @@
- eccodes: ""
- references: "PMID:21749716"
- subsystem:
- - "Heme synthesis"
+ - "Porphyrin metabolism"
- confidence_score: 0
- !!omap
- id: "MAR11407"
@@ -273794,23 +271657,6 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR11421"
- - name: "Citrate Lyase"
- - metabolites: !!omap
- - MAM01252c: 1
- - MAM01587c: -1
- - MAM02633c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000125246"
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: "4.1.3.6"
- - references: "PMID:11741334"
- - subsystem:
- - "Tricarboxylic acid cycle and glyoxylate/dicarboxylate metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR11422"
- name: "Exchange of Galactitol"
@@ -273943,11 +271789,11 @@
- MAM02819c: 1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: ""
+ - gene_reaction_rule: "ENSG00000180185"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: ""
- - references: ""
+ - references: "PMID:25575590"
- subsystem:
- "Miscellaneous"
- confidence_score: 0
@@ -275332,7 +273178,7 @@
- MAM03964m: -1
- lower_bound: 0
- upper_bound: 1000
- - gene_reaction_rule: ""
+ - gene_reaction_rule: "ENSG00000148090"
- rxnNotes: "https://www.springer.com/gp/book/9789400957800"
- rxnFrom: "Recon3D"
- eccodes: ""
@@ -275579,8 +273425,8 @@
- name: "Formation of 3-Hydroxy-Adipoyl Coa"
- metabolites: !!omap
- MAM02040x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03213x: 1
- MAM03409x: -1
- lower_bound: 0
@@ -275664,8 +273510,8 @@
- name: "Formation of 3-Hydroxy-Sebacoyl Coa"
- metabolites: !!omap
- MAM02040x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03259x: 1
- MAM03924x: -1
- lower_bound: 0
@@ -275749,8 +273595,8 @@
- name: "Formation of 3-Hydoxy-Suberyl Coa"
- metabolites: !!omap
- MAM02040x: -1
- - MAM02041x: 1
- - MAM02630x: -1
+ - MAM01803x: 1
+ - MAM01802x: -1
- MAM03261x: 1
- MAM03922x: -1
- lower_bound: 0
@@ -276516,13 +274362,13 @@
- metabolites: !!omap
- MAM02750c: -1
- MAM02750e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
- rxnFrom: "Recon3D"
- - eccodes: ""
- - references: "PMID:8145081"
+ - eccodes: "3.6.3.44;3.6.3.1"
+ - references: "PMID:8145081;PMID:10856719"
- subsystem:
- "Transport reactions"
- confidence_score: 0
@@ -276532,13 +274378,13 @@
- metabolites: !!omap
- MAM03803c: -1
- MAM03803e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: ""
- - references: "PMID:8145081"
+ - references: "PMID:8145081;PMID:10856719"
- subsystem:
- "Transport reactions"
- confidence_score: 0
@@ -276548,13 +274394,13 @@
- metabolites: !!omap
- MAM03802c: -1
- MAM03802e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: ""
- - references: "PMID:8145081"
+ - references: "PMID:8145081;PMID:10856719"
- subsystem:
- "Transport reactions"
- confidence_score: 0
@@ -276564,13 +274410,13 @@
- metabolites: !!omap
- MAM03804c: -1
- MAM03804e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
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@@ -277478,13 +275324,13 @@
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- metabolites: !!omap
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@@ -283516,29 +281026,13 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR11988"
- - name: "Transport of Apo B, Extracellular"
- - metabolites: !!omap
- - MAM01351c: 1
- - MAM01351e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR11989"
- name: "Transport of Apo C1, Extracellular"
- metabolites: !!omap
- MAM01353c: -1
- MAM01353e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
@@ -283563,29 +281057,13 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR11991"
- - name: "Transport of Apo C1, Extracellular"
- - metabolites: !!omap
- - MAM01353c: 1
- - MAM01353e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR11992"
- name: "Transport of Apo C2, Extracellular"
- metabolites: !!omap
- MAM01354c: -1
- MAM01354e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
@@ -283610,29 +281088,13 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR11994"
- - name: "Transport of Apo C2, Extracellular"
- - metabolites: !!omap
- - MAM01354c: 1
- - MAM01354e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR11995"
- name: "Transport of Apo C3, Extracellular"
- metabolites: !!omap
- MAM01355c: -1
- MAM01355e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
@@ -283657,29 +281119,13 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR11997"
- - name: "Transport of Apo C3, Extracellular"
- - metabolites: !!omap
- - MAM01355c: 1
- - MAM01355e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR11998"
- name: "Transport of Apo E, Extracellular"
- metabolites: !!omap
- MAM01359c: -1
- MAM01359e: 1
- - lower_bound: 0
+ - lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
@@ -283704,22 +281150,6 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR12000"
- - name: "Transport of Apo E, Extracellular"
- - metabolites: !!omap
- - MAM01359c: 1
- - MAM01359e: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Transport reactions"
- - confidence_score: 0
- !!omap
- id: "MAR12001"
- name: "Dopamine 4-O-Sulfotransferase"
@@ -283929,7 +281359,7 @@
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
- - rxnFrom: "Recon3D"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: ""
- references: "PMID:23683503"
- subsystem:
@@ -284144,7 +281574,7 @@
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000077498"
- rxnNotes: ""
- - rxnFrom: "Recon3D"
+ - rxnFrom: "HMRdatabase;Recon3D"
- eccodes: "1.14.18.1"
- references: "PMID:24548101"
- subsystem:
@@ -286219,13 +283649,13 @@
- id: "MAR12146"
- name: "3-dehydro-chenodehydroxycholic acid formation"
- metabolites: !!omap
+ - MAM01435c: -1
- MAM02039c: -1
- MAM02040c: 2
- MAM02554c: 1
- MAM02555c: -1
- MAM02630c: -1
- MAM03206c: 1
- - MAM03318c: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000160868"
@@ -286755,9 +284185,9 @@
- id: "MAR12174"
- name: "UDP-Glucuronosyltransferase (UGT) cytosolic (chenodeoxycholic acid)"
- metabolites: !!omap
+ - MAM01435c: -1
- MAM03106c: 1
- MAM03109c: -1
- - MAM03318c: -1
- MAM03508c: 1
- lower_bound: 0
- upper_bound: 1000
@@ -286773,9 +284203,9 @@
- id: "MAR12175"
- name: "UDP-Glucuronosyltransferase (UGT) (chenodeoxycholic acid)"
- metabolites: !!omap
+ - MAM01435r: -1
- MAM03106r: 1
- MAM03109r: -1
- - MAM03318r: -1
- MAM03508r: 1
- lower_bound: 0
- upper_bound: 1000
@@ -286828,9 +284258,9 @@
- id: "MAR12178"
- name: "UDP-Glucuronosyltransferase (UGT) cytosolic (chenodeoxycholic acid)"
- metabolites: !!omap
+ - MAM01435c: -1
- MAM03106c: 1
- MAM03109c: -1
- - MAM03318c: -1
- MAM03509c: 1
- lower_bound: 0
- upper_bound: 1000
@@ -286846,9 +284276,9 @@
- id: "MAR12179"
- name: "UDP-Glucuronosyltransferase (UGT) ER (chenodeoxycholic acid)"
- metabolites: !!omap
+ - MAM01435r: -1
- MAM03106r: 1
- MAM03109r: -1
- - MAM03318r: -1
- MAM03509r: 1
- lower_bound: 0
- upper_bound: 1000
@@ -286919,12 +284349,12 @@
- id: "MAR12183"
- name: "Chenodeoxycholic acid 6alpha-hydroxylase"
- metabolites: !!omap
+ - MAM01435c: -1
- MAM02039c: -1
- MAM02040c: 1
- MAM02554c: 1
- MAM02555c: -1
- MAM02630c: -1
- - MAM03318c: -1
- MAM03685c: 1
- lower_bound: 0
- upper_bound: 1000
@@ -290331,10 +287761,10 @@
- MAM01597x: -2
- MAM02039x: 2
- MAM02040x: -2
- - MAM02041x: 2
+ - MAM01803x: 2
- MAM02552x: -2
- MAM02553x: 2
- - MAM02630x: -1
+ - MAM01802x: -1
- MAM03236x: -1
- MAM03238x: 1
- lower_bound: 0
@@ -298012,12 +295442,12 @@
- MAM01597x: -4
- MAM02039x: 3
- MAM02040x: -2
- - MAM02041x: 2
+ - MAM01803x: 2
- MAM02552x: -4
- MAM02553x: 4
- MAM02554x: 1
- MAM02555x: -1
- - MAM02630x: -2
+ - MAM01802x: -2
- MAM03580x: -1
- MAM03893x: 1
- lower_bound: 0
@@ -302284,21 +299714,6 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR13064"
- - name: "EX_M01268[e]"
- - metabolites: !!omap
- - MAM01268e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Exchange/demand reactions"
- - confidence_score: 0
- !!omap
- id: "MAR13065"
- name: "EX_HC02080[e]"
@@ -302314,21 +299729,6 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR13066"
- - name: "EX_h2co3[e]"
- - metabolites: !!omap
- - MAM01421e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: "Recon3D"
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Exchange/demand reactions"
- - confidence_score: 0
- !!omap
- id: "MAR13067"
- name: "EX_M02837[e]"
@@ -302618,21 +300018,6 @@
- subsystem:
- "Exchange/demand reactions"
- confidence_score: 0
- - !!omap
- - id: "MAR10025"
- - name: "Exchange of 20-hydroxy-arachidonate"
- - metabolites: !!omap
- - MAM00591e: -1
- - lower_bound: -1000
- - upper_bound: 1000
- - gene_reaction_rule: ""
- - rxnNotes: ""
- - rxnFrom: ""
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Exchange/demand reactions"
- - confidence_score: 0
- !!omap
- id: "MAR10026"
- name: "Exchange of chenodiol"
@@ -302642,7 +300027,7 @@
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
- - rxnFrom: ""
+ - rxnFrom: "Recon3D"
- eccodes: ""
- references: ""
- subsystem:
@@ -305116,25 +302501,6 @@
- subsystem:
- "Retinol metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR20002"
- - name: "MAR20002"
- - metabolites: !!omap
- - MAM02039c: 1
- - MAM02552c: -1
- - MAM02553c: 1
- - MAM02832c: 1
- - MAM02834c: -1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000198099 or ENSG00000196616"
- - rxnNotes: ""
- - rxnFrom: ""
- - eccodes: "1.1.1.105"
- - references: ""
- - subsystem:
- - "Retinol metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR20003"
- name: "MAR20003"
@@ -305328,46 +302694,6 @@
- subsystem:
- "Isolated"
- confidence_score: 0
- - !!omap
- - id: "MAR20014"
- - name: "MAR20014"
- - metabolites: !!omap
- - MAM01034c: -1
- - MAM01922c: 1
- - MAM02039c: 2
- - MAM02040c: -1
- - MAM02552c: -1
- - MAM02553c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000143149"
- - rxnNotes: ""
- - rxnFrom: ""
- - eccodes: "1.2.1.47"
- - references: ""
- - subsystem:
- - "Lysine degradation"
- - confidence_score: 0
- - !!omap
- - id: "MAR20015"
- - name: "MAR20015"
- - metabolites: !!omap
- - MAM00969c: -1
- - MAM00970c: 1
- - MAM02039c: 2
- - MAM02040c: -1
- - MAM02552c: -1
- - MAM02553c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000143149"
- - rxnNotes: ""
- - rxnFrom: ""
- - eccodes: "1.2.1.19"
- - references: ""
- - subsystem:
- - "Arginine and proline metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR20016"
- name: "MAR20016"
@@ -305446,24 +302772,6 @@
- subsystem:
- " Arachidonic acid metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR20020"
- - name: "MAR20020"
- - metabolites: !!omap
- - MAM01965r: 1
- - MAM01968r: -1
- - MAM02040r: -1
- - MAM02751r: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000131482 or ENSG00000141349"
- - rxnNotes: ""
- - rxnFrom: ""
- - eccodes: "3.1.3.9; 3.1.3.58"
- - references: ""
- - subsystem:
- - "Starch and sucrose metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR20021"
- name: "MAR20021"
@@ -306059,26 +303367,6 @@
- subsystem:
- "Fatty acid metabolism"
- confidence_score: 0
- - !!omap
- - id: "MAR20052"
- - name: "MAR20052"
- - metabolites: !!omap
- - MAM00564c: -1
- - MAM02039c: 2
- - MAM02040c: -1
- - MAM02552c: -1
- - MAM02553c: 1
- - MAM02766c: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000072210"
- - rxnNotes: ""
- - rxnFrom: ""
- - eccodes: ""
- - references: ""
- - subsystem:
- - "Fatty acid metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR20053"
- name: "MAR20053"
@@ -306339,23 +303627,6 @@
- subsystem:
- "Insect hormone biosynthesis"
- confidence_score: 0
- - !!omap
- - id: "MAR20066"
- - name: "MAR20066"
- - metabolites: !!omap
- - MAM02040x: 2
- - MAM02041x: -2
- - MAM02630x: 1
- - lower_bound: 0
- - upper_bound: 1000
- - gene_reaction_rule: "ENSG00000121691"
- - rxnNotes: ""
- - rxnFrom: ""
- - eccodes: "1.11.1.6; 1.11.1.21"
- - references: ""
- - subsystem:
- - "Glyoxylate and dicarboxylate metabolism"
- - confidence_score: 0
- !!omap
- id: "MAR20067"
- name: "MAR20067"
@@ -306464,6 +303735,1072 @@
- subsystem:
- "Alanine, aspartate and glutamate metabolism"
- confidence_score: 0
+ - !!omap
+ - id: "MAR20073"
+ - name: "MAR20073"
+ - metabolites: !!omap
+ - MAM01362r: 1
+ - MAM02040r: -1
+ - MAM02927r: 1
+ - MAM20071r: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20074"
+ - name: "MAR20074"
+ - metabolites: !!omap
+ - MAM01362g: 1
+ - MAM02040g: -1
+ - MAM02927g: 1
+ - MAM20071g: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20075"
+ - name: "MAR20075"
+ - metabolites: !!omap
+ - MAM01362r: 1
+ - MAM02040r: -1
+ - MAM02749r: 1
+ - MAM20070r: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20076"
+ - name: "MAR20076"
+ - metabolites: !!omap
+ - MAM01362g: 1
+ - MAM02040g: -1
+ - MAM02749g: 1
+ - MAM20070g: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20077"
+ - name: "MAR20077"
+ - metabolites: !!omap
+ - MAM01584r: 1
+ - MAM02040r: -1
+ - MAM02929r: 1
+ - MAM20068r: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20078"
+ - name: "MAR20078"
+ - metabolites: !!omap
+ - MAM01584g: 1
+ - MAM02040g: -1
+ - MAM02929g: 1
+ - MAM20068g: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20079"
+ - name: "MAR20079"
+ - metabolites: !!omap
+ - MAM01584r: 1
+ - MAM02040r: -1
+ - MAM02927r: 1
+ - MAM20069r: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20080"
+ - name: "MAR20080"
+ - metabolites: !!omap
+ - MAM01584g: 1
+ - MAM02040g: -1
+ - MAM02927g: 1
+ - MAM20069g: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20081"
+ - name: "MAR20081"
+ - metabolites: !!omap
+ - MAM01584r: 1
+ - MAM02040r: -1
+ - MAM02749r: 1
+ - MAM20067r: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20082"
+ - name: "MAR20082"
+ - metabolites: !!omap
+ - MAM01584g: 1
+ - MAM02040g: -1
+ - MAM02749g: 1
+ - MAM20067g: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20083"
+ - name: "MAR20083"
+ - metabolites: !!omap
+ - MAM02040r: -1
+ - MAM02646r: 1
+ - MAM02929r: 1
+ - MAM20073r: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20084"
+ - name: "MAR20084"
+ - metabolites: !!omap
+ - MAM01778g: 1
+ - MAM02040g: -1
+ - MAM02929g: 1
+ - MAM20073g: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20085"
+ - name: "MAR20085"
+ - metabolites: !!omap
+ - MAM02040r: -1
+ - MAM02646r: 1
+ - MAM02927r: 1
+ - MAM20074r: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20086"
+ - name: "MAR20086"
+ - metabolites: !!omap
+ - MAM01778g: 1
+ - MAM02040g: -1
+ - MAM02927g: 1
+ - MAM20074g: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20087"
+ - name: "MAR20087"
+ - metabolites: !!omap
+ - MAM02040r: -1
+ - MAM02646r: 1
+ - MAM02749r: 1
+ - MAM20072r: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20088"
+ - name: "MAR20088"
+ - metabolites: !!omap
+ - MAM01778g: 1
+ - MAM02040g: -1
+ - MAM02749g: 1
+ - MAM20072g: -1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000078124"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: ""
+ - references: ""
+ - subsystem:
+ - "Fatty acid metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20089"
+ - name: "MAR20089"
+ - metabolites: !!omap
+ - MAM01107c: -1
+ - MAM01596c: 1
+ - MAM02039c: -1
+ - MAM02897c: 1
+ - lower_bound: 0
+ - upper_bound: 1000
+ - gene_reaction_rule: "ENSG00000132437"
+ - rxnNotes: ""
+ - rxnFrom: ""
+ - eccodes: "4.1.1.28"
+ - references: ""
+ - subsystem:
+ - "Tryptophan metabolism"
+ - confidence_score: 0
+ - !!omap
+ - id: "MAR20090"
+ - name: "MAR20090"
+ - metabolites: !!omap
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@@ -306591,6 +304928,9 @@
- !!omap
- id: "ENSG00000007216"
- name: "SLC13A2"
+ - !!omap
+ - id: "ENSG00000007314"
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- name: "TKTL1"
@@ -307119,9 +305459,6 @@
- !!omap
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- - id: "ENSG00000069667"
- - name: "RORA"
- !!omap
- id: "ENSG00000069764"
- name: "PLA2G10"
@@ -307191,18 +305528,12 @@
- !!omap
- id: "ENSG00000072042"
- name: "RDH11"
- - !!omap
- - id: "ENSG00000072062"
- - name: "PRKACA"
- !!omap
- id: "ENSG00000072210"
- name: "ALDH3A2"
- !!omap
- id: "ENSG00000072274"
- name: "TFRC"
- - !!omap
- - id: "ENSG00000072310"
- - name: "SREBF1"
- !!omap
- id: "ENSG00000072401"
- name: "UBE2D1"
@@ -307908,9 +306239,6 @@
- !!omap
- id: "ENSG00000100938"
- name: "GMPR2"
- - !!omap
- - id: "ENSG00000100979"
- - name: "PLTP"
- !!omap
- id: "ENSG00000100983"
- name: "GSS"
@@ -307989,9 +306317,6 @@
- !!omap
- id: "ENSG00000101846"
- name: "STS"
- - !!omap
- - id: "ENSG00000101849"
- - name: "TBL1X"
- !!omap
- id: "ENSG00000101868"
- name: "POLA1"
@@ -308061,6 +306386,9 @@
- !!omap
- id: "ENSG00000102393"
- name: "GLA"
+ - !!omap
+ - id: "ENSG00000102452"
+ - name: "NALCN"
- !!omap
- id: "ENSG00000102575"
- name: "ACP5"
@@ -308700,6 +307028,9 @@
- !!omap
- id: "ENSG00000111275"
- name: "ALDH2"
+ - !!omap
+ - id: "ENSG00000111319"
+ - name: "SCNN1A"
- !!omap
- id: "ENSG00000111339"
- name: "ART4"
@@ -309252,9 +307583,6 @@
- !!omap
- id: "ENSG00000118094"
- name: "TREH"
- - !!omap
- - id: "ENSG00000118137"
- - name: "APOA1"
- !!omap
- id: "ENSG00000118160"
- name: "SLC8A2"
@@ -309681,9 +308009,6 @@
- !!omap
- id: "ENSG00000126267"
- name: "COX6B1"
- - !!omap
- - id: "ENSG00000126368"
- - name: "NR1D1"
- !!omap
- id: "ENSG00000126432"
- name: "PRDX5"
@@ -310314,9 +308639,6 @@
- !!omap
- id: "ENSG00000135740"
- name: "SLC9A5"
- - !!omap
- - id: "ENSG00000135744"
- - name: "AGT"
- !!omap
- id: "ENSG00000135778"
- name: "NTPCR"
@@ -310383,12 +308705,18 @@
- !!omap
- id: "ENSG00000136521"
- name: "NDUFB5"
+ - !!omap
+ - id: "ENSG00000136531"
+ - name: "SCN2A"
- !!omap
- id: "ENSG00000136536"
- name: "MARCHF7"
- !!omap
- id: "ENSG00000136542"
- name: "GALNT5"
+ - !!omap
+ - id: "ENSG00000136546"
+ - name: "SCN7A"
- !!omap
- id: "ENSG00000136628"
- name: "EPRS1"
@@ -310476,9 +308804,6 @@
- !!omap
- id: "ENSG00000137563"
- name: "GGH"
- - !!omap
- - id: "ENSG00000137574"
- - name: "TGS1"
- !!omap
- id: "ENSG00000137731"
- name: "FXYD2"
@@ -310602,6 +308927,9 @@
- !!omap
- id: "ENSG00000138621"
- name: "PPCDC"
+ - !!omap
+ - id: "ENSG00000138622"
+ - name: "HCN4"
- !!omap
- id: "ENSG00000138641"
- name: "HERC3"
@@ -310635,9 +308963,6 @@
- !!omap
- id: "ENSG00000138821"
- name: "SLC39A8"
- - !!omap
- - id: "ENSG00000138823"
- - name: "MTTP"
- !!omap
- id: "ENSG00000138942"
- name: "RNF185"
@@ -310671,9 +308996,6 @@
- !!omap
- id: "ENSG00000139266"
- name: "MARCHF9"
- - !!omap
- - id: "ENSG00000139278"
- - name: "GLIPR1"
- !!omap
- id: "ENSG00000139287"
- name: "TPH2"
@@ -310770,9 +309092,6 @@
- !!omap
- id: "ENSG00000140374"
- name: "ETFA"
- - !!omap
- - id: "ENSG00000140396"
- - name: "NCOA2"
- !!omap
- id: "ENSG00000140400"
- name: "MAN2C1"
@@ -310830,9 +309149,6 @@
- !!omap
- id: "ENSG00000141012"
- name: "GALNS"
- - !!omap
- - id: "ENSG00000141027"
- - name: "NCOR1"
- !!omap
- id: "ENSG00000141096"
- name: "DPEP3"
@@ -310929,9 +309245,6 @@
- !!omap
- id: "ENSG00000142319"
- name: "SLC6A3"
- - !!omap
- - id: "ENSG00000142453"
- - name: "CARM1"
- !!omap
- id: "ENSG00000142494"
- name: "SLC47A1"
@@ -310950,9 +309263,6 @@
- !!omap
- id: "ENSG00000142657"
- name: "PGD"
- - !!omap
- - id: "ENSG00000142875"
- - name: "PRKACB"
- !!omap
- id: "ENSG00000142892"
- name: "PIGK"
@@ -311005,8 +309315,8 @@
- id: "ENSG00000143315"
- name: "PIGM"
- !!omap
- - id: "ENSG00000143344"
- - name: "RGL1"
+ - id: "ENSG00000143324"
+ - name: "XPR1"
- !!omap
- id: "ENSG00000143363"
- name: "PRUNE1"
@@ -311112,6 +309422,9 @@
- !!omap
- id: "ENSG00000144278"
- name: "GALNT13"
+ - !!omap
+ - id: "ENSG00000144285"
+ - name: "SCN1A"
- !!omap
- id: "ENSG00000144290"
- name: "SLC4A10"
@@ -311598,6 +309911,9 @@
- !!omap
- id: "ENSG00000153207"
- name: "AHCTF1"
+ - !!omap
+ - id: "ENSG00000153253"
+ - name: "SCN3A"
- !!omap
- id: "ENSG00000153291"
- name: "SLC25A27"
@@ -311904,9 +310220,6 @@
- !!omap
- id: "ENSG00000158865"
- name: "SLC5A11"
- - !!omap
- - id: "ENSG00000158874"
- - name: "APOA2"
- !!omap
- id: "ENSG00000159063"
- name: "ALG8"
@@ -312123,6 +310436,9 @@
- !!omap
- id: "ENSG00000162298"
- name: "SYVN1"
+ - !!omap
+ - id: "ENSG00000162341"
+ - name: "TPCN2"
- !!omap
- id: "ENSG00000162365"
- name: "CYP4A22"
@@ -312156,6 +310472,9 @@
- !!omap
- id: "ENSG00000162551"
- name: "ALPL"
+ - !!omap
+ - id: "ENSG00000162572"
+ - name: "SCNN1D"
- !!omap
- id: "ENSG00000162607"
- name: "USP1"
@@ -312402,6 +310721,9 @@
- !!omap
- id: "ENSG00000164574"
- name: "GALNT10"
+ - !!omap
+ - id: "ENSG00000164588"
+ - name: "HCN1"
- !!omap
- id: "ENSG00000164638"
- name: "SLC29A4"
@@ -312453,9 +310775,6 @@
- !!omap
- id: "ENSG00000165029"
- name: "ABCA1"
- - !!omap
- - id: "ENSG00000165059"
- - name: "PRKACG"
- !!omap
- id: "ENSG00000165060"
- name: "FXN"
@@ -312648,12 +310967,12 @@
- !!omap
- id: "ENSG00000166819"
- name: "PLIN1"
- - !!omap
- - id: "ENSG00000166821"
- - name: "PEX11A"
- !!omap
- id: "ENSG00000166825"
- name: "ANPEP"
+ - !!omap
+ - id: "ENSG00000166828"
+ - name: "SCNN1G"
- !!omap
- id: "ENSG00000166840"
- name: "GLYATL1"
@@ -312780,9 +311099,6 @@
- !!omap
- id: "ENSG00000167769"
- name: "ACER1"
- - !!omap
- - id: "ENSG00000167772"
- - name: "ANGPTL4"
- !!omap
- id: "ENSG00000167780"
- name: "SOAT2"
@@ -312855,12 +311171,18 @@
- !!omap
- id: "ENSG00000168350"
- name: "DEGS2"
+ - !!omap
+ - id: "ENSG00000168356"
+ - name: "SCN11A"
- !!omap
- id: "ENSG00000168393"
- name: "DTYMK"
- !!omap
- id: "ENSG00000168411"
- name: "RFWD3"
+ - !!omap
+ - id: "ENSG00000168447"
+ - name: "SCNN1B"
- !!omap
- id: "ENSG00000168487"
- name: "BMP1"
@@ -312882,9 +311204,6 @@
- !!omap
- id: "ENSG00000168679"
- name: "SLC16A4"
- - !!omap
- - id: "ENSG00000168710"
- - name: "AHCYL1"
- !!omap
- id: "ENSG00000168748"
- name: "CA7"
@@ -312942,12 +311261,12 @@
- !!omap
- id: "ENSG00000169359"
- name: "SLC33A1"
- - !!omap
- - id: "ENSG00000169375"
- - name: "SIN3A"
- !!omap
- id: "ENSG00000169418"
- name: "NPR1"
+ - !!omap
+ - id: "ENSG00000169432"
+ - name: "SCN9A"
- !!omap
- id: "ENSG00000169660"
- name: "HEXD"
@@ -313029,9 +311348,6 @@
- !!omap
- id: "ENSG00000170482"
- name: "SLC23A1"
- - !!omap
- - id: "ENSG00000170485"
- - name: "NPAS2"
- !!omap
- id: "ENSG00000170502"
- name: "NUDT9"
@@ -313137,9 +311453,6 @@
- !!omap
- id: "ENSG00000171608"
- name: "PIK3CD"
- - !!omap
- - id: "ENSG00000171720"
- - name: "HDAC3"
- !!omap
- id: "ENSG00000171723"
- name: "GPHN"
@@ -313239,9 +311552,6 @@
- !!omap
- id: "ENSG00000172508"
- name: "CARNS1"
- - !!omap
- - id: "ENSG00000172531"
- - name: "PPP1CA"
- !!omap
- id: "ENSG00000172543"
- name: "CTSW"
@@ -313596,9 +311906,6 @@
- !!omap
- id: "ENSG00000177542"
- name: "SLC25A22"
- - !!omap
- - id: "ENSG00000177565"
- - name: "TBL1XR1"
- !!omap
- id: "ENSG00000177628"
- name: "GBA"
@@ -313710,6 +312017,9 @@
- !!omap
- id: "ENSG00000180176"
- name: "TH"
+ - !!omap
+ - id: "ENSG00000180185"
+ - name: "FAHD1"
- !!omap
- id: "ENSG00000180210"
- name: "F2"
@@ -313920,6 +312230,9 @@
- !!omap
- id: "ENSG00000183828"
- name: "NUDT14"
+ - !!omap
+ - id: "ENSG00000183873"
+ - name: "SCN5A"
- !!omap
- id: "ENSG00000183921"
- name: "SDR42E2"
@@ -314013,6 +312326,9 @@
- !!omap
- id: "ENSG00000185274"
- name: "GALNT17"
+ - !!omap
+ - id: "ENSG00000185313"
+ - name: "SCN10A"
- !!omap
- id: "ENSG00000185344"
- name: "ATP6V0A2"
@@ -314100,18 +312416,12 @@
- !!omap
- id: "ENSG00000186281"
- name: "GPAT2"
- - !!omap
- - id: "ENSG00000186298"
- - name: "PPP1CC"
- !!omap
- id: "ENSG00000186334"
- name: "SLC36A3"
- !!omap
- id: "ENSG00000186335"
- name: "SLC36A2"
- - !!omap
- - id: "ENSG00000186350"
- - name: "RXRA"
- !!omap
- id: "ENSG00000186377"
- name: "CYP4X1"
@@ -314130,12 +312440,12 @@
- !!omap
- id: "ENSG00000186792"
- name: "HYAL3"
+ - !!omap
+ - id: "ENSG00000186815"
+ - name: "TPCN1"
- !!omap
- id: "ENSG00000186908"
- name: "ZDHHC17"
- - !!omap
- - id: "ENSG00000186951"
- - name: "PPARA"
- !!omap
- id: "ENSG00000187021"
- name: "PNLIPRP1"
@@ -314286,9 +312596,6 @@
- !!omap
- id: "ENSG00000196475"
- name: "GK2"
- - !!omap
- - id: "ENSG00000196498"
- - name: "NCOR2"
- !!omap
- id: "ENSG00000196502"
- name: "SULT1A1"
@@ -314313,6 +312620,9 @@
- !!omap
- id: "ENSG00000196839"
- name: "ADA"
+ - !!omap
+ - id: "ENSG00000196876"
+ - name: "SCN8A"
- !!omap
- id: "ENSG00000196950"
- name: "SLC39A10"
@@ -314511,9 +312821,6 @@
- !!omap
- id: "ENSG00000198610"
- name: "AKR1C4"
- - !!omap
- - id: "ENSG00000198646"
- - name: "NCOA6"
- !!omap
- id: "ENSG00000198650"
- name: "TAT"
@@ -314748,9 +313055,6 @@
- !!omap
- id: "ENSG00000213619"
- name: "NDUFS3"
- - !!omap
- - id: "ENSG00000213639"
- - name: "PPP1CB"
- !!omap
- id: "ENSG00000213648"
- name: "SULT1A4"
diff --git a/model/genes.tsv b/model/genes.tsv
index a0583ee6..4b17c98d 100644
--- a/model/genes.tsv
+++ b/model/genes.tsv
@@ -217,7 +217,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000069248" "ENST00000261396;ENST00000490352;ENST00000485119;ENST00000366678" "ENSP00000261396" "Q8WUM0" "NUP133" "55746" "nucleoporin 133" "FLJ10814" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000069431" "ENST00000261200;ENST00000683676;ENST00000683695;ENST00000682426;ENST00000683105;ENST00000684084;ENST00000682879;ENST00000261201;ENST00000544039;ENST00000683811;ENST00000682068;ENST00000684543;ENST00000682789;ENST00000326684;ENST00000621589;ENST00000538350;ENST00000684435;ENST00000636888;ENST00000682646;ENST00000683560" "ENSP00000261200;ENSP00000508167;ENSP00000506801;ENSP00000507859;ENSP00000508210;ENSP00000261201;ENSP00000440521;ENSP00000507226;ENSP00000317518;ENSP00000480233;ENSP00000442604;ENSP00000507779;ENSP00000490640" "O60706" "ABCC9" "10060" "ATP binding cassette subfamily C member 9" "CMD1O;SUR2" "Cytosol;Nucleus" "CellAtlas"
"ENSG00000069535" "ENST00000378069;ENST00000487544;ENST00000468431" "ENSP00000367309" "P27338" "MAOB" "4129" "monoamine oxidase B" "" "Cytosol" "SwissProt"
-"ENSG00000069667" "ENST00000335670;ENST00000309157;ENST00000261523;ENST00000449337;ENST00000559587;ENST00000551975;ENST00000560004;ENST00000559343;ENST00000558234;ENST00000557822;ENST00000559145;ENST00000561093;ENST00000560300;ENST00000558904" "ENSP00000335087;ENSP00000309753;ENSP00000261523;ENSP00000402971;ENSP00000449482;ENSP00000453322;ENSP00000484955" "P35398" "RORA" "6095" "RAR related orphan receptor A" "NR1F1;ROR1;ROR2;ROR3;RZRA" "Nucleus" "SwissProt;CellAtlas"
"ENSG00000069764" "ENST00000438167;ENST00000567462" "ENSP00000393847;ENSP00000456433" "O15496" "PLA2G10" "8399" "phospholipase A2 group X" "GXPLA2" "Cytosol;Lysosome" "SwissProt"
"ENSG00000069849" "ENST00000475483;ENST00000286371;ENST00000465172;ENST00000466678;ENST00000462082;ENST00000495216;ENST00000482635;ENST00000487199;ENST00000484727;ENST00000486782" "ENSP00000417522;ENSP00000286371;ENSP00000418280;ENSP00000418952;ENSP00000418353;ENSP00000419962;ENSP00000417608" "P54709" "ATP1B3" "483" "ATPase Na+/K+ transporting subunit beta 3" "CD298;FLJ29027" "Cell membrane" "DeepLoc2"
"ENSG00000069869" "ENST00000508871;ENST00000503468;ENST00000338963;ENST00000508342;ENST00000435532;ENST00000648451;ENST00000506154;ENST00000502612;ENST00000514893;ENST00000507063;ENST00000513957;ENST00000508075;ENST00000557845" "ENSP00000422455;ENSP00000426051;ENSP00000345530;ENSP00000424827;ENSP00000410613;ENSP00000498181;ENSP00000422705;ENSP00000424471;ENSP00000421047" "P46934" "NEDD4" "4734" "NEDD4 E3 ubiquitin protein ligase" "KIAA0093;MGC176705;NEDD4-1;RPF1" "Nucleus;Cytosol" "SwissProt;CellAtlas"
@@ -241,10 +240,8 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000071967" "ENST00000409484;ENST00000468308;ENST00000321348;ENST00000375252;ENST00000474182;ENST00000494587;ENST00000445146" "ENSP00000386739;ENSP00000319141;ENSP00000364401;ENSP00000402242" "Q53TN4" "CYBRD1" "79901" "cytochrome b reductase 1" "CYB561A2;DCYTB;FLJ23462;FRRS3" "Cell membrane;Lysosome;Golgi apparatus" "DeepLoc2"
"ENSG00000072041" "ENST00000266682;ENST00000681939;ENST00000548267;ENST00000680963;ENST00000680207;ENST00000681418;ENST00000680892;ENST00000681953;ENST00000680780;ENST00000679430;ENST00000681220;ENST00000680187;ENST00000680469;ENST00000679920;ENST00000681106;ENST00000681721;ENST00000679989;ENST00000309283;ENST00000680379;ENST00000552192;ENST00000679363;ENST00000679679;ENST00000679956;ENST00000679414;ENST00000680676;ENST00000551818;ENST00000681453;ENST00000551388;ENST00000679652;ENST00000679681;ENST00000681688;ENST00000680714;ENST00000450363;ENST00000679453;ENST00000681281;ENST00000680901;ENST00000547240;ENST00000681628;ENST00000679933;ENST00000680260;ENST00000551010;ENST00000549540;ENST00000680067;ENST00000681582;ENST00000551612" "ENSP00000266682;ENSP00000505485;ENSP00000506161;ENSP00000506546;ENSP00000506131;ENSP00000505934;ENSP00000505062;ENSP00000506491;ENSP00000505775;ENSP00000505789;ENSP00000505286;ENSP00000505134;ENSP00000311645;ENSP00000506716;ENSP00000450145;ENSP00000504902;ENSP00000505628;ENSP00000506482;ENSP00000505731;ENSP00000505814;ENSP00000390706;ENSP00000506425;ENSP00000506053;ENSP00000505705;ENSP00000505247;ENSP00000475035;ENSP00000448308" "Q9H2J7" "SLC6A15" "55117" "solute carrier family 6 member 15" "FLJ10316;hv7-3;NTT73;SBAT1;V7-3" "Nucleus" "CellAtlas"
"ENSG00000072042" "ENST00000381346;ENST00000553384;ENST00000553578;ENST00000428130;ENST00000554731;ENST00000554035;ENST00000553816;ENST00000557273;ENST00000557726;ENST00000557331;ENST00000556692" "ENSP00000370750;ENSP00000452079;ENSP00000416395;ENSP00000451280;ENSP00000450802;ENSP00000450651;ENSP00000450435;ENSP00000452108" "Q8TC12" "RDH11" "51109" "retinol dehydrogenase 11" "ARSDR1;MDT1;SDR7C1" "Endoplasmic reticulum" "SwissProt"
-"ENSG00000072062" "ENST00000677971;ENST00000677951;ENST00000308677;ENST00000350356;ENST00000590853;ENST00000587372;ENST00000589994;ENST00000588209;ENST00000679067;ENST00000587533;ENST00000536649;ENST00000593092;ENST00000589284;ENST00000678736" "ENSP00000502958;ENSP00000504551;ENSP00000309591;ENSP00000466976;ENSP00000468352;ENSP00000466651;ENSP00000503953;ENSP00000466289;ENSP00000466660" "P17612" "PRKACA" "5566" "protein kinase cAMP-activated catalytic subunit alpha" "PKACa" "Mitochondria;Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000072210" "ENST00000581518;ENST00000673136;ENST00000580550;ENST00000672465;ENST00000467473;ENST00000626500;ENST00000631291;ENST00000672357;ENST00000584332;ENST00000672564;ENST00000176643;ENST00000339618;ENST00000579855;ENST00000578614;ENST00000582991;ENST00000671878;ENST00000395575;ENST00000672487;ENST00000630662;ENST00000472059;ENST00000579403;ENST00000446398;ENST00000672567;ENST00000672709;ENST00000672059;ENST00000673472;ENST00000672322;ENST00000672608;ENST00000671841;ENST00000476965;ENST00000571537;ENST00000578696;ENST00000574078;ENST00000673064;ENST00000673516;ENST00000672591;ENST00000571163;ENST00000573947;ENST00000575384;ENST00000573565;ENST00000574597;ENST00000573505" "ENSP00000461916;ENSP00000500380;ENSP00000462964;ENSP00000500517;ENSP00000486283;ENSP00000486085;ENSP00000500092;ENSP00000466814;ENSP00000176643;ENSP00000345774;ENSP00000463637;ENSP00000463128;ENSP00000464153;ENSP00000500516;ENSP00000378942;ENSP00000500740;ENSP00000487353;ENSP00000458397;ENSP00000500777;ENSP00000499877;ENSP00000458942;ENSP00000464453;ENSP00000500558;ENSP00000459977;ENSP00000462933;ENSP00000461235;ENSP00000463924" "P51648" "ALDH3A2" "224" "aldehyde dehydrogenase 3 family member A2" "ALDH10;FALDH;SLS" "Endoplasmic reticulum;Cytosol" "SwissProt;CellAtlas"
"ENSG00000072274" "ENST00000426789;ENST00000360110;ENST00000420415;ENST00000392396;ENST00000463047;ENST00000475593;ENST00000483983;ENST00000463356;ENST00000482479;ENST00000465288;ENST00000477148;ENST00000464368;ENST00000491658;ENST00000421258;ENST00000464011" "ENSP00000414015;ENSP00000353224;ENSP00000390133;ENSP00000376197;ENSP00000402839" "P02786" "TFRC" "7037" "transferrin receptor" "CD71;p90;TFR1" "Lysosome" "CellAtlas"
-"ENSG00000072310" "ENST00000485080;ENST00000578469;ENST00000395757;ENST00000395756;ENST00000662439;ENST00000395751;ENST00000355815;ENST00000486311;ENST00000478616;ENST00000447641;ENST00000581707;ENST00000490796;ENST00000584760;ENST00000471445;ENST00000469356;ENST00000580540;ENST00000583080;ENST00000487401;ENST00000470247;ENST00000423161;ENST00000583732;ENST00000577897;ENST00000476994;ENST00000261646" "ENSP00000466643;ENSP00000465747;ENSP00000379106;ENSP00000474121;ENSP00000348069;ENSP00000466453;ENSP00000464923;ENSP00000411516;ENSP00000463474;ENSP00000261646" "P36956" "SREBF1" "6720" "sterol regulatory element binding transcription factor 1" "bHLHd1;SREBP-1c;SREBP1;SREBP1a" "Endoplasmic reticulum;Golgi apparatus;Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000072401" "ENST00000373910;ENST00000473824;ENST00000606483;ENST00000615793" "ENSP00000363019;ENSP00000479814" "P51668" "UBE2D1" "7321" "ubiquitin conjugating enzyme E2 D1" "E2(17)KB1;SFT;UBC4/5;UBCH5;UbcH5A" "Cytosol" "SwissProt;CellAtlas"
"ENSG00000072506" "ENST00000477706;ENST00000684251;ENST00000375304;ENST00000684692;ENST00000168216;ENST00000375298;ENST00000682365;ENST00000495986;ENST00000684503" "ENSP00000364453;ENSP00000506792;ENSP00000168216;ENSP00000364447" "Q99714" "HSD17B10" "3028" "hydroxysteroid 17-beta dehydrogenase 10" "17b-HSD10;ABAD;CAMR;ERAB;HADH2;MHBD;MRPP2;MRXS10;SDR5C1" "Mitochondria" "SwissProt"
"ENSG00000072609" "ENST00000541341;ENST00000266880;ENST00000536843;ENST00000545046;ENST00000443047;ENST00000450056;ENST00000544268;ENST00000315585;ENST00000432561;ENST00000544093;ENST00000535527;ENST00000538235;ENST00000502279;ENST00000511001;ENST00000535897;ENST00000541817;ENST00000540963;ENST00000540537;ENST00000542714;ENST00000536932;ENST00000537551;ENST00000535181;ENST00000536196;ENST00000499045" "ENSP00000266880;ENSP00000416431;ENSP00000398735;ENSP00000320557;ENSP00000392395;ENSP00000483699;ENSP00000478791;ENSP00000445371;ENSP00000441837;ENSP00000443237;ENSP00000443761;ENSP00000475247" "Q96EP1" "CHFR" "55743" "checkpoint with forkhead and ring finger domains" "FLJ10796;RNF196" "Nucleus" "SwissProt;CellAtlas"
@@ -480,7 +477,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000100867" "ENST00000553896;ENST00000432832;ENST00000250383;ENST00000556701;ENST00000344777;ENST00000556729;ENST00000611765;ENST00000557535;ENST00000553600;ENST00000556550" "ENSP00000401213;ENSP00000250383;ENSP00000344674;ENSP00000481607;ENSP00000451895;ENSP00000451485" "Q13268" "DHRS2" "10202" "dehydrogenase/reductase 2" "HEP27;SDR25C1" "Mitochondria;Nucleus" "SwissProt;CellAtlas"
"ENSG00000100889" "ENST00000559250;ENST00000560736;ENST00000396973;ENST00000559837;ENST00000560106;ENST00000545054;ENST00000561050;ENST00000561286;ENST00000216780;ENST00000558674;ENST00000560657;ENST00000559584;ENST00000558096;ENST00000559503;ENST00000559171;ENST00000557969" "ENSP00000453444;ENSP00000453998;ENSP00000380171;ENSP00000453751;ENSP00000454020;ENSP00000441826;ENSP00000454011;ENSP00000216780;ENSP00000452748;ENSP00000453656;ENSP00000453528;ENSP00000453791" "Q16822" "PCK2" "5106" "phosphoenolpyruvate carboxykinase 2, mitochondrial" "PEPCK;PEPCK2" "Mitochondria" "CellAtlas"
"ENSG00000100938" "ENST00000620807;ENST00000355299;ENST00000559836;ENST00000561038;ENST00000559287;ENST00000560139;ENST00000559910;ENST00000559801;ENST00000348719;ENST00000561035;ENST00000559409;ENST00000558865;ENST00000558279;ENST00000399440;ENST00000558701;ENST00000561130;ENST00000420554;ENST00000558760;ENST00000559102;ENST00000557854;ENST00000559104;ENST00000456667;ENST00000559606;ENST00000558483;ENST00000560517;ENST00000559943;ENST00000558007;ENST00000558748;ENST00000559479;ENST00000558932;ENST00000558788" "ENSP00000480342;ENSP00000347449;ENSP00000453299;ENSP00000452670;ENSP00000453594;ENSP00000453714;ENSP00000453537;ENSP00000334409;ENSP00000454009;ENSP00000453761;ENSP00000454138;ENSP00000453079;ENSP00000382369;ENSP00000453560;ENSP00000392859;ENSP00000452840;ENSP00000453895;ENSP00000454038;ENSP00000453355;ENSP00000405743;ENSP00000453139;ENSP00000452766;ENSP00000452683;ENSP00000452617;ENSP00000453833;ENSP00000453772" "Q9P2T1" "GMPR2" "51292" "guanosine monophosphate reductase 2" "" "Nucleus" "CellAtlas"
-"ENSG00000100979" "ENST00000354050;ENST00000372431;ENST00000372420;ENST00000477313;ENST00000420868" "ENSP00000335290;ENSP00000361508;ENSP00000361497;ENSP00000417138;ENSP00000411671" "P55058" "PLTP" "5360" "phospholipid transfer protein" "BPIFE" "Nucleus" "SwissProt"
"ENSG00000100983" "ENST00000651619;ENST00000646735;ENST00000646405;ENST00000645723;ENST00000643908;ENST00000642498;ENST00000644793;ENST00000643188;ENST00000646512;ENST00000645328;ENST00000643502;ENST00000644538;ENST00000643443;ENST00000642538;ENST00000644694;ENST00000645408;ENST00000646497;ENST00000642493;ENST00000646502;ENST00000646766;ENST00000643271;ENST00000644197;ENST00000643690;ENST00000645102;ENST00000643628;ENST00000643203;ENST00000644608;ENST00000451957" "ENSP00000498303;ENSP00000493763;ENSP00000493744;ENSP00000493631;ENSP00000495750;ENSP00000493903;ENSP00000495404;ENSP00000494819;ENSP00000495572;ENSP00000493927;ENSP00000496142;ENSP00000493524;ENSP00000494333;ENSP00000496125;ENSP00000495829;ENSP00000493500;ENSP00000407517" "P48637" "GSS" "2937" "glutathione synthetase" "" "Nucleus" "CellAtlas"
"ENSG00000100994" "ENST00000216962;ENST00000428458;ENST00000471359" "ENSP00000216962;ENSP00000395451" "P11216" "PYGB" "5834" "glycogen phosphorylase B" "" "Cytosol" "CellAtlas"
"ENSG00000100997" "ENST00000465694;ENST00000376542;ENST00000672871;ENST00000672331;ENST00000671858;ENST00000673524;ENST00000339157;ENST00000672114;ENST00000672596;ENST00000672358;ENST00000672258;ENST00000673227;ENST00000672406;ENST00000672566;ENST00000673121;ENST00000671784;ENST00000576316;ENST00000672001;ENST00000673094;ENST00000481556;ENST00000491682;ENST00000471287;ENST00000450393;ENST00000461204" "ENSP00000459278;ENSP00000365725;ENSP00000499949;ENSP00000500286;ENSP00000500550;ENSP00000500316;ENSP00000341408;ENSP00000499945;ENSP00000500290;ENSP00000500062;ENSP00000499868;ENSP00000500514;ENSP00000500208;ENSP00000500106;ENSP00000499839;ENSP00000500451;ENSP00000459121;ENSP00000500257;ENSP00000459495;ENSP00000460950;ENSP00000413311;ENSP00000460249" "Q8N2K0" "ABHD12" "26090" "abhydrolase domain containing 12, lysophospholipase" "ABHD12A;BEM46L2;C20orf22;dJ965G21.2;DKFZP434P106" "Endoplasmic reticulum" "SwissProt"
@@ -507,7 +503,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000101751" "ENST00000579534;ENST00000406285;ENST00000577612;ENST00000579434;ENST00000583136;ENST00000577971;ENST00000217800;ENST00000580880;ENST00000580905;ENST00000581950;ENST00000585023;ENST00000579823;ENST00000577361;ENST00000583576;ENST00000582366;ENST00000577727" "ENSP00000462664;ENSP00000385196;ENSP00000464025;ENSP00000462681;ENSP00000463071;ENSP00000217800;ENSP00000461983;ENSP00000462146;ENSP00000463971;ENSP00000463065" "Q9UNA4" "POLI" "11201" "DNA polymerase iota" "RAD30B;RAD3OB" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000101752" "ENST00000578646;ENST00000261537;ENST00000577749;ENST00000578260" "ENSP00000261537" "Q86YT6" "MIB1" "57534" "MIB E3 ubiquitin protein ligase 1" "DIP-1;KIAA1323;MIB;ZZANK2;ZZZ6" "Cytosol" "SwissProt"
"ENSG00000101846" "ENST00000664306;ENST00000666110;ENST00000674429;ENST00000660000;ENST00000658154;ENST00000217961;ENST00000674499" "ENSP00000499549;ENSP00000499472;ENSP00000501534;ENSP00000499642;ENSP00000217961;ENSP00000501360" "P08842" "STS" "412" "steroid sulfatase" "ARSC;ARSC1" "Cytosol;Endoplasmic reticulum" "SwissProt"
-"ENSG00000101849" "ENST00000407597;ENST00000380961;ENST00000424279;ENST00000645353;ENST00000422314;ENST00000645686;ENST00000646640;ENST00000647172;ENST00000452824;ENST00000415293;ENST00000683056;ENST00000647060;ENST00000497555;ENST00000684110" "ENSP00000385988;ENSP00000370348;ENSP00000394097;ENSP00000496215;ENSP00000415508;ENSP00000493782;ENSP00000495556;ENSP00000495835;ENSP00000397878;ENSP00000507708;ENSP00000495467" "O60907" "TBL1X" "6907" "transducin beta like 1 X-linked" "EBI;TBL1" "Nucleus" "SwissProt;CellAtlas"
"ENSG00000101868" "ENST00000678847;ENST00000672178;ENST00000379068;ENST00000677890;ENST00000379059;ENST00000676703;ENST00000611764;ENST00000493342;ENST00000678249;ENST00000480125;ENST00000677083;ENST00000679301;ENST00000494204;ENST00000677939" "ENSP00000500742;ENSP00000368358;ENSP00000503099;ENSP00000368349" "P09884" "POLA1" "5422" "DNA polymerase alpha 1, catalytic subunit" "NSX;p180;POLA" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000101871" "ENST00000453318;ENST00000380779;ENST00000380780;ENST00000317552;ENST00000380785;ENST00000380787;ENST00000380782;ENST00000675073;ENST00000674917;ENST00000479925;ENST00000413894;ENST00000616003;ENST00000675358;ENST00000610939" "ENSP00000414521;ENSP00000370156;ENSP00000370157;ENSP00000312678;ENSP00000370162;ENSP00000370164;ENSP00000370159;ENSP00000501707;ENSP00000502171;ENSP00000391154;ENSP00000484712;ENSP00000502220" "O15344" "MID1" "4281" "midline 1" "FXY;OS;RNF59;TRIM18" "Golgi apparatus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000101890" "ENST00000218006" "ENSP00000218006" "P51841" "GUCY2F" "2986" "guanylate cyclase 2F, retinal" "CYGF;GC-F;GUC2DL;RetGC-2;ROS-GC2" "Cell membrane" "DeepLoc2"
@@ -928,7 +923,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000118017" "ENST00000236709" "ENSP00000236709" "Q9UNA3" "A4GNT" "51146" "alpha-1,4-N-acetylglucosaminyltransferase" "alpha4GnT" "Golgi apparatus" "SwissProt"
"ENSG00000118058" "ENST00000389506;ENST00000534358;ENST00000531904;ENST00000649699;ENST00000532204;ENST00000529852;ENST00000533790;ENST00000527869;ENST00000649690;ENST00000648029;ENST00000647638;ENST00000649666;ENST00000648910;ENST00000420751;ENST00000392873;ENST00000649410;ENST00000528278;ENST00000534085;ENST00000647944;ENST00000649878;ENST00000648565;ENST00000534678;ENST00000527839;ENST00000525408" "ENSP00000374157;ENSP00000436786;ENSP00000432391;ENSP00000496927;ENSP00000434618;ENSP00000436564;ENSP00000436700;ENSP00000432652;ENSP00000497372;ENSP00000497918;ENSP00000498134;ENSP00000497891" "Q03164" "KMT2A" "4297" "lysine methyltransferase 2A" "ALL-1;CXXC7;HRX;HTRX1;MLL;MLL1A;TRX1" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000118094" "ENST00000264029;ENST00000613915;ENST00000397925;ENST00000531295;ENST00000527558" "ENSP00000264029;ENSP00000477923;ENSP00000381020" "O43280" "TREH" "11181" "trehalase" "MGC129621;TRE;TREA" "Cytosol" "CellAtlas"
-"ENSG00000118137" "ENST00000375320;ENST00000359492;ENST00000375329;ENST00000375323;ENST00000236850" "ENSP00000364469;ENSP00000352471;ENSP00000364478;ENSP00000364472;ENSP00000236850" "P02647" "APOA1" "335" "apolipoprotein A1" "" "Cytosol" "CellAtlas"
"ENSG00000118160" "ENST00000236877;ENST00000542837;ENST00000539381;ENST00000600576;ENST00000601757;ENST00000594353;ENST00000597014" "ENSP00000236877;ENSP00000437536;ENSP00000472233;ENSP00000472208" "Q9UPR5" "SLC8A2" "6543" "solute carrier family 8 member A2" "KIAA1087;NCX2" "Cell membrane" "DeepLoc2"
"ENSG00000118276" "ENST00000578114;ENST00000306851;ENST00000237019;ENST00000383131;ENST00000579372" "ENSP00000306459;ENSP00000237019;ENSP00000372613;ENSP00000463961" "Q9UBX8" "B4GALT6" "9331" "beta-1,4-galactosyltransferase 6" "beta4GalT-VI" "Golgi apparatus" "SwissProt"
"ENSG00000118298" "ENST00000369111;ENST00000647854;ENST00000582010;ENST00000607652;ENST00000483993;ENST00000607082" "ENSP00000358107;ENSP00000498013;ENSP00000475869;ENSP00000475238" "Q9ULX7" "CA14" "23632" "carbonic anhydrase 14" "" "Cell membrane" "DeepLoc2"
@@ -1071,7 +1065,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000126107" "ENST00000486132;ENST00000372168;ENST00000372172;ENST00000486296;ENST00000466423;ENST00000487488;ENST00000484564" "ENSP00000361241;ENSP00000361245" "Q5T447" "HECTD3" "79654" "HECT domain E3 ubiquitin protein ligase 3" "FLJ21156" "Cytosol" "SwissProt"
"ENSG00000126261" "ENST00000607361;ENST00000586313;ENST00000246548;ENST00000590048;ENST00000592841;ENST00000439527;ENST00000592672;ENST00000591016;ENST00000592791;ENST00000588585" "ENSP00000475565;ENSP00000468538;ENSP00000246548;ENSP00000467433;ENSP00000437484;ENSP00000468756;ENSP00000475656" "Q9UBT2" "UBA2" "10054" "ubiquitin like modifier activating enzyme 2" "FLJ13058;HRIHFB2115;SAE2" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000126267" "ENST00000649813;ENST00000592141;ENST00000392201;ENST00000652250;ENST00000590618" "ENSP00000497926;ENSP00000466818;ENSP00000376037;ENSP00000498883;ENSP00000467776" "P14854" "COX6B1" "1340" "cytochrome c oxidase subunit 6B1" "COX6B;COXG" "Inner mitochondria" "SwissProt;CellAtlas"
-"ENSG00000126368" "ENST00000246672" "ENSP00000246672" "P20393" "NR1D1" "9572" "nuclear receptor subfamily 1 group D member 1" "ear-1;hRev;Rev-ErbAalpha;REVERBA;REVERBalpha;THRA1;THRAL" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000126432" "ENST00000265462;ENST00000352435;ENST00000347941" "ENSP00000265462;ENSP00000335334;ENSP00000335363" "P30044" "PRDX5" "25824" "peroxiredoxin 5" "ACR1;AOEB166;B166;MGC117264;MGC142283;MGC142285;PLP;PMP20;PRDX6;PRXV;SBBI10" "Peroxisome;Mitochondria;Cytosol" "SwissProt;CellAtlas"
"ENSG00000126522" "ENST00000672586;ENST00000304874;ENST00000673518;ENST00000487982;ENST00000673350;ENST00000672498;ENST00000496336;ENST00000395332;ENST00000672676;ENST00000362000;ENST00000395331;ENST00000671817;ENST00000673594;ENST00000673149;ENST00000493708;ENST00000488343;ENST00000464970;ENST00000380839" "ENSP00000307188;ENSP00000499889;ENSP00000500227;ENSP00000378741;ENSP00000354710;ENSP00000378740;ENSP00000500462;ENSP00000500864;ENSP00000370219" "P04424" "ASL" "435" "argininosuccinate lyase" "ASAL" "Cytosol" "CellAtlas"
"ENSG00000126821" "ENST00000247225" "ENSP00000247225" "Q9BX95" "SGPP1" "81537" "sphingosine-1-phosphate phosphatase 1" "" "Endoplasmic reticulum;Nucleus" "SwissProt;CellAtlas"
@@ -1282,7 +1275,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000135697" "ENST00000563804;ENST00000258168;ENST00000564552" "ENSP00000457910;ENSP00000258168;ENSP00000455219" "Q9HAY6" "BCO1" "53630" "beta-carotene oxygenase 1" "BCDO;BCDO1;BCMO;BCMO1;FLJ10730" "Cytosol" "SwissProt"
"ENSG00000135702" "ENST00000336257;ENST00000565039" "ENSP00000338783;ENSP00000454375" "Q9GZS9" "CHST5" "23563" "carbohydrate sulfotransferase 5" "FLJ22167;I-GLCNAC-6-ST" "Golgi apparatus" "DeepLoc2"
"ENSG00000135740" "ENST00000564704;ENST00000566345;ENST00000564812;ENST00000563723;ENST00000561472;ENST00000299798;ENST00000566638;ENST00000567247;ENST00000566626" "ENSP00000462446;ENSP00000455058;ENSP00000299798;ENSP00000464393;ENSP00000462404" "Q14940" "SLC9A5" "6553" "solute carrier family 9 member A5" "NHE5" "Cytosol" "CellAtlas"
-"ENSG00000135744" "ENST00000680783;ENST00000679854;ENST00000679802;ENST00000681347;ENST00000681772;ENST00000679738;ENST00000657140;ENST00000681514;ENST00000680041;ENST00000366667;ENST00000681269;ENST00000679957;ENST00000679684" "ENSP00000506329;ENSP00000505184;ENSP00000505829;ENSP00000505063;ENSP00000505963;ENSP00000504866;ENSP00000355627;ENSP00000505985;ENSP00000506646;ENSP00000505981" "P01019" "AGT" "183" "angiotensinogen" "SERPINA8" "Extracellular" "DeepLoc2"
"ENSG00000135778" "ENST00000494689;ENST00000490807;ENST00000366628;ENST00000496662;ENST00000366627;ENST00000479125;ENST00000487953;ENST00000490098" "ENSP00000355587;ENSP00000355586" "Q9BSD7" "NTPCR" "84284" "nucleoside-triphosphatase, cancer-related" "C1orf57;HCR-NTPase;MGC13186;THEP1" "Cytosol" "CellAtlas"
"ENSG00000135821" "ENST00000642379;ENST00000331872;ENST00000491322;ENST00000339526;ENST00000463851;ENST00000461447;ENST00000484996;ENST00000489818;ENST00000475808;ENST00000480604;ENST00000462444;ENST00000311223;ENST00000417584" "ENSP00000494022;ENSP00000356537;ENSP00000344958;ENSP00000307900;ENSP00000398320" "P15104" "GLUL" "2752" "glutamate-ammonia ligase" "GLNS" "Mitochondria;Cytosol" "SwissProt;CellAtlas"
"ENSG00000135838" "ENST00000488424;ENST00000460690;ENST00000463899;ENST00000367555;ENST00000479721;ENST00000471010;ENST00000367553;ENST00000460179;ENST00000367552;ENST00000258317;ENST00000367554;ENST00000614468" "ENSP00000356526;ENSP00000356524;ENSP00000356523;ENSP00000258317;ENSP00000356525;ENSP00000482415" "Q9BXD5" "NPL" "80896" "N-acetylneuraminate pyruvate lyase" "C1orf13;DHDPS1;NPL1" "Cytosol" "SwissProt"
@@ -1336,7 +1328,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000137393" "ENST00000259939;ENST00000486622" "ENSP00000259939" "Q7Z419" "RNF144B" "255488" "ring finger protein 144B" "bA528A10.3;IBRDC2;P53RFP" "Mitochondria;Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000137491" "ENST00000526660;ENST00000531713;ENST00000289575;ENST00000532236;ENST00000531756;ENST00000531457;ENST00000525650;ENST00000454962;ENST00000530556;ENST00000534004;ENST00000527180;ENST00000525845;ENST00000534186;ENST00000428359;ENST00000526839;ENST00000530012;ENST00000528108;ENST00000530015;ENST00000341411" "ENSP00000432889;ENSP00000289575;ENSP00000434112;ENSP00000436324;ENSP00000389653;ENSP00000435384;ENSP00000431192;ENSP00000436513;ENSP00000431324;ENSP00000433872;ENSP00000388912;ENSP00000434742" "O94956" "SLCO2B1" "11309" "solute carrier organic anion transporter family member 2B1" "OATP-B;OATP2B1;SLC21A9" "Cell membrane" "DeepLoc2"
"ENSG00000137563" "ENST00000518466;ENST00000523788;ENST00000678069;ENST00000677459;ENST00000677482;ENST00000677919;ENST00000260118;ENST00000677327;ENST00000679326;ENST00000522852;ENST00000520609;ENST00000678045;ENST00000518113;ENST00000518966;ENST00000523479" "ENSP00000503731;ENSP00000504590;ENSP00000504579;ENSP00000260118;ENSP00000504262;ENSP00000504520" "Q92820" "GGH" "8836" "gamma-glutamyl hydrolase" "" "Lysosome" "SwissProt"
-"ENSG00000137574" "ENST00000260129;ENST00000523948;ENST00000519494" "ENSP00000260129;ENSP00000430467" "Q96RS0" "TGS1" "96764" "trimethylguanosine synthase 1" "NCOA6IP;PIMT" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000137731" "ENST00000514385;ENST00000532119;ENST00000528014;ENST00000292079;ENST00000260287;ENST00000534383;ENST00000533281;ENST00000317594" "ENSP00000436414;ENSP00000432430;ENSP00000292079;ENSP00000260287" "P54710" "FXYD2" "486" "FXYD domain containing ion transport regulator 2" "ATP1G1;HOMG2;MGC12372" "Mitochondria" "CellAtlas"
"ENSG00000137770" "ENST00000260327;ENST00000558791;ENST00000560834;ENST00000558966;ENST00000559793;ENST00000558968;ENST00000558373;ENST00000561189;ENST00000560620;ENST00000559738;ENST00000559175" "ENSP00000260327;ENSP00000453612;ENSP00000452837;ENSP00000454187;ENSP00000454154;ENSP00000453051;ENSP00000453538" "Q05D32" "CTDSPL2" "51496" "CTD small phosphatase like 2" "FLJ10523;HSPC129" "Nucleus" "CellAtlas"
"ENSG00000137817" "ENST00000569173;ENST00000569795;ENST00000260376;ENST00000616176;ENST00000413097;ENST00000287196;ENST00000569972;ENST00000564610;ENST00000567974;ENST00000544520;ENST00000565443;ENST00000566991;ENST00000567440;ENST00000567263;ENST00000566831;ENST00000419739;ENST00000567042;ENST00000569890;ENST00000568213;ENST00000565999;ENST00000568360;ENST00000566844;ENST00000567633" "ENSP00000456749;ENSP00000456348;ENSP00000260376;ENSP00000484561;ENSP00000287196;ENSP00000456468;ENSP00000455815;ENSP00000456370;ENSP00000454298;ENSP00000457752;ENSP00000403265;ENSP00000455637;ENSP00000455847;ENSP00000457134;ENSP00000457862;ENSP00000457187" "Q2NL67" "PARP6" "56965" "poly(ADP-ribose) polymerase family member 6" "ARTD17;pART17" "Cytosol;Nucleus" "DeepLoc2"
@@ -1389,7 +1380,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000138796" "ENST00000505878;ENST00000603302;ENST00000639335;ENST00000639146;ENST00000640201;ENST00000507260;ENST00000640752;ENST00000682197;ENST00000638621;ENST00000511742;ENST00000639013;ENST00000684696;ENST00000309522;ENST00000681992;ENST00000403312;ENST00000640060;ENST00000638559;ENST00000682373;ENST00000640586;ENST00000639698;ENST00000638648;ENST00000626637;ENST00000682067;ENST00000639784;ENST00000640048;ENST00000515462;ENST00000510728;ENST00000682086;ENST00000514776" "ENSP00000425952;ENSP00000474560;ENSP00000491310;ENSP00000492345;ENSP00000491581;ENSP00000425254;ENSP00000507675;ENSP00000312288;ENSP00000385638;ENSP00000492734;ENSP00000490998;ENSP00000508283;ENSP00000492674;ENSP00000492420;ENSP00000507949;ENSP00000486771;ENSP00000507544;ENSP00000491783;ENSP00000492009" "Q16836" "HADH" "3033" "hydroxyacyl-CoA dehydrogenase" "HADH1;HADHSC;SCHAD" "Mitochondria" "SwissProt;CellAtlas"
"ENSG00000138801" "ENST00000514815;ENST00000265174;ENST00000511304;ENST00000502431;ENST00000514489;ENST00000506544;ENST00000512641;ENST00000504987" "ENSP00000265174" "O43252" "PAPSS1" "9061" "3'-phosphoadenosine 5'-phosphosulfate synthase 1" "ATPSK1;PAPSS" "Nucleus" "CellAtlas"
"ENSG00000138821" "ENST00000424970;ENST00000682549;ENST00000394833;ENST00000356736;ENST00000683412;ENST00000682227;ENST00000683173;ENST00000682932;ENST00000683401;ENST00000684289;ENST00000683916;ENST00000682243;ENST00000683462;ENST00000684386;ENST00000683706;ENST00000683634;ENST00000683221;ENST00000512337;ENST00000510255;ENST00000514000;ENST00000512657;ENST00000502903" "ENSP00000394548;ENSP00000507483;ENSP00000378310;ENSP00000349174;ENSP00000507538;ENSP00000508363;ENSP00000508032;ENSP00000507414;ENSP00000506748;ENSP00000508106;ENSP00000507952;ENSP00000507170;ENSP00000507611;ENSP00000506745;ENSP00000507087;ENSP00000508093" "Q9C0K1" "SLC39A8" "64116" "solute carrier family 39 member 8" "BIGM103" "Lysosome" "SwissProt"
-"ENSG00000138823" "ENST00000457717;ENST00000504724;ENST00000511610;ENST00000505094;ENST00000511045;ENST00000422897;ENST00000265517" "ENSP00000400821;ENSP00000422178;ENSP00000422782;ENSP00000427679;ENSP00000407350;ENSP00000265517" "P55157" "MTTP" "4547" "microsomal triglyceride transfer protein" "ABL;MTP" "Endoplasmic reticulum;Golgi apparatus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000138942" "ENST00000494514;ENST00000326132;ENST00000471384;ENST00000518626;ENST00000468921;ENST00000266252;ENST00000426256" "ENSP00000320508;ENSP00000427755;ENSP00000266252;ENSP00000410916" "Q96GF1" "RNF185" "91445" "ring finger protein 185" "FLJ38628" "Endoplasmic reticulum" "SwissProt"
"ENSG00000139044" "ENST00000266383;ENST00000535680;ENST00000544638;ENST00000540836;ENST00000322843;ENST00000647602;ENST00000535402" "ENSP00000266383;ENSP00000322953" "Q6L9W6" "B4GALNT3" "283358" "beta-1,4-N-acetyl-galactosaminyltransferase 3" "B4GalNac-T3;FLJ16224;FLJ40362" "Golgi apparatus" "SwissProt;CellAtlas"
"ENSG00000139053" "ENST00000266395" "ENSP00000266395" "Q13956" "PDE6H" "5149" "phosphodiesterase 6H" "" "Cytosol;Nucleus" "DeepLoc2"
@@ -1401,7 +1391,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000139180" "ENST00000539573;ENST00000266544;ENST00000542369;ENST00000396655;ENST00000544679;ENST00000535050;ENST00000535726;ENST00000544675;ENST00000540688" "ENSP00000266544;ENSP00000440305;ENSP00000439818" "Q16795" "NDUFA9" "4704" "NADH:ubiquinone oxidoreductase subunit A9" "CI-39k;COQ11;NDUFS2L;SDR22E1" "Mitochondria;Nucleus" "SwissProt;CellAtlas"
"ENSG00000139209" "ENST00000447411;ENST00000266579;ENST00000550670;ENST00000547477;ENST00000546940" "ENSP00000389843;ENSP00000266579;ENSP00000448186;ENSP00000450071;ENSP00000448543" "Q969I6" "SLC38A4" "55089" "solute carrier family 38 member 4" "ATA3;NAT3;PAAT" "Cell membrane;Lysosome" "DeepLoc2"
"ENSG00000139266" "ENST00000266643;ENST00000552279;ENST00000548358" "ENSP00000266643;ENSP00000446758" "Q86YJ5" "MARCHF9" "92979" "membrane associated ring-CH-type finger 9" "FLJ36578;MARCH9;RNF179" "Lysosome;Golgi apparatus" "SwissProt"
-"ENSG00000139278" "ENST00000536703;ENST00000266659;ENST00000456650;ENST00000550491" "ENSP00000440595;ENSP00000266659;ENSP00000391144;ENSP00000448008" "P48060" "GLIPR1" "11010" "GLI pathogenesis related 1" "GliPR;RTVP1" "Extracellular" "DeepLoc2"
"ENSG00000139287" "ENST00000333850;ENST00000546576;ENST00000550403;ENST00000547348;ENST00000551074;ENST00000547278" "ENSP00000329093" "Q8IWU9" "TPH2" "121278" "tryptophan hydroxylase 2" "FLJ37295;NTPH" "Mitochondria" "DeepLoc2"
"ENSG00000139304" "ENST00000623635;ENST00000551042;ENST00000547376;ENST00000551573;ENST00000616559;ENST00000644991;ENST00000547485;ENST00000551624;ENST00000547881;ENST00000549355" "ENSP00000447522;ENSP00000448844;ENSP00000449133;ENSP00000483259;ENSP00000495607;ENSP00000449526" "A0A087WZU1" "PTPRQ" "374462" "protein tyrosine phosphatase receptor type Q" "DFNB84" "Cytosol" "CellAtlas"
"ENSG00000139344" "ENST00000266736;ENST00000548310;ENST00000553023;ENST00000549171" "ENSP00000266736;ENSP00000448632;ENSP00000448918" "Q96NU7" "AMDHD1" "144193" "amidohydrolase domain containing 1" "MGC35366" "Cytosol;Nucleus" "CellAtlas"
@@ -1434,7 +1423,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000140297" "ENST00000558721;ENST00000560874;ENST00000560580;ENST00000560111;ENST00000559189;ENST00000560585;ENST00000396065;ENST00000559626;ENST00000560210;ENST00000559200" "ENSP00000453453;ENSP00000452741;ENSP00000379377;ENSP00000453928;ENSP00000453774" "O95395" "GCNT3" "9245" "glucosaminyl (N-acetyl) transferase 3, mucin type" "C2/4GnT;C2GnT-M;C2GnT2" "Golgi apparatus" "CellAtlas"
"ENSG00000140367" "ENST00000267938;ENST00000569423;ENST00000561723;ENST00000561851;ENST00000562635;ENST00000426727;ENST00000567921;ENST00000563966" "ENSP00000267938;ENSP00000456324;ENSP00000458006;ENSP00000456229;ENSP00000400960;ENSP00000454742" "Q8WVN8" "UBE2Q2" "92912" "ubiquitin conjugating enzyme E2 Q2" "DKFZp762C143" "Cytosol" "SwissProt"
"ENSG00000140374" "ENST00000557943;ENST00000433983;ENST00000557975;ENST00000267950;ENST00000565910;ENST00000560179;ENST00000560726;ENST00000559602;ENST00000559973;ENST00000560595;ENST00000560899;ENST00000559075;ENST00000560044;ENST00000560816;ENST00000558803;ENST00000559758;ENST00000560345;ENST00000559386;ENST00000560309;ENST00000561092" "ENSP00000452762;ENSP00000399273;ENSP00000267950;ENSP00000458001;ENSP00000453098;ENSP00000452659;ENSP00000454194;ENSP00000453345;ENSP00000453422;ENSP00000452942;ENSP00000453017;ENSP00000452777;ENSP00000453753" "P13804" "ETFA" "2108" "electron transfer flavoprotein subunit alpha" "EMA;GA2;MADD" "Mitochondria" "SwissProt;CellAtlas"
-"ENSG00000140396" "ENST00000452400;ENST00000518287;ENST00000518363;ENST00000521239;ENST00000522054;ENST00000524223;ENST00000519724;ENST00000520416" "ENSP00000399968;ENSP00000430148;ENSP00000429132;ENSP00000430348;ENSP00000430850" "Q15596" "NCOA2" "10499" "nuclear receptor coactivator 2" "bHLHe75;GRIP1;KAT13C;NCoA-2;TIF2" "Nucleus" "SwissProt;CellAtlas"
"ENSG00000140400" "ENST00000631426;ENST00000563660;ENST00000562067;ENST00000564929;ENST00000569482;ENST00000565683;ENST00000563622;ENST00000267978;ENST00000561693;ENST00000566099;ENST00000566569;ENST00000563528;ENST00000567163;ENST00000564570;ENST00000564785;ENST00000567360;ENST00000563441;ENST00000563368;ENST00000569176;ENST00000566013;ENST00000563794;ENST00000565953;ENST00000563596;ENST00000566634;ENST00000562461;ENST00000562228;ENST00000563058;ENST00000566253;ENST00000563013;ENST00000568944;ENST00000421803;ENST00000570257;ENST00000565801;ENST00000565784;ENST00000563539;ENST00000565699;ENST00000569355;ENST00000568374;ENST00000565534;ENST00000566256;ENST00000562071;ENST00000561615;ENST00000569069;ENST00000565652;ENST00000618257" "ENSP00000455998;ENSP00000457788;ENSP00000454589;ENSP00000267978;ENSP00000456914;ENSP00000390738;ENSP00000456667;ENSP00000456419;ENSP00000454406;ENSP00000456257;ENSP00000455788;ENSP00000455803;ENSP00000457833;ENSP00000479988" "Q9NTJ4" "MAN2C1" "4123" "mannosidase alpha class 2C member 1" "MANA;MANA1" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000140455" "ENST00000561442;ENST00000560070;ENST00000380324;ENST00000557884;ENST00000558157;ENST00000561326;ENST00000559873;ENST00000559192;ENST00000559771;ENST00000559276;ENST00000558285;ENST00000559257;ENST00000538686;ENST00000559711;ENST00000558925;ENST00000558218;ENST00000561381;ENST00000559718;ENST00000560202;ENST00000540797;ENST00000268049" "ENSP00000453688;ENSP00000453194;ENSP00000369681;ENSP00000454043;ENSP00000452929;ENSP00000453767;ENSP00000453228;ENSP00000453093;ENSP00000454197;ENSP00000453619;ENSP00000452947;ENSP00000445793;ENSP00000453138;ENSP00000453489;ENSP00000445828;ENSP00000268049" "Q9Y6I4" "USP3" "9960" "ubiquitin specific peptidase 3" "" "Nucleus" "SwissProt;CellAtlas"
"ENSG00000140459" "ENST00000358632;ENST00000268053;ENST00000498141;ENST00000435365;ENST00000566674;ENST00000450547;ENST00000569662;ENST00000466978;ENST00000416978;ENST00000467407" "ENSP00000351455;ENSP00000268053;ENSP00000391081;ENSP00000456941;ENSP00000402064;ENSP00000456598;ENSP00000388018" "P05108" "CYP11A1" "1583" "cytochrome P450 family 11 subfamily A member 1" "CYP11A;P450SCC" "Inner mitochondria" "SwissProt"
@@ -1454,7 +1442,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000140905" "ENST00000315467;ENST00000640150;ENST00000564386;ENST00000639689;ENST00000639169;ENST00000569885;ENST00000639137;ENST00000561801;ENST00000566566;ENST00000564477" "ENSP00000319531;ENSP00000492163;ENSP00000457630;ENSP00000492187;ENSP00000491127;ENSP00000455579;ENSP00000457645;ENSP00000455019;ENSP00000455287" "P23434" "GCSH" "2653" "glycine cleavage system protein H" "" "Mitochondria" "SwissProt"
"ENSG00000140990" "ENST00000268668;ENST00000543683;ENST00000565031;ENST00000569148;ENST00000570172" "ENSP00000268668;ENSP00000445086;ENSP00000455348;ENSP00000457908" "O96000" "NDUFB10" "4716" "NADH:ubiquinone oxidoreductase subunit B10" "PDSW" "Inner mitochondria" "SwissProt"
"ENSG00000141012" "ENST00000268695;ENST00000562593;ENST00000567525;ENST00000568613;ENST00000564263;ENST00000562931;ENST00000566563;ENST00000562831;ENST00000561812;ENST00000565364;ENST00000567779;ENST00000568311;ENST00000569433" "ENSP00000268695;ENSP00000454484;ENSP00000457921;ENSP00000455174;ENSP00000455006;ENSP00000456884" "P34059" "GALNS" "2588" "galactosamine (N-acetyl)-6-sulfatase" "GALNAC6S;GAS" "Cytosol;Lysosome" "SwissProt;CellAtlas"
-"ENSG00000141027" "ENST00000268712;ENST00000464381;ENST00000470782;ENST00000395851;ENST00000580617;ENST00000395849;ENST00000582565;ENST00000579573;ENST00000603989;ENST00000580554;ENST00000579606;ENST00000583234;ENST00000458113;ENST00000472189;ENST00000584872;ENST00000436068;ENST00000395848;ENST00000583226;ENST00000411510;ENST00000582357;ENST00000436828;ENST00000460276;ENST00000585296;ENST00000579974;ENST00000430577;ENST00000466825;ENST00000395857" "ENSP00000268712;ENSP00000379192;ENSP00000379190;ENSP00000461959;ENSP00000474008;ENSP00000463169;ENSP00000462281;ENSP00000389839;ENSP00000379189;ENSP00000407998;ENSP00000462308;ENSP00000387727;ENSP00000462794;ENSP00000410784;ENSP00000379198" "O75376" "NCOR1" "9611" "nuclear receptor corepressor 1" "hCIT529I10;hN-CoR;KIAA1047;MGC104216;N-CoR;PPP1R109;TRAC1" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000141096" "ENST00000268793;ENST00000574342;ENST00000672962" "ENSP00000268793;ENSP00000500237" "Q9H4B8" "DPEP3" "64180" "dipeptidase 3" "" "Cell membrane" "DeepLoc2"
"ENSG00000141179" "ENST00000268896;ENST00000576183;ENST00000573500;ENST00000417982;ENST00000325214;ENST00000571489;ENST00000576221;ENST00000572536" "ENSP00000268896;ENSP00000459793;ENSP00000460437;ENSP00000415185;ENSP00000325181;ENSP00000461676" "Q9UKL6" "PCTP" "58488" "phosphatidylcholine transfer protein" "STARD2" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000141279" "ENST00000525007;ENST00000525037;ENST00000677710;ENST00000530173;ENST00000526247;ENST00000677226;ENST00000532729;ENST00000678461;ENST00000322157;ENST00000533573;ENST00000677120;ENST00000678909;ENST00000528751;ENST00000678496;ENST00000678262;ENST00000677370;ENST00000677664;ENST00000527298;ENST00000534691;ENST00000602788;ENST00000527824;ENST00000676492;ENST00000534727;ENST00000534814;ENST00000525401;ENST00000527964;ENST00000530514;ENST00000527360;ENST00000533538;ENST00000525021;ENST00000678902;ENST00000529602;ENST00000534807;ENST00000525048;ENST00000531486;ENST00000528565" "ENSP00000437019;ENSP00000504357;ENSP00000433287;ENSP00000433735;ENSP00000504389;ENSP00000434554;ENSP00000504752;ENSP00000320324;ENSP00000503682;ENSP00000503450;ENSP00000503773;ENSP00000503738;ENSP00000503284;ENSP00000434585;ENSP00000433649;ENSP00000435639;ENSP00000436733;ENSP00000435966;ENSP00000504519;ENSP00000432127;ENSP00000433549" "P55786" "NPEPPS" "9520" "aminopeptidase puromycin sensitive" "MP100;PSA" "Nucleus;Cytosol" "SwissProt;CellAtlas"
@@ -1487,14 +1474,12 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000142230" "ENST00000594144;ENST00000594526;ENST00000597808;ENST00000413379;ENST00000600706;ENST00000598840;ENST00000414294;ENST00000600753;ENST00000270225;ENST00000660039;ENST00000596995;ENST00000664120;ENST00000392776;ENST00000659110" "ENSP00000471010;ENSP00000472389;ENSP00000469938;ENSP00000416557;ENSP00000468931;ENSP00000470741;ENSP00000398818;ENSP00000469978;ENSP00000270225;ENSP00000499743;ENSP00000473037;ENSP00000499784;ENSP00000440818;ENSP00000499761" "Q9UBE0" "SAE1" "10055" "SUMO1 activating enzyme subunit 1" "AOS1;FLJ3091;Sua1" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000142273" "ENST00000341505;ENST00000647358;ENST00000647063" "ENSP00000340250;ENSP00000494162;ENSP00000495258" "Q9ULV8" "CBLC" "23624" "Cbl proto-oncogene C" "CBL-3;CBL-SL;RNF57" "Cytosol;Nucleus" "CellAtlas"
"ENSG00000142319" "ENST00000270349;ENST00000512002;ENST00000511750" "ENSP00000270349" "Q01959" "SLC6A3" "6531" "solute carrier family 6 member 3" "DAT;DAT1" "Cell membrane" "DeepLoc2"
-"ENSG00000142453" "ENST00000327064;ENST00000588947;ENST00000590699;ENST00000344150;ENST00000586221;ENST00000590039;ENST00000589693;ENST00000586508;ENST00000586298;ENST00000592516" "ENSP00000325690;ENSP00000465417;ENSP00000467420;ENSP00000340934;ENSP00000467746;ENSP00000464852;ENSP00000468319;ENSP00000467761" "Q86X55" "CARM1" "10498" "coactivator associated arginine methyltransferase 1" "PRMT4" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000142494" "ENST00000584348;ENST00000571335;ENST00000436810;ENST00000270570;ENST00000574596;ENST00000576095;ENST00000575023;ENST00000497548;ENST00000395585;ENST00000495425;ENST00000575377;ENST00000573009;ENST00000575362;ENST00000581558" "ENSP00000462630;ENSP00000407155;ENSP00000270570;ENSP00000460164;ENSP00000378951;ENSP00000462225" "Q96FL8" "SLC47A1" "55244" "solute carrier family 47 member 1" "FLJ10847;MATE1" "Cell membrane" "DeepLoc2"
"ENSG00000142513" "ENST00000270593" "ENSP00000270593" "Q9BZG2" "ACP4" "93650" "acid phosphatase 4" "ACPT" "Cell membrane;Lysosome" "DeepLoc2"
"ENSG00000142583" "ENST00000377424;ENST00000487492;ENST00000377414;ENST00000484798;ENST00000474145;ENST00000479813;ENST00000486632;ENST00000487835;ENST00000464985;ENST00000473209" "ENSP00000366641;ENSP00000366631;ENSP00000467039;ENSP00000464880;ENSP00000468590;ENSP00000465507;ENSP00000465382;ENSP00000467840;ENSP00000465285" "P22732" "SLC2A5" "6518" "solute carrier family 2 member 5" "GLUT5" "Cell membrane" "DeepLoc2"
"ENSG00000142619" "ENST00000375460" "ENSP00000364609" "Q9ULW8" "PADI3" "51702" "peptidyl arginine deiminase 3" "PDI3" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000142623" "ENST00000375471;ENST00000483501;ENST00000648847;ENST00000460293" "ENSP00000364620" "Q9ULC6" "PADI1" "29943" "peptidyl arginine deiminase 1" "HPAD10;PAD1;PDI;PDI1" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000142657" "ENST00000491493;ENST00000487775;ENST00000270776;ENST00000477958;ENST00000483936;ENST00000465632;ENST00000460189;ENST00000493288;ENST00000498356;ENST00000496718" "ENSP00000466358;ENSP00000270776;ENSP00000465311;ENSP00000466156;ENSP00000466574;ENSP00000467362" "P52209" "PGD" "5226" "phosphogluconate dehydrogenase" "" "Cytosol" "SwissProt;CellAtlas"
-"ENSG00000142875" "ENST00000370689;ENST00000370688;ENST00000370685;ENST00000470673;ENST00000370684;ENST00000436133;ENST00000446538;ENST00000432111;ENST00000450730;ENST00000370680;ENST00000413538;ENST00000417530;ENST00000394839;ENST00000467507;ENST00000610703;ENST00000614872;ENST00000610457;ENST00000370682;ENST00000394838" "ENSP00000359723;ENSP00000359722;ENSP00000359719;ENSP00000359718;ENSP00000390906;ENSP00000401252;ENSP00000392275;ENSP00000393654;ENSP00000359714;ENSP00000397175;ENSP00000399326;ENSP00000378315;ENSP00000481980;ENSP00000479722;ENSP00000479339;ENSP00000359716;ENSP00000378314" "P22694" "PRKACB" "5567" "protein kinase cAMP-activated catalytic subunit beta" "PKACb" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000142892" "ENST00000370812;ENST00000445065;ENST00000487906;ENST00000359130;ENST00000478391" "ENSP00000359848;ENSP00000388854;ENSP00000474518;ENSP00000352041" "Q92643" "PIGK" "10026" "phosphatidylinositol glycan anchor biosynthesis class K" "GPI8;hGPI8" "Endoplasmic reticulum" "SwissProt"
"ENSG00000142920" "ENST00000478635;ENST00000481886;ENST00000475935;ENST00000294517;ENST00000462920;ENST00000471119;ENST00000495135;ENST00000477570;ENST00000483027;ENST00000492420;ENST00000373443;ENST00000497710;ENST00000473089;ENST00000652171;ENST00000484656;ENST00000373440;ENST00000652381;ENST00000373441;ENST00000478204;ENST00000497280;ENST00000492521" "ENSP00000294517;ENSP00000362542;ENSP00000498229;ENSP00000362539;ENSP00000362540" "Q96A70" "AZIN2" "113451" "antizyme inhibitor 2" "ADC;KIAA1945;ODC-p;ODC1L;ODCp" "Endoplasmic reticulum;Golgi apparatus;Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000142973" "ENST00000546128;ENST00000413093;ENST00000640628;ENST00000534708;ENST00000271153;ENST00000371923;ENST00000529715;ENST00000464439;ENST00000371919;ENST00000614163;ENST00000526297;ENST00000452782;ENST00000468637;ENST00000481248;ENST00000497005" "ENSP00000492115;ENSP00000433367;ENSP00000271153;ENSP00000360991;ENSP00000443212;ENSP00000433068;ENSP00000360987;ENSP00000484629;ENSP00000438995" "P13584" "CYP4B1" "1580" "cytochrome P450 family 4 subfamily B member 1" "" "Endoplasmic reticulum" "SwissProt"
@@ -1512,7 +1497,7 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000143258" "ENST00000492950;ENST00000289865;ENST00000368002;ENST00000479344;ENST00000368001;ENST00000486299;ENST00000487163;ENST00000482385;ENST00000493054;ENST00000485277" "ENSP00000476344;ENSP00000289865;ENSP00000356981;ENSP00000476830;ENSP00000356980;ENSP00000492693;ENSP00000491514" "Q9UK80" "USP21" "27005" "ubiquitin specific peptidase 21" "USP16;USP23" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000143278" "ENST00000649282;ENST00000367412;ENST00000490002" "ENSP00000497116;ENSP00000356382" "P05160" "F13B" "2165" "coagulation factor XIII B chain" "FXIIIB" "Extracellular" "DeepLoc2"
"ENSG00000143315" "ENST00000368090" "ENSP00000357069" "Q9H3S5" "PIGM" "93183" "phosphatidylinositol glycan anchor biosynthesis class M" "GPI-MT-I" "Endoplasmic reticulum" "DeepLoc2"
-"ENSG00000143344" "ENST00000304685;ENST00000360851" "ENSP00000303192;ENSP00000354097" "Q9NZL6" "RGL1" "23179" "ral guanine nucleotide dissociation stimulator like 1" "RGL" "Golgi apparatus;Nucleus" "CellAtlas"
+"ENSG00000143324" "ENST00000367590;ENST00000367589" "ENSP00000356562;ENSP00000356561" "Q9UBH6" "XPR1" "9213" "xenotropic and polytropic retrovirus receptor 1" "SYG1;X3;SLC53A1" "" ""
"ENSG00000143363" "ENST00000467771;ENST00000271620;ENST00000462440;ENST00000650332;ENST00000475722;ENST00000450884;ENST00000368937;ENST00000431193;ENST00000368936;ENST00000368935;ENST00000368934" "ENSP00000271620;ENSP00000497847;ENSP00000387696;ENSP00000357933;ENSP00000392632;ENSP00000357932;ENSP00000357931;ENSP00000357930" "Q86TP1" "PRUNE1" "58497" "prune exopolyphosphatase 1" "DRES-17;H-PRUNE;HTCD37;PRUNE" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000143379" "ENST00000525956;ENST00000487584;ENST00000463774;ENST00000271640;ENST00000448029;ENST00000368962;ENST00000534805;ENST00000368969;ENST00000368963;ENST00000459773;ENST00000498193;ENST00000368964;ENST00000423081;ENST00000481219;ENST00000497314;ENST00000528749;ENST00000533529" "ENSP00000435922;ENSP00000271640;ENSP00000409379;ENSP00000357958;ENSP00000436148;ENSP00000357965;ENSP00000357959;ENSP00000432348;ENSP00000357960;ENSP00000407831" "Q15047" "SETDB1" "9869" "SET domain bifurcated histone lysine methyltransferase 1" "ESET;KG1T;KIAA0067;KMT1E;TDRD21" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000143387" "ENST00000678337;ENST00000676716;ENST00000676966;ENST00000443913;ENST00000271651;ENST00000676970;ENST00000679260;ENST00000676680;ENST00000676751;ENST00000677887;ENST00000676824;ENST00000677611;ENST00000678725;ENST00000679148;ENST00000480670;ENST00000679090;ENST00000678275;ENST00000677330;ENST00000679178;ENST00000679171" "ENSP00000504759;ENSP00000504737;ENSP00000503723;ENSP00000405083;ENSP00000271651;ENSP00000503832;ENSP00000504534;ENSP00000503270;ENSP00000502964;ENSP00000503876;ENSP00000504176;ENSP00000504796" "P43235" "CTSK" "1513" "cathepsin K" "CTSO;CTSO2;PKND;PYCD" "Lysosome" "SwissProt"
@@ -1812,7 +1797,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000158850" "ENST00000319769;ENST00000470882;ENST00000622395;ENST00000367998;ENST00000486938;ENST00000466504;ENST00000465740;ENST00000493164;ENST00000496313;ENST00000487004;ENST00000460415;ENST00000482288;ENST00000467863" "ENSP00000320965;ENSP00000480428;ENSP00000356977" "O60512" "B4GALT3" "8703" "beta-1,4-galactosyltransferase 3" "beta4Gal-T3" "Golgi apparatus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000158864" "ENST00000479948;ENST00000677550;ENST00000676600;ENST00000676653;ENST00000678507;ENST00000496133;ENST00000679064;ENST00000677383;ENST00000677579;ENST00000679215;ENST00000678793;ENST00000677178;ENST00000678052;ENST00000677138;ENST00000677457;ENST00000677613;ENST00000677925;ENST00000676535;ENST00000677547;ENST00000678613;ENST00000677231;ENST00000679282;ENST00000677081;ENST00000677350;ENST00000678605;ENST00000677809;ENST00000678966;ENST00000678911;ENST00000677807;ENST00000677846;ENST00000678492;ENST00000679176;ENST00000367993;ENST00000676991;ENST00000678130;ENST00000496553;ENST00000467295;ENST00000392179;ENST00000678511;ENST00000677453;ENST00000677736;ENST00000678328;ENST00000676583;ENST00000493849;ENST00000677657;ENST00000676726;ENST00000677916;ENST00000677495;ENST00000678484;ENST00000679239;ENST00000677050;ENST00000678850;ENST00000677653;ENST00000678783;ENST00000676871;ENST00000677577;ENST00000678982;ENST00000677063;ENST00000677045;ENST00000679218;ENST00000677837;ENST00000679169;ENST00000678880;ENST00000677745;ENST00000677358;ENST00000677089;ENST00000480762;ENST00000678532;ENST00000677643;ENST00000678648;ENST00000677336;ENST00000677471;ENST00000677948;ENST00000678068;ENST00000676972;ENST00000475570;ENST00000678559;ENST00000676795;ENST00000478866;ENST00000677103;ENST00000679142;ENST00000676770;ENST00000677033;ENST00000679071;ENST00000678356;ENST00000473321;ENST00000465923;ENST00000483804;ENST00000468828;ENST00000492153" "ENSP00000503353;ENSP00000503989;ENSP00000504199;ENSP00000502868;ENSP00000504162;ENSP00000503431;ENSP00000504839;ENSP00000503294;ENSP00000504258;ENSP00000504269;ENSP00000503378;ENSP00000504533;ENSP00000503728;ENSP00000503969;ENSP00000503946;ENSP00000504065;ENSP00000504170;ENSP00000356972;ENSP00000376018;ENSP00000504846;ENSP00000503604;ENSP00000503681;ENSP00000504555;ENSP00000504542;ENSP00000504215;ENSP00000504597;ENSP00000504572;ENSP00000504168;ENSP00000504577;ENSP00000503661;ENSP00000504096;ENSP00000503015;ENSP00000504682;ENSP00000503510;ENSP00000503117;ENSP00000504285;ENSP00000504650;ENSP00000504800" "O75306" "NDUFS2" "4720" "NADH:ubiquinone oxidoreductase core subunit S2" "CI-49" "Inner mitochondria" "SwissProt;CellAtlas"
"ENSG00000158865" "ENST00000347898;ENST00000488922;ENST00000564125;ENST00000565769;ENST00000569520;ENST00000568579;ENST00000567758;ENST00000569071;ENST00000565586;ENST00000545376;ENST00000449109;ENST00000424767" "ENSP00000289932;ENSP00000458806;ENSP00000457179;ENSP00000454732;ENSP00000456234;ENSP00000454401;ENSP00000456376;ENSP00000441384;ENSP00000389606;ENSP00000416782" "Q8WWX8" "SLC5A11" "115584" "solute carrier family 5 member 11" "KST1;SGLT6;SMIT2" "Cytosol;Nucleus" "CellAtlas"
-"ENSG00000158874" "ENST00000481413;ENST00000367990;ENST00000463812;ENST00000468465;ENST00000481511;ENST00000470459;ENST00000464492;ENST00000491350;ENST00000463273;ENST00000469730" "ENSP00000356969;ENSP00000476890;ENSP00000476662;ENSP00000477054;ENSP00000477031;ENSP00000476911;ENSP00000477353;ENSP00000476740;ENSP00000476605" "P02652" "APOA2" "336" "apolipoprotein A2" "" "Extracellular" "DeepLoc2"
"ENSG00000159063" "ENST00000679559;ENST00000680398;ENST00000681221;ENST00000680761;ENST00000525783;ENST00000529139;ENST00000527099;ENST00000681489;ENST00000525870;ENST00000531213;ENST00000681853;ENST00000524925;ENST00000679581;ENST00000680329;ENST00000530910;ENST00000681417;ENST00000681225;ENST00000681765;ENST00000530608;ENST00000680063;ENST00000679986;ENST00000681699;ENST00000680459;ENST00000679685;ENST00000681384;ENST00000679874;ENST00000679444;ENST00000680142;ENST00000681723;ENST00000680797;ENST00000680256;ENST00000679697;ENST00000680580;ENST00000526849;ENST00000299626;ENST00000680467;ENST00000679497;ENST00000681351;ENST00000681575;ENST00000526737;ENST00000680223;ENST00000680866;ENST00000376156;ENST00000680499;ENST00000680829;ENST00000680101;ENST00000679648;ENST00000532306;ENST00000680996;ENST00000532440;ENST00000525761;ENST00000680399;ENST00000679539;ENST00000615266;ENST00000681957;ENST00000532552;ENST00000680643;ENST00000530454;ENST00000525755;ENST00000532050;ENST00000680650;ENST00000526928" "ENSP00000505433;ENSP00000506189;ENSP00000505136;ENSP00000506421;ENSP00000434066;ENSP00000432953;ENSP00000436064;ENSP00000505200;ENSP00000435417;ENSP00000506215;ENSP00000437033;ENSP00000505965;ENSP00000505016;ENSP00000505811;ENSP00000432381;ENSP00000504928;ENSP00000505614;ENSP00000504969;ENSP00000506617;ENSP00000505698;ENSP00000506249;ENSP00000506314;ENSP00000506099;ENSP00000506059;ENSP00000506717;ENSP00000505074;ENSP00000505696;ENSP00000506170;ENSP00000434388;ENSP00000299626;ENSP00000505609;ENSP00000505407;ENSP00000506652;ENSP00000505743;ENSP00000436366;ENSP00000505023;ENSP00000505649;ENSP00000365326;ENSP00000506092;ENSP00000506408;ENSP00000504917;ENSP00000505726;ENSP00000435626;ENSP00000505468;ENSP00000433429;ENSP00000431357;ENSP00000505984;ENSP00000504910;ENSP00000480742;ENSP00000506056;ENSP00000505207;ENSP00000434660;ENSP00000435467;ENSP00000437199" "Q9BVK2" "ALG8" "79053" "ALG8 alpha-1,3-glucosyltransferase" "MGC2840" "Endoplasmic reticulum;Nucleus" "SwissProt;CellAtlas"
"ENSG00000159082" "ENST00000438952;ENST00000630077;ENST00000674204;ENST00000674351;ENST00000674308;ENST00000418301;ENST00000467445;ENST00000464778;ENST00000429236;ENST00000456084;ENST00000382499;ENST00000433931;ENST00000357345;ENST00000382491" "ENSP00000388869;ENSP00000487560;ENSP00000501504;ENSP00000501530;ENSP00000501426;ENSP00000387868;ENSP00000413649;ENSP00000412707;ENSP00000371939;ENSP00000409667;ENSP00000349903;ENSP00000371931" "O43426" "SYNJ1" "8867" "synaptojanin 1" "INPP5G;PARK20" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000159131" "ENST00000381815;ENST00000381831;ENST00000381839;ENST00000424203;ENST00000482663;ENST00000487155;ENST00000460305;ENST00000467575;ENST00000361093;ENST00000366093;ENST00000466882;ENST00000497313;ENST00000430874;ENST00000426819;ENST00000476524;ENST00000488791;ENST00000438059;ENST00000441403" "ENSP00000371236;ENSP00000371253;ENSP00000371261;ENSP00000390003;ENSP00000354388;ENSP00000409771;ENSP00000413040;ENSP00000398631;ENSP00000413803;ENSP00000407783" "P22102" "GART" "2618" "phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase" "GARS-AIRS-GART;PGFT;PRGS" "Mitochondria;Cytosol" "CellAtlas"
@@ -1995,7 +1979,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000164951" "ENST00000523021;ENST00000297598;ENST00000520614;ENST00000520728;ENST00000518107;ENST00000518573;ENST00000517764;ENST00000518827;ENST00000521144;ENST00000396200" "ENSP00000297598;ENSP00000430931;ENSP00000428317;ENSP00000430366;ENSP00000428433;ENSP00000430380;ENSP00000430655;ENSP00000429492;ENSP00000379503" "Q9P0J1" "PDP1" "54704" "pyruvate dehyrogenase phosphatase catalytic subunit 1" "PDH;PDP;PPM2A;PPM2C" "Mitochondria;Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000164978" "ENST00000346365;ENST00000379155;ENST00000618590;ENST00000379158" "ENSP00000344187;ENSP00000368452;ENSP00000482384;ENSP00000368455" "P50583" "NUDT2" "318" "nudix hydrolase 2" "APAH1" "Nucleus" "CellAtlas"
"ENSG00000165029" "ENST00000374736;ENST00000678995;ENST00000494467;ENST00000423487;ENST00000374733" "ENSP00000363868;ENSP00000504612;ENSP00000416623;ENSP00000363865" "O95477" "ABCA1" "19" "ATP binding cassette subfamily A member 1" "ABC1;HDLDT1;TGD" "Nucleus" "CellAtlas"
-"ENSG00000165059" "ENST00000377276" "ENSP00000366488" "P22612" "PRKACG" "5568" "protein kinase cAMP-activated catalytic subunit gamma" "PKACg" "Cytosol" "CellAtlas"
"ENSG00000165060" "ENST00000644653;ENST00000484259;ENST00000396366;ENST00000377270;ENST00000498653" "ENSP00000495217;ENSP00000419243;ENSP00000379652;ENSP00000366482;ENSP00000418015" "Q16595" "FXN" "2395" "frataxin" "CyaY;FA;FARR;FRDA;X25" "Mitochondria;Cytosol" "SwissProt;CellAtlas"
"ENSG00000165078" "ENST00000639508;ENST00000638254;ENST00000297770;ENST00000479862;ENST00000639116;ENST00000518549" "ENSP00000491129;ENSP00000297770;ENSP00000419016" "Q8N4T0" "CPA6" "57094" "carboxypeptidase A6" "CPAH" "Extracellular" "DeepLoc2"
"ENSG00000165092" "ENST00000297785;ENST00000376939;ENST00000482210;ENST00000419959;ENST00000446946;ENST00000493113;ENST00000493311" "ENSP00000297785;ENSP00000366138;ENSP00000388026;ENSP00000401361" "P00352" "ALDH1A1" "216" "aldehyde dehydrogenase 1 family member A1" "ALDH1;PUMB1;RALDH1" "Cytosol" "SwissProt;CellAtlas"
@@ -2060,7 +2043,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000166800" "ENST00000615355;ENST00000396213;ENST00000280706" "ENSP00000478764;ENSP00000379516;ENSP00000280706" "Q6ZMR3" "LDHAL6A" "160287" "lactate dehydrogenase A like 6A" "LDH6A;MGC23940" "Cytosol" "DeepLoc2"
"ENSG00000166816" "ENST00000300051;ENST00000450168;ENST00000569876;ENST00000568164" "ENSP00000300051;ENSP00000417011;ENSP00000454260" "Q86WU2" "LDHD" "197257" "lactate dehydrogenase D" "" "Mitochondria;Cytosol" "SwissProt;CellAtlas"
"ENSG00000166819" "ENST00000560330;ENST00000300055;ENST00000430628;ENST00000531697" "ENSP00000453426;ENSP00000300055;ENSP00000402167" "O60240" "PLIN1" "5346" "perilipin 1" "PLIN" "Endoplasmic reticulum;Peroxisome" "SwissProt;CellAtlas"
-"ENSG00000166821" "ENST00000557982;ENST00000561224;ENST00000300056;ENST00000561257;ENST00000559170" "ENSP00000453552;ENSP00000300056;ENSP00000453492;ENSP00000453878" "O75192" "PEX11A" "8800" "peroxisomal biogenesis factor 11 alpha" "MGC119947;MGC138534;PEX11-ALPHA" "Peroxisome" "SwissProt"
"ENSG00000166825" "ENST00000679248;ENST00000300060;ENST00000560137;ENST00000559874;ENST00000558740;ENST00000559761;ENST00000558177;ENST00000560030;ENST00000559887;ENST00000560028" "ENSP00000502886;ENSP00000300060;ENSP00000453413;ENSP00000452934;ENSP00000453545;ENSP00000453405" "P15144" "ANPEP" "290" "alanyl aminopeptidase, membrane" "CD13;gp150;LAP1;p150;PEPN" "Cell membrane" "DeepLoc2"
"ENSG00000166840" "ENST00000534674;ENST00000524629;ENST00000525608;ENST00000526351;ENST00000317391;ENST00000533864;ENST00000534612;ENST00000524403;ENST00000532726;ENST00000527708;ENST00000300079;ENST00000530774;ENST00000534241;ENST00000530240;ENST00000531245;ENST00000524881;ENST00000534119;ENST00000534063;ENST00000612196" "ENSP00000433716;ENSP00000434652;ENSP00000322223;ENSP00000431640;ENSP00000436116;ENSP00000434757;ENSP00000300079;ENSP00000434661;ENSP00000437155;ENSP00000432225;ENSP00000479741" "Q969I3" "GLYATL1" "92292" "glycine-N-acyltransferase like 1" "FLJ34646;MGC15397" "Cytosol;Golgi apparatus" "CellAtlas"
"ENSG00000166908" "ENST00000422156;ENST00000354947;ENST00000540759;ENST00000551772;ENST00000550465;ENST00000550360;ENST00000550095;ENST00000548264" "ENSP00000412035;ENSP00000347032;ENSP00000439878;ENSP00000450197;ENSP00000447390;ENSP00000449335;ENSP00000448042;ENSP00000449538" "Q8TBX8" "PIP4K2C" "79837" "phosphatidylinositol-5-phosphate 4-kinase type 2 gamma" "FLJ22055;PIP5K2C" "Endoplasmic reticulum;Nucleus;Cytosol" "SwissProt;CellAtlas"
@@ -2104,7 +2086,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000167748" "ENST00000301420;ENST00000593325;ENST00000593859;ENST00000596300" "ENSP00000301420;ENSP00000472939" "P06870" "KLK1" "3816" "kallikrein 1" "Klk6" "Extracellular" "DeepLoc2"
"ENSG00000167751" "ENST00000593493;ENST00000595375;ENST00000597509;ENST00000596950;ENST00000325321;ENST00000600690;ENST00000599280;ENST00000594174;ENST00000597727;ENST00000595316;ENST00000599121;ENST00000600755;ENST00000600866;ENST00000358049;ENST00000597439;ENST00000601743;ENST00000599568;ENST00000595173;ENST00000601114;ENST00000595050;ENST00000597911;ENST00000597461;ENST00000391810" "ENSP00000472852;ENSP00000313581;ENSP00000469318;ENSP00000472095;ENSP00000471014;ENSP00000469770;ENSP00000472499;ENSP00000350748;ENSP00000471214;ENSP00000471323;ENSP00000471725;ENSP00000471321;ENSP00000375686" "P20151" "KLK2" "3817" "kallikrein related peptidase 2" "" "Extracellular" "DeepLoc2"
"ENSG00000167769" "ENST00000301452" "ENSP00000301452" "Q8TDN7" "ACER1" "125981" "alkaline ceramidase 1" "ASAH3" "Endoplasmic reticulum" "SwissProt"
-"ENSG00000167772" "ENST00000601886;ENST00000599192;ENST00000597137;ENST00000601770;ENST00000301455;ENST00000595079;ENST00000598255;ENST00000594348;ENST00000393962;ENST00000593998;ENST00000594875" "ENSP00000470307;ENSP00000473090;ENSP00000471345;ENSP00000301455;ENSP00000473025;ENSP00000377534;ENSP00000472551;ENSP00000472869" "Q9BY76" "ANGPTL4" "51129" "angiopoietin like 4" "ARP4;FIAF;HFARP;NL2;PGAR;pp1158" "Nucleus" "CellAtlas"
"ENSG00000167780" "ENST00000551896;ENST00000301466;ENST00000542365" "ENSP00000450120;ENSP00000301466;ENSP00000442234" "O75908" "SOAT2" "8435" "sterol O-acyltransferase 2" "ACAT2" "Endoplasmic reticulum" "SwissProt"
"ENSG00000167792" "ENST00000647561;ENST00000532303;ENST00000532244;ENST00000528328;ENST00000322776;ENST00000529927;ENST00000524876;ENST00000524838;ENST00000532343;ENST00000415352;ENST00000528548;ENST00000532260;ENST00000530014;ENST00000530103;ENST00000525086;ENST00000534139;ENST00000533075;ENST00000529867;ENST00000526138;ENST00000530638;ENST00000528314;ENST00000528377;ENST00000526770;ENST00000526169;ENST00000533919;ENST00000527355;ENST00000527923;ENST00000531250;ENST00000534352" "ENSP00000497587;ENSP00000432015;ENSP00000435202;ENSP00000436906;ENSP00000322450;ENSP00000436766;ENSP00000431751;ENSP00000395368;ENSP00000434575;ENSP00000437267;ENSP00000434438;ENSP00000436936;ENSP00000434581;ENSP00000435199;ENSP00000432637" "P49821" "NDUFV1" "4723" "NADH:ubiquinone oxidoreductase core subunit V1" "CI-51K" "Cytosol;Inner mitochondria" "SwissProt;CellAtlas"
"ENSG00000167815" "ENST00000334482;ENST00000466174;ENST00000301522;ENST00000498785;ENST00000478908;ENST00000477555" "ENSP00000334063;ENSP00000301522" "P32119" "PRDX2" "7001" "peroxiredoxin 2" "MGC4104;NKEFB;PRP;PRX2;PRXII;TDPX1;TSA" "Cytosol" "SwissProt"
@@ -2138,7 +2119,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000168653" "ENST00000372967;ENST00000372969" "ENSP00000362058;ENSP00000362060" "O43920" "NDUFS5" "4725" "NADH:ubiquinone oxidoreductase subunit S5" "CI-15k" "Inner mitochondria" "SwissProt"
"ENSG00000168671" "ENST00000282507;ENST00000513300;ENST00000504685;ENST00000504954;ENST00000515131" "ENSP00000282507;ENSP00000427404;ENSP00000426017;ENSP00000420865" "Q3SY77" "UGT3A2" "167127" "UDP glycosyltransferase family 3 member A2" "" "Cytosol;Golgi apparatus;Nucleus" "CellAtlas"
"ENSG00000168679" "ENST00000437429;ENST00000541986;ENST00000369779;ENST00000472422;ENST00000369781;ENST00000461647;ENST00000528649;ENST00000492412;ENST00000467986;ENST00000497687" "ENSP00000394790;ENSP00000446087;ENSP00000358794;ENSP00000432495;ENSP00000358796;ENSP00000432190;ENSP00000434136;ENSP00000433463;ENSP00000435768" "O15374" "SLC16A4" "9122" "solute carrier family 16 member 4" "MCT4;MCT5" "Cytosol" "CellAtlas"
-"ENSG00000168710" "ENST00000369799;ENST00000475081;ENST00000359172;ENST00000481423;ENST00000469401;ENST00000393614" "ENSP00000358814;ENSP00000352092;ENSP00000377238" "O43865" "AHCYL1" "10768" "adenosylhomocysteinase like 1" "IRBIT;PPP1R78;XPVKONA" "Endoplasmic reticulum;Cytosol" "SwissProt;CellAtlas"
"ENSG00000168748" "ENST00000338437;ENST00000548332;ENST00000394069" "ENSP00000345659;ENSP00000447178;ENSP00000377632" "P43166" "CA7" "766" "carbonic anhydrase 7" "" "Cytosol" "SwissProt"
"ENSG00000168765" "ENST00000369836;ENST00000464733;ENST00000461767;ENST00000479578;ENST00000326729;ENST00000495742;ENST00000369833;ENST00000485640;ENST00000336075;ENST00000638994;ENST00000478397;ENST00000493171;ENST00000493395" "ENSP00000358851;ENSP00000316471;ENSP00000358848;ENSP00000336744;ENSP00000491134" "Q03013" "GSTM4" "2948" "glutathione S-transferase mu 4" "" "Cytosol" "SwissProt;CellAtlas"
"ENSG00000168781" "ENST00000348806;ENST00000381885;ENST00000396923;ENST00000360135;ENST00000360301;ENST00000334933;ENST00000420765;ENST00000381879;ENST00000644537;ENST00000488490;ENST00000439195;ENST00000437065;ENST00000432870;ENST00000462136;ENST00000488768;ENST00000469229;ENST00000465123;ENST00000427877;ENST00000476294;ENST00000472547;ENST00000453080;ENST00000429176;ENST00000417085;ENST00000431962" "ENSP00000308773;ENSP00000371309;ENSP00000380129;ENSP00000353253;ENSP00000353446;ENSP00000334779;ENSP00000400887;ENSP00000371303;ENSP00000496290;ENSP00000387999;ENSP00000410563;ENSP00000415349;ENSP00000407704;ENSP00000405106;ENSP00000390657;ENSP00000405200" "Q6PFW1" "PPIP5K1" "9677" "diphosphoinositol pentakisphosphate kinase 1" "HISPPD2A;IPS1;KIAA0377;VIP1" "Cytosol" "SwissProt;CellAtlas"
@@ -2158,7 +2138,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000169255" "ENST00000392781;ENST00000320474;ENST00000392779;ENST00000651430;ENST00000650695;ENST00000651801;ENST00000651379;ENST00000652111;ENST00000651460;ENST00000651686;ENST00000651972;ENST00000651953;ENST00000651292;ENST00000651380;ENST00000651689;ENST00000652059;ENST00000652730;ENST00000651791;ENST00000651117;ENST00000651254;ENST00000651178;ENST00000651916;ENST00000651282;ENST00000652377;ENST00000652143;ENST00000650733;ENST00000417187;ENST00000652134;ENST00000652593;ENST00000496295;ENST00000473285;ENST00000651509;ENST00000651305;ENST00000652669;ENST00000652596;ENST00000651147;ENST00000651422;ENST00000494818;ENST00000476999;ENST00000494173;ENST00000652032;ENST00000488170;ENST00000652309;ENST00000468268;ENST00000492353;ENST00000473142;ENST00000498216;ENST00000484127;ENST00000460353;ENST00000478383;ENST00000497487" "ENSP00000376532;ENSP00000323479;ENSP00000376530;ENSP00000499079;ENSP00000498902;ENSP00000498243;ENSP00000498978;ENSP00000498689;ENSP00000498369;ENSP00000498346;ENSP00000498907;ENSP00000498633;ENSP00000498542;ENSP00000499072;ENSP00000499010;ENSP00000498743;ENSP00000498660;ENSP00000499180;ENSP00000498854;ENSP00000498553;ENSP00000498982;ENSP00000498487;ENSP00000498435;ENSP00000498481;ENSP00000498655;ENSP00000499186;ENSP00000407027;ENSP00000498331;ENSP00000418226;ENSP00000499003;ENSP00000498427;ENSP00000498696;ENSP00000498810;ENSP00000498478;ENSP00000498378;ENSP00000498840;ENSP00000419127;ENSP00000498901;ENSP00000420163;ENSP00000498765;ENSP00000419476;ENSP00000418567;ENSP00000420604;ENSP00000417643;ENSP00000420059;ENSP00000417053" "O75752" "B3GALNT1" "8706" "beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)" "B3GALT3;beta3Gal-T3;galT3;GLOB;P1" "Golgi apparatus" "SwissProt"
"ENSG00000169299" "ENST00000381967;ENST00000515668;ENST00000505986;ENST00000512556;ENST00000510084;ENST00000625312" "ENSP00000371393;ENSP00000426738;ENSP00000423269;ENSP00000425733;ENSP00000422785;ENSP00000485904" "Q96G03" "PGM2" "55276" "phosphoglucomutase 2" "FLJ10983" "Cytosol" "SwissProt"
"ENSG00000169359" "ENST00000643144;ENST00000359479;ENST00000468581;ENST00000646424;ENST00000644094;ENST00000642438;ENST00000644855;ENST00000475842;ENST00000496772;ENST00000460729" "ENSP00000496241;ENSP00000352456;ENSP00000418847;ENSP00000494846;ENSP00000494476;ENSP00000495971;ENSP00000493564;ENSP00000419066;ENSP00000419165" "O00400" "SLC33A1" "9197" "solute carrier family 33 member 1" "ACATN;AT-1;AT1;SPG42" "Endoplasmic reticulum;Cytosol" "SwissProt;CellAtlas"
-"ENSG00000169375" "ENST00000394947;ENST00000360439;ENST00000394949;ENST00000566640;ENST00000570124;ENST00000570021;ENST00000564778;ENST00000562776;ENST00000568431;ENST00000567289;ENST00000570115;ENST00000568309;ENST00000568190;ENST00000568919;ENST00000565264" "ENSP00000378402;ENSP00000353622;ENSP00000378403;ENSP00000455204;ENSP00000455072;ENSP00000454750;ENSP00000455834;ENSP00000455662;ENSP00000455644;ENSP00000456997;ENSP00000454296" "Q96ST3" "SIN3A" "25942" "SIN3 transcription regulator family member A" "DKFZP434K2235;KIAA0700" "Nucleus" "SwissProt;CellAtlas"
"ENSG00000169418" "ENST00000368680;ENST00000413826;ENST00000368677" "ENSP00000357669" "P16066" "NPR1" "4881" "natriuretic peptide receptor 1" "ANPa;ANPRA;GUCY2A;NPRA" "Nucleus" "CellAtlas"
"ENSG00000169660" "ENST00000337014;ENST00000644886;ENST00000327949;ENST00000583978;ENST00000580235;ENST00000578775;ENST00000582315;ENST00000577944;ENST00000581482;ENST00000644009;ENST00000578632;ENST00000582429;ENST00000578130;ENST00000585077;ENST00000578616;ENST00000583354;ENST00000582131" "ENSP00000337854;ENSP00000332634;ENSP00000462856;ENSP00000462303;ENSP00000462923;ENSP00000463129;ENSP00000464497;ENSP00000496193;ENSP00000463625;ENSP00000464912;ENSP00000462000;ENSP00000463241;ENSP00000465465" "Q8WVB3" "HEXD" "284004" "hexosaminidase D" "FLJ23825;HEXDC" "Nucleus;Mitochondria;Cytosol" "SwissProt;CellAtlas"
"ENSG00000169692" "ENST00000371694;ENST00000371696;ENST00000538402;ENST00000472820;ENST00000470861" "ENSP00000360759;ENSP00000360761;ENSP00000438919" "O15120" "AGPAT2" "10555" "1-acylglycerol-3-phosphate O-acyltransferase 2" "BSCL;LPAAT-beta" "Endoplasmic reticulum" "SwissProt"
@@ -2187,7 +2166,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000170430" "ENST00000482653;ENST00000651593;ENST00000482547;ENST00000462672;ENST00000306010" "ENSP00000498729;ENSP00000302111" "P16455" "MGMT" "4255" "O-6-methylguanine-DNA methyltransferase" "" "Nucleus" "SwissProt;CellAtlas"
"ENSG00000170445" "ENST00000675898;ENST00000675355;ENST00000675967;ENST00000675763;ENST00000675698;ENST00000676327;ENST00000675094;ENST00000506579;ENST00000675851;ENST00000675366;ENST00000674523;ENST00000431330;ENST00000457527;ENST00000675827;ENST00000504156;ENST00000504366;ENST00000307633;ENST00000509087;ENST00000438307;ENST00000645491;ENST00000512396;ENST00000675204;ENST00000646229;ENST00000643686;ENST00000507746;ENST00000415192;ENST00000518126;ENST00000502888;ENST00000674721;ENST00000674819" "ENSP00000501581;ENSP00000502594;ENSP00000502624;ENSP00000501747;ENSP00000501816;ENSP00000393244;ENSP00000387893;ENSP00000501900;ENSP00000425634;ENSP00000304668;ENSP00000502781;ENSP00000411511;ENSP00000494297;ENSP00000421576;ENSP00000501643;ENSP00000495358;ENSP00000493611;ENSP00000425889;ENSP00000411085" "P12081" "HARS1" "3035" "histidyl-tRNA synthetase 1" "HARS;HisRS;USH3B" "Cytosol" "SwissProt;CellAtlas"
"ENSG00000170482" "ENST00000353963;ENST00000348729;ENST00000504513;ENST00000506512;ENST00000503919;ENST00000502863;ENST00000508270" "ENSP00000302851;ENSP00000302701;ENSP00000422688;ENSP00000427271" "Q9UHI7" "SLC23A1" "9963" "solute carrier family 23 member 1" "SLC23A2;SVCT1;YSPL3" "Cell membrane;Lysosome" "DeepLoc2"
-"ENSG00000170485" "ENST00000335681;ENST00000427413;ENST00000486017;ENST00000448812;ENST00000451740;ENST00000492373;ENST00000474550;ENST00000471974;ENST00000450763;ENST00000433408;ENST00000495559;ENST00000490052" "ENSP00000338283;ENSP00000397595;ENSP00000388528;ENSP00000395265;ENSP00000392125;ENSP00000393396" "Q99743" "NPAS2" "4862" "neuronal PAS domain protein 2" "bHLHe9;MOP4;PASD4" "Nucleus" "SwissProt;CellAtlas"
"ENSG00000170502" "ENST00000302174;ENST00000512216;ENST00000514345;ENST00000473942;ENST00000514227;ENST00000440591;ENST00000502933;ENST00000515371" "ENSP00000303575;ENSP00000424702;ENSP00000421811;ENSP00000410270;ENSP00000422232" "Q9BW91" "NUDT9" "53343" "nudix hydrolase 9" "MGC3037" "Mitochondria;Nucleus" "CellAtlas"
"ENSG00000170516" "ENST00000396533;ENST00000355591;ENST00000505102;ENST00000543208" "ENSP00000379784;ENSP00000347799;ENSP00000423519;ENSP00000437439" "Q8TF08" "COX7B2" "170712" "cytochrome c oxidase subunit 7B2" "" "Mitochondria" "DeepLoc2"
"ENSG00000170522" "ENST00000302274;ENST00000394607;ENST00000514184;ENST00000507451;ENST00000506625;ENST00000506461;ENST00000503885;ENST00000513003" "ENSP00000304736;ENSP00000378105;ENSP00000424023;ENSP00000425488;ENSP00000426086" "Q9H5J4" "ELOVL6" "79071" "ELOVL fatty acid elongase 6" "FLJ23378;LCE;MGC5487" "Endoplasmic reticulum" "SwissProt"
@@ -2223,7 +2201,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000171503" "ENST00000512251;ENST00000682345;ENST00000436096;ENST00000684296;ENST00000682734;ENST00000682601;ENST00000684622;ENST00000684552;ENST00000683483;ENST00000684641;ENST00000682456;ENST00000684675;ENST00000684627;ENST00000683478;ENST00000511912;ENST00000683079;ENST00000684505;ENST00000683305;ENST00000684036;ENST00000683751;ENST00000507475;ENST00000510353;ENST00000683004;ENST00000684611;ENST00000683448;ENST00000684129;ENST00000683750;ENST00000307738;ENST00000682409;ENST00000683081;ENST00000506422;ENST00000682452;ENST00000682820;ENST00000683799;ENST00000684749;ENST00000682178;ENST00000682910;ENST00000681978;ENST00000684209;ENST00000514148;ENST00000683123;ENST00000682613;ENST00000682566;ENST00000683181;ENST00000683209;ENST00000683622" "ENSP00000508122;ENSP00000507740;ENSP00000507860;ENSP00000507546;ENSP00000506899;ENSP00000507719;ENSP00000507642;ENSP00000508240;ENSP00000506934;ENSP00000507471;ENSP00000507793;ENSP00000426638;ENSP00000507296;ENSP00000508237;ENSP00000508043;ENSP00000507276;ENSP00000506944;ENSP00000506936;ENSP00000506931;ENSP00000507174;ENSP00000303552;ENSP00000507722" "Q16134" "ETFDH" "2110" "electron transfer flavoprotein dehydrogenase" "ETFQO" "Inner mitochondria" "SwissProt"
"ENSG00000171560" "ENST00000651975;ENST00000403106;ENST00000622532" "ENSP00000498441;ENSP00000385981;ENSP00000478487" "P02671" "FGA" "2243" "fibrinogen alpha chain" "" "Endoplasmic reticulum" "CellAtlas"
"ENSG00000171608" "ENST00000377346;ENST00000484851;ENST00000361110;ENST00000481137;ENST00000479223;ENST00000536656;ENST00000628140;ENST00000543390" "ENSP00000366563;ENSP00000354410;ENSP00000446444;ENSP00000486826;ENSP00000443811" "O00329" "PIK3CD" "5293" "phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta" "p110D" "Cytosol" "SwissProt"
-"ENSG00000171720" "ENST00000469550;ENST00000305264;ENST00000469207;ENST00000459727;ENST00000491581;ENST00000486618;ENST00000467533;ENST00000492407;ENST00000475549;ENST00000523088;ENST00000519474;ENST00000476739;ENST00000495485;ENST00000490808;ENST00000471968;ENST00000492506" "ENSP00000302967;ENSP00000429099;ENSP00000430782" "O15379" "HDAC3" "8841" "histone deacetylase 3" "HD3;KDAC3;RPD3;RPD3-2" "Golgi apparatus;Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000171723" "ENST00000315266;ENST00000478722;ENST00000459628;ENST00000543237;ENST00000555668;ENST00000556633;ENST00000557654;ENST00000553936;ENST00000556020;ENST00000544752;ENST00000555456;ENST00000556501;ENST00000555527;ENST00000555503;ENST00000557678;ENST00000556240" "ENSP00000312771;ENSP00000417901;ENSP00000452220;ENSP00000438404;ENSP00000451935;ENSP00000451056;ENSP00000451790;ENSP00000451725;ENSP00000450706;ENSP00000452009;ENSP00000450442" "Q9NQX3" "GPHN" "10243" "gephyrin" "KIAA1385" "Cytosol" "SwissProt;CellAtlas"
"ENSG00000171759" "ENST00000553106;ENST00000307000;ENST00000551114;ENST00000635528;ENST00000635477;ENST00000549247;ENST00000549111;ENST00000551988;ENST00000550978;ENST00000551337;ENST00000548928;ENST00000546844;ENST00000548677;ENST00000635500;ENST00000547319;ENST00000546708;ENST00000552251;ENST00000550405" "ENSP00000448059;ENSP00000303500;ENSP00000489230;ENSP00000489016;ENSP00000447620;ENSP00000446658" "P00439" "PAH" "5053" "phenylalanine hydroxylase" "PH" "Endoplasmic reticulum" "CellAtlas"
"ENSG00000171766" "ENST00000396659;ENST00000558362;ENST00000676090;ENST00000675323;ENST00000675158;ENST00000675974;ENST00000674905;ENST00000675701;ENST00000558336;ENST00000561376;ENST00000558916;ENST00000558163;ENST00000558537;ENST00000561148;ENST00000559885;ENST00000558118;ENST00000560538;ENST00000458245;ENST00000527933" "ENSP00000379895;ENSP00000501630;ENSP00000502445;ENSP00000501737;ENSP00000502176;ENSP00000502671;ENSP00000454008;ENSP00000453781;ENSP00000453151;ENSP00000453860;ENSP00000453087;ENSP00000452971" "P50440" "GATM" "2628" "glycine amidinotransferase" "AGAT" "Cytosol;Inner mitochondria" "SwissProt;CellAtlas"
@@ -2257,7 +2234,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000172482" "ENST00000307503;ENST00000472436;ENST00000476698;ENST00000470255" "ENSP00000302620" "P21549" "AGXT" "189" "alanine--glyoxylate and serine--pyruvate aminotransferase" "AGT;AGT1;AGXT1;PH1;SPAT;SPT" "Peroxisome" "SwissProt"
"ENSG00000172497" "ENST00000307624;ENST00000508234;ENST00000506440;ENST00000513751" "ENSP00000303246;ENSP00000421628" "Q8WYK0" "ACOT12" "134526" "acyl-CoA thioesterase 12" "Cach;STARD15;THEAL" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000172508" "ENST00000525907;ENST00000529925;ENST00000531040;ENST00000531958;ENST00000307823;ENST00000445895;ENST00000531388" "ENSP00000431670;ENSP00000308268;ENSP00000389009" "A5YM72" "CARNS1" "57571" "carnosine synthase 1" "ATPGD1;KIAA1394" "Cytosol" "DeepLoc2"
-"ENSG00000172531" "ENST00000537694;ENST00000312989;ENST00000376745;ENST00000677322;ENST00000677343;ENST00000532446;ENST00000679175;ENST00000527663;ENST00000532279;ENST00000526510;ENST00000358239;ENST00000529724;ENST00000546202;ENST00000542876" "ENSP00000326031;ENSP00000365936;ENSP00000503926;ENSP00000431146;ENSP00000350974" "P62136" "PPP1CA" "5499" "protein phosphatase 1 catalytic subunit alpha" "PP-1A;PP1A;PP1alpha;PPP1A" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000172543" "ENST00000528419;ENST00000307886;ENST00000526034;ENST00000679584;ENST00000681512;ENST00000680443;ENST00000680670;ENST00000524681" "ENSP00000436568;ENSP00000311300;ENSP00000434267;ENSP00000505022;ENSP00000505903;ENSP00000505179;ENSP00000504913" "P56202" "CTSW" "1521" "cathepsin W" "" "Endoplasmic reticulum" "SwissProt"
"ENSG00000172572" "ENST00000359062;ENST00000542675;ENST00000544307" "ENSP00000351957" "Q14432" "PDE3A" "5139" "phosphodiesterase 3A" "CGI-PDE" "Cytosol" "SwissProt"
"ENSG00000172613" "ENST00000622583;ENST00000621995;ENST00000543808;ENST00000544620;ENST00000538013;ENST00000542139;ENST00000541132;ENST00000307980;ENST00000530934;ENST00000529100;ENST00000535644" "ENSP00000478994;ENSP00000444979;ENSP00000442064;ENSP00000445137;ENSP00000311360" "Q99638" "RAD9A" "5883" "RAD9 checkpoint clamp component A" "RAD9" "Nucleus" "SwissProt;CellAtlas"
@@ -2376,7 +2352,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000177414" "ENST00000371077;ENST00000611228;ENST00000371076;ENST00000608020;ENST00000464349;ENST00000608956" "ENSP00000360117;ENSP00000481174;ENSP00000360116;ENSP00000477356;ENSP00000476556" "Q5VVX9" "UBE2U" "148581" "ubiquitin conjugating enzyme E2 U" "MGC35130" "Cytosol" "DeepLoc2"
"ENSG00000177465" "ENST00000326303" "ENSP00000323071" "Q8N9L9" "ACOT4" "122970" "acyl-CoA thioesterase 4" "FLJ31235;PTE-Ib;PTE2B" "Peroxisome" "SwissProt"
"ENSG00000177542" "ENST00000320230;ENST00000628067;ENST00000531214;ENST00000481290;ENST00000627843;ENST00000630809;ENST00000531437;ENST00000625419;ENST00000532484;ENST00000528606;ENST00000529351;ENST00000533385;ENST00000531534;ENST00000531514;ENST00000527723;ENST00000526152;ENST00000527734;ENST00000625752;ENST00000456706;ENST00000528936;ENST00000524891;ENST00000629634;ENST00000625316;ENST00000529066;ENST00000532361;ENST00000527127;ENST00000525010;ENST00000532459;ENST00000525644;ENST00000629602;ENST00000530360" "ENSP00000322020;ENSP00000486058;ENSP00000437236;ENSP00000431829;ENSP00000486512;ENSP00000435862;ENSP00000485719;ENSP00000431466;ENSP00000437045;ENSP00000432222;ENSP00000434287;ENSP00000435402;ENSP00000433780;ENSP00000434479;ENSP00000436745;ENSP00000433655;ENSP00000487237;ENSP00000392749;ENSP00000432817;ENSP00000486434;ENSP00000433028;ENSP00000434850" "Q9H936" "SLC25A22" "79751" "solute carrier family 25 member 22" "EIEE3;FLJ13044;GC1;NET44" "Nucleus;Inner mitochondria" "SwissProt;CellAtlas"
-"ENSG00000177565" "ENST00000636864;ENST00000430069;ENST00000637659;ENST00000474363;ENST00000673974;ENST00000631253;ENST00000457928;ENST00000352800;ENST00000422442;ENST00000626758;ENST00000638074;ENST00000636348;ENST00000635757;ENST00000637681;ENST00000428970;ENST00000424913;ENST00000437738;ENST00000431421;ENST00000635794;ENST00000630796;ENST00000450267;ENST00000630833;ENST00000431674;ENST00000422066;ENST00000443315;ENST00000627825;ENST00000427349;ENST00000413084;ENST00000637137;ENST00000491623;ENST00000637544;ENST00000636478;ENST00000637755;ENST00000636187;ENST00000636912;ENST00000637123" "ENSP00000405574;ENSP00000490514;ENSP00000501274;ENSP00000486324;ENSP00000413251;ENSP00000263964;ENSP00000387849;ENSP00000486622;ENSP00000391559;ENSP00000404863;ENSP00000392180;ENSP00000402402;ENSP00000490246;ENSP00000486235;ENSP00000406297;ENSP00000486082;ENSP00000397450;ENSP00000398477;ENSP00000396120;ENSP00000401044;ENSP00000415506" "Q9BZK7" "TBL1XR1" "79718" "TBL1X receptor 1" "C21;DC42;FLJ12894;IRA1;TBLR1" "Nucleus" "SwissProt;CellAtlas"
"ENSG00000177628" "ENST00000368373;ENST00000327247;ENST00000464536;ENST00000427500;ENST00000428024;ENST00000478472;ENST00000484489;ENST00000491081;ENST00000497670;ENST00000460156;ENST00000493842;ENST00000473570;ENST00000467918;ENST00000470104" "ENSP00000357357;ENSP00000314508;ENSP00000402577;ENSP00000397986" "P04062" "GBA" "2629" "glucosylceramidase beta" "GBA1;GLUC" "Lysosome" "SwissProt"
"ENSG00000177646" "ENST00000505602;ENST00000679613;ENST00000681367;ENST00000681583;ENST00000514643;ENST00000681784;ENST00000681319;ENST00000681585;ENST00000511325;ENST00000680636;ENST00000512801;ENST00000308982;ENST00000505192;ENST00000511227;ENST00000681552;ENST00000679399;ENST00000515429;ENST00000514336;ENST00000679990;ENST00000681886;ENST00000679431;ENST00000680764;ENST00000505867;ENST00000681589;ENST00000680744;ENST00000679824;ENST00000679715;ENST00000511526;ENST00000508971;ENST00000680638" "ENSP00000504971;ENSP00000505309;ENSP00000506340;ENSP00000422020;ENSP00000506316;ENSP00000504886;ENSP00000427283;ENSP00000312618;ENSP00000426277;ENSP00000425226;ENSP00000505699;ENSP00000505434;ENSP00000426189;ENSP00000423758;ENSP00000506500;ENSP00000506440;ENSP00000505126;ENSP00000425346;ENSP00000505243;ENSP00000505516;ENSP00000506228;ENSP00000422683" "Q9H845" "ACAD9" "28976" "acyl-CoA dehydrogenase family member 9" "MGC14452;NPD002" "Inner mitochondria" "SwissProt;CellAtlas"
"ENSG00000177666" "ENST00000336615;ENST00000525250;ENST00000534561;ENST00000531923;ENST00000529255;ENST00000526083" "ENSP00000337701" "Q96AD5" "PNPLA2" "57104" "patatin like phospholipase domain containing 2" "ATGL;desnutrin;FP17548;iPLA2zeta;TTS-2.2" "Nucleus;Cytosol" "SwissProt;CellAtlas"
@@ -2414,6 +2389,7 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000179958" "ENST00000319285;ENST00000678016;ENST00000567983;ENST00000568434;ENST00000568973;ENST00000565758" "ENSP00000322524;ENSP00000503857;ENSP00000456612;ENSP00000455391;ENSP00000460764;ENSP00000460933" "Q9H773" "DCTPP1" "79077" "dCTP pyrophosphatase 1" "CDA03;MGC5627;RS21C6;XTP3TPA" "Mitochondria;Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000180011" "ENST00000322342;ENST00000537114;ENST00000582437;ENST00000581620" "ENSP00000323678;ENSP00000440111;ENSP00000463106;ENSP00000463844" "Q8N4Q0" "ZADH2" "284273" "zinc binding alcohol dehydrogenase domain containing 2" "MGC45594" "Golgi apparatus;Nucleus" "CellAtlas"
"ENSG00000180176" "ENST00000381178;ENST00000381175;ENST00000352909;ENST00000324155;ENST00000479437;ENST00000416223;ENST00000412076;ENST00000461172;ENST00000381168;ENST00000469226;ENST00000333684" "ENSP00000370571;ENSP00000370567;ENSP00000325951;ENSP00000325831;ENSP00000403440;ENSP00000403546;ENSP00000370560;ENSP00000328814" "P07101" "TH" "7054" "tyrosine hydroxylase" "DYT5b" "Nucleus;Cytosol" "SwissProt;CellAtlas"
+"ENSG00000180185" "ENST00000427358;ENST00000382666;ENST00000382668" "ENSP00000398053;ENSP00000372112;ENSP00000372114" "Q6P587" "FAHD1" "81889" "fumarylacetoacetate hydrolase domain containing 1" "DKFZP566J2046" "Cytosol;Mitochondria" ""
"ENSG00000180210" "ENST00000311907;ENST00000469189;ENST00000530231;ENST00000442468;ENST00000490274" "ENSP00000308541;ENSP00000433907;ENSP00000387413" "P00734" "F2" "2147" "coagulation factor II, thrombin" "" "Extracellular" "DeepLoc2"
"ENSG00000180233" "ENST00000323037;ENST00000459998" "ENSP00000323879" "Q8NHG8" "ZNRF2" "223082" "zinc and ring finger 2" "RNF202" "Nucleus;Lysosome" "SwissProt;CellAtlas"
"ENSG00000180251" "ENST00000295269;ENST00000492154" "ENSP00000295269" "Q6AI14" "SLC9A4" "389015" "solute carrier family 9 member A4" "NHE4" "Nucleus" "CellAtlas"
@@ -2544,10 +2520,8 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000186198" "ENST00000334287" "ENSP00000335292" "Q86UW2" "SLC51B" "123264" "solute carrier family 51 subunit beta" "OSTbeta" "Mitochondria" "CellAtlas"
"ENSG00000186204" "ENST00000550308;ENST00000547332;ENST00000547471;ENST00000451750;ENST00000430608;ENST00000548237;ENST00000518629;ENST00000548501;ENST00000549622;ENST00000548435;ENST00000546792;ENST00000550264;ENST00000517734;ENST00000551607;ENST00000324632;ENST00000550627;ENST00000546608" "ENSP00000448998;ENSP00000448560;ENSP00000446812;ENSP00000449703;ENSP00000430849;ENSP00000447922;ENSP00000321821" "Q9HCS2" "CYP4F12" "66002" "cytochrome P450 family 4 subfamily F member 12" "" "Endoplasmic reticulum" "SwissProt"
"ENSG00000186281" "ENST00000486463;ENST00000359548;ENST00000434632;ENST00000453542;ENST00000484440;ENST00000471757;ENST00000482704;ENST00000439254;ENST00000468438;ENST00000488515" "ENSP00000352547;ENSP00000389395;ENSP00000393770;ENSP00000401334" "Q6NUI2" "GPAT2" "150763" "glycerol-3-phosphate acyltransferase 2, mitochondrial" "CT123" "Mitochondria" "CellAtlas"
-"ENSG00000186298" "ENST00000335007;ENST00000340766;ENST00000550261;ENST00000546904;ENST00000551582;ENST00000553024;ENST00000546933;ENST00000550991;ENST00000551676;ENST00000620030;ENST00000551690" "ENSP00000335084;ENSP00000341779;ENSP00000447528;ENSP00000447090;ENSP00000447122;ENSP00000448981;ENSP00000448437;ENSP00000482210" "P36873" "PPP1CC" "5501" "protein phosphatase 1 catalytic subunit gamma" "PP1C;PP1gamma" "Mitochondria;Cytosol;Nucleus" "SwissProt"
"ENSG00000186334" "ENST00000335230;ENST00000423071;ENST00000377713" "ENSP00000334750;ENSP00000366942" "Q495N2" "SLC36A3" "285641" "solute carrier family 36 member 3" "PAT3;TRAMD2;tramdorin2" "Cell membrane;Lysosome" "DeepLoc2"
"ENSG00000186335" "ENST00000335244;ENST00000518617;ENST00000518280;ENST00000521967;ENST00000523044;ENST00000522829" "ENSP00000334223;ENSP00000430149;ENSP00000428453;ENSP00000430535;ENSP00000428634" "Q495M3" "SLC36A2" "153201" "solute carrier family 36 member 2" "PAT2;TRAMD1;tramdorin" "Endoplasmic reticulum" "SwissProt"
-"ENSG00000186350" "ENST00000484822;ENST00000481739;ENST00000356384;ENST00000672570;ENST00000649020" "ENSP00000419692;ENSP00000500402;ENSP00000497073" "P19793" "RXRA" "6256" "retinoid X receptor alpha" "NR2B1" "Golgi apparatus;Mitochondria;Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000186377" "ENST00000371901;ENST00000466294" "ENSP00000360968" "Q8N118" "CYP4X1" "260293" "cytochrome P450 family 4 subfamily X member 1" "MGC40051" "Endoplasmic reticulum" "DeepLoc2"
"ENSG00000186526" "ENST00000617645;ENST00000441682;ENST00000325723;ENST00000590209;ENST00000622291;ENST00000612078;ENST00000587680;ENST00000589927;ENST00000585349;ENST00000590745;ENST00000589778;ENST00000589722" "ENSP00000478555;ENSP00000479430;ENSP00000477567;ENSP00000482692" "P98187" "CYP4F8" "11283" "cytochrome P450 family 4 subfamily F member 8" "" "Endoplasmic reticulum" "SwissProt"
"ENSG00000186529" "ENST00000592279;ENST00000586182;ENST00000591058;ENST00000221307;ENST00000587360;ENST00000585846;ENST00000609670;ENST00000592424;ENST00000588886" "ENSP00000466395;ENSP00000466988;ENSP00000221307;ENSP00000465394;ENSP00000468105;ENSP00000476546" "Q08477" "CYP4F3" "4051" "cytochrome P450 family 4 subfamily F member 3" "CYP4F;LTB4H" "Endoplasmic reticulum" "SwissProt"
@@ -2555,7 +2529,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000186642" "ENST00000334456;ENST00000376450;ENST00000539367;ENST00000544570;ENST00000418754;ENST00000540345;ENST00000536918;ENST00000420501;ENST00000544239;ENST00000441209;ENST00000542223;ENST00000475807;ENST00000538299;ENST00000536308;ENST00000543750;ENST00000543575;ENST00000490749;ENST00000541998;ENST00000538749;ENST00000537631;ENST00000540380;ENST00000485058;ENST00000535701;ENST00000542969;ENST00000546038;ENST00000536458;ENST00000444035" "ENSP00000334910;ENSP00000365633;ENSP00000445443;ENSP00000442256;ENSP00000410310;ENSP00000446399;ENSP00000388997;ENSP00000392457;ENSP00000440834;ENSP00000439077;ENSP00000441322;ENSP00000438559;ENSP00000438008;ENSP00000442797;ENSP00000438868;ENSP00000439683;ENSP00000443737;ENSP00000439302;ENSP00000443232;ENSP00000438295;ENSP00000445750;ENSP00000411657" "O00408" "PDE2A" "5138" "phosphodiesterase 2A" "" "Mitochondria;Cytosol;Inner mitochondria" "SwissProt;CellAtlas"
"ENSG00000186792" "ENST00000359051;ENST00000621157;ENST00000336307;ENST00000415204;ENST00000450982;ENST00000513170;ENST00000435141" "ENSP00000351946;ENSP00000479935;ENSP00000337425;ENSP00000401092;ENSP00000391922;ENSP00000424633;ENSP00000391663" "O43820" "HYAL3" "8372" "hyaluronidase 3" "LUCA-3;LUCA14;Minna14" "Cytosol;Lysosome;Endoplasmic reticulum" "SwissProt"
"ENSG00000186908" "ENST00000426126;ENST00000546778;ENST00000552453;ENST00000547620;ENST00000550876;ENST00000551407;ENST00000547604;ENST00000550163;ENST00000549682;ENST00000549944;ENST00000549010;ENST00000550789;ENST00000552693;ENST00000553091;ENST00000550244;ENST00000547673" "ENSP00000403397;ENSP00000447871;ENSP00000449551;ENSP00000446954;ENSP00000449734;ENSP00000447934;ENSP00000449728;ENSP00000449836;ENSP00000450295;ENSP00000448757" "Q8IUH5" "ZDHHC17" "23390" "zinc finger DHHC-type palmitoyltransferase 17" "HIP14;HYPH;KIAA0946" "Golgi apparatus;Cytosol" "SwissProt;CellAtlas"
-"ENSG00000186951" "ENST00000440343;ENST00000415785;ENST00000420804;ENST00000460086;ENST00000407236;ENST00000496865;ENST00000624793;ENST00000484619;ENST00000481567;ENST00000402126;ENST00000493286;ENST00000262735" "ENSP00000397291;ENSP00000411677;ENSP00000414752;ENSP00000385523;ENSP00000385246;ENSP00000262735" "Q07869" "PPARA" "5465" "peroxisome proliferator activated receptor alpha" "hPPAR;NR1C1;PPAR" "Nucleus" "SwissProt;CellAtlas"
"ENSG00000187021" "ENST00000525157;ENST00000530626;ENST00000484402;ENST00000470678;ENST00000531984;ENST00000482159;ENST00000529584;ENST00000531825;ENST00000526223;ENST00000525820;ENST00000358834;ENST00000528052;ENST00000497792;ENST00000530319;ENST00000527980;ENST00000480870;ENST00000471549;ENST00000534537;ENST00000510125;ENST00000482833;ENST00000534513" "ENSP00000436123;ENSP00000351695;ENSP00000433933;ENSP00000431406;ENSP00000437263;ENSP00000433785;ENSP00000431207;ENSP00000434159;ENSP00000434549" "P54315" "PNLIPRP1" "5407" "pancreatic lipase related protein 1" "PLRP1" "Extracellular" "DeepLoc2"
"ENSG00000187024" "ENST00000641641;ENST00000335223;ENST00000423807;ENST00000419060;ENST00000543175;ENST00000456267;ENST00000414832;ENST00000416214;ENST00000429848" "ENSP00000492921;ENSP00000493136;ENSP00000418219;ENSP00000418661;ENSP00000439469;ENSP00000485347;ENSP00000485479;ENSP00000485367" "Q86Y79" "PTRH1" "138428" "peptidyl-tRNA hydrolase 1 homolog" "C9orf115;PTH1" "Mitochondria" "DeepLoc2"
"ENSG00000187048" "ENST00000310638;ENST00000475477;ENST00000462347;ENST00000474458;ENST00000468629;ENST00000465874;ENST00000371905;ENST00000496519;ENST00000371904" "ENSP00000311095;ENSP00000476854;ENSP00000477495;ENSP00000476988;ENSP00000476619;ENSP00000476368;ENSP00000360972;ENSP00000360971" "Q02928" "CYP4A11" "1579" "cytochrome P450 family 4 subfamily A member 11" "CYP4A2;CYP4AII" "Endoplasmic reticulum" "SwissProt"
@@ -2606,7 +2579,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000196433" "ENST00000381241;ENST00000381229;ENST00000381233;ENST00000509780;ENST00000432523" "ENSP00000370639;ENSP00000370627;ENSP00000370631;ENSP00000392053" "P46597" "ASMT" "438" "acetylserotonin O-methyltransferase" "ASMTY;HIOMT;HIOMTY" "Cytosol" "DeepLoc2"
"ENSG00000196470" "ENST00000565620;ENST00000568007;ENST00000380006;ENST00000356721;ENST00000394725;ENST00000563745;ENST00000573005;ENST00000567973" "ENSP00000456421;ENSP00000369343;ENSP00000349156;ENSP00000378214;ENSP00000457415" "Q8IUQ4" "SIAH1" "6477" "siah E3 ubiquitin protein ligase 1" "hSIAH1" "Nucleus;Mitochondria;Cytosol" "SwissProt;CellAtlas"
"ENSG00000196475" "ENST00000358842" "ENSP00000351706" "Q14410" "GK2" "2712" "glycerol kinase 2" "GKP2;GKTA" "Cytosol" "SwissProt"
-"ENSG00000196498" "ENST00000405201;ENST00000404621;ENST00000429285;ENST00000418829;ENST00000443451;ENST00000413172;ENST00000464377;ENST00000440337;ENST00000461081;ENST00000474079;ENST00000440187;ENST00000453428;ENST00000458234;ENST00000473999;ENST00000536195;ENST00000493859;ENST00000448614;ENST00000420698;ENST00000494460;ENST00000542927;ENST00000448008;ENST00000542565;ENST00000404121;ENST00000356219" "ENSP00000384018;ENSP00000384202;ENSP00000400281;ENSP00000391389;ENSP00000407357;ENSP00000398963;ENSP00000396044;ENSP00000400687;ENSP00000402808;ENSP00000408247;ENSP00000405367;ENSP00000443689;ENSP00000403034;ENSP00000385618;ENSP00000348551" "Q9Y618" "NCOR2" "9612" "nuclear receptor corepressor 2" "CTG26;SMRT;SMRTE;TNRC14;TRAC-1" "Nucleus" "SwissProt;CellAtlas"
"ENSG00000196502" "ENST00000395609;ENST00000569554;ENST00000350842;ENST00000564818;ENST00000567998;ENST00000562058;ENST00000314752;ENST00000563493;ENST00000566189;ENST00000567512" "ENSP00000457912;ENSP00000329399;ENSP00000454388;ENSP00000456215;ENSP00000321988;ENSP00000457083;ENSP00000456459;ENSP00000455979" "P50225" "SULT1A1" "6817" "sulfotransferase family 1A member 1" "P-PST;STP;STP1" "Cytosol" "SwissProt"
"ENSG00000196511" "ENST00000482940;ENST00000360057;ENST00000538212;ENST00000378098;ENST00000547966;ENST00000551062;ENST00000548831;ENST00000552881;ENST00000481645;ENST00000489798;ENST00000546806;ENST00000548460;ENST00000378099;ENST00000639328" "ENSP00000449909;ENSP00000353165;ENSP00000438813;ENSP00000367338;ENSP00000448655;ENSP00000450028;ENSP00000367339;ENSP00000491869" "Q9H3S4" "TPK1" "27010" "thiamin pyrophosphokinase 1" "HTPK1;PP20" "Cytosol" "DeepLoc2"
"ENSG00000196517" "ENST00000372307;ENST00000372306;ENST00000372310;ENST00000673836;ENST00000475075;ENST00000357730;ENST00000360584;ENST00000492434;ENST00000528803;ENST00000489764;ENST00000466926;ENST00000533007" "ENSP00000361381;ENSP00000361380;ENSP00000361384;ENSP00000501314;ENSP00000434460;ENSP00000350362;ENSP00000353791;ENSP00000435652;ENSP00000433241" "P48067" "SLC6A9" "6536" "solute carrier family 6 member 9" "GLYT1" "Golgi apparatus;Nucleus" "CellAtlas"
@@ -2681,7 +2653,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000198488" "ENST00000528622;ENST00000622824" "ENSP00000435628;ENSP00000484640" "Q6ZMB0" "B3GNT6" "192134" "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6" "B3Gn-T6" "Golgi apparatus" "SwissProt"
"ENSG00000198569" "ENST00000673865;ENST00000538474;ENST00000673835;ENST00000673953;ENST00000361134" "ENSP00000501101;ENSP00000442397;ENSP00000501114;ENSP00000501108;ENSP00000355353" "Q8N130" "SLC34A3" "142680" "solute carrier family 34 member 3" "FLJ38680;NPTIIc" "Cell membrane;Lysosome" "DeepLoc2"
"ENSG00000198610" "ENST00000469875;ENST00000380448;ENST00000263126" "ENSP00000369814;ENSP00000263126" "P17516" "AKR1C4" "1109" "aldo-keto reductase family 1 member C4" "3-alpha-HSD;C11;CDR;CHDR;DD4;HAKRA;MGC22581" "Endoplasmic reticulum;Nucleus;Cytosol" "SwissProt;CellAtlas"
-"ENSG00000198646" "ENST00000626057;ENST00000434040;ENST00000593786;ENST00000628752;ENST00000374796;ENST00000359003;ENST00000471897;ENST00000612493;ENST00000616167" "ENSP00000486894;ENSP00000363929;ENSP00000351894;ENSP00000481177;ENSP00000481935" "Q14686" "NCOA6" "23054" "nuclear receptor coactivator 6" "AIB3;ASC2;KIAA0181;NRC;PRIP;RAP250;TRBP" "Nucleus" "SwissProt;CellAtlas"
"ENSG00000198650" "ENST00000355962;ENST00000564007;ENST00000566094;ENST00000566010" "ENSP00000348234" "P17735" "TAT" "6898" "tyrosine aminotransferase" "" "Cytosol" "DeepLoc2"
"ENSG00000198668" "ENST00000557020;ENST00000447653;ENST00000356978;ENST00000555132;ENST00000557123;ENST00000556757;ENST00000553995;ENST00000553630;ENST00000553542;ENST00000659177;ENST00000553964;ENST00000544280;ENST00000663135;ENST00000555267;ENST00000553422;ENST00000554296;ENST00000556721;ENST00000626705" "ENSP00000451062;ENSP00000403491;ENSP00000349467;ENSP00000451646;ENSP00000450829;ENSP00000499421;ENSP00000442853;ENSP00000499498;ENSP00000450425;ENSP00000486402" "P0DP23" "CALM1" "801" "calmodulin 1" "CALML2;CAMI;DD132;PHKD" "Cytosol" "SwissProt;CellAtlas"
"ENSG00000198682" "ENST00000361175;ENST00000456849;ENST00000465996;ENST00000482258" "ENSP00000354436;ENSP00000406157" "O95340" "PAPSS2" "9060" "3'-phosphoadenosine 5'-phosphosulfate synthase 2" "ATPSK2" "Mitochondria" "CellAtlas"
@@ -2760,7 +2731,6 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000213398" "ENST00000264005;ENST00000573538;ENST00000570369;ENST00000570980;ENST00000575467;ENST00000576450;ENST00000570396;ENST00000573846;ENST00000575277" "ENSP00000264005;ENSP00000463220;ENSP00000459014;ENSP00000464651;ENSP00000460653;ENSP00000458141;ENSP00000459291" "P04180" "LCAT" "3931" "lecithin-cholesterol acyltransferase" "" "Nucleus" "CellAtlas"
"ENSG00000213614" "ENST00000268097;ENST00000683243;ENST00000684263;ENST00000683853;ENST00000682235;ENST00000682064;ENST00000684667;ENST00000683133;ENST00000684305;ENST00000682461;ENST00000682843;ENST00000683579;ENST00000682721;ENST00000684203;ENST00000683735;ENST00000684602;ENST00000684231;ENST00000683548;ENST00000683463;ENST00000683587;ENST00000684125;ENST00000682653;ENST00000565873;ENST00000564677;ENST00000567411;ENST00000683681;ENST00000566304;ENST00000683860;ENST00000569116;ENST00000567027;ENST00000684415;ENST00000684520;ENST00000682657;ENST00000682061;ENST00000682177;ENST00000683884;ENST00000568777;ENST00000683003;ENST00000567159;ENST00000684041;ENST00000563762;ENST00000566672;ENST00000569410;ENST00000683742;ENST00000683228;ENST00000563908;ENST00000569509;ENST00000568260;ENST00000567213" "ENSP00000268097;ENSP00000507042;ENSP00000508369;ENSP00000506834;ENSP00000507003;ENSP00000508108;ENSP00000506819;ENSP00000507308;ENSP00000508173;ENSP00000506867;ENSP00000507535;ENSP00000508336;ENSP00000507996;ENSP00000507748;ENSP00000507986;ENSP00000507320;ENSP00000455545;ENSP00000508110;ENSP00000455114;ENSP00000507179;ENSP00000457521;ENSP00000507227;ENSP00000506826;ENSP00000507753;ENSP00000508316;ENSP00000507409;ENSP00000507004;ENSP00000507576;ENSP00000456489;ENSP00000508382;ENSP00000456346;ENSP00000457037;ENSP00000457125;ENSP00000458128;ENSP00000478217" "P06865" "HEXA" "3073" "hexosaminidase subunit alpha" "" "Cytosol;Lysosome" "SwissProt;CellAtlas"
"ENSG00000213619" "ENST00000533507;ENST00000529276;ENST00000528192;ENST00000530295;ENST00000534208;ENST00000534716;ENST00000263774;ENST00000533105;ENST00000524568;ENST00000677462;ENST00000678975;ENST00000531351;ENST00000525378;ENST00000525212;ENST00000527178" "ENSP00000433753;ENSP00000432099;ENSP00000431588;ENSP00000433405;ENSP00000263774" "O75489" "NDUFS3" "4722" "NADH:ubiquinone oxidoreductase core subunit S3" "CI-30" "Nucleus;Inner mitochondria" "SwissProt;CellAtlas"
-"ENSG00000213639" "ENST00000455580;ENST00000420282;ENST00000441461;ENST00000427786;ENST00000296122;ENST00000395366;ENST00000464273;ENST00000418910;ENST00000358506" "ENSP00000390715;ENSP00000398839;ENSP00000414918;ENSP00000394589;ENSP00000296122;ENSP00000378769;ENSP00000388056;ENSP00000351298" "P62140" "PPP1CB" "5500" "protein phosphatase 1 catalytic subunit beta" "MP;PP-1B;PP1B;PP1beta;PP1c;PPP1beta" "Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000213648" "ENST00000360423;ENST00000569544;ENST00000565290;ENST00000563944;ENST00000562941" "ENSP00000353600;ENSP00000455063;ENSP00000456834;ENSP00000457597" "P0DMN0" "SULT1A4" "445329" "sulfotransferase family 1A member 4" "" "Cytosol" "SwissProt"
"ENSG00000213689" "ENST00000433541;ENST00000444177;ENST00000625293;ENST00000492235;ENST00000635452;ENST00000456089" "ENSP00000412404;ENSP00000415972;ENSP00000486676;ENSP00000494511;ENSP00000492023;ENSP00000411331" "Q9NSU2" "TREX1" "11277" "three prime repair exonuclease 1" "AGS1;DRN3" "Endoplasmic reticulum;Nucleus;Cytosol" "SwissProt;CellAtlas"
"ENSG00000213722" "ENST00000437288;ENST00000436437;ENST00000469963;ENST00000416410;ENST00000480913;ENST00000483792;ENST00000375787;ENST00000375792;ENST00000375789;ENST00000488119" "ENSP00000413164;ENSP00000395759;ENSP00000397466;ENSP00000364943;ENSP00000364949;ENSP00000364945" "O95865" "DDAH2" "23564" "dimethylarginine dimethylaminohydrolase 2" "G6A" "Mitochondria;Cytosol" "SwissProt;CellAtlas"
@@ -2895,3 +2865,22 @@ genes geneENSTID geneENSPID geneUniProtID geneSymbols geneEntrezID geneNames gen
"ENSG00000281500" "ENST00000525102;ENST00000330775;ENST00000357590;ENST00000538950;ENST00000545985;ENST00000526275;ENST00000532085;ENST00000650539;ENST00000527992;ENST00000638925;ENST00000638360;ENST00000638186;ENST00000530407;ENST00000524428;ENST00000525372;ENST00000525039;ENST00000529510;ENST00000532888;ENST00000526626;ENST00000525787;ENST00000534384" "ENSP00000476242;ENSP00000476176;ENSP00000475991;ENSP00000475241" "O43826" "SLC37A4" "" "Glucose-6-phosphate exchanger" "G6PT,G6PT1" "Endoplasmic reticulum" "SwissProt"
"ENSG00000288702" "ENST00000482026" "ENSP00000418532" "P35503" "UGT1A3" "54659" "UDP glucuronosyltransferase family 1 member A3" "UGT1C" "Endoplasmic reticulum" "SwissProt"
"ENSG00000288705" "ENST00000373414" "ENSP00000362513" "P35504" "UGT1A5" "54579" "UDP glucuronosyltransferase family 1 member A5" "UGT1E" "Endoplasmic reticulum" "SwissProt"
+"ENSG00000007314" "ENST00000435607" "ENSP00000396320" "P35499" "SCN4A" "6329" "sodium voltage-gated channel alpha subunit 4" "" "" ""
+"ENSG00000102452" "ENST00000675594;ENST00000497170;ENST00000675802;ENST00000251127;ENST00000376200;ENST00000467264;ENST00000676315;ENST00000648359;ENST00000675150;ENST00000675332" "ENSP00000502675;ENSP00000501603;ENSP00000365373;ENSP00000501955;ENSP00000502680;ENSP00000497465;ENSP00000501818;ENSP00000502490;ENSP00000251127;ENSP00000502148" "Q8IZF0" "NALCN" "259232" "sodium leak channel, non-selective" "" "" ""
+"ENSG00000136531" "ENST00000636769;ENST00000637367;ENST00000673831;ENST00000674133;ENST00000486878;ENST00000636071;ENST00000631182;ENST00000424833;ENST00000673883;ENST00000636135;ENST00000636384;ENST00000636662;ENST00000283256;ENST00000375437;ENST00000637266;ENST00000636985" "ENSP00000406454;ENSP00000490592;ENSP00000364586;ENSP00000490765;ENSP00000490107;ENSP00000501305;ENSP00000490849;ENSP00000501309;ENSP00000486885;ENSP00000489873;ENSP00000489821;ENSP00000283256;ENSP00000487466;ENSP00000490800;ENSP00000500975;ENSP00000490866" "Q99250" "SCN2A" "6326" "sodium voltage-gated channel alpha subunit 2" "" "" ""
+"ENSG00000136546" "ENST00000650747;ENST00000643258;ENST00000419992;ENST00000424326;ENST00000441411" "ENSP00000496114;ENSP00000498959;ENSP00000413699;ENSP00000403846;ENSP00000396600" "Q01118" "SCN7A" "6332" "sodium voltage-gated channel alpha subunit 7" "" "" ""
+"ENSG00000138622" "ENST00000261917" "ENSP00000261917" "Q9Y3Q4" "HCN4" "10021" "hyperpolarization activated cyclic nucleotide gated potassium channel 4" "" "" ""
+"ENSG00000144285" "ENST00000689288;ENST00000409050;ENST00000674923;ENST00000636759;ENST00000641603;ENST00000641996;ENST00000637988;ENST00000637285;ENST00000641575;ENST00000671940;ENST00000635750;ENST00000375405;ENST00000636194;ENST00000303395;ENST00000637038;ENST00000635776;ENST00000640036" "ENSP00000490612;ENSP00000490780;ENSP00000490895;ENSP00000492917;ENSP00000500336;ENSP00000303540;ENSP00000509637;ENSP00000490799;ENSP00000364554;ENSP00000493054;ENSP00000490692;ENSP00000492945;ENSP00000490288;ENSP00000501589;ENSP00000386312;ENSP00000491573;ENSP00000490184" "P35498" "SCN1A" "6323" "sodium voltage-gated channel alpha subunit 1" "" "" ""
+"ENSG00000162341" "ENST00000637342;ENST00000635811;ENST00000294309;ENST00000637504;ENST00000542467" "ENSP00000490341;ENSP00000294309;ENSP00000445551;ENSP00000490171;ENSP00000489759" "Q8NHX9" "TPCN2" "219931" "two pore segment channel 2" "" "" ""
+"ENSG00000164588" "ENST00000634658;ENST00000673735;ENST00000303230" "ENSP00000489134;ENSP00000501107;ENSP00000307342" "O60741" "HCN1" "348980" "hyperpolarization activated cyclic nucleotide gated potassium channel 1" "" "" ""
+"ENSG00000168356" "ENST00000675892;ENST00000675223;ENST00000444237;ENST00000676045;ENST00000456224;ENST00000676176;ENST00000675672;ENST00000668754;ENST00000302328" "ENSP00000502318;ENSP00000499569;ENSP00000408028;ENSP00000502481;ENSP00000502446;ENSP00000307599;ENSP00000416757;ENSP00000501891;ENSP00000501685" "Q9UI33" "SCN11A" "11280" "sodium voltage-gated channel alpha subunit 11" "" "" ""
+"ENSG00000169432" "ENST00000645907;ENST00000452182;ENST00000303354;ENST00000643319;ENST00000645283;ENST00000642356;ENST00000667991;ENST00000667201;ENST00000454569;ENST00000409672" "ENSP00000386306;ENSP00000495983;ENSP00000413212;ENSP00000496086;ENSP00000499663;ENSP00000304748;ENSP00000393141;ENSP00000499341;ENSP00000494071;ENSP00000495601" "Q15858" "SCN9A" "6335" "sodium voltage-gated channel alpha subunit 9" "" "" ""
+"ENSG00000183873" "ENST00000333535;ENST00000413689;ENST00000414099;ENST00000450102;ENST00000449557;ENST00000455624;ENST00000423572;ENST00000327956" "ENSP00000398266;ENSP00000413996;ENSP00000410257;ENSP00000399524;ENSP00000398962;ENSP00000333674;ENSP00000328968;ENSP00000403355" "Q14524" "SCN5A" "6331" "sodium voltage-gated channel alpha subunit 5" "" "" ""
+"ENSG00000185313" "ENST00000655275;ENST00000449082;ENST00000643924" "ENSP00000499510;ENSP00000495595;ENSP00000390600" "Q9Y5Y9" "SCN10A" "6336" "sodium voltage-gated channel alpha subunit 10" "" "" ""
+"ENSG00000186815" "ENST00000335509;ENST00000551099;ENST00000552642;ENST00000392569;ENST00000552985;ENST00000552542;ENST00000547955;ENST00000547275;ENST00000548465;ENST00000546781;ENST00000550873;ENST00000551096;ENST00000549279;ENST00000541517;ENST00000550785;ENST00000552897" "ENSP00000448010;ENSP00000448561;ENSP00000449560;ENSP00000447569;ENSP00000438125;ENSP00000335300;ENSP00000446767;ENSP00000448083;ENSP00000447181;ENSP00000447806;ENSP00000447263;ENSP00000448704;ENSP00000447073;ENSP00000449944;ENSP00000449564;ENSP00000376350" "Q9ULQ1" "TPCN1" "53373" "two pore segment channel 1" "" "" ""
+"ENSG00000196876" "ENST00000662684;ENST00000627620;ENST00000599343;ENST00000548086;ENST00000551216;ENST00000355133;ENST00000667214;ENST00000546961;ENST00000545061;ENST00000638820;ENST00000354534;ENST00000637709;ENST00000636945;ENST00000668547" "ENSP00000447567;ENSP00000499511;ENSP00000490470;ENSP00000492157;ENSP00000499724;ENSP00000486828;ENSP00000347255;ENSP00000476447;ENSP00000346534;ENSP00000487583;ENSP00000490580;ENSP00000440360;ENSP00000499691;ENSP00000499636" "Q9UQD0" "SCN8A" "6334" "sodium voltage-gated channel alpha subunit 8" "" "" ""
+"ENSG00000166828" "ENST00000300061" "ENSP00000300061" "P51170" "SCNN1G" "6340" "sodium channel epithelial 1 subunit gamma" "" "" ""
+"ENSG00000168447" "ENST00000343070;ENST00000307331;ENST00000568923;ENST00000568085;ENST00000566441" "ENSP00000345751;ENSP00000302874;ENSP00000456309;ENSP00000455673;ENSP00000482681" "P51168" "SCNN1B" "6338" "sodium channel epithelial 1 subunit beta" "" "" ""
+"ENSG00000111319" "ENST00000228916;ENST00000360168;ENST00000540037;ENST00000543768;ENST00000396966;ENST00000536788" "ENSP00000228916;ENSP00000353292;ENSP00000440876;ENSP00000438739;ENSP00000380166;ENSP00000443434" "P37088" "SCNN1A" "6337" "sodium channel epithelial 1 subunit alpha" "" "" ""
+"ENSG00000162572" "ENST00000379116;ENST00000338555;ENST00000400928;ENST00000325425;ENST00000379099;ENST00000470022" "ENSP00000368411;ENSP00000339504;ENSP00000383717;ENSP00000321594;ENSP00000368393;ENSP00000420548" "P51172" "SCNN1D" "6339" "sodium channel epithelial 1 subunit delta" "" "" ""
+"ENSG00000153253" "ENST00000283254;ENST00000706067;ENST00000639244;ENST00000409101;ENST00000668657;ENST00000440431;ENST00000453007" "ENSP00000283254;ENSP00000516211;ENSP00000492251;ENSP00000386726;ENSP00000499420;ENSP00000403348;ENSP00000391569" "Q9NY46" "SCN3A" "6328" "sodium voltage-gated channel alpha subunit 3" "" "" ""
diff --git a/model/metabolites.tsv b/model/metabolites.tsv
index 37c58096..906c34ee 100644
--- a/model/metabolites.tsv
+++ b/model/metabolites.tsv
@@ -75,8 +75,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00026m" "MAM00026" "" "" "" "" "" "" "CE6186" "" "CE6186" "MNXM33779" "m00026m" "m00026m"
"MAM00026x" "MAM00026" "" "" "" "" "" "" "CE6186" "" "CE6186" "MNXM33779" "m00026p" "m00026p"
"MAM00027x" "MAM00027" "" "" "" "" "53481494" "" "CE6191" "" "CE6191" "MNXM33780" "m00027p" "m00027p"
-"MAM00028c" "MAM00028" "" "" "" "CHEBI:81563" "16061126" "" "CE7090" "" "CE7090" "MNXM33782" "m00028c" "m00028c"
-"MAM00029c" "MAM00029" "" "" "" "CHEBI:81563" "16061126" "LMFA03070025" "CE7090" "" "CE7090" "MNXM33782" "m00029c" "m00029c"
+"MAM00028c" "MAM00028" "" "" "" "CHEBI:81563" "16061126" "" "CE7090" "" "CE7090" "MNXM33782" "m00028c" "m00028c;MAM00029c"
"MAM00030c" "MAM00030" "" "C19559" "" "CHEBI:82558" "" "" "" "" "M00030" "MNXM13488" "m00030c" "m00030c"
"MAM00031c" "MAM00031" "" "C14791" "" "CHEBI:33995" "" "" "" "" "M00031" "MNXM6499" "m00031c" "m00031c"
"MAM00032c" "MAM00032" "onpthl" "C14786" "" "CHEBI:33998" "108063" "" "" "" "onpthl" "MNXM12425;MNXM3390" "m00032c" "m00032c"
@@ -86,7 +85,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00035c" "MAM00035" "2425dhvitd3" "C07712" "" "CHEBI:28818" "" "LMST03020273" "" "" "2425dhvitd3" "MNXM6763" "m00035c" "m00035c"
"MAM00035m" "MAM00035" "2425dhvitd3" "C07712" "" "CHEBI:28818" "" "LMST03020273" "" "" "2425dhvitd3" "MNXM6763" "m00035m" "m00035m"
"MAM00035e" "MAM00035" "2425dhvitd3" "C07712" "" "CHEBI:28818" "" "LMST03020273" "" "" "2425dhvitd3" "MNXM6763" "m00035s" "m00035s"
-"MAM00036m" "MAM00036" "" "C05450" "" "CHEBI:52050" "46224537" "" "CE5168" "" "HC01459" "MNXM732;MNXM827" "m00036m" "m00036m"
"MAM00036x" "MAM00036" "" "C05450" "" "CHEBI:52050" "46224537" "" "CE5168" "" "HC01459" "MNXM732;MNXM827" "m00036p" "m00036p"
"MAM00037x" "MAM00037" "thcholoylcoa" "C05448" "" "CHEBI:27403" "46224536" "" "" "" "thcholoylcoa" "MNXM165175;MNXM3395;MNXM560" "m00037p" "m00037p"
"MAM00038c" "MAM00038" "" "C05754" "" "" "" "" "" "HC01597" "HC01597" "MNXM28221" "m00038c" "m00038c"
@@ -119,9 +117,9 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00054m" "MAM00054" "" "" "" "" "" "" "" "" "M00054" "" "m00054m" "m00054m"
"MAM00055c" "MAM00055" "" "" "" "" "" "" "" "" "M00055" "" "m00055c" "m00055c"
"MAM00056m" "MAM00056" "" "" "" "CHEBI:76292" "" "" "" "" "M00056" "MNXM170116" "m00056m" "m00056m"
-"MAM00057c" "MAM00057" "od2coa" "C16218" "HMDB0006529" "CHEBI:50570" "53477850" "LMFA07050055" "" "" "od2coa" "MNXM954" "m00057c" "m00057c"
-"MAM00057m" "MAM00057" "od2coa" "C16218" "HMDB0006529" "CHEBI:50570" "53477850" "LMFA07050055" "" "" "od2coa" "MNXM954" "m00057m" "m00057m"
-"MAM00057x" "MAM00057" "od2coa" "C16218" "HMDB0006529" "CHEBI:50570" "53477850" "LMFA07050055" "" "" "od2coa" "MNXM954" "m00057p" "m00057p"
+"MAM00057c" "MAM00057" "od2coa" "C16218" "HMDB0006529" "CHEBI:50570" "53477850" "LMFA07050385" "" "" "od2coa" "MNXM954" "m00057c" "m00057c"
+"MAM00057m" "MAM00057" "od2coa" "C16218" "HMDB0006529" "CHEBI:50570" "53477850" "LMFA07050385" "" "" "od2coa" "MNXM954" "m00057m" "m00057m"
+"MAM00057x" "MAM00057" "od2coa" "C16218" "HMDB0006529" "CHEBI:50570" "53477850" "LMFA07050385" "" "" "od2coa" "MNXM954" "m00057p" "m00057p"
"MAM00058c" "MAM00058" "" "C05751" "" "" "" "" "" "HC01594" "HC01594" "MNXM23766" "m00058c" "m00058c"
"MAM00059m" "MAM00059" "" "C05276" "" "CHEBI:27537" "46173358" "LMFA07050024" "" "HC01415" "HC01415" "MNXM784" "m00059m" "m00059m"
"MAM00059x" "MAM00059" "" "C05276" "" "CHEBI:27537" "46173358" "LMFA07050024" "" "HC01415" "HC01415" "MNXM784" "m00059p" "m00059p"
@@ -146,7 +144,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00074c" "MAM00074" "" "" "" "" "" "" "CE4835" "" "CE4835" "MNXM145822" "m00074c" "m00074c"
"MAM00075x" "MAM00075" "" "" "" "CHEBI:20067" "" "LMFA07050065" "CE5126" "" "CE5126" "MNXM108213;MNXM35866" "m00075p" "m00075p"
"MAM00076x" "MAM00076" "" "" "" "" "" "" "CE5936" "" "CE5936" "" "m00076p" "m00076p"
-"MAM00078x" "MAM00078" "pristcoa" "" "" "CHEBI:64039" "" "LMFA07050064" "CE5125" "" "CE5125" "MNXM30947" "m00078p" "m00078p"
+"MAM00078x" "MAM00078" "CE5125" "" "" "CHEBI:64039" "" "LMFA07050064" "CE5125" "" "CE5125" "MNXM30947" "m00078p" "m00078p"
"MAM00079x" "MAM00079" "" "" "" "" "53481417" "" "CE5941" "" "CE5941" "MNXM30996" "m00079p" "m00079p"
"MAM00080x" "MAM00080" "" "" "" "" "53481419" "" "CE5935" "" "CE5935" "MNXM30997" "m00080p" "m00080p"
"MAM00081m" "MAM00081" "" "" "" "" "53481423" "" "CE2418" "" "CE2418" "MNXM31113" "m00081m" "m00081m"
@@ -285,9 +283,9 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00129r" "MAM00129" "" "" "" "" "" "" "" "" "M00129" "" "m00129r" "m00129r"
"MAM00130c" "MAM00130" "tettet6crn" "" "" "" "" "" "" "" "tettet6crn" "MNXM9141" "m00130c" "m00130c"
"MAM00130r" "MAM00130" "tettet6crn" "" "" "" "" "" "" "" "tettet6crn" "MNXM9141" "m00130r" "m00130r"
-"MAM00131c" "MAM00131" "tettet6coa" "C16171" "HMDB0006516" "CHEBI:63548" "53477846" "LMFA07050041" "CE4837" "" "tettet6coa" "MNXM1512;MNXM5945" "m00131c" "m00131c"
+"MAM00131c" "MAM00131" "CE4837;tettet6coa" "C16171" "HMDB0006516" "CHEBI:63548" "53477846" "LMFA07050041" "CE4837" "" "CE4837;tettet6coa" "MNXM1512;MNXM5945;MNXM165171" "m00131c" "CE4837_c;m00131c;MAM03354c"
"MAM00131x" "MAM00131" "tettet6coa" "C16171" "HMDB0006516" "CHEBI:63548" "53477846" "LMFA07050041" "CE4837" "" "tettet6coa" "MNXM1512;MNXM5945" "m00131p" "m00131p"
-"MAM00131r" "MAM00131" "tettet6coa" "C16171" "HMDB0006516" "CHEBI:63548" "53477846" "LMFA07050041" "CE4837" "" "tettet6coa" "MNXM1512;MNXM5945" "m00131r" "m00131r"
+"MAM00131r" "MAM00131" "CE4837;tettet6coa" "C16171" "HMDB0006516" "CHEBI:63548" "53477846" "LMFA07050041" "CE4837" "" "CE4837;tettet6coa" "MNXM1512;MNXM5945;MNXM165171" "m00131r" "CE4837_r;m00131r;MAM03354r"
"MAM00132c" "MAM00132" "tettet6" "" "" "" "152972" "LMFA01030819" "" "" "tettet6" "MNXM12999" "m00132c" "m00132c"
"MAM00132l" "MAM00132" "tettet6" "" "" "" "152972" "LMFA01030819" "" "" "tettet6" "MNXM12999" "m00132l" "m00132l"
"MAM00132r" "MAM00132" "tettet6" "" "" "" "152972" "LMFA01030819" "" "" "tettet6" "MNXM12999" "m00132r" "m00132r"
@@ -513,7 +511,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00269l" "MAM00269" "10fthf7glu" "" "" "" "" "" "" "" "10fthf7glu" "MNXM5422" "m00269l" "m00269l"
"MAM00269m" "MAM00269" "10fthf7glu" "" "" "" "" "" "" "" "10fthf7glu" "MNXM5422" "m00269m" "m00269m"
"MAM00269e" "MAM00269" "10fthf7glu" "" "" "" "" "" "" "" "10fthf7glu" "MNXM5422" "m00269s" "m00269s"
-"MAM00270c" "MAM00270" "wharachd" "C14748" "" "CHEBI:34306" "5283157" "" "" "" "wharachd" "MNXM22451" "m00270c" "m00270c"
+"MAM00270c" "MAM00270" "wharachd" "C14748" "" "CHEBI:34306" "5283157" "" "" "HC02179" "wharachd" "MNXM22451;MNXM6760" "m00270c;m00591c" "m00270c;m00591c;MAM00591c"
"MAM00270r" "MAM00270" "wharachd" "C14748" "" "CHEBI:34306" "5283157" "" "" "" "wharachd" "MNXM22451" "m00270r" "m00270r"
"MAM00271c" "MAM00271" "" "" "" "" "" "" "CE6447" "" "CE6447" "MNXM163636" "m00271c" "m00271c"
"MAM00272c" "MAM00272" "" "" "" "" "" "" "CE6459" "" "CE6459" "MNXM164048" "m00272c" "m00272c"
@@ -879,8 +877,8 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00528c" "MAM00528" "mi34p" "C04063" "HMDB0006235" "CHEBI:28858" "440211" "" "" "" "mi34p" "MNXM163431;MNXM2768" "m00528c" "m00528c"
"MAM00529c" "MAM00529" "mi3p__D" "C04006" "" "CHEBI:18169" "440194" "" "" "" "mi3p_D" "MNXM540" "m00529c" "m00529c"
"MAM00530c" "MAM00530" "mi4p__D" "C03546" "" "CHEBI:18384" "" "" "" "" "mi4p_D" "MNXM2063" "m00530c" "m00530c"
-"MAM00531c" "MAM00531" "ppmi1346p" "C18058" "" "" "890" "" "" "" "ppmi1346p" "MNXM34087" "m00531c" "m00531c"
-"MAM00531n" "MAM00531" "ppmi1346p" "C18058" "" "" "890" "" "" "" "ppmi1346p" "MNXM34087" "m00531n" "m00531n"
+"MAM00531c" "MAM00531" "ppmi1346p" "C18058" "" "" "96024277" "" "" "" "ppmi1346p" "MNXM34087" "m00531c" "m00531c"
+"MAM00531n" "MAM00531" "ppmi1346p" "C18058" "" "" "96024277" "" "" "" "ppmi1346p" "MNXM34087" "m00531n" "m00531n"
"MAM00532c" "MAM00532" "" "" "" "" "" "LMGP10060005" "" "" "M00532" "MNXM116015" "m00532c" "m00532c"
"MAM00533c" "MAM00533" "" "" "" "" "" "" "CE6504" "" "CE6504" "MNXM164037" "m00533c" "m00533c"
"MAM00534c" "MAM00534" "" "" "" "" "53481443" "" "CE3481" "" "CE3481" "MNXM32836" "m00534c" "m00534c"
@@ -972,8 +970,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00588r" "MAM00588" "" "" "" "" "53481509" "" "CE2056" "" "CE2056" "MNXM35484" "m00588r" "m00588r"
"MAM00589c" "MAM00589" "" "" "" "" "" "" "CE6451" "" "CE6451" "MNXM163661" "m00589c" "m00589c"
"MAM00590c" "MAM00590" "" "" "" "" "" "" "CE5815" "" "CE5815" "MNXM164163" "m00590c" "m00590c"
-"MAM00591c" "MAM00591" "" "C14748" "" "CHEBI:34306" "" "" "" "HC02179" "" "MNXM6760" "m00591c" "m00591c"
-"MAM00591e" "MAM00591" "" "C14748" "" "CHEBI:34306" "" "" "" "HC02179" "" "MNXM6760" "m00591s" "m00591s"
"MAM00592c" "MAM00592" "20ahchsterol" "C05500" "HMDB0006283" "CHEBI:1296" "440711" "LMST01010201" "" "" "20ahchsterol" "MNXM164166;MNXM3824" "m00592c" "m00592c"
"MAM00592r" "MAM00592" "20ahchsterol" "C05500" "HMDB0006283" "CHEBI:1296" "440711" "LMST01010201" "" "" "20ahchsterol" "MNXM164166;MNXM3824" "m00592r" "m00592r"
"MAM00593c" "MAM00593" "" "" "" "" "" "" "CE6467" "" "CE6467" "MNXM166019" "m00593c" "m00593c"
@@ -1017,11 +1013,9 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00615c" "MAM00615" "" "" "" "" "" "" "" "" "M00615" "MNXM827" "m00615c" "m00615c"
"MAM00615x" "MAM00615" "" "" "" "" "" "" "" "" "M00615" "MNXM827" "m00615p" "m00615p"
"MAM00616c" "MAM00616" "cholcoar" "C15613" "" "CHEBI:37642" "15942889" "LMST01010218" "CE5165" "HC01348" "cholcoar" "MNXM549;MNXM90922;MNXM91096" "m00616c" "m00616c"
-"MAM00616m" "MAM00616" "cholcoar" "C15613" "" "CHEBI:37642" "15942889" "LMST01010218" "CE5165" "HC01348" "cholcoar" "MNXM549;MNXM90922;MNXM91096" "m00616m" "m00616m"
"MAM00616x" "MAM00616" "cholcoar" "C15613" "" "CHEBI:37642" "15942889" "LMST01010218" "CE5165" "HC01348" "cholcoar" "MNXM549;MNXM90922;MNXM91096" "m00616p" "m00616p"
"MAM00616r" "MAM00616" "cholcoar" "C15613" "" "CHEBI:37642" "15942889" "LMST01010218" "CE5165" "HC01348" "cholcoar" "MNXM549;MNXM90922;MNXM91096" "m00616r" "m00616r"
"MAM00617x" "MAM00617" "" "C17346" "" "" "" "" "" "" "M00617" "MNXM5367" "m00617p" "m00617p"
-"MAM00618m" "MAM00618" "cholcoas" "C17343" "" "CHEBI:37643" "15942888" "" "CE5166" "" "CE5166;cholcoas" "MNXM1201;MNXM8131" "m00618m" "m00618m"
"MAM00618x" "MAM00618" "cholcoas" "C17343" "" "CHEBI:37643" "15942888" "" "CE5166" "" "CE5166;cholcoas" "MNXM1201;MNXM8131" "m00618p" "m00618p"
"MAM00619r" "MAM00619" "xol25oh" "" "" "" "65094" "LMST01010018" "" "" "xol25oh" "MNXM852" "m00619r" "m00619r"
"MAM00620c" "MAM00620" "25hvitd2" "" "HMDB0001438" "" "22833566" "" "" "" "25hvitd2" "MNXM4976" "m00620c" "m00620c"
@@ -1125,7 +1119,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00682m" "MAM00682" "" "" "" "" "" "" "CE4795" "" "CE4795" "" "m00682m" "m00682m"
"MAM00682x" "MAM00682" "" "" "" "" "" "" "CE4795" "" "CE4795" "" "m00682p" "m00682p"
"MAM00683c" "MAM00683" "" "C11547" "" "" "" "" "" "" "M00683" "MNXM6083" "m00683c" "m00683c"
-"MAM00684c" "MAM00684" "" "C08276" "HMDB0001527" "CHEBI:1438" "563" "LMFA01130006" "" "" "M00684" "MNXM2782" "m00684c" "m00684c"
+"MAM00684c" "MAM00684" "" "C08276" "HMDB0001527" "CHEBI:1438" "563" "LMFA01130006" "" "" "M00684" "MNXM2782" "m00684c" "m00684c;MAM03325c"
"MAM00685x" "MAM00685" "" "" "" "" "" "" "CE5943" "" "CE5943" "" "m00685p" "m00685p"
"MAM00686x" "MAM00686" "" "" "" "" "" "" "CE5940" "" "CE5940" "" "m00686p" "m00686p"
"MAM00687m" "MAM00687" "" "" "" "" "" "" "CE5968" "" "CE5968" "MNXM161244" "m00687m" "m00687m"
@@ -1222,9 +1216,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00745r" "MAM00745" "" "C04483" "HMDB0000626" "CHEBI:28834" "222528" "LMST04010040" "" "" "dchac" "MNXM57907" "m00745r" "m00745r"
"MAM00746m" "MAM00746" "" "" "" "" "" "LMST04030155" "" "" "M00746" "MNXM30747;MNXM36899" "m00746m" "m00746m"
"MAM00747r" "MAM00747" "" "" "" "" "" "" "CE1274" "" "CE1274" "MNXM151029" "m00747r" "m00747r"
-"MAM00748m" "MAM00748" "cholcoaone" "C05467" "HMDB0006891" "CHEBI:27379" "440690" "LMST01010216" "CE5169" "HC01473" "cholcoaone" "MNXM162946;MNXM873" "m00748m" "m00748m"
-"MAM00748x" "MAM00748" "cholcoaone" "C05467" "HMDB0006891" "CHEBI:27379" "440690" "LMST01010216" "CE5169" "HC01473" "cholcoaone" "MNXM162946;MNXM873" "m00748p" "m00748p"
-"MAM00749m" "MAM00749" "cholcoads" "C05460" "HMDB0006889" "CHEBI:27505" "5280797" "LMST01010217" "" "HC01466" "cholcoads" "MNXM162945;MNXM2747" "m00749m" "m00749m"
+"MAM00748x" "MAM00748" "cholcoaone" "C05467" "HMDB0006891" "CHEBI:27379" "440690" "LMST01010216" "CE5169" "HC01473" "cholcoaone" "MNXM162946;MNXM873" "m00748p" "m00748p;MAM03368x"
"MAM00749x" "MAM00749" "cholcoads" "C05460" "HMDB0006889" "CHEBI:27505" "5280797" "LMST01010217" "" "HC01466" "cholcoads" "MNXM162945;MNXM2747" "m00749p" "m00749p"
"MAM00750c" "MAM00750" "thcholst" "C01301" "" "CHEBI:48940" "439479" "LMST04030164" "" "HC00757" "thcholst" "MNXM162326;MNXM163900;MNXM867;MNXM90392" "m00750c" "m00750c"
"MAM00750m" "MAM00750" "thcholst" "C01301" "" "CHEBI:48940" "439479" "LMST04030164" "" "HC00757" "thcholst" "MNXM162326;MNXM163900;MNXM867;MNXM90392" "m00750m" "m00750m"
@@ -1243,7 +1235,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00758m" "MAM00758" "dhcholestanate" "C04554" "HMDB0000359" "CHEBI:48467" "53477686" "LMST04030066" "" "HC01313" "dhcholestanate" "MNXM162671;MNXM688" "m00758m" "m00758m"
"MAM00758x" "MAM00758" "dhcholestanate" "C04554" "HMDB0000359" "CHEBI:48467" "53477686" "LMST04030066" "" "HC01313" "dhcholestanate" "MNXM162671;MNXM688" "m00758p" "m00758p"
"MAM00758r" "MAM00758" "dhcholestanate" "C04554" "HMDB0000359" "CHEBI:48467" "53477686" "LMST04030066" "" "HC01313" "dhcholestanate" "MNXM162671;MNXM688" "m00758r" "m00758r"
-"MAM00759c" "MAM00759" "" "C13712" "" "" "" "LMST02030130" "" "" "M00759" "MNXM3494" "m00759c" "m00759c"
"MAM00760c" "MAM00760" "" "C05665" "" "CHEBI:58374" "75" "" "" "" "bamppald" "MNXM43758" "m00760c" "m00760c"
"MAM00761m" "MAM00761" "" "" "" "" "3081084" "" "CE3038" "" "CE3038" "MNXM6853" "m00761m" "m00761m"
"MAM00762g" "MAM00762" "cs_hs_linkage" "C04903" "" "G00157" "" "" "" "" "cs_hs_linkage" "MNXM147451" "m00762g" "m00762g"
@@ -1278,7 +1269,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00783c" "MAM00783" "" "" "" "" "" "" "" "" "M00783" "MNXM1171" "m00783c" "m00783c"
"MAM00783x" "MAM00783" "" "" "" "" "" "" "" "" "M00783" "MNXM1171" "m00783p" "m00783p"
"MAM00784m" "MAM00784" "3hmp" "C06001" "HMDB0000023" "CHEBI:37373" "440873" "" "" "HC00705" "3hmp" "MNXM396" "m00784m" "m00784m"
-"MAM00785m" "MAM00785" "3hibutcoa" "C04047" "" "CHEBI:15481" "45259165" "" "" "HC01223" "HC01223" "MNXM1034;MNXM446" "m00785m" "m00785m"
+"MAM00785m" "MAM00785" "3hibutcoa" "C04047" "" "CHEBI:15481" "45259165" "" "" "HC01223" "3hibutcoa;HC01223" "MNXM1034;MNXM446" "m00785m" "3hibutcoa_m;m00785m;MAM03226m"
"MAM00786c" "MAM00786" "3hxkynam" "C05636" "" "" "440736" "" "" "" "3hxkynam" "MNXM36534" "m00786c" "m00786c"
"MAM00787c" "MAM00787" "" "" "" "" "" "" "CE2095" "" "CE2095" "MNXM163184" "m00787c" "m00787c"
"MAM00788c" "MAM00788" "hLkynr" "C03227" "HMDB0000732" "CHEBI:17380" "11811" "" "" "HC01079" "hLkynr" "MNXM576" "m00788c" "m00788c"
@@ -1430,21 +1421,20 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00890m" "MAM00890" "3ohodcoa" "C16216" "HMDB0006498" "CHEBI:50571" "22833663" "" "" "" "3ohodcoa" "MNXM513" "m00890m" "m00890m"
"MAM00890x" "MAM00890" "3ohodcoa" "C16216" "HMDB0006498" "CHEBI:50571" "22833663" "" "" "" "3ohodcoa" "MNXM513" "m00890p" "m00890p"
"MAM00891c" "MAM00891" "" "C05750" "" "" "" "" "" "HC01593" "HC01593" "MNXM28031" "m00891c" "m00891c"
-"MAM00892m" "MAM00892" "" "C05267" "" "CHEBI:28264" "11966162" "LMFA07050016" "" "HC01406" "HC01406" "MNXM706" "m00892m" "m00892m"
-"MAM00892x" "MAM00892" "" "C05267" "" "CHEBI:28264" "11966162" "LMFA07050016" "" "HC01406" "HC01406" "MNXM706" "m00892p" "m00892p"
+"MAM00892m" "MAM00892" "" "C05267" "" "CHEBI:28264" "11966162" "LMFA07050249" "" "HC01406" "HC01406" "MNXM706" "m00892m" "m00892m"
+"MAM00892x" "MAM00892" "" "C05267" "" "CHEBI:28264" "11966162" "LMFA07050249" "" "HC01406" "HC01406" "MNXM706" "m00892p" "m00892p"
"MAM00893m" "MAM00893" "" "" "" "" "" "" "CE5160" "HC10858" "HC10858" "MNXM150997" "m00893m" "m00893m"
"MAM00893x" "MAM00893" "" "" "" "" "" "" "CE5160" "HC10858" "HC10858" "MNXM150997" "m00893p" "m00893p"
"MAM00894m" "MAM00894" "" "" "" "" "440601" "" "CE0853" "HC10853" "CE0853;HC10853" "MNXM166250" "m00894m" "m00894m"
"MAM00894x" "MAM00894" "" "" "" "" "440601" "" "CE0853" "HC10853" "CE0853;HC10853" "MNXM166250" "m00894p" "m00894p"
-"MAM00895m" "MAM00895" "3ohdcoa" "C05259" "" "CHEBI:15491" "169621" "LMFA07050016" "" "HC01398" "3ohdcoa" "MNXM738" "m00895m" "m00895m"
-"MAM00895x" "MAM00895" "3ohdcoa" "C05259" "" "CHEBI:15491" "169621" "LMFA07050016" "" "HC01398" "3ohdcoa" "MNXM738" "m00895p" "m00895p"
+"MAM00895m" "MAM00895" "3ohdcoa" "C05259" "" "CHEBI:15491" "169621" "LMFA07050250" "" "HC01398" "3ohdcoa" "MNXM738" "m00895m" "m00895m"
+"MAM00895x" "MAM00895" "3ohdcoa" "C05259" "" "CHEBI:15491" "169621" "LMFA07050250" "" "HC01398" "3ohdcoa" "MNXM738" "m00895p" "m00895p"
"MAM00896c" "MAM00896" "" "" "" "" "" "" "" "" "M00896" "" "m00896c" "m00896c"
"MAM00897m" "MAM00897" "" "" "" "" "" "" "" "" "M00897" "" "m00897m" "m00897m"
"MAM00898c" "MAM00898" "" "" "" "" "" "" "" "" "M00898" "" "m00898c" "m00898c"
"MAM00899m" "MAM00899" "" "" "" "" "" "" "" "" "M00899" "MNXM10118" "m00899m" "m00899m"
"MAM00900m" "MAM00900" "msa" "C00222" "" "CHEBI:17960" "868" "" "" "HC00203" "msa" "MNXM244" "m00900m" "m00900m"
"MAM00901c" "MAM00901" "" "" "" "" "" "" "CE4851" "" "CE4851" "MNXM164265" "m00901c" "m00901c"
-"MAM00902c" "MAM00902" "" "" "" "" "" "" "CE4820" "" "CE4820" "MNXM164259" "m00902c" "m00902c"
"MAM00903c" "MAM00903" "" "" "" "" "" "" "CE4834" "" "CE4834" "MNXM164266" "m00903c" "m00903c"
"MAM00904c" "MAM00904" "" "" "" "" "25229583" "" "CE2253" "" "CE2253" "MNXM36773" "m00904c" "m00904c"
"MAM00904x" "MAM00904" "" "" "" "" "25229583" "" "CE2253" "" "CE2253" "MNXM36773" "m00904p" "m00904p"
@@ -1474,7 +1464,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00923c" "MAM00923" "cala" "C02642" "HMDB0000026" "CHEBI:18261" "111" "" "" "HC00975" "cala" "MNXM802" "m00923c" "m00923c"
"MAM00924c" "MAM00924" "42A3HP24DB" "C05645" "" "" "440741" "" "" "HC01547" "42A3HP24DB" "MNXM163203;MNXM4997" "m00924c" "m00924c"
"MAM00925c" "MAM00925" "" "" "" "" "10948689" "" "CE3086" "" "CE3086" "MNXM166294" "m00925c" "m00925c"
-"MAM00926c" "MAM00926" "4aphdob" "C01252" "HMDB0000978" "CHEBI:17442" "472" "" "" "" "4aphdob" "MNXM163204" "m00926c" "m00926c"
"MAM00927c" "MAM00927" "" "C19602" "" "" "" "" "" "" "M00927" "MNXM14691" "m00927c" "m00927c"
"MAM00928c" "MAM00928" "" "C19605" "" "" "" "" "" "" "M00928" "MNXM14692" "m00928c" "m00928c"
"MAM00929c" "MAM00929" "" "C19574" "" "" "" "" "" "" "M00929" "MNXM4356" "m00929c" "m00929c"
@@ -1482,7 +1471,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00931c" "MAM00931" "" "C19564" "" "" "" "" "" "" "M00931" "MNXM10159" "m00931c" "m00931c"
"MAM00932c" "MAM00932" "" "C16453" "" "" "" "" "" "" "M00932" "MNXM5537" "m00932c" "m00932c"
"MAM00932e" "MAM00932" "" "C16453" "" "" "" "" "" "" "M00932" "MNXM5537" "m00932s" "m00932s"
-"MAM00933c" "MAM00933" "dmnoncoa" "" "" "" "" "LMFA07050034" "CE4805" "" "CE4805" "MNXM37161" "m00933c" "m00933c"
+"MAM00933c" "MAM00933" "dmnoncoa" "" "" "" "" "LMFA07050034" "CE4805" "" "CE4805;dmnoncoa" "MNXM37161;MNXM6100" "m00933c" "dmnoncoa_c;m00933c;MAM03554c"
"MAM00933m" "MAM00933" "dmnoncoa" "" "" "" "" "LMFA07050034" "CE4805" "" "CE4805" "MNXM37161" "m00933m" "m00933m"
"MAM00933x" "MAM00933" "dmnoncoa" "" "" "" "" "LMFA07050034" "CE4805" "" "CE4805" "MNXM37161" "m00933p" "m00933p"
"MAM00934m" "MAM00934" "" "" "" "" "" "" "CE4806" "" "CE4806" "MNXM468808" "m00934m" "m00934m"
@@ -1710,8 +1699,8 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01087r" "MAM01087" "" "" "HMDB0002208" "" "6453659" "LMST04030177" "CE1273" "" "CE1273" "MNXM163691" "m01087r" "m01087r"
"MAM01088r" "MAM01088" "" "" "HMDB0002180" "" "5284194" "LMST04030016" "CE1278" "" "CE1278" "MNXM164360" "m01088r" "m01088r"
"MAM01089r" "MAM01089" "" "" "HMDB0000524" "" "53477712" "LMST04030031" "CE1272" "" "CE1272" "MNXM29720" "m01089r" "m01089r"
-"MAM01090c" "MAM01090" "xoltetrol" "C05446" "HMDB0001231" "CHEBI:17278" "193321" "LMST04030014" "" "HC01455" "xoltetrol" "MNXM163006" "m01090c" "m01090c"
-"MAM01090m" "MAM01090" "xoltetrol" "C05446" "HMDB0001231" "CHEBI:17278" "193321" "LMST04030014" "" "HC01455" "xoltetrol" "MNXM163006" "m01090m" "m01090m"
+"MAM01090c" "MAM01090" "xoltetrol" "C05446" "HMDB0006264" "CHEBI:17278" "193321" "LMST04030014" "" "HC01455" "xoltetrol" "MNXM163006" "m01090c" "m01090c"
+"MAM01090m" "MAM01090" "xoltetrol" "C05446" "HMDB0006264" "CHEBI:17278" "193321" "LMST04030014" "" "HC01455" "xoltetrol" "MNXM163006" "m01090m" "m01090m"
"MAM01091c" "MAM01091" "" "" "" "" "" "" "CE4874" "" "CE4874" "MNXM163692" "m01091c" "m01091c"
"MAM01091m" "MAM01091" "" "" "" "" "" "" "CE4874" "" "CE4874" "MNXM163692" "m01091m" "m01091m"
"MAM01092c" "MAM01092" "" "C05446" "HMDB0001231" "CHEBI:17278" "193321" "" "CE0232" "" "M01092" "MNXM162569" "m01092c" "m01092c"
@@ -1766,7 +1755,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01122m" "MAM01122" "" "" "" "" "" "" "CE5342" "" "CE5342" "MNXM162806" "m01122m" "m01122m"
"MAM01122x" "MAM01122" "" "" "" "" "" "" "CE5342" "" "CE5342" "MNXM162806" "m01122p" "m01122p"
"MAM01122r" "MAM01122" "" "" "" "" "" "" "CE5342" "" "CE5342" "MNXM162806" "m01122r" "m01122r"
-"MAM01123c" "MAM01123" "" "" "" "" "" "" "CE2084" "" "CE7097" "MNXM162741" "m01123c" "m01123c"
+"MAM01123c" "MAM01123" "" "" "" "" "" "" "CE7097" "" "CE7097" "MNXM162741" "m01123c" "m01123c"
"MAM01124c" "MAM01124" "" "" "" "" "53481526" "" "CE5178" "" "CE5178" "MNXM38280" "m01124c" "m01124c"
"MAM01124m" "MAM01124" "" "" "" "" "53481526" "" "CE5178" "" "CE5178" "MNXM38280" "m01124m" "m01124m"
"MAM01124x" "MAM01124" "" "" "" "" "53481526" "" "CE5178" "" "CE5178" "MNXM38280" "m01124p" "m01124p"
@@ -1921,7 +1910,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01227m" "MAM01227" "" "" "" "" "" "" "CE5719" "" "CE5719" "MNXM39477" "m01227m" "m01227m"
"MAM01228m" "MAM01228" "" "" "" "" "" "" "CE5847" "" "CE5847" "MNXM39478" "m01228m" "m01228m"
"MAM01229c" "MAM01229" "" "" "" "" "" "" "CE3136" "" "CE3136" "MNXM166718" "m01229c" "m01229c"
-"MAM01230c" "MAM01230" "retinal_cis_9" "" "" "" "638015" "" "CE5575" "" "retinal_cis_9" "MNXM162775;MNXM2209" "m01230c" "m01230c"
+"MAM01230c" "MAM01230" "retinal_cis_9" "" "" "" "6436082" "" "CE5575" "" "retinal_cis_9" "MNXM162775;MNXM2209" "m01230c" "m01230c"
"MAM01230r" "MAM01230" "retinal_cis_9" "" "" "" "638015" "" "CE5575" "" "retinal_cis_9" "MNXM162775;MNXM2209" "m01230r" "m01230r"
"MAM01231c" "MAM01231" "" "" "" "" "449171" "" "CE1617" "" "CE1617" "MNXM10472" "m01231c" "m01231c"
"MAM01231r" "MAM01231" "" "" "" "" "449171" "" "CE1617" "" "CE1617" "MNXM10472" "m01231r" "m01231r"
@@ -2000,12 +1989,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01265m" "MAM01265" "prpncoa" "C00894" "" "CHEBI:15513" "439340" "" "" "HC00579" "prpncoa" "MNXM650" "m01265m" "m01265m"
"MAM01266c" "MAM01266" "" "C10905" "" "" "" "" "" "HC01797" "HC01797" "MNXM2964" "m01266c" "m01266c"
"MAM01267c" "MAM01267" "" "" "" "" "" "" "" "HC02116" "HC02116" "MNXM166880" "m01267c" "m01267c"
-"MAM01268c" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268c" "m01268c"
-"MAM01268m" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268m" "m01268m"
-"MAM01268n" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268n" "m01268n"
-"MAM01268x" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268p" "m01268p"
-"MAM01268r" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268r" "m01268r"
-"MAM01268e" "MAM01268" "" "" "" "" "" "PROTEIN" "" "" "M01268" "" "m01268s" "m01268s"
"MAM01269c" "MAM01269" "" "" "" "" "" "" "" "HC02082" "HC02082" "" "m01269c" "m01269c"
"MAM01270c" "MAM01270" "" "" "" "" "" "" "" "HC02089" "HC02089" "" "m01270c" "m01270c"
"MAM01271c" "MAM01271" "" "" "" "" "" "" "" "HC02044" "HC02044" "" "m01271c" "m01271c"
@@ -2088,7 +2071,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01311x" "MAM01311" "akgp_hs" "C03715" "" "CHEBI:17197" "" "" "" "" "akgp_hs" "MNXM9595" "m01311p" "m01311p"
"MAM01312c" "MAM01312" "" "C00499" "HMDB0001209" "CHEBI:30837" "203" "" "" "" "alltt" "MNXM584" "m01312c" "m01312c"
"MAM01313c" "MAM01313" "" "C01551" "HMDB0000462" "CHEBI:15676" "204" "" "" "" "alltn" "MNXM612" "m01313c" "m01313c"
-"MAM01314c" "MAM01314" "" "C13712" "HMDB0001449" "CHEBI:50169" "92786" "LMST02030130" "CE2211" "" "CE2211" "MNXM3494" "m01314c" "m01314c"
+"MAM01314c" "MAM01314" "" "C13712" "HMDB0001449" "CHEBI:50169" "92786" "LMST02030130" "CE2211" "" "CE2211" "MNXM3494" "m01314c" "m01314c;MAM00759c"
"MAM01315c" "MAM01315" "" "C07599" "HMDB0002818" "CHEBI:730073" "5781" "" "CE0074" "" "CE0074" "MNXM15828" "m01315c" "m01315c"
"MAM01315e" "MAM01315" "" "C07599" "HMDB0002818" "CHEBI:730073" "5781" "" "CE0074" "" "CE0074" "MNXM15828" "m01315s" "m01315s"
"MAM01316c" "MAM01316" "decdp" "" "" "" "" "" "" "" "decdp" "MNXM1721" "m01316c" "m01316c"
@@ -2098,7 +2081,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01319c" "MAM01319" "" "C19581" "" "" "" "" "" "" "M01319" "MNXM10644" "m01319c" "m01319c"
"MAM01320c" "MAM01320" "" "C19580" "" "" "" "" "" "" "M01320" "MNXM10645" "m01320c" "m01320c"
"MAM01321c" "MAM01321" "" "" "" "" "" "" "CE5853" "" "CE5853" "MNXM15963" "m01321c" "m01321c"
-"MAM01322c" "MAM01322" "gal1p" "C03384" "" "CHEBI:17973" "123912" "" "" "" "gal1p" "MNXM336" "m01322c" "m01322c"
+"MAM01322c" "MAM01322" "gal1p" "C00446" "" "CHEBI:17973" "123912" "" "" "" "gal1p" "MNXM336" "m01322c" "m01322c"
"MAM01323c" "MAM01323" "m1mpdol__L" "C05861" "" "CHEBI:28067" "" "" "" "" "m1mpdol_L" "MNXM148043" "m01323c" "m01323c"
"MAM01324c" "MAM01324" "acgagbside_hs" "" "" "" "" "" "" "" "acgagbside_hs" "MNXM7051" "m01324c" "m01324c"
"MAM01324g" "MAM01324" "acgagbside_hs" "" "" "" "" "" "" "" "acgagbside_hs" "MNXM7051" "m01324g" "m01324g"
@@ -2301,10 +2284,8 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01420c" "MAM01420" "cbp" "C00169" "" "CHEBI:17672" "278" "" "" "HC00164" "cbp" "MNXM138" "m01420c" "m01420c"
"MAM01420m" "MAM01420" "cbp" "C00169" "" "CHEBI:17672" "278" "" "" "HC00164" "cbp" "MNXM138" "m01420m" "m01420m"
"MAM01420r" "MAM01420" "cbp" "C00169" "" "CHEBI:17672" "278" "" "" "HC00164" "cbp" "MNXM138" "m01420r" "m01420r"
-"MAM01421c" "MAM01421" "h2co3" "C01353" "" "CHEBI:28976" "" "" "" "HC02169" "h2co3" "MNXM60" "m01421c" "m01421c"
-"MAM01421m" "MAM01421" "h2co3" "C01353" "" "CHEBI:28976" "" "" "" "HC02169" "h2co3" "MNXM60" "m01421m" "m01421m"
-"MAM01421e" "MAM01421" "h2co3" "C01353" "" "CHEBI:28976" "" "" "" "HC02169" "h2co3" "MNXM60" "m01421s" "m01421s"
"MAM01422c" "MAM01422" "cbtnCCP" "C04419" "" "" "" "" "" "" "" "MNXM5655" "m01422c" "m01422c"
+"MAM01422m" "MAM01422" "cbtnCCP" "C04419" "" "" "" "" "" "" "" "MNXM5655" "" ""
"MAM01423c" "MAM01423" "carn" "C00386" "HMDB0000033" "CHEBI:15727" "439224" "" "" "HC00321" "carn" "MNXM114412;MNXM1419" "m01423c" "m01423c"
"MAM01424c" "MAM01424" "cdp" "C00112" "" "CHEBI:17239" "6132" "" "" "HC00110" "cdp" "MNXM220" "m01424c" "m01424c"
"MAM01424m" "MAM01424" "cdp" "C00112" "" "CHEBI:17239" "6132" "" "" "HC00110" "cdp" "MNXM220" "m01424m" "m01424m"
@@ -2335,10 +2316,10 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01434c" "MAM01434" "dcholcoa" "C05337" "HMDB0006292" "CHEBI:28701" "11953854" "" "" "HC01426" "dcholcoa" "MNXM834" "m01434c" "m01434c"
"MAM01434x" "MAM01434" "dcholcoa" "C05337" "HMDB0006292" "CHEBI:28701" "11953854" "" "" "HC01426" "dcholcoa" "MNXM834" "m01434p" "m01434p"
"MAM01434r" "MAM01434" "dcholcoa" "C05337" "HMDB0006292" "CHEBI:28701" "11953854" "" "" "HC01426" "dcholcoa" "MNXM834" "m01434r" "m01434r"
-"MAM01435c" "MAM01435" "" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "LMST04010032" "" "HC00958" "HC00958" "MNXM1183" "m01435c" "m01435c"
+"MAM01435c" "MAM01435" "" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "LMST04010032" "" "HC00958" "HC00958" "MNXM1183" "m01435c" "m01435c;MAM03318c"
"MAM01435x" "MAM01435" "" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "LMST04010032" "" "HC00958" "HC00958" "MNXM1183" "m01435p" "m01435p"
-"MAM01435r" "MAM01435" "" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "LMST04010032" "" "HC00958" "HC00958" "MNXM1183" "m01435r" "m01435r"
-"MAM01435e" "MAM01435" "" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "LMST04010032" "" "HC00958" "HC00958" "MNXM1183" "m01435s" "m01435s"
+"MAM01435r" "MAM01435" "" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "LMST04010032" "" "HC00958" "HC00958" "MNXM1183" "m01435r" "m01435r;MAM03318r"
+"MAM01435e" "MAM01435" "C02528" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "LMST04010032" "" "HC00958" "C02528;HC00958" "MNXM1183" "m01435s" "C02528_s;m01435s;MAM03318e"
"MAM01436c" "MAM01436" "" "C00461" "" "CHEBI:17029" "" "" "" "" "M01436" "MNXM10923;MNXM1271" "m01436c" "m01436c"
"MAM01437c" "MAM01437" "" "C00461" "" "CHEBI:17029" "" "" "" "" "M01437" "MNXM1271;MNXM46301" "m01437c" "m01437c"
"MAM01438c" "MAM01438" "chtn" "" "" "" "" "" "" "HC02118" "chtn" "MNXM1271" "m01438c" "m01438c"
@@ -2352,7 +2333,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01443c" "MAM01443" "" "C06755" "" "CHEBI:27869" "" "" "" "" "M01443" "MNXM1468" "m01443c" "m01443c"
"MAM01444c" "MAM01444" "" "C14859" "" "" "" "" "" "" "M01444" "MNXM5082" "m01444c" "m01444c"
"MAM01445c" "MAM01445" "cholate" "C00695" "HMDB0000619" "CHEBI:16359" "221493" "LMST04010001" "" "HC00502" "cholate" "MNXM450" "m01445c" "m01445c"
-"MAM01445m" "MAM01445" "cholate" "C00695" "HMDB0000619" "CHEBI:16359" "221493" "LMST04010001" "" "HC00502" "cholate" "MNXM450" "m01445m" "m01445m"
"MAM01445x" "MAM01445" "cholate" "C00695" "HMDB0000619" "CHEBI:16359" "221493" "LMST04010001" "" "HC00502" "cholate" "MNXM450" "m01445p" "m01445p"
"MAM01445r" "MAM01445" "cholate" "C00695" "HMDB0000619" "CHEBI:16359" "221493" "LMST04010001" "" "HC00502" "cholate" "MNXM450" "m01445r" "m01445r"
"MAM01445e" "MAM01445" "cholate" "C00695" "HMDB0000619" "CHEBI:16359" "221493" "LMST04010001" "" "HC00502" "cholate" "MNXM450" "m01445s" "m01445s"
@@ -2500,7 +2480,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01513r" "MAM01513" "chol" "C00114" "HMDB0000097" "CHEBI:15354" "305" "" "" "HC00112" "chol" "MNXM90" "m01513r" "m01513r"
"MAM01513e" "MAM01513" "chol" "C00114" "HMDB0000097" "CHEBI:15354" "305" "" "" "HC00112" "chol" "MNXM90" "m01513s" "m01513s"
"MAM01514c" "MAM01514" "cholcoa" "C01794" "HMDB0001374" "CHEBI:15519" "439573" "" "" "HC00844" "cholcoa" "MNXM162468;MNXM431" "m01514c" "m01514c"
-"MAM01514m" "MAM01514" "cholcoa" "C01794" "HMDB0001374" "CHEBI:15519" "439573" "" "" "HC00844" "cholcoa" "MNXM162468;MNXM431" "m01514m" "m01514m"
"MAM01514x" "MAM01514" "cholcoa" "C01794" "HMDB0001374" "CHEBI:15519" "439573" "" "" "HC00844" "cholcoa" "MNXM162468;MNXM431" "m01514p" "m01514p"
"MAM01514r" "MAM01514" "cholcoa" "C01794" "HMDB0001374" "CHEBI:15519" "439573" "" "" "HC00844" "cholcoa" "MNXM162468;MNXM431" "m01514r" "m01514r"
"MAM01515g" "MAM01515" "cs_a_b_pre2" "" "" "" "" "" "" "" "cs_a_b_pre2" "MNXM148157" "m01515g" "m01515g"
@@ -2862,10 +2841,10 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01695c" "MAM01695" "digalsgalside_hs" "C06127" "" "" "" "" "" "" "digalsgalside_hs" "MNXM91564" "m01695c" "m01695c"
"MAM01695g" "MAM01695" "digalsgalside_hs" "C06127" "" "" "" "" "" "" "digalsgalside_hs" "MNXM91564" "m01695g" "m01695g"
"MAM01695e" "MAM01695" "digalsgalside_hs" "C06127" "" "" "" "" "" "" "digalsgalside_hs" "MNXM91564" "m01695s" "m01695s"
-"MAM01696c" "MAM01696" "dlnlcg" "C03242" "HMDB0002925" "CHEBI:53486" "5280581" "LMFA01030158" "CE2516" "HC02100" "dlnlcg" "MNXM147467;MNXM5607" "m01696c" "m01696c"
+"MAM01696c" "MAM01696" "CE2516;dlnlcg" "C03242" "HMDB0002925" "CHEBI:53486" "5280581" "LMFA01030158" "CE2516" "HC02100" "CE2516;dlnlcg" "MNXM147467;MNXM5607" "m01696c" "CE2516_c;m01696c;MAM03332c"
"MAM01696l" "MAM01696" "dlnlcg" "C03242" "HMDB0002925" "CHEBI:53486" "5280581" "LMFA01030158" "CE2516" "HC02100" "dlnlcg" "MNXM147467;MNXM5607" "m01696l" "m01696l"
"MAM01696r" "MAM01696" "dlnlcg" "C03242" "HMDB0002925" "CHEBI:53486" "5280581" "LMFA01030158" "CE2516" "HC02100" "dlnlcg" "MNXM147467;MNXM5607" "m01696r" "m01696r"
-"MAM01696e" "MAM01696" "dlnlcg" "C03242" "HMDB0002925" "CHEBI:53486" "5280581" "LMFA01030158" "CE2516" "HC02100" "dlnlcg" "MNXM147467;MNXM5607" "m01696s" "m01696s"
+"MAM01696e" "MAM01696" "dlnlcg" "C03242" "HMDB0002925" "CHEBI:53486" "5280581" "LMFA01030158" "CE2516" "HC02100" "CE2516;dlnlcg" "MNXM147467;MNXM5607" "m01696s" "CE2516_s;m01696s;MAM03332e"
"MAM01697c" "MAM01697" "dlnlcgcoa" "C03595" "HMDB0003947" "CHEBI:27979" "16061156" "LMFA07050011" "" "HC02102" "dlnlcgcoa" "MNXM1536;MNXM5128" "m01697c" "m01697c"
"MAM01697m" "MAM01697" "dlnlcgcoa" "C03595" "HMDB0003947" "CHEBI:27979" "16061156" "LMFA07050011" "" "HC02102" "dlnlcgcoa" "MNXM1536;MNXM5128" "m01697m" "m01697m"
"MAM01697r" "MAM01697" "dlnlcgcoa" "C03595" "HMDB0003947" "CHEBI:27979" "16061156" "LMFA07050011" "" "HC02102" "dlnlcgcoa" "MNXM1536;MNXM5128" "m01697r" "m01697r"
@@ -2929,7 +2908,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01727m" "MAM01727" "" "" "" "" "" "" "" "" "M01727" "" "m01727m" "m01727m"
"MAM01727r" "MAM01727" "" "" "" "" "" "" "" "" "M01727" "" "m01727r" "m01727r"
"MAM01728c" "MAM01728" "ddcaACP" "C05223" "" "" "" "" "" "HC01394" "ddcaACP" "MNXM5723;MNXM89851" "m01728c" "m01728c"
-"MAM01729c" "MAM01729" "" "" "HMDB0002250" "" "168381" "" "" "" "M01729" "MNXM51468;MNXM588354" "m01729c" "m01729c"
+"MAM01729c" "MAM01729" "" "" "HMDB0002250" "" "168381" "" "" "" "M01729" "MNXM51468;MNXM588354" "m01729c" "m01729c;MAM03540c"
"MAM01729m" "MAM01729" "" "" "HMDB0002250" "" "168381" "" "" "" "M01729" "MNXM51468;MNXM588354" "m01729m" "m01729m"
"MAM01729r" "MAM01729" "" "" "HMDB0002250" "" "168381" "" "" "" "M01729" "MNXM51468;MNXM588354" "m01729r" "m01729r"
"MAM01730c" "MAM01730" "dolichol__L" "C00381" "" "CHEBI:16091" "" "LMPR03070004" "" "" "dolichol_L" "MNXM147098" "m01730c" "m01730c"
@@ -2950,7 +2929,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01737c" "MAM01737" "dopasf" "C13690" "" "CHEBI:37946" "122136" "" "" "" "dopasf" "MNXM163796" "m01737c" "m01737c"
"MAM01737e" "MAM01737" "dopasf" "C13690" "" "CHEBI:37946" "122136" "" "" "" "dopasf" "MNXM163796" "m01737s" "m01737s"
"MAM01738c" "MAM01738" "" "" "" "" "162602" "" "CE5276" "" "CE5276" "MNXM5727" "m01738c" "m01738c"
-"MAM01739c" "MAM01739" "" "C05578" "HMDB0004058" "CHEBI:27404" "114683" "" "CE4888" "" "CE4888" "MNXM163363" "m01739c" "m01739c"
+"MAM01739c" "MAM01739" "" "C05578" "HMDB0004058" "CHEBI:27404" "114683" "" "CE4888" "" "CE4888;M03162" "MNXM163363;MNXM2336" "m01739c;m03162c" "m01739c;m03162c;MAM03162c"
"MAM01740c" "MAM01740" "orn__D" "C00515" "HMDB0003374" "CHEBI:16176" "71082" "" "" "" "orn_D" "MNXM1148" "m01740c" "m01740c"
"MAM01740x" "MAM01740" "orn__D" "C00515" "HMDB0003374" "CHEBI:16176" "71082" "" "" "" "orn_D" "MNXM1148" "m01740p" "m01740p"
"MAM01740e" "MAM01740" "orn__D" "C00515" "HMDB0003374" "CHEBI:16176" "71082" "" "" "" "orn_D" "MNXM1148" "m01740s" "m01740s"
@@ -2967,7 +2946,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01744e" "MAM01744" "ser__D" "C00740" "HMDB0003406" "CHEBI:16523" "71077" "" "" "" "ser_D" "MNXM694" "m01744s" "m01744s"
"MAM01745c" "MAM01745" "tag__D" "C00795" "HMDB0003418" "CHEBI:47693" "92092" "" "" "" "tagat_D" "MNXM92401" "m01745c" "m01745c"
"MAM01745e" "MAM01745" "tag__D" "C00795" "HMDB0003418" "CHEBI:47693" "92092" "" "" "" "tagat_D" "MNXM92401" "m01745s" "m01745s"
-"MAM01746c" "MAM01746" "tag1p__D" "C01097" "" "CHEBI:4251" "439396" "" "" "HC00664" "HC00664" "MNXM164716;MNXM795" "m01746c" "m01746c"
+"MAM01746c" "MAM01746" "tag6p__D" "C01097" "" "CHEBI:4251" "439396" "" "" "HC00664" "HC00664" "MNXM164716;MNXM795" "m01746c" "m01746c"
"MAM01747c" "MAM01747" "dtdp" "C00363" "HMDB0001274" "CHEBI:18075" "164628" "" "" "HC00307" "dtdp" "MNXM152" "m01747c" "m01747c"
"MAM01747m" "MAM01747" "dtdp" "C00363" "HMDB0001274" "CHEBI:18075" "164628" "" "" "HC00307" "dtdp" "MNXM152" "m01747m" "m01747m"
"MAM01747n" "MAM01747" "dtdp" "C00363" "HMDB0001274" "CHEBI:18075" "164628" "" "" "HC00307" "dtdp" "MNXM152" "m01747n" "m01747n"
@@ -3121,7 +3100,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01813c" "MAM01813" "" "C00162" "" "CHEBI:35366" "" "" "" "HC02065" "HC02065" "MNXM72" "m01813c" "m01813c"
"MAM01814c" "MAM01814" "" "C00162" "" "CHEBI:35366" "" "" "" "HC02064" "HC02064" "MNXM72" "m01814c" "m01814c"
"MAM01815c" "MAM01815" "" "C00162" "" "CHEBI:35366" "" "" "" "HC02063" "HC02063" "MNXM72" "m01815c" "m01815c"
-"MAM01816n" "MAM01816" "" "" "" "" "" "PROTEIN" "" "" "M01816" "" "m01816n" "m01816n"
"MAM01819e" "MAM01819" "" "C00162" "" "CHEBI:35366" "" "" "" "" "M01819" "MNXM72" "m01819s" "m01819s"
"MAM01820e" "MAM01820" "" "C00162" "" "CHEBI:35366" "" "" "" "" "M01820" "MNXM72" "m01820s" "m01820s"
"MAM01821c" "MAM01821" "fe2" "C14818" "HMDB0000692" "CHEBI:29033" "27284" "" "" "HC01846" "fe2" "MNXM111" "m01821c" "m01821c"
@@ -3139,6 +3117,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01827l" "MAM01827" "" "C00393" "" "" "" "PROTEIN" "" "HC01852" "HC01852" "MNXM5157" "m01827l" "m01827l"
"MAM01827e" "MAM01827" "" "C00393" "" "" "" "PROTEIN" "" "HC01852" "HC01852" "MNXM5157" "m01827s" "m01827s"
"MAM01828c" "MAM01828" "fmn" "C00061" "HMDB0001520" "CHEBI:17621" "643976" "" "" "HC00064" "fmn" "MNXM119" "m01828c" "m01828c"
+"MAM01828x" "MAM01828" "fmn" "C00061" "HMDB0001520" "CHEBI:17621" "643976" "" "" "" "" "MNXM119" "" ""
"MAM01829g" "MAM01829" "fn2m2masn" "G00016" "" "CHEBI:32984" "" "" "" "" "fn2m2masn" "MNXM12419" "m01829g" "m01829g"
"MAM01830c" "MAM01830" "fol" "C00504" "HMDB0000121" "CHEBI:27470" "6037" "" "" "HC00396" "fol" "MNXM617" "m01830c" "m01830c"
"MAM01830m" "MAM01830" "fol" "C00504" "HMDB0000121" "CHEBI:27470" "6037" "" "" "HC00396" "fol" "MNXM617" "m01830m" "m01830m"
@@ -3440,9 +3419,9 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02007c" "MAM02007" "glx" "C00048" "HMDB0000119" "CHEBI:16891" "760" "" "" "" "glx" "MNXM69" "m02007c" "m02007c"
"MAM02007m" "MAM02007" "glx" "C00048" "HMDB0000119" "CHEBI:16891" "760" "" "" "" "glx" "MNXM69" "m02007m" "m02007m"
"MAM02007x" "MAM02007" "glx" "C00048" "HMDB0000119" "CHEBI:16891" "760" "" "" "" "glx" "MNXM69" "m02007p" "m02007p"
-"MAM02008c" "MAM02008" "gm1_hs" "C04911" "" "CHEBI:18216" "" "LMSP0601AP00" "" "HC02161" "HC02161" "MNXM164818" "m02008c" "m02008c"
-"MAM02008g" "MAM02008" "gm1_hs" "C04911" "" "CHEBI:18216" "" "LMSP0601AP00" "" "HC02161" "HC02161" "MNXM164818" "m02008g" "m02008g"
-"MAM02008l" "MAM02008" "gm1_hs" "C04911" "" "CHEBI:18216" "" "LMSP0601AP00" "" "HC02161" "HC02161" "MNXM164818" "m02008l" "m02008l"
+"MAM02008c" "MAM02008" "HC02161" "C04911" "" "CHEBI:18216" "" "LMSP0601AP00" "" "HC02161" "HC02161" "MNXM164818" "m02008c" "m02008c"
+"MAM02008g" "MAM02008" "HC02161" "C04911" "" "CHEBI:18216" "" "LMSP0601AP00" "" "HC02161" "HC02161" "MNXM164818" "m02008g" "m02008g"
+"MAM02008l" "MAM02008" "HC02161" "C04911" "" "CHEBI:18216" "" "LMSP0601AP00" "" "HC02161" "HC02161" "MNXM164818" "m02008l" "m02008l"
"MAM02009g" "MAM02009" "gm1a_hs" "" "" "" "" "" "" "" "gm1a_hs" "MNXM92361" "m02009g" "m02009g"
"MAM02010c" "MAM02010" "gm1b_hs" "G00125" "" "" "" "" "" "" "gm1b_hs" "MNXM8685" "m02010c" "m02010c"
"MAM02010g" "MAM02010" "gm1b_hs" "G00125" "" "" "" "" "" "" "gm1b_hs" "MNXM8685" "m02010g" "m02010g"
@@ -3543,7 +3522,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02041e" "MAM02041" "h2o2" "C00027" "HMDB0003125" "CHEBI:16240" "784" "" "" "HC00036" "h2o2" "MNXM22" "m02041s" "m02041s"
"MAM02042c" "MAM02042" "" "C00283" "" "CHEBI:16136" "402" "" "" "HC00250" "HC00250" "MNXM162964;MNXM89582" "m02042c" "m02042c"
"MAM02042e" "MAM02042" "" "C00283" "" "CHEBI:16136" "402" "" "" "HC00250" "HC00250" "MNXM162964;MNXM89582" "m02042s" "m02042s"
-"MAM02043c" "MAM02043" "" "C00320" "" "CHEBI:16094" "24478" "" "" "HC01501" "HC01501" "MNXM164836;MNXM323" "m02043c" "m02043c"
+"MAM02043c" "MAM02043" "" "C05529" "" "CHEBI:5587" "24478" "" "" "HC01501" "HC01501" "MNXM164836;MNXM323" "m02043c" "m02043c"
"MAM02044c" "MAM02044" "" "" "" "" "" "PROTEIN" "" "HC01939" "HC01939" "" "m02044c" "m02044c"
"MAM02044l" "MAM02044" "" "" "" "" "" "PROTEIN" "" "HC01939" "HC01939" "" "m02044l" "m02044l"
"MAM02044e" "MAM02044" "" "" "" "" "" "PROTEIN" "" "HC01939" "HC01939" "" "m02044s" "m02044s"
@@ -3955,11 +3934,11 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02325e" "MAM02325" "3aib" "C03284" "HMDB0002166" "CHEBI:33094" "439434" "" "" "" "3aib" "MNXM2053;MNXM786" "m02325s" "m02325s"
"MAM02326e" "MAM02326" "" "C02512" "" "CHEBI:16934" "439742" "" "" "HC00955" "HC00955" "MNXM1014" "m02326s" "m02326s"
"MAM02327m" "MAM02327" "4hglusa" "C05938" "HMDB0006556" "CHEBI:27809" "440851" "" "" "" "4hglusa" "MNXM2687" "m02327m" "m02327m"
-"MAM02328c" "MAM02328" "galgluside_hs" "C01290" "HMDB0004866" "CHEBI:17950" "" "LMSP0501AB00" "" "HC02162" "C01290" "MNXM269" "m02328c" "m02328c"
-"MAM02328g" "MAM02328" "galgluside_hs" "C01290" "HMDB0004866" "CHEBI:17950" "" "LMSP0501AB00" "" "HC02162" "C01290" "MNXM269" "m02328g" "m02328g"
-"MAM02328l" "MAM02328" "galgluside_hs" "C01290" "HMDB0004866" "CHEBI:17950" "" "LMSP0501AB00" "" "HC02162" "C01290" "MNXM269" "m02328l" "m02328l"
-"MAM02328r" "MAM02328" "galgluside_hs" "C01290" "HMDB0004866" "CHEBI:17950" "" "LMSP0501AB00" "" "HC02162" "C01290" "MNXM269" "m02328r" "m02328r"
-"MAM02328e" "MAM02328" "galgluside_hs" "C01290" "HMDB0004866" "CHEBI:17950" "" "LMSP0501AB00" "" "HC02162" "C01290" "MNXM269" "m02328s" "m02328s"
+"MAM02328c" "MAM02328" "digalside_hs" "C01290" "HMDB0004866" "CHEBI:17950" "" "LMSP0501AB00" "" "HC02162" "C01290" "MNXM269" "m02328c" "m02328c"
+"MAM02328g" "MAM02328" "digalside_hs" "C01290" "HMDB0004866" "CHEBI:17950" "" "LMSP0501AB00" "" "HC02162" "C01290" "MNXM269" "m02328g" "m02328g"
+"MAM02328l" "MAM02328" "digalside_hs" "C01290" "HMDB0004866" "CHEBI:17950" "" "LMSP0501AB00" "" "HC02162" "C01290" "MNXM269" "m02328l" "m02328l"
+"MAM02328r" "MAM02328" "digalside_hs" "C01290" "HMDB0004866" "CHEBI:17950" "" "LMSP0501AB00" "" "HC02162" "C01290" "MNXM269" "m02328r" "m02328r"
+"MAM02328e" "MAM02328" "digalside_hs" "C01290" "HMDB0004866" "CHEBI:17950" "" "LMSP0501AB00" "" "HC02162" "C01290" "MNXM269" "m02328s" "m02328s"
"MAM02329c" "MAM02329" "lald__L" "C05999" "" "CHEBI:18419" "439231" "" "" "" "lald_L" "MNXM2387" "m02329c" "m02329c"
"MAM02329m" "MAM02329" "lald__L" "C05999" "" "CHEBI:18419" "439231" "" "" "" "lald_L" "MNXM2387" "m02329m" "m02329m"
"MAM02330g" "MAM02330" "gal14acglcgalgluside_hs" "" "" "" "" "" "" "" "gal14acglcgalgluside_hs" "MNXM6313" "m02330g" "m02330g"
@@ -4101,7 +4080,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02396n" "MAM02396" "" "C06315" "HMDB0005082" "CHEBI:6499" "5280915" "LMFA03040002" "" "" "C06315" "MNXM12130" "m02396n" "m02396n"
"MAM02396x" "MAM02396" "" "C06315" "HMDB0005082" "CHEBI:6499" "5280915" "LMFA03040002" "" "" "C06315" "MNXM12130" "m02396p" "m02396p"
"MAM02396r" "MAM02396" "" "C06315" "HMDB0005082" "CHEBI:6499" "5280915" "LMFA03040002" "" "" "C06315" "MNXM12130" "m02396r" "m02396r"
-"MAM02397c" "MAM02397" "" "C16239" "" "" "" "" "" "" "M02397" "MNXM19093" "m02397c" "m02397c"
"MAM02398c" "MAM02398" "" "C16238" "" "" "23724672" "" "CE5656" "" "CE5656" "MNXM2392" "m02398c" "m02398c"
"MAM02399c" "MAM02399" "" "" "" "" "53481572" "" "CE2102" "" "CE2102" "MNXM60228" "m02399c" "m02399c"
"MAM02401c" "MAM02401" "" "C03127" "" "CHEBI:29160" "" "" "" "" "M02401" "MNXM89832" "m02401c" "m02401c"
@@ -4173,7 +4151,8 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02440e" "MAM02440" "" "C00383" "HMDB0000691" "CHEBI:30794" "867" "" "" "HC00319" "HC00319" "MNXM163844" "m02440s" "m02440s"
"MAM02441c" "MAM02441" "" "C19440" "HMDB0006112" "CHEBI:566274" "10964" "" "CE0737" "" "CE0737" "MNXM61004" "m02441c" "m02441c"
"MAM02442c" "MAM02442" "malACP" "C01209" "" "" "" "" "" "HC00717" "malACP" "MNXM184" "m02442c" "m02442c"
-"MAM02443c" "MAM02443" "" "" "HMDB0002095" "" "22833583" "" "" "HC10859" "HC10859" "MNXM162761" "m02443c" "m02443c"
+"MAM02443e" "MAM02443" "c3dc" "" "HMDB0002095" "" "22833583" "" "" "HC10859" "HC10859;c3dc" "MNXM162761" "" "c3dc_s"
+"MAM02443c" "MAM02443" "c3dc" "" "HMDB0002095" "" "22833583" "" "" "HC10859" "HC10859;c3dc" "MNXM162761" "m02443c" "m02443c;c3dc_c"
"MAM02443m" "MAM02443" "" "" "HMDB0002095" "" "22833583" "" "" "HC10859" "HC10859" "MNXM162761" "m02443m" "m02443m"
"MAM02443x" "MAM02443" "" "" "HMDB0002095" "" "22833583" "" "" "HC10859" "HC10859" "MNXM162761" "m02443p" "m02443p"
"MAM02443r" "MAM02443" "" "" "HMDB0002095" "" "22833583" "" "" "HC10859" "HC10859" "MNXM162761" "m02443r" "m02443r"
@@ -4415,9 +4394,9 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02578x" "MAM02578" "" "C00014" "" "CHEBI:16134" "" "" "" "HC00024" "" "" "m02578p" "m02578p"
"MAM02578r" "MAM02578" "" "C00014" "" "CHEBI:16134" "" "" "" "HC00024" "" "" "m02578r" "m02578r"
"MAM02578e" "MAM02578" "" "C00014" "" "CHEBI:16134" "" "" "" "HC00024" "" "" "m02578s" "m02578s"
-"MAM02579c" "MAM02579" "nh4" "C00014" "HMDB0000051" "CHEBI:16134" "222" "" "" "HC00765" "nh4" "MNXM15" "m02579c" "m02579c"
-"MAM02579m" "MAM02579" "nh4" "C00014" "HMDB0000051" "CHEBI:16134" "222" "" "" "HC00765" "nh4" "MNXM15" "m02579m" "m02579m"
-"MAM02579e" "MAM02579" "nh4" "C00014" "HMDB0000051" "CHEBI:16134" "222" "" "" "HC00765" "nh4" "MNXM15" "m02579s" "m02579s"
+"MAM02579c" "MAM02579" "nh4" "C01342" "HMDB0000051" "CHEBI:28938" "222" "" "" "HC00765" "nh4" "MNXM15" "m02579c" "m02579c"
+"MAM02579m" "MAM02579" "nh4" "C01342" "HMDB0000051" "CHEBI:28938" "222" "" "" "HC00765" "nh4" "MNXM15" "m02579m" "m02579m"
+"MAM02579e" "MAM02579" "nh4" "C01342" "HMDB0000051" "CHEBI:28938" "222" "" "" "HC00765" "nh4" "MNXM15" "m02579s" "m02579s"
"MAM02580c" "MAM02580" "" "C14789" "" "" "" "" "" "" "M02580" "MNXM7572" "m02580c" "m02580c"
"MAM02581c" "MAM02581" "nmn" "C00455" "HMDB0000229" "CHEBI:16171" "14180" "" "" "HC00366" "nmn" "MNXM355" "m02581c" "m02581c"
"MAM02581m" "MAM02581" "nmn" "C00455" "HMDB0000229" "CHEBI:16171" "14180" "" "" "HC00366" "nmn" "MNXM355" "m02581m" "m02581m"
@@ -4543,10 +4522,10 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02646l" "MAM02646" "ocdcea" "C00712" "HMDB0000207" "CHEBI:30823" "5460221" "LMFA01030002" "" "HC00510" "ocdcea" "MNXM306;MNXM727011" "m02646l" "m02646l"
"MAM02646r" "MAM02646" "ocdcea" "C00712" "HMDB0000207" "CHEBI:30823" "5460221" "LMFA01030002" "" "HC00510" "ocdcea" "MNXM306;MNXM727011" "m02646r" "m02646r"
"MAM02646e" "MAM02646" "ocdcea" "C00712" "HMDB0000207" "CHEBI:30823" "5460221" "LMFA01030002" "" "HC00510" "ocdcea" "MNXM306;MNXM727011" "m02646s" "m02646s"
-"MAM02647c" "MAM02647" "odecoa" "C00510" "HMDB0001322" "CHEBI:15534" "5280355" "LMFA07050055" "" "HC00400" "odecoa" "MNXM1848;MNXM686" "m02647c" "m02647c"
-"MAM02647m" "MAM02647" "odecoa" "C00510" "HMDB0001322" "CHEBI:15534" "5280355" "LMFA07050055" "" "HC00400" "odecoa" "MNXM1848;MNXM686" "m02647m" "m02647m"
-"MAM02647x" "MAM02647" "odecoa" "C00510" "HMDB0001322" "CHEBI:15534" "5280355" "LMFA07050055" "" "HC00400" "odecoa" "MNXM1848;MNXM686" "m02647p" "m02647p"
-"MAM02647r" "MAM02647" "odecoa" "C00510" "HMDB0001322" "CHEBI:15534" "5280355" "LMFA07050055" "" "HC00400" "odecoa" "MNXM1848;MNXM686" "m02647r" "m02647r"
+"MAM02647c" "MAM02647" "odecoa" "C00510" "HMDB0001322" "CHEBI:15534" "5280355" "LMFA07050356" "" "HC00400" "odecoa" "MNXM1848;MNXM686" "m02647c" "m02647c"
+"MAM02647m" "MAM02647" "odecoa" "C00510" "HMDB0001322" "CHEBI:15534" "5280355" "LMFA07050356" "" "HC00400" "odecoa" "MNXM1848;MNXM686" "m02647m" "m02647m"
+"MAM02647x" "MAM02647" "odecoa" "C00510" "HMDB0001322" "CHEBI:15534" "5497111" "LMFA07050356" "" "HC00400" "odecoa" "MNXM1848;MNXM686" "m02647p" "m02647p"
+"MAM02647r" "MAM02647" "odecoa" "C00510" "HMDB0001322" "CHEBI:15534" "5280355" "LMFA07050356" "" "HC00400" "odecoa" "MNXM1848;MNXM686" "m02647r" "m02647r"
"MAM02648c" "MAM02648" "eicostet" "" "HMDB0002177" "" "11722594" "LMFA01030176" "" "" "eicostet" "MNXM11474" "m02648c" "m02648c"
"MAM02648l" "MAM02648" "eicostet" "" "HMDB0002177" "" "11722594" "LMFA01030176" "" "" "eicostet" "MNXM11474" "m02648l" "m02648l"
"MAM02648r" "MAM02648" "eicostet" "" "HMDB0002177" "" "11722594" "LMFA01030176" "" "" "eicostet" "MNXM11474" "m02648r" "m02648r"
@@ -4599,17 +4578,17 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02675l" "MAM02675" "hdcea" "C08362" "HMDB0003229" "CHEBI:28716" "445638" "LMFA01030056" "" "HC01981" "hdcea" "MNXM950" "m02675l" "m02675l"
"MAM02675r" "MAM02675" "hdcea" "C08362" "HMDB0003229" "CHEBI:28716" "445638" "LMFA01030056" "" "HC01981" "hdcea" "MNXM950" "m02675r" "m02675r"
"MAM02675e" "MAM02675" "hdcea" "C08362" "HMDB0003229" "CHEBI:28716" "445638" "LMFA01030056" "" "HC01981" "hdcea" "MNXM950" "m02675s" "m02675s"
-"MAM02676c" "MAM02676" "hdcecrn" "" "" "" "11953816" "" "" "HC10854" "hdcecrn" "MNXM8716" "m02676c" "m02676c"
-"MAM02676m" "MAM02676" "hdcecrn" "" "" "" "11953816" "" "" "HC10854" "hdcecrn" "MNXM8716" "m02676m" "m02676m"
-"MAM02676r" "MAM02676" "hdcecrn" "" "" "" "11953816" "" "" "HC10854" "hdcecrn" "MNXM8716" "m02676r" "m02676r"
+"MAM02676c" "MAM02676" "hdcecrn" "" "" "" "129849228" "" "" "HC10854" "hdcecrn" "MNXM8716" "m02676c" "m02676c"
+"MAM02676m" "MAM02676" "hdcecrn" "" "" "" "129849228" "" "" "HC10854" "hdcecrn" "MNXM8716" "m02676m" "m02676m"
+"MAM02676r" "MAM02676" "hdcecrn" "" "" "" "129849228" "" "" "HC10854" "hdcecrn" "MNXM8716" "m02676r" "m02676r"
"MAM02677c" "MAM02677" "hdcoa" "" "HMDB0006532" "CHEBI:53152" "53477852" "LMFA07050059" "CE0852" "HC10852" "hdcoa" "MNXM781;MNXM90167" "m02677c" "m02677c"
"MAM02677m" "MAM02677" "hdcoa" "" "HMDB0006532" "CHEBI:53152" "53477852" "LMFA07050059" "CE0852" "HC10852" "hdcoa" "MNXM781;MNXM90167" "m02677m" "m02677m"
"MAM02677x" "MAM02677" "hdcoa" "" "HMDB0006532" "CHEBI:53152" "53477852" "LMFA07050059" "CE0852" "HC10852" "hdcoa" "MNXM781;MNXM90167" "m02677p" "m02677p"
"MAM02677r" "MAM02677" "hdcoa" "" "HMDB0006532" "CHEBI:53152" "53477852" "LMFA07050059" "CE0852" "HC10852" "hdcoa" "MNXM781;MNXM90167" "m02677r" "m02677r"
-"MAM02678c" "MAM02678" "pmtcoa" "C00154" "HMDB0001338" "CHEBI:15525" "15667" "LMFA07050002" "" "HC00150" "pmtcoa" "MNXM88" "m02678c" "m02678c"
-"MAM02678m" "MAM02678" "pmtcoa" "C00154" "HMDB0001338" "CHEBI:15525" "15667" "LMFA07050002" "" "HC00150" "pmtcoa" "MNXM88" "m02678m" "m02678m"
-"MAM02678x" "MAM02678" "pmtcoa" "C00154" "HMDB0001338" "CHEBI:15525" "15667" "LMFA07050002" "" "HC00150" "pmtcoa" "MNXM88" "m02678p" "m02678p"
-"MAM02678r" "MAM02678" "pmtcoa" "C00154" "HMDB0001338" "CHEBI:15525" "15667" "LMFA07050002" "" "HC00150" "pmtcoa" "MNXM88" "m02678r" "m02678r"
+"MAM02678c" "MAM02678" "pmtcoa" "C00154" "HMDB0001338" "CHEBI:15525" "644109" "LMFA07050002" "" "HC00150" "pmtcoa" "MNXM88" "m02678c" "m02678c"
+"MAM02678m" "MAM02678" "pmtcoa" "C00154" "HMDB0001338" "CHEBI:15525" "644109" "LMFA07050002" "" "HC00150" "pmtcoa" "MNXM88" "m02678m" "m02678m"
+"MAM02678x" "MAM02678" "pmtcoa" "C00154" "HMDB0001338" "CHEBI:15525" "644109" "LMFA07050002" "" "HC00150" "pmtcoa" "MNXM88" "m02678p" "m02678p"
+"MAM02678r" "MAM02678" "pmtcoa" "C00154" "HMDB0001338" "CHEBI:15525" "644109" "LMFA07050002" "" "HC00150" "pmtcoa" "MNXM88" "m02678r" "m02678r"
"MAM02679c" "MAM02679" "ptth" "C00831" "HMDB0003426" "CHEBI:16753" "439322" "" "" "HC00554" "" "MNXM727034" "m02679c" "m02679c"
"MAM02679m" "MAM02679" "ptth" "C00831" "HMDB0003426" "CHEBI:16753" "439322" "" "" "HC00554" "" "MNXM727034" "m02679m" "m02679m"
"MAM02680c" "MAM02680" "pnto__R" "C00864" "HMDB0000210" "CHEBI:7916" "988" "" "" "HC00568" "pnto_R" "MNXM364" "m02680c" "m02680c"
@@ -4729,9 +4708,9 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02745l" "MAM02745" "" "" "HMDB0000521" "" "5312400" "LMFA01030248" "" "" "M02745" "MNXM23686;MNXM499525" "m02745l" "m02745l"
"MAM02745r" "MAM02745" "" "" "HMDB0000521" "" "5312400" "LMFA01030248" "" "" "M02745" "MNXM23686;MNXM499525" "m02745r" "m02745r"
"MAM02745e" "MAM02745" "" "" "HMDB0000521" "" "5312400" "LMFA01030248" "" "" "M02745" "MNXM23686;MNXM499525" "m02745s" "m02745s"
-"MAM02746c" "MAM02746" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "LMPR0104010004" "CE2414" "" "CE2414" "MNXM165293;MNXM1774" "m02746c" "m02746c"
-"MAM02746x" "MAM02746" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "LMPR0104010004" "CE2414" "" "CE2414" "MNXM165293;MNXM1774" "m02746p" "m02746p"
-"MAM02746e" "MAM02746" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "LMPR0104010004" "CE2414" "" "CE2414" "MNXM165293;MNXM1774" "m02746s" "m02746s"
+"MAM02746c" "MAM02746" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "LMPR0104010004" "CE2414" "" "CE2414;phyt" "MNXM165293;MNXM1774;MNXM91275" "m02746c" "m02746c;phyt_c;MAM03884c"
+"MAM02746x" "MAM02746" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "LMPR0104010004" "CE2414" "" "CE2414" "MNXM165293;MNXM1774" "m02746p" "m02746p;MAM03884x"
+"MAM02746e" "MAM02746" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "LMPR0104010004" "CE2414" "" "CE2414;phyt" "MNXM165293;MNXM1774;MNXM91275" "m02746s" "m02746s;phyt_s;MAM03884e"
"MAM02747c" "MAM02747" "phytcoa" "C02060" "" "CHEBI:15538" "439640" "" "CE5122" "" "phytcoa" "MNXM91276;MNXM931" "m02747c" "m02747c"
"MAM02747x" "MAM02747" "phytcoa" "C02060" "" "CHEBI:15538" "439640" "" "CE5122" "" "phytcoa" "MNXM91276;MNXM931" "m02747p" "m02747p"
"MAM02748c" "MAM02748" "" "C12145" "" "CHEBI:31998" "" "LMSP01030000" "" "" "M02748" "MNXM731" "m02748c" "m02748c"
@@ -4757,9 +4736,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02754e" "MAM02754" "4nph" "C00870" "" "CHEBI:16836" "" "" "" "HC00570" "4nph" "MNXM162908" "m02754s" "m02754s"
"MAM02755c" "MAM02755" "" "C00419" "" "CHEBI:15986" "" "" "" "" "M02755" "MNXM162987" "m02755c" "m02755c"
"MAM02756c" "MAM02756" "ppbng" "C00931" "HMDB0000245" "CHEBI:17381" "1021" "" "" "HC00588" "ppbng" "MNXM554" "m02756c" "m02756c"
-"MAM02757c" "MAM02757" "" "" "" "" "" "" "" "" "M02757" "" "m02757c" "m02757c"
-"MAM02757l" "MAM02757" "" "" "" "" "" "" "" "" "M02757" "" "m02757l" "m02757l"
-"MAM02757n" "MAM02757" "" "" "" "" "" "" "" "" "M02757" "" "m02757n" "m02757n"
"MAM02758c" "MAM02758" "" "C04308" "" "" "" "LMGP0201AB00" "" "" "M02758" "MNXM75100" "m02758c" "m02758c"
"MAM02759c" "MAM02759" "ppi" "C00013" "HMDB0000250" "CHEBI:18361" "644102" "" "" "HC00023" "ppi" "MNXM11" "m02759c" "m02759c"
"MAM02759m" "MAM02759" "ppi" "C00013" "HMDB0000250" "CHEBI:18361" "644102" "" "" "HC00023" "ppi" "MNXM11" "m02759m" "m02759m"
@@ -5259,8 +5235,8 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03019x" "MAM03019" "" "" "" "CHEBI:87717" "" "" "" "" "M03019" "" "m03019p" "m03019p"
"MAM03020m" "MAM03020" "" "" "" "CHEBI:77549" "" "" "CE2591" "HC12591" "CE2591" "MNXM683714" "m03020m" "m03020m"
"MAM03020x" "MAM03020" "" "" "" "CHEBI:77549" "" "" "CE2591" "HC12591" "CE2591" "MNXM683714" "m03020p" "m03020p"
-"MAM03021m" "MAM03021" "" "C05279" "HMDB0011123" "CHEBI:28387" "53480665" "" "" "" "C05279" "MNXM2039" "m03021m" "m03021m"
-"MAM03021x" "MAM03021" "" "C05279" "HMDB0011123" "CHEBI:28387" "53480665" "" "" "" "C05279" "MNXM2039" "m03021p" "m03021p"
+"MAM03021m" "MAM03021" "" "C05279" "HMDB0011123" "CHEBI:28387" "5280770" "" "" "" "C05279" "MNXM2039" "m03021m" "m03021m"
+"MAM03021x" "MAM03021" "" "C05279" "HMDB0011123" "CHEBI:28387" "5280770" "" "" "" "C05279" "MNXM2039" "m03021p" "m03021p"
"MAM03022m" "MAM03022" "" "" "" "CHEBI:87701" "" "" "" "" "M03022" "" "m03022m" "m03022m"
"MAM03022x" "MAM03022" "" "" "" "CHEBI:87701" "" "" "" "" "M03022" "" "m03022p" "m03022p"
"MAM03023m" "MAM03023" "" "" "" "" "" "" "CE2594" "HC12594" "CE2594;HC12594" "" "m03023m" "m03023m"
@@ -5511,7 +5487,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03160l" "MAM03160" "" "C06128" "" "CHEBI:27499" "" "LMSP0601AA00" "" "" "M03160" "MNXM147517" "m03160l" "m03160l"
"MAM03161c" "MAM03161" "" "C00182" "" "CHEBI:28087" "" "" "" "" "M03161" "MNXM55375" "m03161c" "m03161c"
"MAM03161e" "MAM03161" "" "C00182" "" "CHEBI:28087" "" "" "" "" "M03161" "MNXM55375" "m03161s" "m03161s"
-"MAM03162c" "MAM03162" "" "C05578" "" "CHEBI:27404" "" "" "" "" "M03162" "MNXM2336" "m03162c" "m03162c"
"MAM03163c" "MAM03163" "ind56qn" "C05579" "" "CHEBI:27406" "" "" "" "" "M03163;ind56qn" "MNXM5183" "m03163c" "m03163c"
"MAM03164c" "MAM03164" "alaala" "C00993" "" "CHEBI:16576" "5460362" "" "" "" "M03164;alaala" "MNXM739338" "m03164c" "m03164c"
"MAM03165c" "MAM03165" "" "" "" "CHEBI:16802" "" "" "" "" "M03165" "MNXM44065" "m03165c" "m03165c"
@@ -5525,7 +5500,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03140c" "MAM03140" "" "" "" "" "" "" "" "" "M03140" "" "m03140c" "m03140c"
"MAM03143c" "MAM03143" "" "" "" "" "" "" "" "" "M03143" "" "m03143c" "m03143c"
"MAM01004m" "MAM01004" "34hpl" "C03672" "HMDB0000755" "CHEBI:17385" "9378" "" "" "" "34hpl" "MNXM114141" "" "m01004m"
-"MAM03226m" "MAM03226" "3hibutcoa" "C04047" "" "CHEBI:15481" "" "" "" "" "3hibutcoa" "MNXM446" "" "3hibutcoa_m"
"MAM00799c" "MAM00799" "3hpcoa" "C05668" "" "CHEBI:27762" "440753" "" "" "HC01557" "3hpcoa" "MNXM1263" "" "m00799c"
"MAM02142c" "MAM02142" "3hpp" "C01013" "HMDB0000700" "CHEBI:33404" "68152" "" "" "HC00625" "3hpp" "MNXM872" "" "m02142c"
"MAM00900c" "MAM00900" "msa" "C00222" "" "CHEBI:17960" "868" "" "" "HC00203" "msa" "MNXM244" "" "m00900c"
@@ -5577,7 +5551,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00809r" "MAM00809" "4mzym_int2" "C15816" "" "CHEBI:50593" "" "LMST01010167" "" "HC02109" "4mzym_int2" "MNXM162901;MNXM36392;MNXM8744" "" "m00809r"
"MAM04082r" "MAM04082" "zym_int2" "" "" "" "22298942" "" "" "" "zym_int2" "MNXM97119" "" "zym_int2_r"
"MAM03158r" "MAM03158" "zymst" "C05437" "" "CHEBI:18252" "92746" "LMST01010066" "" "HC01451" "zymst" "MNXM574" "" "m03158r"
-"MAM02579r" "MAM02579" "nh4" "C00014" "HMDB0000051" "CHEBI:16134" "222" "" "" "HC00765" "nh4" "MNXM15" "" "m02579r"
+"MAM02579r" "MAM02579" "nh4" "C01342" "HMDB0000051" "CHEBI:28938" "222" "" "" "HC00765" "nh4" "MNXM15" "" "m02579r"
"MAM01427m" "MAM01427" "cdpdag_hs" "C00269" "" "" "" "LMGP13010000" "" "HC02078" "cdpdag_hs" "MNXM5661" "" "m01427m"
"MAM02733m" "MAM02733" "pa_hs" "C00416" "" "CHEBI:16337" "" "LMGP10010000" "" "HC02049" "pa_hs" "MNXM77635" "" "m02733m"
"MAM00121x" "MAM00121" "clpndcoa" "C16166" "HMDB0006267" "CHEBI:63541" "53477812" "LMFA07050048" "CE4822" "" "clpndcoa" "MNXM4529;MNXM97364" "" "m00121p"
@@ -5590,11 +5564,11 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01431e" "MAM01431" "crmp_hs" "" "" "" "" "" "" "HC02165" "crmp_hs" "MNXM92165" "" "m01431s"
"MAM00950x" "MAM00950" "dmnoncrn" "" "" "" "" "" "" "" "dmnoncrn" "MNXM8138" "" "m00950p"
"MAM03554x" "MAM03554" "dmnoncoa" "" "" "" "" "" "" "" "dmnoncoa" "MNXM6100" "" "dmnoncoa_p"
-"MAM02579n" "MAM02579" "nh4" "C00014" "HMDB0000051" "CHEBI:16134" "222" "" "" "HC00765" "nh4" "MNXM15" "" "m02579n"
+"MAM02579n" "MAM02579" "nh4" "C01342" "HMDB0000051" "CHEBI:28938" "222" "" "" "HC00765" "nh4" "MNXM15" "" "m02579n"
"MAM00240r" "MAM00240" "dag_hs" "C00641" "" "CHEBI:17815" "" "LMGL02010000" "" "HC02055" "dag_hs" "MNXM59" "" "m00240r"
"MAM02733n" "MAM02733" "pa_hs" "C00416" "" "CHEBI:16337" "" "LMGP10010000" "" "HC02049" "pa_hs" "MNXM77635" "" "m02733n"
"MAM00240e" "MAM00240" "dag_hs" "C00641" "" "CHEBI:17815" "" "LMGL02010000" "" "HC02055" "dag_hs" "MNXM59" "" "m00240s"
-"MAM02579x" "MAM02579" "nh4" "C00014" "HMDB0000051" "CHEBI:16134" "222" "" "" "HC00765" "nh4" "MNXM15" "" "m02579p"
+"MAM02579x" "MAM02579" "nh4" "C01342" "HMDB0000051" "CHEBI:28938" "222" "" "" "HC00765" "nh4" "MNXM15" "" "m02579p"
"MAM02959c" "MAM02959" "tag_hs" "C00422" "" "CHEBI:17855" "" "LMGL03010000" "" "HC02062" "tag_hs" "MNXM9170" "" "m02959c"
"MAM01449r" "MAM01449" "zymstnl" "C03845" "HMDB0006841" "CHEBI:16608" "101770" "LMST01010096" "" "HC02126" "zymstnl" "MNXM2494" "" "m01449r"
"MAM01066r" "MAM01066" "chlstol" "C05439" "" "CHEBI:16290" "" "" "" "HC01452" "chlstol" "MNXM162749;MNXM830" "" "m01066r"
@@ -5610,7 +5584,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01706x" "MAM01706" "dmpp" "C00235" "HMDB0001120" "CHEBI:16057" "647" "LMPR01010001" "" "HC00213" "dmpp" "MNXM132" "" "m01706p"
"MAM01953x" "MAM01953" "grdp" "C00341" "" "CHEBI:17211" "445995" "" "" "HC00288" "grdp" "MNXM100" "" "m01953p"
"MAM03553m" "MAM03553" "dmhptcoa" "" "" "" "" "" "" "" "dmhptcoa" "MNXM8044" "" "dmhptcoa_m"
-"MAM03554c" "MAM03554" "dmnoncoa" "" "" "" "" "" "" "" "dmnoncoa" "MNXM6100" "" "dmnoncoa_c"
"MAM03554m" "MAM03554" "dmnoncoa" "" "" "" "" "" "" "" "dmnoncoa" "MNXM6100" "" "dmnoncoa_m"
"MAM01731c" "MAM01731" "dolglcp__L" "C01246" "" "CHEBI:15812" "" "LMPR03080014" "" "" "dolglcp_L" "MNXM146386" "" "m01731c"
"MAM00164x" "MAM00164" "5dpmev" "C01143" "" "CHEBI:15899" "439418" "" "" "HC00685" "5dpmev" "MNXM689" "" "m00164p"
@@ -5624,8 +5597,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03591g" "MAM03591" "glc1man" "" "" "" "440240" "" "" "" "glc1man" "MNXM7382" "" "glc1man_g"
"MAM03592g" "MAM03592" "glc2man" "" "" "" "" "" "" "" "glc2man" "MNXM13501" "" "glc2man_g"
"MAM03593g" "MAM03593" "glc3man" "" "" "" "" "" "" "" "glc3man" "MNXM18136" "" "glc3man_g"
-"MAM03573m" "MAM03573" "etfox" "" "" "" "" "" "" "" "etfox" "MNXM11479" "" "etfox_m"
-"MAM03574m" "MAM03574" "etfrd" "" "" "" "" "" "" "" "etfrd" "MNXM11480" "" "etfrd_m"
"MAM01893e" "MAM01893" "1glyc_hs" "" "" "" "" "" "" "" "1glyc_hs" "MNXM13807" "" "1glyc_hs_s"
"MAM03315e" "MAM03315" "9_cis_retfa" "" "" "" "" "" "" "" "9_cis_retfa" "MNXM146565" "" "9_cis_retfa_s"
"MAM03577e" "MAM03577" "fucfuc12gal14acglcgalgluside_hs" "" "" "" "" "" "" "" "fucfuc12gal14acglcgalgluside_hs" "MNXM8840" "" "fucfuc12gal14acglcgalgluside_hs_s"
@@ -5634,7 +5605,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03623e" "MAM03623" "glygn5" "" "" "" "" "" "" "" "glygn5" "MNXM11717" "" "glygn5_s"
"MAM00656e" "MAM00656" "lpchol_hs" "C04230" "" "CHEBI:17504" "" "LMGP01050000" "" "HC02016" "lpchol_hs" "MNXM5213" "" "m00656s"
"MAM02715e" "MAM02715" "pglyc_hs" "C00344" "" "" "" "LMGP04010000" "" "HC02096" "pglyc_hs" "MNXM9017" "" "m02715s"
-"MAM03884e" "MAM03884" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "" "" "" "phyt" "MNXM91275" "" "phyt_s"
"MAM02808e" "MAM02808" "ps_hs" "C02737" "" "CHEBI:18303" "" "LMGP03010000" "" "HC02006" "ps_hs" "MNXM5273" "" "m02808s"
"MAM01232e" "MAM01232" "retinol_9_cis" "" "" "" "9947823" "" "CE1754" "" "retinol_9_cis" "MNXM162711;MNXM2626" "" "m01232s"
"MAM00291e" "MAM00291" "retinol_cis_11" "C00899" "" "" "5280382" "LMPR01090005" "" "" "retinol_cis_11" "MNXM162437;MNXM870" "" "m00291s"
@@ -5651,7 +5621,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03788c" "MAM03788" "ocdcyaACP" "" "" "" "" "" "" "" "ocdcyaACP" "MNXM5248" "" "ocdcyaACP_c"
"MAM03787c" "MAM03787" "ocdcya" "" "" "" "" "" "" "" "ocdcya" "MNXM4069" "" "ocdcya_c"
"MAM03887c" "MAM03887" "pristcoa" "" "" "CHEBI:64039" "25137904" "" "" "" "pristcoa" "MNXM7699" "" "pristcoa_c"
-"MAM03884c" "MAM03884" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "" "" "" "phyt" "MNXM91275" "" "phyt_c"
"MAM03791m" "MAM03791" "octd11ecoa" "" "" "" "" "" "" "" "octd11ecoa" "" "" "octd11ecoa_m"
"MAM00108x" "MAM00108" "strdnccoa" "C16163" "" "CHEBI:63545" "23724640" "LMFA07050046" "CE4815" "" "strdnccoa" "MNXM3361" "" "m00108p"
"MAM00103x" "MAM00103" "tmndnccoa" "C16165" "" "" "52922050" "LMFA07050063" "CE4813" "" "tmndnccoa" "MNXM1449;MNXM2869" "" "m00103p"
@@ -5705,7 +5674,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02733g" "MAM02733" "pa_hs" "C00416" "" "CHEBI:16337" "" "LMGP10010000" "" "HC02049" "pa_hs" "MNXM77635" "" "m02733g"
"MAM02684m" "MAM02684" "pchol_hs" "C00157" "" "CHEBI:16110" "" "" "" "HC02000" "pchol_hs" "MNXM2028" "" "m02684m"
"MAM03850r" "MAM03850" "pecgoncoa" "" "" "" "443846" "" "" "" "pecgoncoa" "MNXM92624" "" "pecgoncoa_r"
-"MAM03887x" "MAM03887" "pristcoa" "" "" "CHEBI:64039" "25137904" "" "" "" "pristcoa" "MNXM7699" "" "pristcoa_p"
+"MAM03887x" "MAM03887" "pristcoa" "" "" "CHEBI:77250" "25137904" "" "" "" "pristcoa" "MNXM7699" "" "pristcoa_p"
"MAM02717c" "MAM02717" "pgp_hs" "C03892" "" "" "" "LMGP05010000" "" "HC02095" "pgp_hs" "MNXM12647" "" "m02717c"
"MAM02725m" "MAM02725" "phpyr" "C00166" "HMDB0000205" "CHEBI:30851" "997" "" "" "" "phpyr" "MNXM162242;MNXM210" "" "m02725m"
"MAM00553r" "MAM00553" "pail4p_hs" "C01277" "" "CHEBI:17526" "" "" "" "" "pail4p_hs" "MNXM2456" "" "m00553r"
@@ -5720,7 +5689,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01265x" "MAM01265" "prpncoa" "C00894" "" "CHEBI:15513" "439340" "" "" "HC00579" "prpncoa" "MNXM650" "" "m01265p"
"MAM02808g" "MAM02808" "ps_hs" "C02737" "" "CHEBI:18303" "" "LMGP03010000" "" "HC02006" "ps_hs" "MNXM5273" "" "m02808g"
"MAM02808m" "MAM02808" "ps_hs" "C02737" "" "CHEBI:18303" "" "LMGP03010000" "" "HC02006" "ps_hs" "MNXM5273" "" "m02808m"
-"MAM03884x" "MAM03884" "phyt" "C01607" "HMDB0000801" "CHEBI:16285" "26840" "" "" "" "phyt" "MNXM91275" "" "phyt_p"
"MAM01291x" "MAM01291" "adrn" "C16527" "HMDB0002226" "CHEBI:53487" "5497181" "LMFA01030178" "" "" "adrn" "MNXM40344;MNXM5042" "" "m01291p"
"MAM02816m" "MAM02816" "pyam5p" "C00647" "" "CHEBI:18335" "1053" "" "" "HC00475" "pyam5p" "MNXM366" "" "m02816m"
"MAM02814m" "MAM02814" "pydx5p" "C00018" "HMDB0001491" "CHEBI:18405" "1051" "" "" "HC00028" "pydx5p" "MNXM161" "" "m02814m"
@@ -5751,7 +5719,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03127e" "MAM03127" "" "C05766" "" "CHEBI:28766" "440775" "" "" "HC01609" "HC01609" "MNXM1123;MNXM165232" "" "m03127s"
"MAM01605e" "MAM01605" "cpppg1" "C05768" "HMDB0002158" "CHEBI:28607" "440776" "" "" "HC01610" "cpppg1" "MNXM1322" "" "m01605s"
"MAM02011e" "MAM02011" "gm2_hs" "C04884" "HMDB0004936" "CHEBI:51013" "20057332" "LMSP0601AM00" "" "HC02160" "HC02160" "MNXM164819" "" "m02011s"
-"MAM02008e" "MAM02008" "gm1_hs" "C04911" "" "CHEBI:18216" "" "LMSP0601AP00" "" "HC02161" "HC02161" "MNXM164818" "" "m02008s"
+"MAM02008e" "MAM02008" "HC02161" "C04911" "" "CHEBI:18216" "" "LMSP0601AP00" "" "HC02161" "HC02161" "MNXM164818" "" "m02008s"
"MAM03108e" "MAM03108" "udpg" "C00029" "" "CHEBI:18066" "53477679" "" "" "HC00038" "udpg" "MNXM52" "" "m03108s"
"MAM02764r" "MAM02764" "" "C03428" "" "CHEBI:15442" "" "" "" "HC01118" "HC01118" "MNXM591" "" "m02764r"
"MAM02411x" "MAM02411" "pmtcrn" "C02990" "HMDB0000222" "CHEBI:17490" "11953816" "LMFA07070004" "" "HC01034" "pmtcrn" "MNXM162587;MNXM787" "" "m02411p"
@@ -5759,8 +5727,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01363x" "MAM01363" "arachdcrn" "" "" "" "" "" "" "HC12236" "arachdcrn" "MNXM8358" "" "m01363p"
"MAM01747e" "MAM01747" "dtdp" "C00363" "HMDB0001274" "CHEBI:18075" "164628" "" "" "HC00307" "dtdp" "MNXM152" "" "m01747s"
"MAM00755c" "MAM00755" "dhcholoylcoa" "C05447" "" "CHEBI:27393" "5280796" "LMST01010220" "" "" "dhcholoylcoa" "MNXM163354;MNXM2748" "" "m00755c"
-"MAM03318r" "MAM03318" "C02528" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "" "" "" "C02528" "MNXM1183" "" "C02528_r"
-"MAM03318c" "MAM03318" "C02528" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "" "" "" "C02528" "MNXM1183" "" "C02528_c"
"MAM00726m" "MAM00726" "34dhmald" "C05577" "" "" "151725" "" "" "HC01514" "34dhmald" "MNXM1633" "" "m00726m"
"MAM00727m" "MAM00727" "34dhoxmand" "C05580" "" "" "85782" "" "" "HC01517" "34dhoxmand" "MNXM3473;MNXM90911" "" "m00727m"
"MAM02137m" "MAM02137" "homoval" "C05582" "HMDB0000118" "CHEBI:545959" "1738" "" "" "HC01519" "homoval" "MNXM162963;MNXM3287" "" "m02137m"
@@ -5768,7 +5734,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00820m" "MAM00820" "3m4hpga" "C05583" "" "" "440729" "" "" "HC01520" "3m4hpga" "MNXM162904;MNXM1989" "" "m00820m"
"MAM03136m" "MAM03136" "3mox4hoxm" "C05584" "HMDB0000291" "CHEBI:1127735" "736172" "" "" "HC01521" "3mox4hoxm" "MNXM163196;MNXM3383" "" "m03136m"
"MAM02336x" "MAM02336" "lanost" "C01724" "HMDB0001251" "CHEBI:16521" "246983" "LMST01010017" "" "HC00833" "lanost" "MNXM482" "" "m02336p"
-"MAM03318e" "MAM03318" "C02528" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "" "" "" "C02528" "MNXM1183" "" "C02528_s"
"MAM00755m" "MAM00755" "dhcholoylcoa" "C05447" "" "CHEBI:27393" "5280796" "LMST01010220" "" "" "dhcholoylcoa" "MNXM163354;MNXM2748" "" "m00755m"
"MAM00968r" "MAM00968" "" "C05103" "" "" "22212495" "" "" "HC02110" "HC02110" "MNXM1804" "" "m00968r"
"MAM00051r" "MAM00051" "hdd2coa" "C05272" "HMDB0003945" "CHEBI:28935" "46173176" "LMFA07050020" "" "HC01411" "hdd2coa" "MNXM581" "" "m00051r"
@@ -5779,7 +5744,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03326m" "MAM03326" "" "" "" "" "" "" "CE0692" "" "CE0692" "" "" "CE0692_m"
"MAM03393c" "MAM03393" "HC02154" "" "" "" "" "" "" "HC02154" "HC02154" "MNXM164821" "" "HC02154_c"
"MAM03393e" "MAM03393" "HC02154" "" "" "" "" "" "" "HC02154" "HC02154" "MNXM164821" "" "HC02154_s"
-"MAM00270e" "MAM00270" "wharachd" "C14748" "" "CHEBI:34306" "5283157" "" "" "" "wharachd" "MNXM22451" "" "m00270s"
+"MAM00270e" "MAM00270" "wharachd" "C14748" "" "CHEBI:34306" "5283157" "" "" "HC02179" "wharachd" "MNXM22451;MNXM6760" "m00591s" "m00270s;m00591s;MAM00591e"
"MAM03316m" "MAM03316" "C01241" "C01241" "" "CHEBI:15958" "" "" "" "" "C01241" "MNXM91270" "" "C01241_m"
"MAM03321m" "MAM03321" "C04308" "C04308" "" "" "" "" "" "" "C04308" "MNXM75100" "" "C04308_m"
"MAM03316r" "MAM03316" "C01241" "C01241" "" "CHEBI:15958" "" "" "" "" "C01241" "MNXM91270" "" "C01241_r"
@@ -5804,7 +5769,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02385x" "MAM02385" "lgnc" "C08320" "HMDB0002003" "CHEBI:28866" "11197" "LMFA01010024" "" "HC01788" "lgnc" "MNXM3297;MNXM8841" "" "m02385p"
"MAM00890r" "MAM00890" "3ohodcoa" "C16216" "HMDB0006498" "CHEBI:50571" "22833663" "" "" "" "3ohodcoa" "MNXM513" "" "m00890r"
"MAM00793r" "MAM00793" "" "" "" "" "24906329" "" "CE2248" "" "CE2248" "MNXM1309" "" "m00793r"
-"MAM00057n" "MAM00057" "od2coa" "C16218" "HMDB0006529" "CHEBI:50570" "53477850" "LMFA07050055" "" "" "od2coa" "MNXM954" "" "m00057n"
+"MAM00057n" "MAM00057" "od2coa" "C16218" "HMDB0006529" "CHEBI:50570" "53477850" "LMFA07050385" "" "" "od2coa" "MNXM954" "" "m00057n"
"MAM00793n" "MAM00793" "" "" "" "" "24906329" "" "CE2248" "" "CE2248" "MNXM1309" "" "m00793n"
"MAM02941n" "MAM02941" "stcoa" "C00412" "HMDB0001114" "CHEBI:15541" "439229" "LMFA07050004" "" "HC00338" "stcoa" "MNXM272" "" "m02941n"
"MAM02158e" "MAM02158" "" "" "" "" "124985" "" "CE2011" "" "CE2011" "MNXM57006" "" "m02158s"
@@ -5901,7 +5866,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00761c" "MAM00761" "" "" "" "" "3081084" "" "CE3038" "" "CE3038" "MNXM6853" "" "m00761c"
"MAM01180c" "MAM01180" "" "" "" "" "" "" "CE2345" "" "CE2345" "MNXM164390" "" "m01180c"
"MAM01434m" "MAM01434" "dcholcoa" "C05337" "HMDB0006292" "CHEBI:28701" "11953854" "" "" "HC01426" "dcholcoa" "MNXM834" "" "m01434m"
-"MAM03318m" "MAM03318" "C02528" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "" "" "" "C02528" "MNXM1183" "" "C02528_m"
"MAM00614m" "MAM00614" "dhcholestancoa" "C04644" "HMDB0002159" "CHEBI:15494" "440420" "LMST01010221" "" "HC01332" "dhcholestancoa" "MNXM162803;MNXM90923" "" "m00614m"
"MAM00570e" "MAM00570" "" "C02355" "" "" "439715" "" "" "" "23cump" "MNXM3150" "" "m00570s"
"MAM00921e" "MAM00921" "" "C01368" "" "CHEBI:28895" "101543" "" "" "" "3ump" "MNXM2184" "" "m00921s"
@@ -6062,9 +6026,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00943r" "MAM00943" "" "C15915" "HMDB0006840" "" "23724604" "LMST01010225" "CE2314" "" "CE2314" "MNXM5534" "" "m00943r"
"MAM03377c" "MAM03377" "CE6027" "" "" "" "" "" "CE6027" "" "CE6027" "MNXM164173" "" "CE6027_c"
"MAM03377m" "MAM03377" "CE6027" "" "" "" "" "" "CE6027" "" "CE6027" "MNXM164173" "" "CE6027_m"
-"MAM03354c" "MAM03354" "CE4837" "C16171" "HMDB0006516" "CHEBI:63548" "53477846" "" "CE4837" "" "CE4837" "MNXM165171" "" "CE4837_c"
"MAM00681r" "MAM00681" "" "" "" "" "" "" "CE4830" "" "CE4830" "MNXM145987;MNXM163157" "" "m00681r"
-"MAM03354r" "MAM03354" "CE4837" "C16171" "HMDB0006516" "CHEBI:63548" "53477846" "" "CE4837" "" "CE4837" "MNXM165171" "" "CE4837_r"
"MAM00864r" "MAM00864" "" "" "" "" "" "" "CE4833" "" "CE4833" "MNXM164263" "" "m00864r"
"MAM00714r" "MAM00714" "" "" "" "" "" "" "CE4831" "" "CE4831" "MNXM164188" "" "m00714r"
"MAM00074r" "MAM00074" "" "" "" "" "" "" "CE4835" "" "CE4835" "MNXM145822" "" "m00074r"
@@ -6107,12 +6069,9 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03365r" "MAM03365" "CE5161" "" "" "" "" "" "CE5161" "" "CE5161" "MNXM163175" "" "CE5161_r"
"MAM03366c" "MAM03366" "CE5162" "" "" "" "" "" "CE5162" "" "CE5162" "MNXM163591" "" "CE5162_c"
"MAM03366r" "MAM03366" "CE5162" "" "" "" "" "" "CE5162" "" "CE5162" "MNXM163591" "" "CE5162_r"
-"MAM03367m" "MAM03367" "" "" "" "" "" "" "CE5168" "" "CE5168" "" "" "CE5168_m"
"MAM03367x" "MAM03367" "" "" "" "" "" "" "CE5168" "" "CE5168" "" "" "CE5168_p"
"MAM03367c" "MAM03367" "CE5168" "" "" "" "" "" "CE5168" "" "CE5168" "MNXM166027" "" "CE5168_c"
"MAM03368c" "MAM03368" "" "C05467" "HMDB0006891" "CHEBI:27379" "440690" "" "CE5169" "" "CE5169" "" "" "CE5169_c"
-"MAM03368m" "MAM03368" "" "C05467" "HMDB0006891" "CHEBI:27379" "440690" "" "CE5169" "" "CE5169" "" "" "CE5169_m"
-"MAM03368x" "MAM03368" "" "C05467" "HMDB0006891" "CHEBI:27379" "440690" "" "CE5169" "" "CE5169" "" "" "CE5169_p"
"MAM01428e" "MAM01428" "cdpea" "C00570" "HMDB0001564" "CHEBI:16732" "123727" "" "" "HC00433" "cdpea" "MNXM449" "" "m01428s"
"MAM00475e" "MAM00475" "12dgr120" "" "" "" "" "" "" "" "12dgr120" "MNXM4939" "" "12dgr120_s"
"MAM02171g" "MAM02171" "inost" "C00137" "HMDB0000211" "CHEBI:17268" "892" "" "" "HC00135" "inost" "MNXM127" "" "m02171g"
@@ -6137,8 +6096,8 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00687c" "MAM00687" "" "" "" "" "" "" "CE5968" "" "CE5968" "MNXM161244" "" "m00687c"
"MAM00846c" "MAM00846" "" "" "" "" "" "" "CE5966" "" "CE5966" "MNXM91381" "" "m00846c"
"MAM00691c" "MAM00691" "" "" "" "" "" "" "CE5971" "" "CE5971" "MNXM162897" "" "m00691c"
-"MAM01123m" "MAM01123" "" "" "" "" "" "" "CE2084" "" "CE7097" "MNXM162741" "" "m01123m"
-"MAM01123x" "MAM01123" "" "" "" "" "" "" "CE2084" "" "CE7097" "MNXM162741" "" "m01123p"
+"MAM01123m" "MAM01123" "" "" "" "" "" "" "CE7097" "" "CE7097" "MNXM162741" "" "m01123m"
+"MAM01123x" "MAM01123" "" "" "" "" "" "" "CE7097" "" "CE7097" "MNXM162741" "" "m01123p"
"MAM00590r" "MAM00590" "" "" "" "" "" "" "CE5815" "" "CE5815" "MNXM164163" "" "m00590r"
"MAM01040n" "MAM01040" "" "C04805" "HMDB0011134" "CHEBI:28209" "5280733" "LMFA03060002" "" "" "C04805" "MNXM38414" "" "m01040n"
"MAM01050n" "MAM01050" "" "" "" "" "5283158" "LMFA03060010" "CE7096" "" "CE7096" "MNXM164329" "" "m01050n"
@@ -6150,7 +6109,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02364n" "MAM02364" "leuktrB4" "C02165" "HMDB0001085" "CHEBI:15647" "5280492" "LMFA03020001" "" "HC02182" "leuktrB4" "MNXM162284;MNXM637" "" "m02364n"
"MAM00307n" "MAM00307" "" "" "" "" "5312983" "LMFA03060064" "CE0347" "" "CE0347" "MNXM13980;MNXM162888" "" "m00307n"
"MAM01047r" "MAM01047" "" "" "" "" "1589" "" "CE6247" "" "CE6247" "MNXM164328" "" "m01047r"
-"MAM03325c" "MAM03325" "C08276" "C08276" "HMDB0001527" "CHEBI:1438" "563" "" "" "" "C08276" "MNXM2782" "" "C08276_c"
"MAM03510c" "MAM03510" "ch4s" "" "" "" "878" "" "" "" "ch4s" "MNXM652" "" "ch4s_c"
"MAM03405c" "MAM03405" "acryl" "" "" "" "6581" "" "" "" "acryl" "MNXM1368" "" "acryl_c"
"MAM00309m" "MAM00309" "12HPET" "C05965" "HMDB0004243" "CHEBI:15626" "5280892" "LMFA03060013" "" "" "12HPET" "MNXM13989;MNXM2765" "" "m00309m"
@@ -6177,7 +6135,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02649c" "MAM02649" "" "" "" "" "53481589" "" "CE6185" "" "CE6185" "MNXM65538" "" "m02649c"
"MAM00420c" "MAM00420" "" "" "" "" "53481487" "" "CE6183" "" "CE6183" "MNXM33740" "" "m00420c"
"MAM00581c" "MAM00581" "" "" "" "" "" "" "CE6187" "" "CE6187" "MNXM35480" "" "m00581c"
-"MAM03332c" "MAM03332" "CE2516" "C03242" "HMDB0002925" "CHEBI:53486" "5280581" "" "CE2516" "" "CE2516" "MNXM5607" "" "CE2516_c"
"MAM02785n" "MAM02785" "prostge1" "C04741" "HMDB0001442" "CHEBI:15544" "5280723" "LMFA03010134" "" "HC02211" "prostge1" "MNXM162507;MNXM3344" "" "m02785n"
"MAM02793n" "MAM02793" "" "" "" "" "5283048" "" "CE6234" "" "CE6234" "MNXM78300" "" "m02793n"
"MAM00329m" "MAM00329" "" "" "" "" "53481457" "" "CE5525" "" "CE5525" "MNXM33276" "" "m00329m"
@@ -6256,7 +6213,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03489e" "MAM03489" "c10dc" "" "" "" "" "" "" "" "c10dc" "MNXM162993" "" "c10dc_s"
"MAM00181c" "MAM00181" "" "C05264" "" "CHEBI:28325" "11966158" "LMFA07050014" "" "HC01403" "3hdcoa" "MNXM674" "" "m00181c"
"MAM03204c" "MAM03204" "3deccrn" "" "" "" "" "" "" "" "3deccrn" "MNXM150909" "" "3deccrn_c"
-"MAM03540c" "MAM03540" "ddeccrn" "" "" "" "168381" "" "" "" "ddeccrn" "" "" "ddeccrn_c"
"MAM00042c" "MAM00042" "dd2coa" "C03221" "" "CHEBI:15471" "45266564" "LMFA07050010" "" "HC01078" "dd2coa" "MNXM642" "" "m00042c"
"MAM03541c" "MAM03541" "ddece1crn" "" "" "" "" "" "" "" "ddece1crn" "" "" "ddece1crn_c"
"MAM03491x" "MAM03491" "c12dccoa" "" "" "CHEBI:76315" "" "" "" "" "c12dccoa" "" "" "c12dccoa_p"
@@ -6298,8 +6254,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03250c" "MAM03250" "3octdec2crn" "" "" "" "" "" "" "" "3octdec2crn" "" "" "3octdec2crn_c"
"MAM03230c" "MAM03230" "3hodcoa" "" "" "" "49859586" "" "" "" "3hodcoa" "MNXM31746" "" "3hodcoa_c"
"MAM03251c" "MAM03251" "3octdeccrn" "" "" "" "" "" "" "" "3octdeccrn" "" "" "3octdeccrn_c"
-"MAM03494c" "MAM03494" "c3dc" "" "" "" "22833583" "" "" "" "c3dc" "" "" "c3dc_c"
-"MAM03494e" "MAM03494" "c3dc" "" "" "" "22833583" "" "" "" "c3dc" "" "" "c3dc_s"
"MAM02635e" "MAM02635" "" "C02862" "HMDB0002013" "" "439829" "LMFA07070003" "" "HC02150" "c4crn" "MNXM65151" "" "m02635s"
"MAM03495x" "MAM03495" "c4dc" "" "" "" "" "" "" "" "c4dc" "MNXM158939" "" "c4dc_p"
"MAM03495c" "MAM03495" "c4dc" "" "" "" "" "" "" "" "c4dc" "MNXM158939" "" "c4dc_c"
@@ -6324,7 +6278,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03502e" "MAM03502" "c8dc" "" "" "" "" "" "" "" "c8dc" "MNXM162999" "" "c8dc_s"
"MAM01648r" "MAM01648" "" "C01571" "HMDB0000511" "CHEBI:30813" "2969" "LMFA01010010" "" "HC02175" "dca" "MNXM1043;MNXM162295" "" "m01648r"
"MAM03202e" "MAM03202" "3ddcrn" "" "" "" "" "" "" "" "3ddcrn" "MNXM150910" "" "3ddcrn_s"
-"MAM03540e" "MAM03540" "ddeccrn" "" "" "" "168381" "" "" "" "ddeccrn" "" "" "ddeccrn_s"
"MAM03541e" "MAM03541" "ddece1crn" "" "" "" "" "" "" "" "ddece1crn" "" "" "ddece1crn_s"
"MAM03204e" "MAM03204" "3deccrn" "" "" "" "" "" "" "" "3deccrn" "MNXM150909" "" "3deccrn_s"
"MAM03544e" "MAM03544" "decdicrn" "" "" "" "53481669" "" "" "" "decdicrn" "" "" "decdicrn_s"
@@ -6500,7 +6453,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02741e" "MAM02741" "pan4p" "C01134" "" "CHEBI:16858" "987" "" "" "HC00681" "pan4p" "MNXM373" "" "m02741s"
"MAM03933e" "MAM03933" "slfcys" "C05824" "HMDB0000731" "CHEBI:27891" "115015" "" "" "" "slfcys" "MNXM2428" "" "slfcys_s"
"MAM01828e" "MAM01828" "fmn" "C00061" "HMDB0001520" "CHEBI:17621" "643976" "" "" "HC00064" "fmn" "MNXM119" "" "m01828s"
-"MAM02679e" "MAM02679" "ptth" "C00154" "HMDB0001338" "CHEBI:15525" "15667" "" "" "HC00554" "ptth" "MNXM1154" "" "m02679s"
+"MAM02679e" "MAM02679" "ptth" "C00154" "HMDB0003426" "CHEBI:16753" "439322" "" "" "HC00554" "ptth" "MNXM1154" "" "m02679s"
"MAM03102e" "MAM03102" "q10h2" "C00390" "" "CHEBI:17976" "9962735" "" "" "HC00324" "q10h2" "MNXM9200" "" "m03102s"
"MAM02439x" "MAM02439" "mal__L" "C00149" "HMDB0000156" "CHEBI:30797" "222656" "" "" "HC00146" "mal_L" "MNXM98" "" "m02439p"
"MAM03933c" "MAM03933" "slfcys" "C05824" "HMDB0000731" "CHEBI:27891" "115015" "" "" "" "slfcys" "MNXM2428" "" "slfcys_c"
@@ -6552,7 +6505,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02639e" "MAM02639" "odecrn" "" "HMDB0005065" "" "" "" "" "" "odecrn" "MNXM65475;MNXM8956" "" "m02639s"
"MAM02940e" "MAM02940" "stcrn" "" "" "" "6426855" "LMFA07070008" "" "" "stcrn" "MNXM82716;MNXM9119" "" "m02940s"
"MAM02411e" "MAM02411" "pmtcrn" "C02990" "HMDB0000222" "CHEBI:17490" "11953816" "LMFA07070004" "" "HC01034" "pmtcrn" "MNXM162587;MNXM787" "" "m02411s"
-"MAM02676e" "MAM02676" "hdcecrn" "" "" "" "11953816" "" "" "HC10854" "hdcecrn" "MNXM8716" "" "m02676s"
+"MAM02676e" "MAM02676" "hdcecrn" "" "" "" "129849228" "" "" "HC10854" "hdcecrn" "MNXM8716" "" "m02676s"
"MAM01620e" "MAM01620" "pcreat" "C02305" "" "CHEBI:58092" "9548602" "" "" "" "pcreat" "MNXM819;MNXM90130;MNXM91273" "" "m01620s"
"MAM01580e" "MAM01580" "" "C00417" "" "CHEBI:32805" "309" "" "" "HC00342" "HC00342" "MNXM162425;MNXM813" "" "m01580s"
"MAM01372e" "MAM01372" "" "C08261" "HMDB0000784" "CHEBI:48131" "2266" "LMFA01170054" "" "" "C08261" "MNXM164574" "" "m01372s"
@@ -6717,7 +6670,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM00784e" "MAM00784" "3hmp" "C06001" "HMDB0000023" "CHEBI:37373" "440873" "" "" "HC00705" "3hmp" "MNXM396" "" "m00784s"
"MAM03234c" "MAM03234" "3hpppnohgluc" "" "" "" "" "" "" "" "3hpppnohgluc" "" "" "3hpppnohgluc_c"
"MAM03234e" "MAM03234" "3hpppnohgluc" "" "" "" "" "" "" "" "3hpppnohgluc" "" "" "3hpppnohgluc_s"
-"MAM03232c" "MAM03232" "3hpppn" "" "" "CHEBI:57277" "" "" "" "" "3hpppn" "MNXM1634" "" "3hpppn_c"
+"MAM03232c" "MAM03232" "3hpppn" "" "" "CHEBI:57277" "" "" "" "" "3hpppn" "MNXM1634" "" "3hpppn_c;MAM03231c"
"MAM03233c" "MAM03233" "3hpppnoh" "" "" "" "" "" "" "" "3hpppnoh" "" "" "3hpppnoh_c"
"MAM02142e" "MAM02142" "3hpp" "C01013" "HMDB0000700" "CHEBI:33404" "68152" "" "" "HC00625" "3hpp" "MNXM872" "" "m02142s"
"MAM03247e" "MAM03247" "3mhis" "" "" "CHEBI:70959" "" "" "" "" "3mhis" "" "" "3mhis_s"
@@ -6774,7 +6727,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM01392e" "MAM01392" "" "" "HMDB0000754" "CHEBI:37084" "69362" "" "CE2028" "" "CE2028" "MNXM36533" "" "m01392s"
"MAM00830e" "MAM00830" "" "" "HMDB0001434" "" "1670" "" "CE2176" "" "CE2176" "MNXM10073" "" "m00830s"
"MAM01172e" "MAM01172" "" "" "HMDB0005087" "CHEBI:63981" "5283128" "LMFA03020013" "CE2445" "" "CE2445" "MNXM48977" "" "m01172s"
-"MAM03332e" "MAM03332" "" "C03242" "HMDB0002925" "CHEBI:53486" "5280581" "" "CE2516" "" "CE2516" "" "" "CE2516_s"
"MAM00378e" "MAM00378" "" "" "" "" "1437" "LMFA03050007" "CE2537" "" "CE2537" "MNXM165539;MNXM33401" "" "m00378s"
"MAM03569e" "MAM03569" "eidi1114ac" "C16525" "HMDB0005060" "CHEBI:603631" "6439848" "" "" "" "eidi1114ac" "" "" "eidi1114ac_s"
"MAM00384e" "MAM00384" "" "" "" "" "5283052" "" "CE5304" "" "CE5304" "MNXM33412" "" "m00384s"
@@ -6881,7 +6833,6 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM03215e" "MAM03215" "3hcinnm" "" "" "" "" "" "" "" "3hcinnm" "MNXM1799" "" "3hcinnm_s"
"MAM03215c" "MAM03215" "3hcinnm" "" "" "" "" "" "" "" "3hcinnm" "MNXM1799" "" "3hcinnm_c"
"MAM03231e" "MAM03231" "" "" "" "" "" "" "" "" "3hppa" "" "" "3hppa_s"
-"MAM03231c" "MAM03231" "" "" "" "CHEBI:57277" "" "" "" "" "3hppa" "" "" "3hppa_c"
"MAM02622e" "MAM02622" "normete__L" "C05589" "HMDB0000819" "CHEBI:144308" "1237" "" "" "" "normete_L" "MNXM3674" "" "m02622s"
"MAM00400e" "MAM00400" "" "C05300" "HMDB0000335" "CHEBI:776" "115116" "LMST02010041" "" "" "C05300" "MNXM3794" "" "m00400s"
"MAM01698e" "MAM01698" "dhbpt" "C00268" "" "" "1879" "" "" "HC00242" "dhbpt" "MNXM162257;MNXM90267" "" "m01698s"
@@ -8444,4 +8395,66 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM20060c" "MAM20060" "" "" "" "CHEBI:139347" "" "" "" "" "" "MNXM745787" "" ""
"MAM20061c" "MAM20061" "" "C21730" "" "CHEBI:133752" "" "" "" "" "" "MNXM52422" "" ""
"MAM20061n" "MAM20061" "" "C21730" "" "CHEBI:133752" "" "" "" "" "" "MNXM52422" "" ""
-"MAM01127n" "MAM01127" "5oxpro" "C01879" "HMDB0000267" "CHEBI:18183" "7405" "" "" "HC00856" "5oxpro" "MNXM964" "" ""
+"MAM01127n" "MAM01127" "" "C01879" "" "CHEBI:18183" "" "" "" "" "" "MNXM964" "" ""
+"MAM20071r" "MAM20071" "" "" "" "CHEBI:85206" "" "" "" "" "" "MNXM147177" "" ""
+"MAM01362g" "MAM01362" "" "" "" "CHEBI:32395" "" "" "" "" "" "MNXM1107770" "" ""
+"MAM20071g" "MAM20071" "" "" "" "CHEBI:85206" "" "" "" "" "" "MNXM147177" "" ""
+"MAM20070r" "MAM20070" "" "" "" "CHEBI:85207" "" "" "" "" "" "MNXM147175" "" ""
+"MAM20070g" "MAM20070" "" "" "" "CHEBI:85207" "" "" "" "" "" "MNXM147175" "" ""
+"MAM20068r" "MAM20068" "" "" "" "CHEBI:85284" "" "" "" "" "" "MNXM147168" "" ""
+"MAM01584g" "MAM01584" "" "" "" "CHEBI:32426" "" "" "" "" "" "MNXM1107952" "" ""
+"MAM20068g" "MAM20068" "" "" "" "CHEBI:85284" "" "" "" "" "" "MNXM147168" "" ""
+"MAM20069r" "MAM20069" "" "" "" "CHEBI:85285" "" "" "" "" "" "MNXM147169" "" ""
+"MAM20069g" "MAM20069" "" "" "" "CHEBI:85285" "" "" "" "" "" "MNXM147169" "" ""
+"MAM20067r" "MAM20067" "" "" "" "CHEBI:85286" "" "" "" "" "" "MNXM147167" "" ""
+"MAM20067g" "MAM20067" "" "" "" "CHEBI:85286" "" "" "" "" "" "MNXM147167" "" ""
+"MAM20073r" "MAM20073" "" "" "" "CHEBI:77996" "" "" "" "" "" "MNXM46121" "" ""
+"MAM20073g" "MAM20073" "" "" "" "CHEBI:77996" "" "" "" "" "" "MNXM46121" "" ""
+"MAM01778g" "MAM01778" "" "C00712" "" "CHEBI:30823" "" "" "" "" "" "MNXM1107708" "" ""
+"MAM20074r" "MAM20074" "" "" "" "CHEBI:74100" "" "" "" "" "" "MNXM46086" "" ""
+"MAM20074g" "MAM20074" "" "" "" "CHEBI:74100" "" "" "" "" "" "MNXM46086" "" ""
+"MAM20072r" "MAM20072" "" "" "" "CHEBI:85204" "" "" "" "" "" "MNXM147178" "" ""
+"MAM20072g" "MAM20072" "" "" "" "CHEBI:85204" "" "" "" "" "" "MNXM147178" "" ""
+"MAM01806m" "MAM01806" "" "" "" "CHEBI:175763" "" "" "" "" "" "MNXM1103344" "" ""
+"MAM20064m" "MAM20064" "" "" "" "CHEBI:60530" "" "" "" "" "" "MNXM1107744" "" ""
+"MAM20064c" "MAM20064" "" "" "" "CHEBI:60530" "" "" "" "" "" "MNXM1107744" "" ""
+"MAM01806n" "MAM01806" "" "" "" "CHEBI:175763" "" "" "" "" "" "MNXM1103344" "" ""
+"MAM02049n" "MAM02049" "" "" "" "CHEBI:60344" "" "" "" "" "" "MNXM249" "" ""
+"MAM20064n" "MAM20064" "" "" "" "CHEBI:60530" "" "" "" "" "" "MNXM1107744" "" ""
+"MAM03652c" "MAM03652" "" "" "" "CHEBI:71464" "" "" "" "" "" "MNXM107548" "" ""
+"MAM03550c" "MAM03550" "" "" "" "CHEBI:85263" "" "" "" "" "" "MNXM59819" "" ""
+"MAM03977c" "MAM03977" "" "" "" "CHEBI:85262" "" "" "" "" "" "MNXM62840" "" ""
+"MAM20076n" "MAM20076" "" "" "" "CHEBI:72959" "" "" "" "" "" "MNXM731444" "" ""
+"MAM20075c" "MAM20075" "" "" "" "CHEBI:72956" "" "" "" "" "" "MNXM46112" "" ""
+"MAM01657r" "MAM01657" "" "C05859" "" "CHEBI:136960" "" "" "" "" "" "MNXM1137698" "" ""
+"MAM01252n" "MAM01252" "" "" "" "CHEBI:30089" "" "" "" "" "" "MNXM26" "" ""
+"MAM01288n" "MAM01288" "" "" "" "CHEBI:57967" "" "" "" "" "" "MNXM1104545" "" ""
+"MAM20077n" "MAM20077" "" "" "" "CHEBI:83767" "" "" "" "" "" "MNXM732228" "" ""
+"MAM02583n" "MAM02583" "" "" "" "CHEBI:17154" "" "" "" "" "" "MNXM216" "" ""
+"MAM20063n" "MAM20063" "" "" "" "CHEBI:77017" "" "" "" "" "" "MNXM166986" "" ""
+"MAM20062n" "MAM20062" "" "" "" "CHEBI:142723" "" "" "" "" "" "MNXM117128" "" ""
+"MAM20066c" "MAM20066" "" "" "" "CHEBI:193091" "" "" "" "" "" "MNXM819046" "" ""
+"MAM20065c" "MAM20065" "" "" "" "CHEBI:6746" "" "" "" "" "" "MNXM3658" "" ""
+"MAM20066r" "MAM20066" "" "" "" "CHEBI:193091" "" "" "" "" "" "MNXM819046" "" ""
+"MAM03590r" "MAM03590" "" "" "" "CHEBI:58756" "" "" "" "" "" "MNXM728266" "" ""
+"MAM20065r" "MAM20065" "" "" "" "CHEBI:6746" "" "" "" "" "" "MNXM3658" "" ""
+"MAM20066g" "MAM20066" "" "" "" "CHEBI:193091" "" "" "" "" "" "MNXM819046" "" ""
+"MAM02759g" "MAM02759" "" "" "" "CHEBI:33019" "" "" "" "" "" "MNXM11" "" ""
+"MAM03590g" "MAM03590" "" "" "" "CHEBI:58756" "" "" "" "" "" "MNXM728266" "" ""
+"MAM20065g" "MAM20065" "" "" "" "CHEBI:6746" "" "" "" "" "" "MNXM3658" "" ""
+"MAM20066n" "MAM20066" "" "" "" "CHEBI:193091" "" "" "" "" "" "MNXM819046" "" ""
+"MAM03590n" "MAM03590" "" "" "" "CHEBI:58756" "" "" "" "" "" "MNXM728266" "" ""
+"MAM20065n" "MAM20065" "" "" "" "CHEBI:6746" "" "" "" "" "" "MNXM3658" "" ""
+"MAM00767c" "MAM00767" "" "" "" "CHEBI:84503" "" "" "" "" "" "MNXM733937" "" ""
+"MAM00995r" "MAM00995" "" "" "" "CHEBI:17879" "" "" "" "" "" "MNXM164" "" ""
+"MAM01316r" "MAM01316" "" "" "" "CHEBI:60721" "" "" "" "" "" "MNXM731626" "" ""
+"MAM00767r" "MAM00767" "" "" "" "CHEBI:84503" "" "" "" "" "" "MNXM733937" "" ""
+"MAM00995g" "MAM00995" "" "" "" "CHEBI:17879" "" "" "" "" "" "MNXM164" "" ""
+"MAM01316g" "MAM01316" "" "" "" "CHEBI:60721" "" "" "" "" "" "MNXM731626" "" ""
+"MAM00767g" "MAM00767" "" "" "" "CHEBI:84503" "" "" "" "" "" "MNXM733937" "" ""
+"MAM00995n" "MAM00995" "" "" "" "CHEBI:17879" "" "" "" "" "" "MNXM164" "" ""
+"MAM01316n" "MAM01316" "" "" "" "CHEBI:60721" "" "" "" "" "" "MNXM731626" "" ""
+"MAM00767n" "MAM00767" "" "" "" "CHEBI:84503" "" "" "" "" "" "MNXM733937" "" ""
+"MAM01435m" "MAM01435" "" "C02528" "HMDB0000518" "CHEBI:16755" "10133" "LMST04010032" "" "HC00958" "HC00958" "MNXM1183" "" "MAM03318m"
+"MAM01729e" "MAM01729" "" "" "HMDB0002250" "" "168381" "" "" "" "M01729" "MNXM51468;MNXM588354" "" "MAM03540e"
+"MAM00853c" "MAM00853" "" "" "" "" "" "" "CE4820" "" "CE4820" "MNXM164259" "" ";MAM00902c"
diff --git a/model/reactions.tsv b/model/reactions.tsv
index 49f0fd69..9e530a10 100644
--- a/model/reactions.tsv
+++ b/model/reactions.tsv
@@ -27,7 +27,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04391" "R01015" "TPI" "R01015C" "r0243" "" "TPI" "MNXR104918" "HMR_4391" "RCR14186" "" 0 "" "RHEA:18585" "HMR_4391"
"MAR04394" "R00299" "HEX1" "" "r0353" "" "HEX1" "MNXR100612" "HMR_4394" "RCR10145" "" 0 "" "RHEA:17825" "HMR_4394"
"MAR04396" "R08639" "PGMT" "R00959C" "r0621" "" "PGMT" "MNXR102528;MNXR102548" "HMR_4396" "RCR10146" "" 0 "" "" "HMR_4396"
-"MAR04521" "R00303" "G6PPer" "" "r0396" "" "G6PPer" "MNXR99912" "HMR_4521" "RCR11028" "" 0 "" "RHEA:16689" "HMR_4521"
+"MAR04521" "R00303" "G6PPer;G6PP;R_G6PP;R_G6PPer" "" "r0396" "" "G6PPer" "MNXR99912;MNXR195425" "HMR_4521" "RCR11028" "" 0 "" "RHEA:16689" "HMR_4521;MAR20020"
"MAR06412" "R02569" "" "R02569C" "r0555" "" "r0555" "MNXR102430;MNXR107584" "HMR_6412" "RCR14187" "" 0 "" "RHEA:17017" "HMR_6412"
"MAR07745" "R01602" "" "" "" "" "HMR_7745" "MNXR107082" "HMR_7745" "RCR10447" "" 0 "RHEA:10267" "RHEA:10264" "HMR_7745"
"MAR07747" "R09086" "" "" "" "" "HMR_7747" "MNXR112530" "HMR_7747" "RCR10449" "" 0 "RHEA:11460" "RHEA:11461" "HMR_7747"
@@ -158,7 +158,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR08517" "R01016" "MGSA2" "" "" "" "MGSA2" "MNXR101551;MNXR101552" "HMR_8517" "RCR11086" "" 0 "" "RHEA:17937" "HMR_8517"
"MAR04280" "R00703" "LDH_Lm" "R00703C" "r0172" "" "LDH_Lm" "MNXR101040" "HMR_4280" "RCR11087" "" 0 "" "RHEA:23444" "HMR_4280"
"MAR00153" "R00925" "ACS2" "" "r0218" "" "ACS2" "MNXR106753;MNXR95222" "HMR_0153" "RCR10460" "" 0 "RHEA:20374" "RHEA:20373" "HMR_0153"
-"MAR03212" "R00924" "PPCOAOm" "" "" "" "PPCOAOm" "MNXR103101" "HMR_3212" "RCR11088" "" 0 "" "" "HMR_3212"
+"MAR03212" "R00924" "PPCOAOm" "" "r0683" "" "PPCOAOm;r0683" "MNXR103101" "HMR_3212;HMR_3211" "RCR11088;RCR14348" "" 0 "" "" "HMR_3212;MAR03211"
"MAR03797" "R00925" "ACCOALm" "" "r0219" "" "ACCOALm" "MNXR106753;MNXR95222" "HMR_3797" "RCR14211" "" 0 "RHEA:20376" "RHEA:20373" "HMR_3797"
"MAR03800" "" "OBDHm" "" "r1154" "" "r1154" "MNXR102133" "HMR_3800" "RCR10461" "" 0 "" "" "HMR_3800"
"MAR04105" "R00233" "MCD" "" "r0063" "" "MCD" "MNXR101412" "HMR_4105" "RCR10285" "" 0 "RHEA:18782" "RHEA:18781" "HMR_4105"
@@ -363,7 +363,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04672" "R02325" "" "" "" "" "HMR_4672" "" "HMR_4672" "RCR10128" "" 0 "" "RHEA:22680" "HMR_4672"
"MAR04676" "R02372" "" "R02372E" "r0531" "" "r0531" "MNXR97821" "HMR_4676" "RCR11173" "" 0 "" "" "HMR_4676"
"MAR04736" "R03055" "DHPM2" "R03055C" "r0593" "" "DHPM2" "MNXR107917;MNXR97433" "HMR_4736" "RCR11174" "" 0 "" "" "HMR_4736"
-"MAR04819" "R04666" "BUP2" "R04666C" "r0710" "" "" "MNXR109033;MNXR96346" "HMR_4819" "RCR11175" "" 0 "" "" "HMR_4819"
+"MAR04819" "R04666" "BUP2" "R04666C" "r0710" "" "BUP2" "MNXR109033;MNXR96346" "HMR_4819" "RCR11175" "" 0 "" "" "HMR_4819;BUP2;MAR00096"
"MAR05299" "R00964" "URIK1" "R00964E" "r1115" "" "URIK1" "MNXR105162" "HMR_5299" "RCR11176" "" 0 "RHEA:16826" "RHEA:16825" "HMR_5299"
"MAR05352" "R02332" "" "R02332E" "r1156" "" "r1156" "MNXR97823" "HMR_5352" "RCR11177" "" 0 "" "" "HMR_5352"
"MAR05415" "R02017" "" "R02018M" "r1431" "" "" "MNXR104066" "HMR_5415" "RCR11178" "" 0 "" "RHEA:28034" "HMR_5415"
@@ -492,7 +492,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR08479" "" "DCMPDA" "" "" "" "DCK2n" "MNXR97185" "HMR_8479" "RCR10303" "" 0 "" "" "HMR_8479"
"MAR08480" "R02485" "DCYTt" "" "" "" "DCYTDn" "MNXR97208" "HMR_8480" "RCR10304" "" 0 "" "RHEA:13433" "HMR_8480"
"MAR08481" "" "DGSNtm" "" "" "" "DGK2m" "MNXR97324" "HMR_8481" "RCR11232" "" 0 "" "" "HMR_8481"
-"MAR08482" "R02016" "TRDRm" "" "" "" "TRDRm" "MNXR104766" "HMR_8482" "RCR11233" "" 0 "" "RHEA:20345" "HMR_8482"
+"MAR08482" "R02016" "TRDRm" "" "" "" "TRDRm;r1433" "MNXR104766" "HMR_8482" "RCR11233" "" 0 "" "RHEA:20345" "HMR_8482;MAR02358"
"MAR08483" "R02100" "EBASTINEOHte" "" "" "" "DUTPDPn" "MNXR97869" "HMR_8483" "RCR14276" "" 0 "RHEA:10249" "RHEA:10248" "HMR_8483"
"MAR08484" "R01131" "INSKm" "" "" "" "INSKm" "MNXR100845" "HMR_8484" "RCR11234" "" 0 "RHEA:21141" "RHEA:21140" "HMR_8484"
"MAR08485" "R00155" "NDP7g" "" "" "" "NDP7g" "MNXR101931" "HMR_8485" "RCR11235" "" 0 "RHEA:64877" "RHEA:64876" "HMR_8485"
@@ -513,7 +513,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR03862" "R00485" "ASNNm" "" "" "" "ASNNm" "MNXR96056" "HMR_3862" "RCR10305" "" 0 "" "RHEA:21016" "HMR_3862"
"MAR03865" "R02619" "3SALATAim" "" "" "" "3SALATAim" "" "HMR_3865" "RCR11245" "" 0 "" "RHEA:70295" "HMR_3865"
"MAR03870" "R00115" "GTHOm" "R00115C" "r0026" "" "GTHOm" "MNXR100098" "HMR_3870" "RCR11246" "" 0 "RHEA:11742" "RHEA:11740" "HMR_3870"
-"MAR03873" "R00149" "CPS" "R00149M" "r0034" "" "" "MNXR96884" "HMR_3873" "RCR10504" "" 0 "" "" "HMR_3873"
+"MAR03873" "R00149" "CPS;CPS_m" "R00149M" "r0034" "" "r0034" "MNXR96884" "HMR_3873" "RCR10504" "" 0 "" "" "HMR_3873;r0034;MAR02006"
"MAR08654" "" "CBPter" "" "" "" "CBPSam" "MNXR96487" "HMR_8654" "RCR10505" "" 0 "" "" "HMR_8654"
"MAR03890" "R00253" "GLNS" "R00253C" "r0077" "" "GLNS" "MNXR100024" "HMR_3890" "RCR10506" "" 0 "" "RHEA:16169" "HMR_3890"
"MAR03892" "R00256" "GLUNm" "R00256M" "r0078" "" "GLUNm" "MNXR100030" "HMR_3892" "RCR11247" "" 0 "RHEA:15890" "RHEA:15889" "HMR_3892"
@@ -550,7 +550,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR03833" "R01251" "P5CR" "R01251C" "r0305" "" "P5CR" "MNXR102302" "HMR_3833" "RCR11261" "" 0 "" "RHEA:14109" "HMR_3833"
"MAR03835" "R01248" "PRO1xm" "R01248C" "r0304" "" "PRO1x" "MNXR102303" "HMR_3835" "RCR10307" "" 0 "" "RHEA:14105" "HMR_3835"
"MAR03837" "R01248" "PRO1xm" "" "" "" "P5CRxm;PRO1xm" "MNXR102303" "HMR_3837" "RCR10308" "" 0 "" "RHEA:14105" "HMR_3837"
-"MAR03838" "" "" "" "r1453" "" "" "" "HMR_3838" "RCR14286" "" 0 "" "" "HMR_3838"
"MAR03895" "R00239" "GLU5Km" "R00239C" "r0072" "" "GLU5Km" "MNXR100277" "HMR_3895" "RCR11262" "" 0 "" "RHEA:14877" "HMR_3895"
"MAR03897" "R03313" "G5SDym" "R03313C" "r0619" "" "G5SDym" "MNXR99896" "HMR_3897" "RCR14287" "" 0 "" "RHEA:19541" "HMR_3897"
"MAR03956" "R10092" "HCO3Em" "" "" "" "H2CO3Dm" "MNXR100482" "HMR_3956" "RCR10097" "" 0 "RHEA:10750" "RHEA:10748" "HMR_3956"
@@ -635,17 +634,17 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR08608" "R02894" "DRIBt" "" "" "" "HMR_8608" "MNXR97783" "HMR_8608" "RCR14308" "" 0 "" "" "HMR_8608"
"MAR08609" "R01251" "P5CRm" "" "" "" "P5CRm" "MNXR102302" "HMR_8609" "RCR10244" "" 0 "" "RHEA:14109" "HMR_8609"
"MAR08610" "R10507" "PROD2" "" "" "" "PROD2" "MNXR103187" "HMR_8610" "RCR10316" "" 0 "" "" "HMR_8610"
-"MAR08611" "R10507" "PROD2m" "" "" "" "PROD2m" "MNXR103187" "HMR_8611" "RCR11294" "" 0 "" "" "HMR_8611"
+"MAR08611" "R10507" "PROD2m" "" "r1453" "" "PROD2m" "MNXR103187" "HMR_8611;HMR_3838" "RCR11294;RCR14286" "" 0 "" "" "HMR_8611;HMR_3838;MAR03838"
"MAR04285" "R00713" "" "R00713C" "r0178" "" "r0178" "MNXR104540" "HMR_4285" "RCR11295" "" 0 "RHEA:13218" "RHEA:13217" "HMR_4285"
"MAR00457" "R01514" "" "R01514C" "r0339" "" "r0339" "MNXR100328" "HMR_0457" "RCR11296" "" 0 "RHEA:23517" "RHEA:23516" "HMR_0457"
"MAR00460" "R01514" "" "R01514C" "r0340" "" "r0340" "MNXR100328" "HMR_0460" "RCR11297" "" 0 "RHEA:23517" "RHEA:23516" "HMR_0460"
"MAR03750" "" "" "RE2429M" "" "" "RE2429M" "MNXR103672" "HMR_3750" "RCR14309" "" 0 "" "" "HMR_3750"
-"MAR03752" "" "ACOAD9m" "" "" "" "ACOAD9m" "" "HMR_3752" "RCR14310" "" 0 "" "" "HMR_3752"
-"MAR03770" "R04095" "ACOAD8m" "" "" "" "ACOAD8m" "" "HMR_3770" "RCR14311" "" 0 "" "" "HMR_3770"
+"MAR03752" "R02660" "ACOAD9m" "R02660M" "r0560" "" "ACOAD9m;r0560" "" "HMR_3752;HMR_3751" "RCR14310;RCR14421" "" 0 "" "" "HMR_3752;HMR_3751;MAR03751"
+"MAR03770" "R04095" "ACOAD8m" "R04095M" "r0655" "" "ACOAD8m;r0655" "MNXR95318" "HMR_3770;HMR_3769" "RCR14311;RCR14423" "" 0 "" "" "HMR_3770;HMR_3769;MAR03769"
"MAR03771" "" "" "RE2427M" "" "" "RE2427M" "MNXR103670" "HMR_3771" "RCR14312" "" 0 "" "" "HMR_3771"
"MAR03772" "" "" "RE2111M" "" "" "RE2111M" "MNXR103609" "HMR_3772" "RCR14313" "" 0 "" "" "HMR_3772"
"MAR03782" "" "" "RE2428M" "" "" "RE2428M" "MNXR103671" "HMR_3782" "RCR14314" "" 0 "" "" "HMR_3782"
-"MAR03784" "" "ACOAD10m" "" "" "" "ACOAD10m" "" "HMR_3784" "RCR11298" "" 0 "" "" "HMR_3784"
+"MAR03784" "R03172" "ACOAD10m" "R03172M" "r0603" "" "ACOAD10m;r0603" "MNXR108000" "HMR_3784;HMR_3783" "RCR11298;RCR14424" "" 0 "" "" "HMR_3784;HMR_3783;MAR03783"
"MAR03794" "" "" "RE2031M" "" "" "RE2031M" "MNXR103592" "HMR_3794" "RCR14315" "" 0 "" "" "HMR_3794"
"MAR03839" "R01513" "PGCD" "R01513C" "r0338" "" "PGCD" "MNXR102527" "HMR_3839" "RCR11299" "" 0 "" "RHEA:12641" "HMR_3839"
"MAR03841" "R04173" "PSERT" "R04173C" "r0663" "" "PSERT" "MNXR103225" "HMR_3841" "RCR11300" "" 0 "" "RHEA:14329" "HMR_3841"
@@ -729,7 +728,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR06978" "R04313" "" "" "" "" "HMR_6978" "MNXR108803" "HMR_6978" "RCR11341" "" 0 "" "" "HMR_6978"
"MAR06979" "R03451" "" "" "" "" "TMLYSOX" "MNXR108181" "HMR_6979" "RCR11342" "" 0 "" "RHEA:14181" "HMR_6979"
"MAR06980" "" "GHMT3m" "" "" "" "GHMT3" "MNXR100143" "HMR_6980" "RCR11343" "" 0 "" "" "HMR_6980"
-"MAR06981" "R03283" "" "" "" "" "TMABADH" "MNXR108074" "HMR_6981" "RCR11344" "" 0 "" "RHEA:17985" "HMR_6981"
+"MAR06981" "R03283" "R_TMABADH;TMABADH" "" "" "" "TMABADH" "MNXR108074;MNXR104876" "HMR_6981" "RCR11344" "" 0 "" "RHEA:17985" "HMR_6981"
"MAR06982" "R02397" "" "" "" "" "BBHOX" "MNXR96215" "HMR_6982" "RCR10528" "" 0 "" "RHEA:24028" "HMR_6982"
"MAR06983" "R03376" "" "" "" "" "HMR_6983;PCLYSOX" "MNXR102412" "HMR_6983" "RCR14334" "" 0 "" "RHEA:16569" "HMR_6983"
"MAR06984" "R03380" "" "" "" "" "HMR_6984" "MNXR108131" "HMR_6984" "RCR14335" "" 0 "" "RHEA:12637" "HMR_6984"
@@ -749,8 +748,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR08091" "" "3HXKYNDCL" "" "" "" "3HXKYNDCL" "MNXR94906" "HMR_8091" "RCR11354" "" 0 "" "" "HMR_8091"
"MAR08092" "R04907" "3HXKYNOXDA" "" "" "" "3HXKYNOXDA" "MNXR94907" "HMR_8092" "RCR11355" "" 0 "" "" "HMR_8092"
"MAR08563" "R02678" "ALDD20xm" "" "" "" "ALDD20xm" "MNXR95744" "HMR_8563" "RCR10320" "" 0 "" "RHEA:30867" "HMR_8563"
-"MAR08564" "" "KYNAKGAT" "" "" "" "KYNAKGAT" "MNXR100948" "HMR_8564" "RCR11356" "" 0 "" "" "HMR_8564"
-"MAR08565" "R03445" "KYNATESYN" "" "" "" "KYNATESYN" "MNXR100949" "HMR_8565" "RCR11357" "" 0 "" "RHEA:42452" "HMR_8565"
"MAR08566" "" "MELATNOX" "" "" "" "MELATNOX" "MNXR101458" "HMR_8566" "RCR11358" "" 0 "" "" "HMR_8566"
"MAR03935" "R06982" "r1377" "" "r1377" "" "r1377" "MNXR105462;MNXR99239" "HMR_3935" "RCR11359" "" 0 "" "RHEA:22488" "HMR_3935"
"MAR04681" "R00699" "" "" "" "" "PHYCBOXL" "MNXR102650" "HMR_4681" "RCR10321" "" 0 "" "RHEA:19717" "HMR_4681"
@@ -766,7 +763,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR07689" "" "DOPASULT" "" "" "" "DOPASULT" "MNXR97755" "HMR_7689" "RCR14340" "" 0 "" "" "HMR_7689"
"MAR07701" "R07172" "H2O2syn" "" "" "" "H2O2syn" "MNXR100492" "HMR_7701" "RCR11365" "" 0 "RHEA:11261" "RHEA:11260" "HMR_7701"
"MAR08094" "" "NRPPHRSULT" "" "" "" "NRPPHRSULT" "MNXR102016" "HMR_8094" "RCR11366" "" 0 "" "" "HMR_8094"
-"MAR08529" "R06154" "MAOX" "" "" "" "" "MNXR101406" "HMR_8529" "RCR14341" "" 0 "" "RHEA:59420" "HMR_8529"
+"MAR08529" "R06154" "MAOX" "" "" "" "MAOX" "MNXR101406" "HMR_8529" "RCR14341" "" 0 "RHEA:59421" "RHEA:59420" "HMR_8529;MAOX;MAR01515"
"MAR08530" "" "FALDtm" "" "" "" "FALDH" "MNXR99238" "HMR_8530" "RCR14342" "" 0 "" "" "HMR_8530"
"MAR08533" "" "DOPAQNISO1" "" "" "" "DOPACHRMISO" "MNXR97753" "HMR_8533" "RCR10532" "" 0 "" "" "HMR_8533"
"MAR08534" "" "TRIODTHYSULT" "" "" "" "TRIODTHYSULT" "MNXR104937" "HMR_8534" "RCR10322" "" 0 "" "" "HMR_8534"
@@ -778,11 +775,8 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR08544" "" "IDHPOXOXb" "" "" "" "IDHPOXOXb" "MNXR100795" "HMR_8544" "RCR14344" "" 0 "" "" "HMR_8544"
"MAR08630" "" "T4HCINNOX" "" "" "" "T4HCINNOX" "MNXR104663" "HMR_8630" "RCR14345" "" 0 "" "" "HMR_8630"
"MAR08540" "" "TYRASE" "" "" "" "HMR_8540" "MNXR104987" "HMR_8540" "RCR11371" "" 0 "" "" "HMR_8540"
-"MAR09733" "R03674" "" "" "" "" "HMR_9733" "MNXR108330" "HMR_9733" "RCR14346" "" 0 "" "" "HMR_9733"
-"MAR09734" "R04884" "" "" "" "" "HMR_9734" "MNXR109190" "HMR_9734" "RCR14347" "" 0 "RHEA:33516" "RHEA:33515" "HMR_9734"
"MAR03206" "R00927" "ACACT10m" "R00927M" "r0222" "" "ACACT10m" "MNXR95195" "HMR_3206" "RCR11372" "" 0 "" "RHEA:30719" "HMR_3206"
"MAR03208" "R01859" "PPCOACm" "R01859C" "r0414" "" "PPCOACm" "MNXR103100" "HMR_3208" "RCR11373" "" 0 "RHEA:23721" "RHEA:23720" "HMR_3208"
-"MAR03211" "R00924" "" "" "r0683" "" "r0683" "MNXR103101" "HMR_3211" "RCR14348" "" 0 "" "" "HMR_3211"
"MAR03213" "R02765" "MMEm" "R02765M" "r0572" "" "MMEm" "MNXR101657" "HMR_3213" "RCR11374" "" 0 "RHEA:20555" "RHEA:20553" "HMR_3213"
"MAR03215" "R00833" "MMMm" "R00833M" "r0197" "" "MMMm" "MNXR101661" "HMR_3215" "RCR11375" "" 0 "RHEA:22889" "RHEA:22888" "HMR_3215"
"MAR03747" "R01214" "VALTA" "" "" "" "VALTA" "MNXR96230" "HMR_3747" "RCR11376" "" 0 "" "RHEA:24813" "HMR_3747"
@@ -796,8 +790,8 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR06417" "R02662" "" "RE3326M" "r0561" "" "RE3326M;r0561" "MNXR107649;MNXR97451" "HMR_6417" "RCR14349" "" 0 "" "RHEA:18865" "HMR_6417"
"MAR06419" "R04225" "" "R04225C" "r0670" "" "r0670" "MNXR108745;MNXR94911" "HMR_6419" "RCR11381" "" 0 "" "" "HMR_6419"
"MAR06420" "R03174" "" "" "r0604" "" "r0604" "MNXR108002;MNXR97450" "HMR_6420" "RCR14350" "" 0 "" "" "HMR_6420"
-"MAR06421" "R01702" "" "R01702C" "r0386" "" "r0386" "MNXR107132;MNXR95029" "HMR_6421" "RCR11382" "" 0 "" "" "HMR_6421"
-"MAR06422" "R04097" "" "" "r0656" "" "r0656" "MNXR108654;MNXR97452" "HMR_6422" "RCR14351" "" 0 "" "" "HMR_6422"
+"MAR06421" "R01702;R01651" "OIVD1m" "R01702C;R03171M" "r0386;r0601" "" "r0386;OIVD1m" "MNXR107132;MNXR95029;MNXR102172;MNXR107999" "HMR_6421;HMR_3767" "RCR11382;RCR14422" "" 0 "" "RHEA:25177" "HMR_6421;HMR_3767;MAR03767_1"
+"MAR06422" "R04097;R01651" "OIVD1m" "R0317M" "r0656;r0601" "" "r0656;OIVD1m" "MNXR108654;MNXR97452;MNXR102172;MNXR107999" "HMR_6422;HMR_3767" "RCR14351;RCR14422" "" 0 "" "RHEA:25177" "HMR_6422;MAR03767_2"
"MAR06923" "R01090" "LEUTA" "" "" "" "LEUTA" "MNXR96229" "HMR_6923" "RCR10325" "" 0 "" "RHEA:18321" "HMR_6923"
"MAR03765" "R01090" "LEUTAm" "R01090C" "r0262" "" "LEUTAm" "MNXR96229" "HMR_3765" "RCR11383" "" 0 "" "RHEA:18321" "HMR_3765"
"MAR06924" "" "" "RE1266C" "" "" "RE1266C" "MNXR103504" "HMR_6924" "RCR14352" "" 0 "" "" "HMR_6924"
@@ -807,13 +801,12 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR08088" "R04188" "3AIBTm" "" "" "" "3AIBTm" "MNXR108721;MNXR94851" "HMR_8088" "RCR11385" "" 0 "" "RHEA:13993" "HMR_8088"
"MAR08787" "R00923" "MMCDm" "" "" "" "MMCDm" "MNXR101656" "HMR_8787" "RCR11386" "" 0 "" "RHEA:21396" "HMR_8787"
"MAR03743" "" "" "RE2117M" "" "" "RE2117M" "MNXR103611" "HMR_3743" "RCR11387" "" 0 "" "" "HMR_3743"
-"MAR03940" "R01795" "PHETHPTOX" "R01795C" "r0399" "" "r0399" "MNXR102632;MNXR107174" "HMR_3940" "RCR11388" "" 0 "" "RHEA:30787" "HMR_3940"
"MAR04214" "R00678" "TRPO2" "R00678C" "r0169" "" "TRPO2" "MNXR104944" "HMR_4214" "RCR11389" "" 0 "" "RHEA:24536" "HMR_4214"
"MAR04216" "R01958" "FKYNH" "R01958C" "r0454" "" "FKYNH" "MNXR99596" "HMR_4216" "RCR11390" "" 0 "" "" "HMR_4216"
"MAR04218" "R03936" "LFORKYNHYD" "R03936C" "r0646" "" "LFORKYNHYD" "MNXR101060;MNXR108539" "HMR_4218" "RCR11391" "" 0 "" "" "HMR_4218"
"MAR04219" "R00988" "" "R00988C" "r0239" "" "r0239" "MNXR105316;MNXR106774" "HMR_4219" "RCR11392" "" 0 "" "" "HMR_4219"
"MAR04220" "R01960" "KYN3OX" "R01960C" "r0455" "" "KYN3OX" "MNXR100947" "HMR_4220" "RCR11393" "" 0 "RHEA:20548" "RHEA:20545" "HMR_4220"
-"MAR04222" "" "" "RE1233C" "" "" "RE1233C" "" "HMR_4222" "RCR11394" "" 0 "" "" "HMR_4222"
+"MAR04222" "" "" "RE1233C" "" "" "RE1233C" "" "HMR_4222" "RCR11394" "" 0 "RHEA:65561" "RHEA:65560" "HMR_4222;MAR08564+MAR08565"
"MAR04224" "R00987" "KYN" "R00987C" "r0238" "" "KYN" "MNXR100946" "HMR_4224" "RCR11395" "" 0 "" "RHEA:16813" "HMR_4224"
"MAR04225" "R02668" "HKYNH" "R02668C" "r0563" "" "HKYNH" "MNXR100656" "HMR_4225" "RCR10534" "" 0 "" "RHEA:25143" "HMR_4225"
"MAR04227" "R02670" "" "" "" "" "HMR_4227" "MNXR107655" "HMR_4227" "RCR14355" "" 0 "" "" "HMR_4227"
@@ -821,8 +814,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04232" "" "" "RE0549C" "" "" "RE0549C" "MNXR103449" "HMR_4232" "RCR10536" "" 0 "" "" "HMR_4232"
"MAR04233" "R03889" "" "" "r0645" "" "r0645" "MNXR95796" "HMR_4233" "RCR11396" "" 0 "" "RHEA:14469" "HMR_4233"
"MAR04235" "R01938" "AMCOXO" "" "r0449" "" "AMCOXO" "MNXR95807" "HMR_4235" "RCR11397" "" 0 "" "" "HMR_4235"
-"MAR04242" "R02487" "" "R02487M" "r0541" "" "r0541" "MNXR100293" "HMR_4242" "RCR14356" "" 0 "" "RHEA:30847" "HMR_4242"
-"MAR04243" "R02487" "GLUTCOADHm" "" "" "" "GLUTCOADHm" "" "HMR_4243" "RCR11398" "" 0 "" "RHEA:30847" "HMR_4243"
+"MAR04243" "R02487" "GLUTCOADHm" "R02487M" "r0541" "" "GLUTCOADHm;r0541" "MNXR100293" "HMR_4243;HMR_4242" "RCR11398;RCR14356" "" 0 "" "RHEA:30847" "HMR_4243;HMR_4242;MAR04242"
"MAR04244" "R04171" "3HKYNAKGAT" "R04171C" "r0662" "" "3HKYNAKGAT" "MNXR108708;MNXR94895" "HMR_4244" "RCR11399" "" 0 "" "RHEA:65888" "HMR_4244"
"MAR04245" "R03954" "" "" "r0647" "" "r0647" "MNXR105360;MNXR108552" "HMR_4245" "RCR11400" "" 0 "RHEA:65893" "RHEA:65892" "HMR_4245"
"MAR04246" "" "" "RE2349C" "" "" "RE2349C" "" "HMR_4246" "RCR11401" "" 0 "" "" "HMR_4246"
@@ -961,7 +953,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR06889" "" "" "RE3201C" "" "" "RE3201C" "MNXR103829" "HMR_6889" "RCR11479" "" 0 "" "" "HMR_6889"
"MAR07628" "R00690" "" "" "" "" "HMR_7628" "MNXR106645" "HMR_7628" "RCR11480" "" 0 "" "RHEA:10712" "HMR_7628"
"MAR07756" "R02540" "" "" "" "" "HMR_7756" "MNXR95813" "HMR_7756" "RCR11481" "" 0 "" "RHEA:64820" "HMR_7756"
-"MAR08539" "R07211" "PHETHPTOX2" "" "" "" "PHETHPTOX2" "MNXR102633" "HMR_8539" "RCR11482" "" 0 "" "RHEA:20273" "HMR_8539"
+"MAR08539" "R07211" "PHETHPTOX2" "" "" "" "PHETHPTOX2" "MNXR102633" "HMR_8539" "RCR11482" "" 0 "" "RHEA:20273" "HMR_8539;MAR03940"
"MAR08794" "R02539" "PACCOAL" "" "" "" "PACCOAL" "MNXR102315" "HMR_8794" "RCR11483" "" 0 "" "RHEA:20956" "HMR_8794"
"MAR08795" "R02576" "PHACCOAGLNAC" "" "" "" "PHACCOAGLNAC" "MNXR102611" "HMR_8795" "RCR11484" "" 0 "" "RHEA:21844" "HMR_8795"
"MAR08796" "R05841" "" "" "" "" "HMR_8796" "MNXR102612" "HMR_8796" "RCR11485" "" 0 "RHEA:27851" "RHEA:27850" "HMR_8796"
@@ -979,7 +971,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR03996" "R00892" "HMR_3996" "" "" "" "HMR_3996" "MNXR106737" "HMR_3996" "RCR10546" "" 0 "" "RHEA:20597" "HMR_3996"
"MAR04072" "R00380" "" "" "" "" "HMR_4072" "MNXR97627" "HMR_4072" "RCR10547" "" 0 "" "RHEA:13681" "HMR_4072"
"MAR04189" "R00533" "" "R00533C" "r0142" "" "r0142" "MNXR104649" "HMR_4189" "RCR11488" "" 0 "RHEA:24601" "RHEA:24600" "HMR_4189"
-"MAR04302" "R00782" "" "R00782C" "r0193" "" "" "MNXR105313;MNXR96994" "HMR_4302" "RCR11489" "" 0 "" "RHEA:24931" "HMR_4302"
+"MAR04302" "R00782" "r0193" "R00782C" "r0193" "" "r0193" "MNXR105313;MNXR96994" "HMR_4302" "RCR11489" "" 0 "" "RHEA:24931" "HMR_4302;r0193;MAR02027"
"MAR04323" "R00891" "" "R00891C" "r0210" "" "r0210" "MNXR105314;MNXR96986" "HMR_4323" "RCR11490" "" 0 "" "" "HMR_4323"
"MAR05381" "R02021" "" "RE3009C" "" "" "RE3009C" "MNXR102376" "HMR_5381" "RCR10548" "" 0 "" "RHEA:11724" "HMR_5381"
"MAR05385" "R04420" "" "" "" "" "MTRI" "MNXR101759" "HMR_5385" "RCR14401" "" 0 "RHEA:19990" "RHEA:19989" "HMR_5385"
@@ -1032,10 +1024,10 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04425" "R01164" "" "" "r0283" "" "r0283" "MNXR105319;MNXR106848" "HMR_4425" "RCR10552" "" 0 "" "RHEA:19297" "HMR_4425"
"MAR04427" "R01166" "NBAHH_ir" "R01166E" "r0284" "" "NBAHH_ir" "MNXR100638;MNXR106849" "HMR_4427" "RCR10553" "" 0 "" "RHEA:59360" "HMR_4427"
"MAR04688" "R02549" "" "R02549C" "r0549" "" "r0549" "MNXR95191" "HMR_4688" "RCR10554" "" 0 "" "RHEA:19105" "HMR_4688"
-"MAR04689" "R02549" "ABUTD" "" "" "" "ABUTD" "MNXR95191" "HMR_4689" "RCR10338" "" 0 "" "RHEA:19105" "HMR_4689"
+"MAR04689" "R02549" "ABUTD;ABUTDm;R_ABUTD;R_ABUTDm" "" "" "" "ABUTD" "MNXR95191" "HMR_4689" "RCR10338" "" 0 "" "RHEA:19105" "HMR_4689"
"MAR04735" "R03045" "PRPNCOAHYDm" "R03045M" "r0592" "" "PRPNCOAHYDm" "MNXR100691" "HMR_4735" "RCR10555" "" 0 "" "RHEA:26518" "HMR_4735"
"MAR07991" "R01914" "SPMDOX" "" "" "" "SPMDOX" "MNXR104481" "HMR_7991" "RCR10339" "" 0 "" "RHEA:25820" "HMR_7991"
-"MAR07992" "" "13DAMPPOX" "" "" "" "" "MNXR94687" "HMR_7992" "RCR10340" "" 0 "" "" "HMR_7992"
+"MAR07992" "" "13DAMPPOX" "" "" "" "13DAMPPOX" "MNXR94687" "HMR_7992" "RCR10340" "" 0 "" "" "HMR_7992;13DAMPPOX;MAR00039"
"MAR07993" "" "BAMPPALDOX" "" "" "" "BAMPPALDOX" "MNXR95891" "HMR_7993" "RCR10341" "" 0 "" "" "HMR_7993"
"MAR07128" "R04929" "SELADT" "" "" "" "SELADT" "MNXR104310;MNXR109227" "HMR_7128" "RCR11509" "" 0 "" "" "HMR_7128"
"MAR07129" "R04928" "ADSELK" "" "" "" "ADSELK" "MNXR109226;MNXR95491" "HMR_7129" "RCR11510" "" 0 "" "" "HMR_7129"
@@ -1057,17 +1049,13 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR08689" "R02923" "DASCBH" "" "" "" "DARGOp" "MNXR97151" "HMR_8689" "RCR14418" "" 0 "" "" "HMR_8689"
"MAR08690" "R02457" "DPCOAPP" "" "" "" "DORNOp" "MNXR97763" "HMR_8690" "RCR14419" "" 0 "" "" "HMR_8690"
"MAR03748" "R01210" "OIVD2m" "R03171M" "r0600" "" "OIVD2m" "MNXR102173;MNXR107999" "HMR_3748" "RCR14420" "" 0 "" "RHEA:13997" "HMR_3748"
-"MAR03751" "R02660" "" "R02660M" "r0560" "" "r0560" "" "HMR_3751" "RCR14421" "" 0 "" "" "HMR_3751"
"MAR03753" "R04224" "ECOAH2m" "R04224M" "r0669" "" "ECOAH12m;r0669" "MNXR97885" "HMR_3753" "RCR11518" "" 0 "" "RHEA:31175" "HMR_3753"
-"MAR03755" "R03352" "r0779" "R03352M" "r0779" "" "r0779" "MNXR108112" "HMR_3755" "RCR11519" "" 0 "" "RHEA:20888" "HMR_3755"
+"MAR03755" "R03352" "3HBCOAHLm;r0779" "R03352M" "r0779" "" "3HBCOAHLm;r0779" "MNXR108112;MNXR94891" "HMR_3755" "RCR11519" "" 0 "" "RHEA:20888" "3HBCOAHLm;HMR_3755;MAR00042"
"MAR03759" "R03869" "r0643" "R03869C" "r0643" "" "r0643" "MNXR105358;MNXR95762" "HMR_3759" "RCR10556" "" 0 "" "RHEA:31043" "HMR_3759"
"MAR03763" "R02764" "r0571" "" "r0571" "" "" "MNXR105351" "HMR_3763" "RCR10557" "" 0 "" "RHEA:17345" "HMR_3763"
-"MAR03767" "R01651" "OIVD1m" "R03171M" "r0601" "" "OIVD1m" "MNXR102172;MNXR107999" "HMR_3767" "RCR14422" "" 0 "" "RHEA:25177" "HMR_3767"
-"MAR03769" "R04095" "" "R04095M" "r0655" "" "r0655" "MNXR95318" "HMR_3769" "RCR14423" "" 0 "" "" "HMR_3769"
"MAR03773" "R04138" "MCCCrm" "R04138M" "r0658" "" "MCCCrm" "MNXR101411" "HMR_3773" "RCR11520" "" 0 "" "RHEA:13589" "HMR_3773"
"MAR03775" "R02085" "MGCHrm" "R02085M" "r0490" "" "MGCHrm" "MNXR101513;MNXR107307" "HMR_3775" "RCR11521" "" 0 "" "RHEA:21536" "HMR_3775"
"MAR03780" "R03171" "OIVD3m" "R03171M" "r0602" "" "OIVD3m" "MNXR102174;MNXR107999" "HMR_3780" "RCR10345" "" 0 "" "RHEA:30907" "HMR_3780"
-"MAR03783" "R03172" "" "R03172M" "r0603" "" "r0603" "MNXR108000" "HMR_3783" "RCR14424" "" 0 "" "" "HMR_3783"
"MAR03785" "R04204" "ECOAH9m" "R04204M" "r0665" "" "ECOAH9m" "MNXR97894" "HMR_3785" "RCR11522" "" 0 "" "RHEA:31119" "HMR_3785"
"MAR03790" "R03871" "r0644" "R03871C" "r0644" "" "r0644" "MNXR105359;MNXR108490" "HMR_3790" "RCR10558" "" 0 "" "" "HMR_3790"
"MAR03792" "R02048" "" "R02048M" "r0483" "" "3AIBTm;r0483" "MNXR105346" "HMR_3792" "RCR11523" "" 0 "" "" "HMR_3792"
@@ -1261,7 +1249,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR05170" "" "" "" "" "" "HMR_5170" "" "HMR_5170" "RCR14472" "" 0 "" "" "HMR_5170"
"MAR05171" "" "" "" "" "" "HMR_5171" "" "HMR_5171" "RCR14473" "" 0 "" "" "HMR_5171"
"MAR05172" "" "" "" "r1402" "" "HMR_5172;r1402" "" "HMR_5172" "RCR14474" "" 0 "" "" "HMR_5172"
-"MAR05173" "" "" "" "" "" "HMR_5173" "" "HMR_5173" "RCR14475" "" 0 "" "" "HMR_5173"
"MAR05174" "" "" "" "" "" "HMR_5174" "" "HMR_5174" "RCR14476" "" 0 "" "" "HMR_5174"
"MAR07282" "" "" "" "" "" "" "" "HMR_7282" "RCR11617" "" 0 "" "" "HMR_7282"
"MAR07616" "" "" "" "" "" "HMR_7616" "" "HMR_7616" "RCR10348" "" 0 "" "" "HMR_7616"
@@ -1302,7 +1289,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR05286" "" "" "" "" "" "HMR_5286" "" "HMR_5286" "RCR11641" "" 0 "" "" "HMR_5286"
"MAR05287" "" "" "" "" "" "HMR_5287" "" "HMR_5287" "RCR11642" "" 0 "" "" "HMR_5287"
"MAR05288" "" "" "" "r1403" "" "r1403" "" "HMR_5288" "RCR10594" "" 0 "" "" "HMR_5288"
-"MAR05289" "" "" "" "" "" "HMR_5289" "" "HMR_5289" "RCR14478" "" 0 "" "" "HMR_5289"
"MAR05290" "" "" "" "" "" "HMR_5290" "" "HMR_5290" "RCR11643" "" 0 "" "" "HMR_5290"
"MAR05291" "" "" "" "" "" "HMR_5291" "" "HMR_5291" "RCR11644" "" 0 "" "" "HMR_5291"
"MAR09817" "" "" "" "" "" "HMR_9817" "" "HMR_9817" "RCR10595" "" 0 "" "" "HMR_9817"
@@ -1320,7 +1306,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04842" "" "" "" "r0800" "" "r0800" "MNXR105389" "HMR_4842" "RCR14480" "" 0 "" "" "HMR_4842"
"MAR08662" "R02405" "ITCOAL1m" "" "" "" "ITCOAL1m" "MNXR100883" "HMR_8662" "RCR11651" "" 0 "" "" "HMR_8662"
"MAR08663" "R02404" "ITCOALm" "" "" "" "ITCOALm" "MNXR100884" "HMR_8663" "RCR11652" "" 0 "" "" "HMR_8663"
-"MAR08664" "R02491" "CITMCOALm" "" "" "" "CITMCOAHm" "MNXR96733" "HMR_8664" "RCR10599" "" 0 "" "" "HMR_8664"
+"MAR08664" "R02491" "CITMCOALm" "" "" "" "CITMCOAHm" "MNXR96733" "HMR_8664" "RCR10599" "" 0 "RHEA:13787" "RHEA:13785" "HMR_8664"
"MAR08665" "" "MGACONm" "" "" "" "MGACONm" "MNXR101512" "HMR_8665" "RCR11653" "" 0 "" "" "HMR_8665"
"MAR08666" "R00237" "CITRtm" "" "" "" "CITMCOALm" "MNXR96735" "HMR_8666" "RCR10600" "" 0 "RHEA:22613" "RHEA:22612" "HMR_8666"
"MAR08667" "" "MECOALm" "" "" "" "MECOALm" "MNXR101452" "HMR_8667" "RCR11654" "" 0 "" "" "HMR_8667"
@@ -1343,13 +1329,11 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04458" "R01325" "" "R01325C" "r0317" "" "r0317" "MNXR105321;MNXR95386" "HMR_4458" "RCR10106" "" 0 "RHEA:10231" "RHEA:10228" "HMR_4458"
"MAR04465" "R01392" "HPYRRy" "R01392C" "r0327" "" "HPYRRy" "MNXR100336" "HMR_4465" "RCR11666" "" 0 "" "RHEA:18657" "HMR_4465"
"MAR04589" "R01900" "" "R01900C" "r0426" "" "r0426" "MNXR105342;MNXR95387" "HMR_4589" "RCR10352" "" 0 "" "RHEA:22144" "HMR_4589"
-"MAR04652" "R02164" "r0509" "R02164C" "r0509" "" "r0509" "MNXR107340" "HMR_4652" "RCR14481" "" 0 "" "RHEA:13713" "HMR_4652"
-"MAR05294" "R00362" "" "R00362C" "r1109" "" "r1109" "MNXR96731" "HMR_5294" "RCR11670" "" 0 "RHEA:10761" "RHEA:10760" "HMR_5294"
+"MAR04652" "R00408;R02164" "r0509;SUCD1m" "R02164C" "r0509" "" "r0509;SUCD1m" "MNXR107340;MNXR99636" "HMR_4652;HMR_8743" "RCR14481;RCR11674" "" 0 "" "RHEA:13713;RHEA:30343" "HMR_4652;HMR_8743;MAR08743"
"MAR06413" "R03316" "" "R03316M" "r0620" "" "r0620" "MNXR105357;MNXR108089" "HMR_6413" "RCR11672" "" 0 "" "" "HMR_6413"
"MAR06414" "R02570" "" "R02570C" "r0556" "" "r0556" "MNXR107585;MNXR95656" "HMR_6414" "RCR14482" "" 0 "" "RHEA:15213" "HMR_6414"
"MAR07704" "R00466" "GLXO2p" "" "" "" "GLXO2p" "MNXR100305" "HMR_7704" "RCR10605" "" 0 "" "RHEA:14837" "HMR_7704"
"MAR07706" "R00475" "GLYCTO1p" "" "" "" "GLYCTO1p" "MNXR100338" "HMR_7706" "RCR11673" "" 0 "" "RHEA:25311" "HMR_7706"
-"MAR08743" "R00408" "SUCD1m" "" "" "" "SUCD1m" "MNXR99636" "HMR_8743" "RCR11674" "" 0 "" "RHEA:30343" "HMR_8743"
"MAR08772" "" "KHK2" "" "" "" "KHK2" "MNXR100937" "HMR_8772" "RCR11675" "" 0 "" "" "HMR_8772"
"MAR08773" "R01785" "FBP" "" "" "" "FBA4" "MNXR99465" "HMR_8773" "RCR14483" "" 0 "" "" "HMR_8773"
"MAR08774" "R01393" "HPYRDC" "" "" "" "HPYRDC" "MNXR100700" "HMR_8774" "RCR11676" "" 0 "" "RHEA:20561" "HMR_8774"
@@ -1528,7 +1512,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR02179" "R04543" "" "R04543C" "r0696" "" "r0696" "MNXR94946" "HMR_2179" "RCR11798" "" 0 "" "" "HMR_2179"
"MAR02180" "R04544" "" "R04544C" "r0697" "" "r0697" "MNXR94881" "HMR_2180" "RCR11799" "" 0 "" "" "HMR_2180"
"MAR02181" "R04970" "" "R04970C" "r0773" "" "r0773" "MNXR109259" "HMR_2181" "RCR11800" "" 0 "RHEA:41913" "RHEA:41912" "HMR_2181"
-"MAR04156" "R00742" "ACCOAC" "R00742C" "r0184" "" "ACCOAC" "MNXR95219" "HMR_4156" "RCR10617" "" 0 "RHEA:11309" "RHEA:11308" "HMR_4156"
"MAR04295" "R00742" "ACCOACrm" "R00742C" "r0185" "" "ACCOACm" "MNXR95219" "HMR_4295" "RCR11801" "" 0 "RHEA:11309" "RHEA:11308" "HMR_4295"
"MAR02227" "" "" "" "" "" "HMR_2227" "" "HMR_2227" "RCR10098" "" 0 "" "" "HMR_2227"
"MAR02228" "" "" "" "" "" "HMR_2228" "" "HMR_2228" "RCR11802" "" 0 "" "" "HMR_2228"
@@ -1683,10 +1666,8 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR06397" "" "" "RE2882C" "" "" "HMR_6397" "" "HMR_6397" "RCR10619" "" 0 "" "" "HMR_6397"
"MAR06398" "R07770" "" "R07770C" "" "" "RE1944C" "MNXR101081" "HMR_6398" "RCR14489" "" 0 "" "RHEA:12913" "HMR_6398"
"MAR06399" "R07771" "" "R07771C" "" "" "HMR_6399" "MNXR111358" "HMR_6399" "RCR14490" "" 0 "" "RHEA:20473" "HMR_6399"
-"MAR06400" "R07768" "" "R07768C" "" "" "HMR_6400" "MNXR111356" "HMR_6400" "RCR11944" "" 0 "" "" "HMR_6400"
-"MAR06401" "R07769" "" "R07769C" "" "" "HMR_6401" "MNXR111357" "HMR_6401" "RCR11945" "" 0 "" "" "HMR_6401"
-"MAR06402" "R07766" "" "R07766C" "" "" "HMR_6402" "MNXR111354" "HMR_6402" "RCR11946" "" 0 "" "RHEA:17665" "HMR_6402"
-"MAR06403" "R07767" "" "R07767C" "" "" "HMR_6403" "MNXR111355" "HMR_6403" "RCR11947" "" 0 "" "RHEA:16585" "HMR_6403"
+"MAR06402" "R07766;R07769" "" "R07766C;R07769C" "" "" "HMR_6402;HMR_6401" "MNXR111354" "HMR_6402;HMR_6401" "RCR11946;RCR11945" "" 0 "RHEA:17666" "RHEA:17665" "HMR_6402;HMR_6401;MAR06401"
+"MAR06403" "R07767;R07768" "" "R07767C;R07768C" "" "" "HMR_6403;HMR_6400" "MNXR111355" "HMR_6403;HMR_6400" "RCR11947;RCR11948" "" 0 "RHEA:16586" "RHEA:16585" "HMR_6403;HMR_6400;MAR06400"
"MAR06404" "R08550" "" "R08550C" "" "" "HMR_6404" "MNXR112089" "HMR_6404" "RCR14491" "" 0 "" "" "HMR_6404"
"MAR02472" "" "HMR_2472" "RE3109C" "" "" "HMR_2472" "" "HMR_2472" "RCR11948" "" 0 "" "" "HMR_2472"
"MAR02475" "" "RE3110C" "RE3110C" "" "" "RE3110C" "MNXR103792" "HMR_2475" "RCR11949" "" 0 "" "" "HMR_2475"
@@ -1761,9 +1742,8 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR02582" "" "" "RE3497N" "" "" "HMR_2582" "" "HMR_2582" "RCR12015" "" 0 "" "" "HMR_2582"
"MAR02583" "" "" "RE3496C" "" "" "RE3496C" "MNXR103930" "HMR_2583" "RCR12016" "" 0 "" "" "HMR_2583"
"MAR02584" "" "" "RE3496N" "" "" "RE3496N" "MNXR103930" "HMR_2584" "RCR12017" "" 0 "" "" "HMR_2584"
-"MAR02586" "" "" "RE3503C" "" "" "RE3503C" "MNXR103936" "HMR_2586" "RCR12018" "" 0 "" "" "HMR_2586"
+"MAR02586" "" "" "RE3503C" "" "" "RE3503C" "MNXR103936" "HMR_2586;HMR_2588" "RCR12018;RCR12020" "" 0 "" "" "HMR_2586;HMR_2588;MAR02588"
"MAR02587" "" "" "RE3499C" "" "" "RE3499C" "MNXR103932" "HMR_2587" "RCR12019" "" 0 "" "" "HMR_2587"
-"MAR02588" "" "" "RE3503C" "" "" "RE3503C" "MNXR103936" "HMR_2588" "RCR12020" "" 0 "" "" "HMR_2588"
"MAR02368" "R03814" "HMR_2368" "R03814C" "r1469" "" "HMR_2368" "MNXR108447" "HMR_2368" "RCR12021" "" 0 "" "RHEA:47140" "HMR_2368"
"MAR02371" "" "" "RE3103C" "" "" "RE3103C" "MNXR103788" "HMR_2371" "RCR12022" "" 0 "" "" "HMR_2371"
"MAR02374" "" "" "" "" "" "HMR_2374" "" "HMR_2374" "RCR12023" "" 0 "" "" "HMR_2374"
@@ -1778,7 +1758,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR02395" "" "" "" "" "" "HMR_2395" "" "HMR_2395" "RCR12032" "" 0 "" "" "HMR_2395"
"MAR02397" "" "" "RE3154C" "" "" "RE3154C" "MNXR103810" "HMR_2397" "RCR12033" "" 0 "" "" "HMR_2397"
"MAR02399" "" "" "RE3155C" "" "" "RE3155C" "MNXR103811" "HMR_2399" "RCR12034" "" 0 "" "" "HMR_2399"
-"MAR02401" "" "" "RE3150C" "" "" "" "MNXR103806" "HMR_2401" "RCR12035" "" 0 "" "" "HMR_2401"
+"MAR02401" "" "RE3150C" "RE3150C" "" "" "RE3150C" "MNXR103806" "HMR_2401" "RCR12035" "" 0 "" "" "HMR_2401;RE3150C;MAR03441"
"MAR02403" "" "" "" "" "" "HMR_2403" "" "HMR_2403" "RCR12036" "" 0 "" "" "HMR_2403"
"MAR02408" "" "" "RE3157X" "" "" "RE3157X" "" "HMR_2408" "RCR12037" "" 0 "" "" "HMR_2408"
"MAR02409" "" "" "RE3159X" "" "" "RE3159X" "" "HMR_2409" "RCR12038" "" 0 "" "" "HMR_2409"
@@ -1827,14 +1807,13 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00931" "" "" "RE3650C" "" "" "HMR_0931" "" "HMR_0931" "RCR12080" "" 0 "" "" "HMR_0931"
"MAR00932" "" "" "RE3646C" "" "" "HMR_0932" "" "HMR_0932" "RCR12081" "" 0 "" "" "HMR_0932"
"MAR00933" "" "" "RE3648C" "" "" "HMR_0933" "" "HMR_0933" "RCR12082" "" 0 "" "" "HMR_0933"
-"MAR00934" "" "" "RE3651C" "" "" "" "" "HMR_0934" "RCR12083" "" 0 "" "" "HMR_0934"
+"MAR00934" "R07041" "" "R07041C;RE3651C" "" "" "" "MNXR110751" "HMR_0934;HMR_0941" "RCR12083;RCR12090" "" 0 "" "" "HMR_0934;HMR_0941;MAR00941"
"MAR00935" "" "" "RE3647C" "" "" "HMR_0935" "" "HMR_0935" "RCR12084" "" 0 "" "" "HMR_0935"
"MAR00936" "" "" "RE3649C" "" "" "HMR_0936" "" "HMR_0936" "RCR12085" "" 0 "" "" "HMR_0936"
"MAR00937" "R07054" "" "R07054C" "" "" "HMR_0937" "MNXR110764" "HMR_0937" "RCR12086" "" 0 "" "" "HMR_0937"
"MAR00938" "" "" "RE3654C" "" "" "HMR_0938" "" "HMR_0938" "RCR12087" "" 0 "" "" "HMR_0938"
"MAR00939" "" "" "RE3653C" "" "" "HMR_0939" "" "HMR_0939" "RCR12088" "" 0 "" "" "HMR_0939"
"MAR00940" "R07046" "" "R07046C" "" "" "HMR_0940" "MNXR110756" "HMR_0940" "RCR12089" "" 0 "" "" "HMR_0940"
-"MAR00941" "R07041" "" "R07041C" "" "" "" "MNXR110751" "HMR_0941" "RCR12090" "" 0 "" "" "HMR_0941"
"MAR00942" "R07052" "" "R07052C" "" "" "HMR_0942" "MNXR110762" "HMR_0942" "RCR12091" "" 0 "" "" "HMR_0942"
"MAR00943" "" "" "RE3286C" "" "" "RE3286C" "MNXR103862" "HMR_0943" "RCR10622" "" 0 "" "" "HMR_0943"
"MAR00944" "" "" "RE3286R" "" "" "RE3286R" "MNXR103862" "HMR_0944" "RCR14493" "" 0 "" "" "HMR_0944"
@@ -2194,7 +2173,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR02591" "R02396" "CSNATr" "R02396C" "r0534" "" "CSNATr" "MNXR96926" "HMR_2591" "RCR12360" "" 0 "" "RHEA:21136" "HMR_2591"
"MAR02594" "" "C30CPT1" "" "r1396" "" "C30CPT1" "" "HMR_2594" "RCR12361" "" 0 "" "" "HMR_2594"
"MAR02599" "R01923" "" "R01923X" "r0431" "" "r0431" "MNXR105343;MNXR107232" "HMR_2599" "RCR12362" "" 0 "" "RHEA:12661" "HMR_2599"
-"MAR02602" "" "HMR_2602" "" "" "" "HMR_2602" "" "HMR_2602" "RCR12363" "" 0 "" "" "HMR_2602"
+"MAR02602" "" "C120CPT1;HMR_2602" "" "" "" "C120CPT1;HMR_2602" "" "HMR_2602" "RCR12363" "" 0 "" "" "C120CPT1;HMR_2602;MAR04506"
"MAR02605" "" "" "" "" "" "HMR_2605" "" "HMR_2605" "RCR12364" "" 0 "" "" "HMR_2605"
"MAR02608" "" "HMR_2608" "" "" "" "HMR_2608" "" "HMR_2608" "RCR12365" "" 0 "" "" "HMR_2608"
"MAR02611" "" "HMR_2611" "" "" "" "HMR_2611" "" "HMR_2611" "RCR12366" "" 0 "" "" "HMR_2611"
@@ -2502,7 +2481,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00002" "R02250" "" "" "" "" "HMR_0002" "" "HMR_0002" "RCR30274" "" 0 "" "" "HMR_0002"
"MAR00003" "R02687" "" "" "" "" "HMR_0003" "" "HMR_0003" "RCR30275" "" 0 "" "" "HMR_0003"
"MAR00005" "R01351" "" "" "" "" "HMR_0005" "" "HMR_0005" "RCR12493" "" 0 "" "RHEA:34019" "HMR_0005"
-"MAR00449" "R00848" "" "" "" "R-HSA-188467" "GLYC3PFADm" "MNXR99875" "HMR_0449" "RCR12494" "" 0 "" "RHEA:31283" "HMR_0449"
+"MAR00449" "R00848;R00849" "" "" "r0205" "R-HSA-188467" "GLYC3PFADm;r0205" "MNXR99875;MNXR106713" "HMR_0449;HMR_0483" "RCR12494;RCR21050" "" 0 "" "RHEA:31283;RHEA:18977" "HMR_0449;HMR_0483"
"MAR00604" "R02240" "DAGK_hs" "" "" "" "DAGK_hs" "" "HMR_0604" "RCR14512" "" 0 "" "RHEA:10272" "HMR_0604"
"MAR00605" "R02251" "" "" "r1223" "" "HMR_0605" "" "HMR_0605" "RCR12495" "" 0 "" "RHEA:10868" "HMR_0605"
"MAR00665" "R02250" "" "" "r1224" "" "HMR_0665" "" "HMR_0665" "RCR14513" "" 0 "" "" "HMR_0665"
@@ -2600,19 +2579,17 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR03352" "" "" "" "" "" "HMR_3352" "" "HMR_3352" "RCR12573" "" 0 "" "" "HMR_3352"
"MAR03353" "" "" "" "" "" "HMR_3353" "" "HMR_3353" "RCR12574" "" 0 "" "" "HMR_3353"
"MAR03355" "R04100" "DCIm" "" "" "" "FAOXC121x" "MNXR97183" "HMR_3355" "RCR12575" "" 0 "RHEA:23719" "RHEA:23716" "HMR_3355"
-"MAR03364" "" "" "RE2913X" "" "" "" "" "HMR_3364" "RCR12576" "" 0 "" "" "HMR_3364"
"MAR03365" "" "" "RE2919X" "" "" "RE2919X" "" "HMR_3365" "RCR12577" "" 0 "" "" "HMR_3365"
"MAR03367" "" "" "RE2908X" "" "" "RE2908X" "" "HMR_3367" "RCR12578" "" 0 "" "" "HMR_3367"
"MAR03368" "" "" "RE2916X" "" "" "RE2916X" "" "HMR_3368" "RCR12579" "" 0 "" "" "HMR_3368"
-"MAR03369" "" "" "RE2914X" "" "" "" "" "HMR_3369" "RCR12580" "" 0 "" "" "HMR_3369"
"MAR03370" "" "" "RE2920X" "" "" "RE2920X" "" "HMR_3370" "RCR12581" "" 0 "" "" "HMR_3370"
"MAR03372" "" "" "RE2909X" "" "" "RE2909X" "" "HMR_3372" "RCR12582" "" 0 "" "" "HMR_3372"
"MAR03373" "" "" "RE2917X" "" "" "RE2917X" "" "HMR_3373" "RCR12583" "" 0 "" "" "HMR_3373"
"MAR03375" "" "" "RE0511X" "" "" "HMR_3375" "" "HMR_3375" "RCR12584" "" 0 "" "" "HMR_3375"
"MAR03478" "" "" "" "" "" "HMR_3478" "" "HMR_3478" "RCR20502" "" 0 "" "" "HMR_3478"
-"MAR03480" "R03631" "" "RE3075C" "" "" "" "MNXR103785;MNXR108311" "HMR_3480" "RCR12585" "" 0 "" "RHEA:21380" "HMR_3480"
+"MAR03480" "R03631" "FACOAL206" "RE3075C" "" "" "FACOAL206" "MNXR103785;MNXR108311;MNXR99186" "HMR_3480" "RCR12585" "" 0 "" "RHEA:21380" "FACOAL206;HMR_3480;MAR00740"
"MAR03481" "" "" "" "" "" "SCP21x" "" "HMR_3481" "RCR20503" "" 0 "" "" "HMR_3481"
-"MAR03482" "R03631" "" "RE3075X" "" "R-HSA-389622" "" "MNXR108311" "HMR_3482" "RCR12586" "" 0 "" "RHEA:21380" "HMR_3482"
+"MAR03482" "R03631" "FAOXC16Brx" "RE3075X" "" "R-HSA-389622" "FAOXC16BRx" "MNXR108311;MNXR99186" "HMR_3482" "RCR12586" "" 0 "" "RHEA:21380" "FAOXC16BRx;HMR_3482;MAR05323"
"MAR03484" "R05722" "" "RE3066X" "" "R-HSA-389639" "PHYHx" "MNXR109782" "HMR_3484" "RCR12587" "" 0 "" "RHEA:16065" "HMR_3484"
"MAR03486" "" "" "RE3072X" "" "R-HSA-389611" "HPCLx" "MNXR118525" "HMR_3486" "RCR12588" "" 0 "RHEA:25356" "RHEA:25355" "HMR_3486"
"MAR03491" "" "" "RE2759X" "" "R-HSA-389897" "HMR_3491;RE2759X" "MNXR124916" "HMR_3491" "RCR12591" "" 0 "RHEA:40450" "RHEA:40447" "HMR_3491"
@@ -2630,16 +2607,13 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR03513" "" "" "RE3092X" "" "" "RE3092X" "" "HMR_3513" "RCR12603" "" 0 "" "" "HMR_3513"
"MAR03514" "" "" "RE3093X" "" "" "RE3093X" "" "HMR_3514" "RCR12604" "" 0 "" "" "HMR_3514"
"MAR03515" "" "" "RE3090X" "" "" "RE3090X" "" "HMR_3515" "RCR12605" "" 0 "" "" "HMR_3515"
-"MAR03517" "" "" "RT0781" "" "" "" "" "HMR_3517" "RCR20504" "" 0 "" "" "HMR_3517"
-"MAR03301" "" "" "RE1516X" "" "" "" "" "HMR_3301" "RCR12606" "" 0 "" "" "HMR_3301"
+"MAR03517" "" "SCP22x" "RT0781" "" "" "SCP22x" "MNXR104294" "HMR_3517" "RCR20504" "" 0 "" "" "HMR_3517;SCP22x;MAR01709"
"MAR03302" "" "" "RE1523X" "" "" "RE1523X" "" "HMR_3302" "RCR12607" "" 0 "" "" "HMR_3302"
"MAR03304" "" "" "RE0512X" "" "" "RE0512X" "" "HMR_3304" "RCR12608" "" 0 "" "" "HMR_3304"
"MAR03305" "" "" "RE1531X" "" "" "RE1531X" "" "HMR_3305" "RCR12609" "" 0 "" "" "HMR_3305"
-"MAR03306" "" "" "RE1517X" "" "" "" "" "HMR_3306" "RCR12610" "" 0 "" "" "HMR_3306"
"MAR03307" "" "" "RE1522X" "" "" "RE1522X" "" "HMR_3307" "RCR12611" "" 0 "" "" "HMR_3307"
"MAR03309" "" "" "RE1525X" "" "" "RE1525X" "" "HMR_3309" "RCR12612" "" 0 "" "" "HMR_3309"
"MAR03310" "" "" "RE1532X" "" "" "RE1532X" "" "HMR_3310" "RCR12613" "" 0 "" "" "HMR_3310"
-"MAR03311" "" "" "RE1518X" "" "" "" "" "HMR_3311" "RCR14519" "" 0 "" "" "HMR_3311"
"MAR03312" "" "" "RE1521X" "" "" "RE1521X" "" "HMR_3312" "RCR14520" "" 0 "" "" "HMR_3312"
"MAR03314" "" "" "RE1526X" "" "" "RE1526X" "" "HMR_3314" "RCR12614" "" 0 "" "" "HMR_3314"
"MAR03315" "" "" "RE1533X" "" "" "RE1533X" "" "HMR_3315" "RCR12615" "" 0 "" "" "HMR_3315"
@@ -2662,27 +2636,27 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR03116" "R07760" "" "" "" "" "HMR_3116" "" "HMR_3116" "RCR12630" "" 0 "RHEA:35349" "RHEA:35347" "HMR_3116"
"MAR03117" "" "" "" "" "" "HMR_3117" "" "HMR_3117" "RCR12631" "" 0 "RHEA:35276" "RHEA:35275" "HMR_3117"
"MAR03118" "" "" "" "" "" "HMR_3118" "" "HMR_3118" "RCR12632" "" 0 "" "" "HMR_3118"
-"MAR03121" "R01279" "" "" "" "R-HSA-77299" "HMR_3121" "MNXR125070" "HMR_3121" "RCR12633" "" 0 "" "RHEA:30747" "HMR_3121"
+"MAR03121" "R01279" "r0310" "" "" "R-HSA-77299" "HMR_3121;r0310" "MNXR125070" "HMR_3121" "RCR12633" "" 0 "" "RHEA:30747" "HMR_3121;r0310;MAR02035"
"MAR03122" "R04738" "" "R04738X" "r0716" "" "r0716" "MNXR105372;MNXR97892" "HMR_3122" "RCR12634" "" 0 "" "RHEA:31163" "HMR_3122"
"MAR03123" "R04737" "" "R04737X" "r0714" "" "r0714" "MNXR100548;MNXR105371" "HMR_3123" "RCR12635" "" 0 "" "RHEA:31159" "HMR_3123"
"MAR03125" "R03991" "" "R03991X" "r0653" "" "r0653" "MNXR95203" "HMR_3125" "RCR12636" "" 0 "" "RHEA:18161" "HMR_3125"
-"MAR03128" "R03990" "" "" "" "R-HSA-77274" "HMR_3128" "MNXR95300" "HMR_3128" "RCR12637" "" 0 "" "RHEA:28358" "HMR_3128"
+"MAR03128" "R03990" "r1449" "" "" "R-HSA-77274" "HMR_3128;r1449" "MNXR95300" "HMR_3128" "RCR12637" "" 0 "" "RHEA:28358" "HMR_3128;r1449;MAR02370"
"MAR03129" "R04740" "" "R04740X" "r0720" "" "r0720" "MNXR105373;MNXR97891" "HMR_3129" "RCR12638" "" 0 "" "RHEA:31171" "HMR_3129"
"MAR03130" "R04739" "" "R04739X" "r0718" "" "r0718" "MNXR100547" "HMR_3130" "RCR12639" "" 0 "" "RHEA:31167" "HMR_3130"
"MAR03132" "R03858" "" "R03858X" "r0639" "" "r0639" "MNXR95201" "HMR_3132" "RCR12640" "" 0 "" "RHEA:31091" "HMR_3132"
-"MAR03135" "R03857" "" "" "" "R-HSA-77263" "HMR_3135" "MNXR95299" "HMR_3135" "RCR12641" "" 0 "" "RHEA:31039" "HMR_3135"
-"MAR03136" "R04170" "" "R04170X" "r0660" "" "r0660" "MNXR97890" "HMR_3136" "RCR12642" "" 0 "" "RHEA:31075" "HMR_3136"
+"MAR03135" "R03857" "r1447" "" "" "R-HSA-77263" "HMR_3135;r1447" "MNXR95299" "HMR_3135" "RCR12641" "" 0 "" "RHEA:31039" "HMR_3135;r1447;MAR02367"
+"MAR03136" "R04170" "r1446" "R04170X" "r0660" "" "r0660;r1446" "MNXR97890" "HMR_3136" "RCR12642" "" 0 "" "RHEA:31075" "HMR_3136;r1446;MAR02366"
"MAR03137" "R04741" "" "R04741X" "r0722" "" "r0722" "MNXR100546" "HMR_3137" "RCR12643" "" 0 "" "RHEA:31179" "HMR_3137"
"MAR03139" "R04742" "" "R04742X" "r0724" "" "r0724" "MNXR95199;MNXR95200" "HMR_3139" "RCR12644" "" 0 "RHEA:31185" "RHEA:31183" "HMR_3139"
-"MAR03142" "R04754" "" "" "" "R-HSA-77345" "HMR_3142" "MNXR109095" "HMR_3142" "RCR12645" "" 0 "" "RHEA:28354" "HMR_3142"
+"MAR03142" "R04754" "r1451" "" "" "R-HSA-77345" "HMR_3142;r1451" "MNXR109095" "HMR_3142" "RCR12645" "" 0 "" "RHEA:28354" "HMR_3142;r1451;MAR02373"
"MAR03143" "R04744" "" "R04744X" "r0728" "" "r0728" "MNXR97889" "HMR_3143" "RCR12646" "" 0 "" "RHEA:31191" "HMR_3143"
"MAR03144" "R04743" "" "R04743X" "r0726" "" "r0726" "MNXR100545" "HMR_3144" "RCR12647" "" 0 "" "RHEA:31187" "HMR_3144"
"MAR03146" "R03778" "" "R03778X" "r0634" "" "r0634" "MNXR95198" "HMR_3146" "RCR12648" "" 0 "RHEA:31089" "RHEA:31087" "HMR_3146"
-"MAR03149" "R03777" "" "" "" "R-HSA-77338" "HMR_3149" "MNXR95304" "HMR_3149" "RCR12649" "" 0 "" "RHEA:30943" "HMR_3149"
+"MAR03149" "R03777" "r1448" "" "" "R-HSA-77338" "HMR_3149;r1448" "MNXR95304" "HMR_3149" "RCR12649" "" 0 "" "RHEA:30943" "HMR_3149;r1448;MAR02369"
"MAR03150" "R04746" "" "R04746M" "r0731" "" "r0731" "MNXR97888" "HMR_3150" "RCR12650" "" 0 "" "RHEA:31199" "HMR_3150"
"MAR03151" "R04745" "" "R04745M" "r0730" "" "r0730" "MNXR100544" "HMR_3151" "RCR12651" "" 0 "" "RHEA:31195" "HMR_3151"
"MAR03153" "R04747" "" "R04747M" "r0732" "" "r0732" "MNXR109092" "HMR_3153" "RCR12652" "" 0 "RHEA:31205" "RHEA:31203" "HMR_3153"
-"MAR03156" "R04751" "" "" "" "R-HSA-77327" "HMR_3156" "MNXR109093" "HMR_3156" "RCR12653" "" 0 "" "RHEA:31207" "HMR_3156"
+"MAR03156" "R04751" "r1450" "" "" "R-HSA-77327" "HMR_3156;r1450" "MNXR109093" "HMR_3156" "RCR12653" "" 0 "" "RHEA:31207" "HMR_3156;r1450;MAR02372"
"MAR03157" "R04749" "" "R04749M" "r0734" "" "r0734" "MNXR97886" "HMR_3157" "RCR12654" "" 0 "" "RHEA:30547" "HMR_3157"
"MAR03158" "R04748" "" "R04748M" "r0733" "R-HSA-77323" "r0733" "MNXR100543" "HMR_3158" "RCR12655" "" 0 "" "RHEA:31143" "HMR_3158"
"MAR03160" "R01177" "" "R01177M" "r0287" "R-HSA-77321" "r0287" "MNXR95196" "HMR_3160" "RCR12656" "" 0 "" "RHEA:31111" "HMR_3160"
@@ -2864,8 +2838,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR07169" "R09847" "" "" "" "" "HMR_7169" "MNXR113248" "HMR_7169" "RCR12827" "" 0 "" "" "HMR_7169"
"MAR07170" "R09562" "" "" "" "" "HMR_7170" "MNXR112981" "HMR_7170" "RCR12828" "" 0 "" "RHEA:30231" "HMR_7170"
"MAR09722" "R03816" "" "" "" "" "HMR_9722" "MNXR108448" "HMR_9722" "RCR12829" "" 0 "" "RHEA:74075" "HMR_9722"
-"MAR01644" "R04813" "" "RE3248M" "" "" "HMR_1644" "" "HMR_1644" "RCR12830" "" 0 "" "RHEA:18933" "HMR_1644"
-"MAR01651" "R04812" "" "RE3250M" "" "" "HMR_1651" "" "HMR_1651" "RCR12831" "" 0 "" "" "HMR_1651"
"MAR01920" "R08941" "" "RE1100C" "" "" "RE1100C" "MNXR104607;MNXR112432" "HMR_1920" "RCR10697" "" 0 "" "" "HMR_1920"
"MAR01924" "" "" "" "" "R-HSA-196126" "" "" "HMR_1924" "RCR12832" "" 0 "" "" "HMR_1924"
"MAR01926" "" "" "" "" "R-HSA-196086" "" "" "HMR_1926" "RCR12833" "" 0 "" "" "HMR_1926"
@@ -3447,11 +3419,8 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00448" "R00847" "GLYKm" "R00847C" "r0204" "" "GLYKm" "MNXR100348" "HMR_0448" "RCR13153" "" 0 "" "RHEA:21644" "HMR_0448"
"MAR00450" "R00847" "GLYK" "R00847C" "r0203" "" "GLYK" "MNXR100348" "HMR_0450" "RCR10853" "" 0 "" "RHEA:21644" "HMR_0450"
"MAR00468" "" "CEPTC" "" "r1288" "" "HMR_0468" "MNXR96592" "HMR_0468" "RCR13154" "" 0 "" "" "HMR_0468"
-"MAR00478" "R00844" "" "" "" "R-HSA-75889" "HMR_0478" "MNXR99876" "HMR_0478" "RCR14575" "" 0 "RHEA:11098" "RHEA:11096" "HMR_0478"
-"MAR00479" "R00842" "G3PD1" "R00842C" "r0201" "" "G3PD1" "MNXR99876" "HMR_0479" "RCR14576" "" 0 "" "RHEA:11092" "HMR_0479"
+"MAR00479" "R00842;R00844" "G3PD1" "R00842C" "r0201" "R-HSA-75889" "G3PD1;HMR_0478" "MNXR99876" "HMR_0479;HMR_0478" "RCR14576;RCR14575" "" 0 "" "RHEA:11092" "HMR_0479;HMR_0478;MAR00478"
"MAR00481" "R00842" "" "R00842C" "r0202" "" "r0202" "MNXR99876" "HMR_0481" "RCR14577" "" 0 "" "RHEA:11092" "HMR_0481"
-"MAR00483" "R00849" "" "" "r0205" "" "r0205" "MNXR106713" "HMR_0483" "RCR21050" "" 0 "" "RHEA:18977" "HMR_0483"
-"MAR00482" "R00848" "G3PD2m" "R00848C" "" "" "HMR_0482" "MNXR99875" "HMR_0482" "RCR14578" "" 0 "" "RHEA:31283" "HMR_0482"
"MAR00484" "R00855" "" "" "" "" "HMR_0484" "MNXR106718" "HMR_0484" "RCR14579" "" 0 "" "RHEA:21692" "HMR_0484"
"MAR00579" "R00851" "" "" "r1307" "" "HMR_0579" "" "HMR_0579" "RCR13155" "" 0 "" "RHEA:15325" "HMR_0579"
"MAR00580" "R02241" "" "" "r1308" "" "HMR_0580" "" "HMR_0580" "RCR13156" "" 0 "" "RHEA:19709" "HMR_0580"
@@ -3772,13 +3741,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR07610" "R04321" "" "" "" "" "HMR_7610" "MNXR108810" "HMR_7610" "RCR14616" "" 0 "" "RHEA:36183" "HMR_7610"
"MAR07614" "R03438" "" "" "" "" "HMR_7614" "MNXR108170" "HMR_7614" "RCR10262" "" 0 "" "RHEA:23992" "HMR_7614"
"MAR07615" "R07387" "" "" "" "" "HMR_7615" "MNXR111044" "HMR_7615" "RCR13366" "" 0 "" "RHEA:36231" "HMR_7615"
-"MAR00024" "" "" "" "" "" "HMR_0024" "" "HMR_0024" "RCR13367" "" 0 "" "" "HMR_0024"
-"MAR00025" "" "" "" "" "" "HMR_0025" "" "HMR_0025" "RCR20226" "" 0 "" "" "HMR_0025"
-"MAR00026" "" "" "" "" "" "HMR_0026" "" "HMR_0026" "RCR21051" "" 0 "" "" "HMR_0026"
-"MAR00027" "" "" "" "" "" "HMR_0027" "" "HMR_0027" "RCR21052" "" 0 "" "" "HMR_0027"
-"MAR00028" "" "" "" "" "" "HMR_0028" "" "HMR_0028" "RCR21053" "" 0 "" "" "HMR_0028"
-"MAR00029" "" "" "" "" "" "HMR_0029" "" "HMR_0029" "RCR40953" "" 0 "" "" "HMR_0029"
-"MAR00030" "" "" "" "" "" "HMR_0030" "" "HMR_0030" "RCR20227" "" 0 "" "" "HMR_0030"
"MAR07200" "R05925" "XYLTer" "" "" "" "XYLTer" "MNXR105263;MNXR109949" "HMR_7200" "RCR13368" "" 0 "" "RHEA:50192" "HMR_7200"
"MAR07202" "R05926" "GALTg" "" "" "" "GALTg" "MNXR100017;MNXR109950" "HMR_7202" "RCR14617" "" 0 "" "RHEA:15297" "HMR_7202"
"MAR07203" "R05927" "GALT2g" "" "" "" "GALT2g" "MNXR100016" "HMR_7203" "RCR13369" "" 0 "" "RHEA:11780" "HMR_7203"
@@ -4060,25 +4022,17 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01624" "R08733" "VLCSr" "R04580R" "r0703" "" "VLCSr" "MNXR105207;MNXR108978" "HMR_1624" "RCR13605" "" 0 "" "" "HMR_1624"
"MAR01625" "R08733" "VLCSp" "" "" "" "VLCSp" "MNXR105207" "HMR_1625" "RCR10914" "" 0 "" "" "HMR_1625"
"MAR01627" "R08733" "" "" "" "R-HSA-193401" "HMR_1627" "MNXR112239" "HMR_1627" "RCR10394" "" 0 "" "" "HMR_1627"
-"MAR01629" "" "" "" "" "R-HSA-192325" "HMR_1629" "MNXR125295" "HMR_1629" "RCR20233" "" 0 "" "" "HMR_1629"
-"MAR01630" "" "" "" "" "R-HSA-192325" "HMR_1630" "MNXR125295" "HMR_1630" "RCR20511" "" 0 "" "" "HMR_1630"
+"MAR01629" "" "" "" "" "R-HSA-192325" "HMR_1629;HMR_1630" "MNXR125295" "HMR_1629;HMR_1630" "RCR20233;RCR20511" "" 0 "" "" "HMR_1629"
"MAR01631" "" "" "" "" "R-HSA-192325" "HMR_1631" "MNXR125295" "HMR_1631" "RCR20512" "" 0 "" "" "HMR_1631"
"MAR01632" "R08734" "" "RE2624X" "" "R-HSA-192056" "AMACRp;RE2624X" "MNXR112240" "HMR_1632" "RCR10915" "" 0 "RHEA:40456" "RHEA:40455" "HMR_1632"
-"MAR01635" "R08734" "" "RE2624M" "" "R-HSA-192056" "HMR_1635;RE2624M" "MNXR112240" "HMR_1635" "RCR13606" "" 0 "RHEA:40456" "RHEA:40455" "HMR_1635"
-"MAR01637" "" "" "RE3247M" "r0706" "R-HSA-192335" "HMR_1637;RE3247M" "MNXR105369;MNXR124225" "HMR_1637" "RCR13607" "" 0 "" "" "HMR_1637"
-"MAR01638" "" "ACOX2x" "" "" "" "ACOX2x" "" "HMR_1638" "RCR10916" "" 0 "" "" "HMR_1638"
-"MAR01639" "" "" "RE3247X" "r0706" "R-HSA-192335" "RE3247X;r0706" "MNXR105369;MNXR124225" "HMR_1639" "RCR10917" "" 0 "" "" "HMR_1639"
+"MAR01638" "" "ACOX2x" "RE3247X" "r0706" "R-HSA-192335" "ACOX2x;RE3247X;r0706" "MNXR105369;MNXR124225" "HMR_1638;HMR_1639" "RCR10916;RCR10917" "" 0 "" "" "HMR_1638;HMR_1639;MAR01639"
"MAR01642" "R04813" "" "" "r0744" "R-HSA-192331" "r0744" "MNXR105377;MNXR109137;MNXR115598" "HMR_1642" "RCR10918" "" 0 "" "RHEA:18933" "HMR_1642"
"MAR01646" "R04812" "" "" "r0743" "" "r0743" "MNXR105376;MNXR109136" "HMR_1646" "RCR13608" "" 0 "" "" "HMR_1646"
"MAR01652" "R03719" "SCPx" "R03719X" "r0628" "" "SCPx" "MNXR104297;MNXR108369" "HMR_1652" "RCR13609" "" 0 "" "RHEA:16865" "HMR_1652"
-"MAR01653" "R03719" "SCPx" "R03719X" "r0628" "" "HMR_1653" "MNXR104297;MNXR108369" "HMR_1653" "RCR13610" "" 0 "" "RHEA:16865" "HMR_1653"
-"MAR01656" "" "" "" "r0990" "" "r0990" "MNXR105412" "HMR_1656" "RCR20134" "" 0 "" "" "HMR_1656"
"MAR01659" "" "" "" "r2501" "" "r2501" "MNXR106313" "HMR_1659" "RCR20234" "3.A.1.203.3" 0 "" "" "HMR_1659"
"MAR01660" "R07296" "" "RE1834C" "r0794" "" "RE1834C" "MNXR103558;MNXR110971" "HMR_1660" "RCR10217" "" 0 "RHEA:14542" "RHEA:14541" "HMR_1660"
-"MAR01662" "R07296" "" "RE1834M" "" "" "RE1834M" "MNXR103558;MNXR110971" "HMR_1662" "RCR13611" "" 0 "RHEA:14542" "RHEA:14541" "HMR_1662"
-"MAR01663" "R07296" "" "RE1834X" "" "" "RE1834X" "MNXR103558;MNXR110971" "HMR_1663" "RCR13612" "" 0 "RHEA:14542" "RHEA:14541" "HMR_1663"
-"MAR01665" "" "" "" "" "R-HSA-193399" "HMR_1665" "MNXR125298" "HMR_1665" "RCR20513" "" 0 "RHEA:72683" "RHEA:72683" "HMR_1665"
-"MAR01666" "" "" "" "" "R-HSA-193399" "HMR_1666" "MNXR125298" "HMR_1666" "RCR20514" "" 0 "RHEA:72683" "RHEA:72683" "HMR_1666"
+"MAR01663" "R07296" "" "RE1834X;RE1834M" "" "" "RE1834X;RE1834M" "MNXR103558;MNXR110971" "HMR_1663;HMR_1662" "RCR13612;RCR13611" "" 0 "RHEA:14542" "RHEA:14541" "HMR_1663;HMR_1662;MAR01662"
+"MAR01665" "" "" "" "" "R-HSA-193399" "HMR_1665;HMR_1666" "MNXR125298" "HMR_1665;HMR_1666" "RCR20513;RCR20514" "" 0 "RHEA:72683" "RHEA:72683" "HMR_1665;HMR_1666;MAR01666"
"MAR01667" "R03720" "BAAT2x" "R03720C" "r0631" "" "BAAT2x" "MNXR108370;MNXR96203" "HMR_1667" "RCR10919" "" 0 "" "" "HMR_1667"
"MAR01668" "R03720" "" "R03720C" "r0630" "" "r0630" "MNXR108370;MNXR96203" "HMR_1668" "RCR13613" "" 0 "" "" "HMR_1668"
"MAR01670" "R03718" "" "" "r0629" "" "r0629" "MNXR108368;MNXR96202" "HMR_1670" "RCR10218" "" 0 "" "RHEA:14001" "HMR_1670"
@@ -4105,7 +4059,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01702" "" "" "" "r1012" "" "" "MNXR105423" "HMR_1702" "RCR20518" "" 0 "" "" "HMR_1702"
"MAR01703" "R08739" "" "" "" "R-HSA-193452" "HMR_1703" "MNXR124748" "HMR_1703" "RCR13627" "" 0 "" "" "HMR_1703"
"MAR01704" "" "" "" "" "R-HSA-193369" "HMR_1704" "MNXR124227" "HMR_1704" "RCR13628" "" 0 "" "" "HMR_1704"
-"MAR01706" "R04809" "" "" "" "R-HSA-193535" "HMR_1706" "MNXR123029" "HMR_1706" "RCR13629" "" 0 "" "" "HMR_1706"
+"MAR01706" "R04809" "" "" "" "R-HSA-193535" "HMR_1706" "MNXR123029" "HMR_1706" "RCR13629" "" 0 "RHEA:47409" "RHEA:47408" "HMR_1706"
"MAR01708" "R04810" "" "" "r1021" "R-HSA-193508" "HMR_1708" "MNXR124228" "HMR_1708" "RCR13630" "" 0 "" "" "HMR_1708"
"MAR01710" "R04811" "" "" "" "R-HSA-193533" "HMR_1710" "MNXR109135" "HMR_1710" "RCR13631" "" 0 "" "" "HMR_1710"
"MAR01716" "R03974" "" "RE1835X" "" "" "RE1835X" "MNXR103559" "HMR_1716" "RCR14626" "" 0 "" "RHEA:31511" "HMR_1716"
@@ -4117,7 +4071,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01725" "" "" "" "r1018" "" "r1018" "MNXR105425" "HMR_1725" "RCR20519" "" 0 "" "" "HMR_1725"
"MAR01726" "R08743" "" "R03974C" "r0651" "" "r0651" "MNXR103559;MNXR105363" "HMR_1726" "RCR10220" "" 0 "" "RHEA:43764" "HMR_1726"
"MAR01727" "R08743" "" "R03974C" "r0650" "" "r0650" "MNXR103559;MNXR105363" "HMR_1727" "RCR13633" "" 0 "" "RHEA:43764" "HMR_1727"
-"MAR01729" "" "" "" "" "" "" "" "HMR_1729" "RCR10395" "" 0 "" "" "HMR_1729"
+"MAR01729" "" "HC02220c" "" "" "" "HC02220c" "" "HMR_1729" "RCR10395" "" 0 "" "" "HC02220c;HMR_1729;MAR10447"
"MAR01730" "" "" "" "" "" "HMR_1730" "" "HMR_1730" "RCR10396" "" 0 "" "" "HMR_1730"
"MAR01735" "R07207" "" "" "" "R-HSA-192061" "HMR_1735" "MNXR124223" "HMR_1735" "RCR13634" "" 0 "" "RHEA:22716" "HMR_1735"
"MAR01737" "" "" "" "" "R-HSA-192178" "HMR_1737" "MNXR124735" "HMR_1737" "RCR13635" "" 0 "" "" "HMR_1737"
@@ -4212,15 +4166,15 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01848" "R02794" "" "R02794C" "r0573" "" "r0573" "MNXR105352;MNXR107728" "HMR_1848" "RCR14646" "" 0 "RHEA:23535" "RHEA:23532" "HMR_1848"
"MAR01850" "" "" "" "r0970" "" "r0970" "MNXR105409" "HMR_1850" "RCR20238" "" 0 "" "" "HMR_1850"
"MAR01852" "" "" "" "r0992" "" "r0992" "MNXR105413" "HMR_1852" "RCR40316" "" 0 "" "" "HMR_1852"
-"MAR01853" "" "" "" "r0993" "" "" "MNXR105414" "HMR_1853" "RCR40170" "3.A.1.208.2" 0 "" "" "HMR_1853"
-"MAR01854" "" "" "" "r0994" "" "" "MNXR105415" "HMR_1854" "RCR20528" "" 0 "" "" "HMR_1854"
+"MAR01853" "" "r0993" "" "r0993" "" "r0993" "MNXR105414" "HMR_1853" "RCR40170" "3.A.1.208.2" 0 "" "" "HMR_1853;r0993;MAR02276"
+"MAR01854" "" "r0994" "" "r0994" "" "r0994" "MNXR105415" "HMR_1854" "RCR20528" "" 0 "" "" "HMR_1854;r0994;MAR02277"
"MAR01855" "" "" "" "r1015" "" "r1015" "" "HMR_1855" "RCR40954" "" 0 "" "" "HMR_1855"
"MAR01857" "" "" "" "r1017" "" "" "MNXR104744" "HMR_1857" "RCR40318" "" 0 "" "" "HMR_1857"
"MAR01859" "" "" "" "r1027" "" "r1027" "MNXR105430" "HMR_1859" "RCR40172" "" 0 "" "" "HMR_1859"
"MAR01861" "" "" "" "r1029" "" "" "MNXR105431" "HMR_1861" "RCR40147" "" 0 "" "" "HMR_1861"
"MAR01862" "" "" "" "r1163" "" "r1163" "" "HMR_1862" "RCR40955" "2.A.28.1.1" 0 "" "" "HMR_1862"
"MAR01863" "" "GCHOLAt2" "" "r1494" "" "GCHOLAt2" "MNXR100071" "HMR_1863" "RCR40956" "2.A.28.1.1" 0 "" "" "HMR_1863"
-"MAR01864" "" "" "" "r1495" "" "" "MNXR105478" "HMR_1864" "RCR40957" "2.A.28.1.1" 0 "" "" "HMR_1864"
+"MAR01864" "" "r1495" "" "r1495" "" "r1495" "MNXR105478" "HMR_1864" "RCR40957" "2.A.28.1.1" 0 "" "" "HMR_1864;r1495;MAR02384"
"MAR01865" "" "TCHOLAt2" "" "r1496" "" "TCHOLAt2" "MNXR104743" "HMR_1865" "RCR40958" "2.A.28.1.1" 0 "" "" "HMR_1865"
"MAR01866" "" "" "" "r1497" "" "r1497" "MNXR105479" "HMR_1866" "RCR40959" "2.A.28.1.1" 0 "" "" "HMR_1866"
"MAR01867" "" "" "" "r1498" "" "r1498" "MNXR105480" "HMR_1867" "RCR40960" "2.A.28.1.1" 0 "" "" "HMR_1867"
@@ -4239,9 +4193,9 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01883" "" "" "" "r2154" "" "r2154" "MNXR106051" "HMR_1883" "RCR40331" "2.A.60.1.14" 0 "" "" "HMR_1883"
"MAR01884" "" "" "" "r2155" "" "r2155" "MNXR106052" "HMR_1884" "RCR40332" "2.A.60.1.14" 0 "" "" "HMR_1884"
"MAR01885" "" "" "" "r2156" "" "r2156" "MNXR106053" "HMR_1885" "RCR40333" "2.A.60.1.14" 0 "" "" "HMR_1885"
-"MAR01886" "" "" "" "r2157" "" "" "MNXR106054" "HMR_1886" "RCR40334" "2.A.60.1.14" 0 "" "" "HMR_1886"
-"MAR01887" "" "" "" "r2158" "" "" "MNXR106055" "HMR_1887" "RCR40335" "2.A.60.1.14" 0 "" "" "HMR_1887"
-"MAR01888" "" "" "" "r2159" "" "" "MNXR106056" "HMR_1888" "RCR40336" "2.A.60.1.14" 0 "" "" "HMR_1888"
+"MAR01886" "" "r2157" "" "r2157" "" "r2157" "MNXR106054" "HMR_1886" "RCR40334" "2.A.60.1.14" 0 "" "" "HMR_1886;r2157;MAR02390"
+"MAR01887" "" "r2158" "" "r2158" "" "r2158" "MNXR106055" "HMR_1887" "RCR40335" "2.A.60.1.14" 0 "" "" "HMR_1887;r2158;MAR02392"
+"MAR01888" "" "r2159" "" "r2159" "" "r2159" "MNXR106056" "HMR_1888" "RCR40336" "2.A.60.1.14" 0 "" "" "HMR_1888;r2159;MAR02394"
"MAR01889" "" "" "" "r2160" "" "r2160" "MNXR106057" "HMR_1889" "RCR40337" "2.A.60.1.14" 0 "" "" "HMR_1889"
"MAR01890" "" "" "" "r2161" "" "r2161" "MNXR106058" "HMR_1890" "RCR40338" "2.A.60.1.14" 0 "" "" "HMR_1890"
"MAR01891" "" "" "" "r2162" "" "r2162" "MNXR106059" "HMR_1891" "RCR40339" "2.A.60.1.14" 0 "" "" "HMR_1891"
@@ -4542,8 +4496,8 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR07669" "" "APOCF" "" "" "" "APOCF" "MNXR95887" "HMR_7669" "RCR13841" "" 0 "" "" "HMR_7669"
"MAR07670" "R05145" "BTNPL" "" "" "" "BTNPL" "MNXR109352;MNXR96332" "HMR_7670" "RCR13842" "" 0 "" "RHEA:59732" "HMR_7670"
"MAR07671" "R04869" "APOC_LYS_BTNP" "" "" "" "APOC_LYS_BTNP" "MNXR109178" "HMR_7671" "RCR13843" "" 0 "" "" "HMR_7671"
-"MAR07672" "R04385" "" "" "" "" "" "MNXR96330" "HMR_7672" "RCR13844" "" 0 "" "RHEA:13501" "HMR_7672"
-"MAR07673" "R04386" "" "" "" "" "" "MNXR95220" "HMR_7673" "RCR13845" "" 0 "" "RHEA:54728" "HMR_7673"
+"MAR07672" "R04385" "" "" "" "" "" "MNXR96330" "HMR_7672" "RCR13844" "" 0 "" "RHEA:13501" "HMR_7672;MAR04156"
+"MAR07673" "R04386" "" "" "" "" "" "MNXR95220" "HMR_7673" "RCR13845" "" 0 "" "RHEA:54728" "HMR_7673;MAR01456"
"MAR04160" "R00424" "GTPCI" "R00424C" "r0117" "" "GTPCI" "MNXR100453" "HMR_4160" "RCR13846" "" 0 "" "RHEA:17473" "HMR_4160"
"MAR04162" "R00424" "GTPCIn" "R00424C" "r0118" "" "GTPCIn" "MNXR100453" "HMR_4162" "RCR14687" "" 0 "" "RHEA:17473" "HMR_4162"
"MAR04163" "R04286" "PTHPS" "R04286C" "r0674" "" "PTHPS" "MNXR103331" "HMR_4163" "RCR10975" "" 0 "" "RHEA:22048" "HMR_4163"
@@ -4566,7 +4520,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04834" "R05046" "" "R05046C" "r0776" "" "r0776" "MNXR105382" "HMR_4834" "RCR14690" "" 0 "" "" "HMR_4834"
"MAR04835" "R05048" "" "R05048C" "r0777" "" "r0777" "MNXR105383" "HMR_4835" "RCR13860" "" 0 "" "" "HMR_4835"
"MAR04836" "R05048" "" "R05048C" "r0778" "" "r0778" "MNXR105383" "HMR_4836" "RCR13861" "" 0 "" "" "HMR_4836"
-"MAR08538" "R04734" "THBPT4ACAMDASE" "" "" "" "THBPT4ACAMDASE" "MNXR104802" "HMR_8538" "RCR10142" "" 0 "" "RHEA:11920" "HMR_8538"
+"MAR08538" "R04734" "THBPT4ACAMDASE" "" "" "" "THBPT4ACAMDASE" "MNXR104802" "HMR_8538" "RCR10142" "" 0 "" "RHEA:11920" "HMR_8538;MAR03940"
"MAR08738" "R04286" "PTHPSn" "" "" "" "PTHPSn" "MNXR103331" "HMR_8738" "RCR14691" "" 0 "" "RHEA:22048" "HMR_8738"
"MAR08739" "R08208" "SPRn" "" "" "" "SPRn" "MNXR104500" "HMR_8739" "RCR14692" "" 0 "" "RHEA:32627" "HMR_8739"
"MAR08740" "" "DIGALSGALSIDEtg" "" "" "" "DHPR2" "MNXR97459" "HMR_8740" "RCR13862" "" 0 "" "" "HMR_8740"
@@ -4607,7 +4561,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR08634" "R02393" "BILIRED" "" "" "" "BILIRED" "MNXR96259" "HMR_8634" "RCR13880" "" 0 "" "RHEA:15793" "HMR_8634"
"MAR09717" "R03684" "" "" "" "" "HMR_9717" "MNXR108338" "HMR_9717" "RCR14697" "" 0 "" "" "HMR_9717"
"MAR06630" "R08379" "" "" "" "" "RDH1a" "MNXR103440" "HMR_6630" "RCR13881" "" 0 "" "RHEA:25033" "HMR_6630"
-"MAR06631" "R02124" "" "" "" "" "RDH1" "MNXR103439" "HMR_6631" "RCR10422" "" 0 "" "RHEA:21284" "HMR_6631"
+"MAR06631" "R02124" "HMR_6633;RDH1;R_HMR_6633;R_RDH1;R_TRETINOLOR1;TRETINOLOR1" "" "" "" "RDH1" "MNXR103439;MNXR189842" "HMR_6631" "RCR10422" "" 0 "" "RHEA:21284" "HMR_6631;MAR20002"
"MAR06632" "R08379" "" "" "" "" "HMR_6632" "MNXR103440" "HMR_6632" "RCR13882" "" 0 "" "RHEA:25033" "HMR_6632"
"MAR06633" "R02124" "" "" "" "" "HMR_6633" "MNXR103439" "HMR_6633" "RCR14698" "" 0 "" "RHEA:21284" "HMR_6633"
"MAR06634" "" "" "" "" "" "HMR_6634" "" "HMR_6634" "RCR13883" "" 0 "" "" "HMR_6634"
@@ -4949,19 +4903,14 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR06536" "" "" "RE2514C" "" "" "RE2514C" "MNXR103688" "HMR_6536" "RCR14123" "" 0 "" "" "HMR_6536"
"MAR09569" "R03024" "" "R03024C" "r0587" "" "r0587" "MNXR105353;MNXR107896" "HMR_9569" "RCR30521" "" 0 "" "RHEA:21664" "HMR_9569"
"MAR03955" "R10092" "HCO3E" "" "" "" "H2CO3D" "MNXR100482" "HMR_3955" "RCR10229" "" 0 "RHEA:10750" "RHEA:10748" "HMR_3955"
-"MAR03984" "R00009" "CATp" "" "r0012" "" "CATp" "MNXR96455" "HMR_3984" "RCR11007" "" 0 "RHEA:20310" "RHEA:20309" "HMR_3984"
+"MAR03984" "R00009" "CAT;CATm;CATp;CATpp;CATr;R_CAT;R_CATm;R_CATp;R_CATpp;R_CATr" "" "r0012" "" "CATp" "MNXR96455" "HMR_3984" "RCR11007" "" 0 "RHEA:20310" "RHEA:20309" "HMR_3984;MAR20066"
"MAR04201" "R00602" "PRDX" "R00602C" "r0162" "" "PRDX" "MNXR103159" "HMR_4201" "RCR14124" "" 0 "RHEA:30692" "RHEA:30691" "HMR_4201"
"MAR04202" "R00605" "ALCD1" "" "" "" "ALCD1" "MNXR95708" "HMR_4202" "RCR14125" "" 0 "RHEA:19402" "RHEA:19401" "HMR_4202"
"MAR05127" "" "" "" "r1085" "" "" "" "HMR_5127" "RCR14752" "" 1 "" "" "HMR_5127"
"MAR05128" "" "EX_nh4_e" "" "r1086" "" "" "MNXR98786" "HMR_5128" "RCR30284" "" 0 "" "" "HMR_5128"
"MAR05363" "R00138" "PPA2" "" "r1296" "" "PPA2" "MNXR103069" "HMR_5363" "RCR11008" "" 0 "" "RHEA:14157" "HMR_5363"
-"MAR05406" "R00132" "H2CO3D" "" "r1417" "" "H2CO3D" "MNXR100482" "HMR_5406" "RCR14126" "" 0 "" "RHEA:10748" "HMR_5406"
-"MAR05409" "" "" "" "r1420" "" "HMR_5409" "" "HMR_5409" "RCR30285" "" 0 "" "" "HMR_5409"
"MAR07794" "R00004" "PPAn" "" "" "" "PPAn" "MNXR100808" "HMR_7794" "RCR10436" "" 0 "RHEA:24577" "RHEA:24576" "HMR_7794"
"MAR08617" "R00138" "PPA2m" "" "" "" "PPA2m" "MNXR103069" "HMR_8617" "RCR14127" "" 0 "" "RHEA:14157" "HMR_8617"
-"MAR08749" "" "H2CO3D2" "" "" "" "HMR_8749" "MNXR100483" "HMR_8749" "RCR14128" "" 1 "" "" "HMR_8749"
-"MAR08750" "" "H2CO3D2m" "" "" "" "HMR_8750" "MNXR100483" "HMR_8750" "RCR14129" "" 1 "" "" "HMR_8750"
-"MAR08751" "R00132" "H2CO3Dm" "" "" "" "H2CO3Dm" "MNXR100482" "HMR_8751" "RCR14130" "" 0 "" "RHEA:10748" "HMR_8751"
"MAR08752" "" "PRDXl" "" "" "" "PRDXl" "MNXR103159" "HMR_8752" "RCR14131" "" 0 "RHEA:30692" "RHEA:30691" "HMR_8752"
"MAR07741" "R01195" "" "" "" "" "HMR_7741" "MNXR99609" "HMR_7741" "RCR14753" "" 0 "" "RHEA:20125" "HMR_7741"
"MAR09464" "R01791" "" "" "" "" "HMR_9464" "MNXR107171" "HMR_9464" "RCR14754" "" 0 "" "" "HMR_9464"
@@ -5245,7 +5194,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00400" "" "LNLNCGt" "" "r1297" "" "LNLNCGt" "MNXR101114" "HMR_0400" "RCR40406" "4.C.1.1.5;4.C.1.1.8" 0 "" "" "HMR_0400"
"MAR00403" "" "" "" "r1520" "" "r1520" "MNXR105492" "HMR_0403" "RCR40407" "3.A.1.211.1" 0 "" "" "HMR_0403"
"MAR00404" "" "DLNLCGt" "" "r1366" "" "DLNLCGt" "" "HMR_0404" "RCR40408" "4.C.1.1.5;4.C.1.1.8" 0 "" "" "HMR_0404"
-"MAR00407" "" "" "" "r1525" "" "r1525" "MNXR105496" "HMR_0407" "RCR40409" "3.A.1.211.1" 0 "" "" "HMR_0407"
+"MAR00407" "" "" "" "r1525" "" "CE2516t;r1525" "MNXR105496" "HMR_0407" "RCR40409" "3.A.1.211.1" 0 "" "" "CE2516t;HMR_0407;MAR10164"
"MAR00408" "" "ARACHDt2" "" "r0930" "" "ARACHDt2" "MNXR95918" "HMR_0408" "RCR40043" "4.C.1.1.5;4.C.1.1.8" 0 "" "" "HMR_0408"
"MAR00411" "" "" "" "r1514" "" "r1514" "MNXR105486" "HMR_0411" "RCR40203" "3.A.1.211.1" 0 "" "" "HMR_0411"
"MAR00412" "" "ADRNt" "" "" "" "ADRNt" "" "HMR_0412" "RCR40059" "4.C.1.1.5;4.C.1.1.8" 0 "" "" "HMR_0412"
@@ -5262,7 +5211,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00435" "" "" "" "" "" "HMR_0435" "" "HMR_0435" "RCR40209" "3.A.1.211.1" 0 "" "" "HMR_0435"
"MAR00436" "" "" "" "" "" "HMR_0436" "" "HMR_0436" "RCR40106" "4.C.1.1.5;4.C.1.1.8" 0 "" "" "HMR_0436"
"MAR00439" "" "" "" "" "" "HMR_0439" "" "HMR_0439" "RCR40210" "3.A.1.211.1" 0 "" "" "HMR_0439"
-"MAR00440" "" "" "" "" "" "" "" "HMR_0440" "RCR40410" "" 0 "" "" "HMR_0440"
+"MAR00440" "" "PHYTt" "" "" "" "PHYTt" "MNXR102660" "HMR_0440" "RCR40410" "" 0 "" "" "HMR_0440;PHYTt;;MAR01617"
"MAR00444" "" "GLYCt" "" "r0903" "" "GLYCt;GLYCTDle" "MNXR100343" "HMR_0444" "RCR40411" "" 0 "RHEA:29678" "RHEA:29675" "HMR_0444"
"MAR00469" "" "" "" "r1509" "" "HMR_0469" "" "HMR_0469" "RCR40966" "3.A.1.201.3" 0 "" "" "HMR_0469"
"MAR00470" "" "PCt" "" "r1511" "" "HMR_0470" "MNXR102419" "HMR_0470" "RCR40412" "3.A.1.201.3" 0 "" "" "HMR_0470"
@@ -5412,13 +5361,11 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR05240" "" "" "" "" "" "HMR_5240" "" "HMR_5240" "RCR40149" "" 0 "" "" "HMR_5240"
"MAR05241" "" "" "" "r1084" "" "HMR_5241" "" "HMR_5241" "RCR40150" "" 0 "" "" "HMR_5241"
"MAR05246" "" "" "" "" "" "HMR_5246" "" "HMR_5246" "RCR40482" "" 0 "" "" "HMR_5246"
-"MAR05295" "" "" "" "r1110" "" "NaKt" "" "HMR_5295" "RCR41002" "" 0 "" "" "HMR_5295"
"MAR05296" "" "MEOHt2" "" "r1111" "" "MEOHt2" "MNXR101464" "HMR_5296" "RCR40483" "" 0 "RHEA:34874" "RHEA:34871" "HMR_5296"
"MAR05303" "" "" "" "r1116" "" "r1116" "MNXR96140" "HMR_5303" "RCR40226" "" 0 "" "" "HMR_5303"
"MAR05305" "" "ALAt4" "" "r1118" "" "ALAt4" "MNXR95692" "HMR_5305" "RCR41003" "2.A.18.6.7" 0 "" "" "HMR_5305"
"MAR05307" "" "ALAtN1" "" "" "" "ALAtN1" "MNXR95705" "HMR_5307" "RCR41004" "" 0 "" "" "HMR_5307"
"MAR05308" "" "GLNt4" "" "r1119" "" "GLNt4" "MNXR100261" "HMR_5308" "RCR41005" "2.A.18.6.5" 0 "" "" "HMR_5308"
-"MAR05310" "" "GLNtN1" "" "" "" "GLNtN1" "MNXR100263" "HMR_5310" "RCR41006" "" 0 "" "" "HMR_5310"
"MAR05311" "" "ASNt4" "" "r1120" "" "ASNt4" "MNXR96057" "HMR_5311" "RCR41007" "2.A.18.6.7" 0 "" "" "HMR_5311"
"MAR05313" "" "ASNtN1" "" "" "" "ASNtN1" "MNXR96068" "HMR_5313" "RCR41008" "" 0 "" "" "HMR_5313"
"MAR05314" "" "VALt4" "" "r1121" "" "VALt4" "MNXR105189" "HMR_5314" "RCR41009" "2.A.1.44.1" 0 "" "" "HMR_5314"
@@ -5436,7 +5383,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR05332" "" "GLUVESSEC" "" "" "" "GLUVESSEC" "MNXR100297" "HMR_5332" "RCR40227" "" 0 "" "" "HMR_5332"
"MAR05333" "" "HISt4" "" "r1145" "" "HISt4" "MNXR100646" "HMR_5333" "RCR41021" "2.A.18.6.5" 0 "" "" "HMR_5333"
"MAR05335" "" "HIStN1" "" "" "" "HIStN1" "MNXR100648" "HMR_5335" "RCR41022" "" 0 "" "" "HMR_5335"
-"MAR05413" "" "PIt2r" "" "" "" "PIt6b" "MNXR102872" "HMR_5413" "RCR41023" "" 0 "RHEA:29941" "RHEA:29939" "HMR_5413"
"MAR05429" "" "NaKt" "" "r1489" "" "" "MNXR102073" "HMR_5429" "RCR41024" "3.A.3.1.1" 0 "" "" "HMR_5429"
"MAR05430" "" "NAt3_1" "" "r1490" "" "NAt3_1" "MNXR101803" "HMR_5430" "RCR41025" "2.A.36.1.1" 0 "" "" "HMR_5430"
"MAR05432" "" "HCO3_NAt" "" "r1491" "" "HCO3_NAt" "MNXR100485" "HMR_5432" "RCR41026" "2.A.31.2.1" 0 "" "" "HMR_5432"
@@ -6141,9 +6087,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR06139" "" "" "" "r2233" "" "r2233" "MNXR106130" "HMR_6139" "RCR40592" "2.A.60.1.5" 0 "" "" "HMR_6139"
"MAR06140" "" "" "" "r2234" "" "r2234" "MNXR106131" "HMR_6140" "RCR40593" "2.A.60.1.5" 0 "" "" "HMR_6140"
"MAR06141" "" "" "" "r2235" "" "r2235" "MNXR106132" "HMR_6141" "RCR40594" "2.A.60.1.5" 0 "" "" "HMR_6141"
-"MAR06142" "" "" "" "r2236" "" "" "MNXR106133" "HMR_6142" "RCR40595" "2.A.60.1.5" 0 "" "" "HMR_6142"
-"MAR06143" "" "" "" "r2237" "" "" "MNXR106134" "HMR_6143" "RCR40596" "2.A.60.1.5" 0 "" "" "HMR_6143"
-"MAR06144" "" "" "" "r2238" "" "" "MNXR106135" "HMR_6144" "RCR40597" "2.A.60.1.5" 0 "" "" "HMR_6144"
"MAR06145" "" "" "" "r2239" "" "r2239" "MNXR106136" "HMR_6145" "RCR40598" "2.A.60.1.5" 0 "" "" "HMR_6145"
"MAR06146" "" "" "" "r2240" "" "r2240" "MNXR106137" "HMR_6146" "RCR40599" "2.A.60.1.5" 0 "" "" "HMR_6146"
"MAR06147" "" "" "" "r2241" "" "r2241" "MNXR106138" "HMR_6147" "RCR40600" "2.A.60.1.5" 0 "" "" "HMR_6147"
@@ -6219,7 +6162,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR06217" "" "" "" "r2312" "" "r2312" "MNXR106209" "HMR_6217" "RCR41502" "2.A.60.1.14" 0 "" "" "HMR_6217"
"MAR06218" "" "" "" "r2313" "" "r2313" "MNXR106210" "HMR_6218" "RCR40670" "2.A.60.1.2" 0 "" "" "HMR_6218"
"MAR06219" "" "" "" "r2314" "" "r2314" "MNXR106211" "HMR_6219" "RCR40671" "2.A.60.1.2" 0 "" "" "HMR_6219"
-"MAR06220" "" "" "" "r2315" "" "" "MNXR106212" "HMR_6220" "RCR40672" "2.A.60.1.2" 0 "" "" "HMR_6220"
"MAR06221" "" "" "" "r2316" "" "r2316" "MNXR106213" "HMR_6221" "RCR40673" "2.A.60.1.2" 0 "" "" "HMR_6221"
"MAR06222" "" "" "" "r2317" "" "r2317" "MNXR106214" "HMR_6222" "RCR40674" "2.A.60.1.2" 0 "" "" "HMR_6222"
"MAR06223" "" "" "" "r2318" "" "r2318" "MNXR106215" "HMR_6223" "RCR40675" "2.A.60.1.2" 0 "" "" "HMR_6223"
@@ -6251,7 +6193,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR06249" "" "" "" "r2343" "" "r2343" "MNXR97397" "HMR_6249" "RCR40696" "" 0 "" "" "HMR_6249"
"MAR06250" "" "" "" "r2344" "" "r2344" "MNXR96253" "HMR_6250" "RCR40055" "" 0 "" "" "HMR_6250"
"MAR06251" "" "" "" "r2345" "" "LEUKTRD4t" "" "HMR_6251" "RCR40697" "" 0 "" "" "HMR_6251"
-"MAR06252" "" "" "" "r2346" "" "" "MNXR106235" "HMR_6252" "RCR40129" "" 0 "" "" "HMR_6252"
"MAR06253" "" "" "" "r2347" "" "r2347" "MNXR106236" "HMR_6253" "RCR40698" "" 0 "RHEA:50995" "RHEA:50992" "HMR_6253"
"MAR06254" "" "" "" "r2348" "" "LEUKTRA4t" "" "HMR_6254" "RCR40699" "" 0 "" "" "HMR_6254"
"MAR06255" "" "" "" "r2349" "" "LEUKTRB4t" "" "HMR_6255" "RCR40274" "" 0 "" "" "HMR_6255"
@@ -6302,13 +6243,12 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR06375" "" "SERt4" "" "r2474" "" "SERt4" "MNXR104346" "HMR_6375" "RCR41525" "2.A.18.6.5" 0 "" "" "HMR_6375"
"MAR06377" "" "CYSt4" "" "r2475" "" "CYSt4" "MNXR97028" "HMR_6377" "RCR41526" "2.A.18.6.5" 0 "" "" "HMR_6377"
"MAR06379" "" "HOMt4" "" "r2476" "" "HOMt4" "MNXR100677" "HMR_6379" "RCR41527" "2.A.18.6.5" 0 "" "" "HMR_6379"
-"MAR06380" "" "GLNt4" "" "r2477" "" "" "MNXR100261" "HMR_6380" "RCR41528" "2.A.18.6.2" 0 "" "" "HMR_6380"
+"MAR06380" "" "GLNt4;GLNtN1" "" "r2477" "" "GLNtN1" "MNXR100261;MNXR100263" "HMR_6380;HMR_5310" "RCR41528;RCR41006" "2.A.18.6.2" 0 "" "" "HMR_6380;HMR_5310;MAR05310"
"MAR06381" "" "SERt4" "" "r2478" "" "" "MNXR104346" "HMR_6381" "RCR41529" "2.A.18.6.8" 0 "" "" "HMR_6381"
"MAR06382" "" "ASNt4" "" "r2479" "" "" "MNXR96057" "HMR_6382" "RCR41530" "2.A.18.6.8" 0 "" "" "HMR_6382"
"MAR06383" "" "HOMt4" "" "r2480" "" "" "MNXR100677" "HMR_6383" "RCR41531" "2.A.18.6.8" 0 "" "" "HMR_6383"
"MAR06384" "" "HISt4" "" "r2481" "" "HISSNAT5tc" "MNXR100646" "HMR_6384" "RCR41532" "2.A.18.6.2" 0 "" "" "HMR_6384"
"MAR06392" "" "" "" "r2505" "" "r2505" "MNXR106316" "HMR_6392" "RCR41533" "3.A.1.208.8" 0 "" "" "HMR_6392"
-"MAR06406" "" "LIPOti" "RT1089" "" "" "" "MNXR101093" "HMR_6406" "RCR41534" "" 0 "" "" "HMR_6406"
"MAR06424" "" "AVITE2t" "RT1352" "" "" "AVITE2t" "MNXR96147" "HMR_6424" "RCR40703" "" 0 "" "" "HMR_6424"
"MAR06439" "" "" "" "" "" "HMR_6439" "" "HMR_6439" "RCR40704" "" 0 "" "" "HMR_6439"
"MAR06462" "" "" "" "" "" "YVITEt" "" "HMR_6462" "RCR40705" "" 0 "" "" "HMR_6462"
@@ -6642,7 +6582,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR09605" "" "" "" "" "" "HMR_9605" "" "HMR_9605" "RCR41621" "" 0 "" "" "HMR_9605"
"MAR09606" "" "" "" "" "" "GLYSNAT5tc" "" "HMR_9606" "RCR41622" "" 0 "" "" "HMR_9606"
"MAR09607" "" "" "" "" "" "HMR_9607" "" "HMR_9607" "RCR41623" "" 0 "" "" "HMR_9607"
-"MAR09608" "" "" "" "" "" "HMR_9608" "" "HMR_9608" "RCR41624" "" 0 "" "" "HMR_9608"
+"MAR09608" "" "LIPOti" "RT1089" "" "" "HMR_9608;LIPOti" "MNXR101093" "HMR_9608;HMR_6406" "RCR41624;RCR41534" "" 0 "RHEA:73380" "RHEA:73379" "HMR_9608;LIPOti;HMR_6406;MAR01483;MAR06406"
"MAR09609" "" "" "" "" "" "HMR_9609" "" "HMR_9609" "RCR41625" "" 0 "" "" "HMR_9609"
"MAR09610" "" "" "" "" "" "HMR_9610" "" "HMR_9610" "RCR41626" "" 0 "" "" "HMR_9610"
"MAR09611" "" "" "" "" "" "INSTt2r" "" "HMR_9611" "RCR40899" "" 0 "" "" "HMR_9611"
@@ -6923,7 +6863,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR07719" "" "Uritm" "" "" "" "Uritm" "MNXR105165" "HMR_7719" "RCR20632" "" 0 "" "" "HMR_7719"
"MAR07723" "" "CYTDtm" "" "" "" "CYTDtm" "MNXR97043" "HMR_7723" "RCR20633" "" 0 "" "" "HMR_7723"
"MAR07757" "" "" "RT0107" "" "" "HMR_7757" "" "HMR_7757" "RCR20634" "" 0 "" "" "HMR_7757"
-"MAR07758" "" "" "RT0402" "" "" "HMR_7758" "" "HMR_7758" "RCR20277" "" 0 "" "" "HMR_7758"
"MAR07760" "" "" "RT0468" "" "" "HMR_7760" "" "HMR_7760" "RCR21071" "" 0 "" "" "HMR_7760"
"MAR07769" "" "AMETt2m" "" "" "" "AMETt2m" "MNXR95811" "HMR_7769" "RCR20182" "" 0 "" "" "HMR_7769"
"MAR07804" "" "DNDPt29m" "" "" "" "DNDPt29m;DNDPt10m" "MNXR97628" "HMR_7804" "RCR20121" "" 0 "" "" "HMR_7804"
@@ -7069,7 +7008,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04890" "" "H2Otp" "" "r0852" "" "H2Otp" "MNXR98641" "HMR_4890" "RCR20016" "" 0 "RHEA:29670" "RHEA:29667" "HMR_4890"
"MAR04900" "" "O2tp" "" "r0857" "" "O2tp" "MNXR102090" "HMR_4900" "RCR20059" "" 0 "" "" "HMR_4900"
"MAR04908" "R00124" "r0860" "" "r0860" "" "r0860" "MNXR96123" "HMR_4908" "RCR20198" "" 0 "RHEA:35002" "RHEA:34999" "HMR_4908"
-"MAR04915" "" "COAtp" "" "r0864" "" "COAtp" "MNXR96815" "HMR_4915" "RCR20004" "" 0 "" "" "HMR_4915"
"MAR04924" "" "CO2tp" "" "r0869" "" "CO2tp" "MNXR96810" "HMR_4924" "RCR20149" "" 0 "" "" "HMR_4924"
"MAR04930" "" "PYRt2p" "" "r0874" "" "PYRt2p" "MNXR103385" "HMR_4930" "RCR20123" "2.A.1.13.1;2.A.1.13.5" 0 "RHEA:64723" "RHEA:64720" "HMR_4930"
"MAR04945" "" "" "RT0324" "" "" "FORMCOAtx" "" "HMR_4945" "RCR20306" "" 0 "" "" "HMR_4945"
@@ -7090,15 +7028,8 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR07646" "" "DALAxt" "" "" "" "DALAxt" "MNXR95702" "HMR_7646" "RCR21081" "" 0 "" "" "HMR_7646"
"MAR07705" "" "GLYCLTtp" "" "" "" "GLYCLTtp" "MNXR100333" "HMR_7705" "RCR20712" "" 0 "" "" "HMR_7705"
"MAR07707" "" "GLXtp" "" "" "" "GLXtp" "MNXR100306" "HMR_7707" "RCR20200" "" 0 "" "" "HMR_7707"
-"MAR07771" "" "NADtpu" "" "" "" "NADtx" "MNXR101881" "HMR_7771" "RCR20023" "" 0 "" "" "HMR_7771"
-"MAR07775" "" "NADHtpu" "" "" "" "NADHtpu;NADtpu" "MNXR101881" "HMR_7775" "RCR20024" "" 0 "" "" "HMR_7775"
"MAR07777" "" "NADPtxu" "" "" "" "NADPtxu" "MNXR101896" "HMR_7777" "RCR20713" "" 0 "" "" "HMR_7777"
"MAR07779" "" "NADPHtxu" "" "" "" "NADPHtxu" "MNXR101894" "HMR_7779" "RCR20311" "" 0 "" "" "HMR_7779"
-"MAR07782" "" "ADPtx" "" "" "" "ADPtx" "MNXR95484" "HMR_7782" "RCR20201" "" 0 "" "" "HMR_7782"
-"MAR07783" "" "AMPtp" "" "" "" "AMPtp" "MNXR95830" "HMR_7783" "RCR20046" "" 0 "" "" "HMR_7783"
-"MAR07785" "" "ATPtx" "" "" "" "ATPtx" "MNXR96140" "HMR_7785" "RCR20040" "" 0 "" "" "HMR_7785"
-"MAR07788" "" "FADH2tx" "" "" "" "FADH2tx" "MNXR99212" "HMR_7788" "RCR20202" "" 0 "" "" "HMR_7788"
-"MAR07790" "" "FADtx" "" "" "" "FADtx" "MNXR99217" "HMR_7790" "RCR20203" "" 0 "" "" "HMR_7790"
"MAR07797" "" "AKGtp" "" "" "" "AKGtp" "MNXR95663" "HMR_7797" "RCR20150" "" 0 "" "" "HMR_7797"
"MAR08016" "" "LYStip" "" "" "" "LYStip" "MNXR101269" "HMR_8016" "RCR20033" "" 0 "" "" "HMR_8016"
"MAR08020" "" "THP2Ctp" "" "" "" "THP2Ctp" "MNXR104832" "HMR_8020" "RCR20714" "" 0 "" "" "HMR_8020"
@@ -7673,7 +7604,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR09034" "" "EX_glc__D_e" "" "" "" "EX_glc_D[e]" "" "HMR_9034" "RCR30315" "" 0 "" "" "HMR_9034"
"MAR09035" "" "EX_lnlc_e" "" "" "" "EX_lnlc[e]" "" "HMR_9035" "RCR30183" "" 0 "" "" "HMR_9035"
"MAR09036" "" "EX_lnlnca_e" "" "" "" "EX_lnlnca[e]" "" "HMR_9036" "RCR30035" "" 0 "" "" "HMR_9036"
-"MAR09037" "" "" "" "" "" "" "" "HMR_9037" "RCR30316" "" 0 "" "" "HMR_9037"
+"MAR09037" "" "EX_phyt_e" "" "" "" "EX_phyt[e]" "MNXR98853" "HMR_9037" "RCR30316" "" 0 "" "" "EX_phyt[e];HMR_9037;MAR00659"
"MAR09038" "" "EX_his__L_e" "" "" "" "EX_his_L[e]" "" "HMR_9038" "RCR30527" "" 0 "" "" "HMR_9038"
"MAR09039" "" "EX_ile__L_e" "" "" "" "EX_ile_L[e]" "" "HMR_9039" "RCR30528" "" 0 "" "" "HMR_9039"
"MAR09040" "" "EX_leu__L_e" "" "" "" "EX_leu_L[e]" "" "HMR_9040" "RCR30529" "" 0 "" "" "HMR_9040"
@@ -8103,7 +8034,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR09730" "" "" "" "" "" "EX_HC00001[e]" "" "HMR_9730" "RCR30245" "" 0 "" "" "HMR_9730"
"MAR09725" "" "" "" "" "" "HMR_9725" "" "HMR_9725" "RCR21039" "" 0 "" "" "HMR_9725"
"MAR00031" "" "" "" "" "" "HMR_0031" "" "HMR_0031" "RCR14835" "" 0 "" "" "HMR_0031"
-"MAR00032" "" "" "" "" "" "HMR_0032" "" "HMR_0032" "RCR14836" "" 0 "" "" "HMR_0032"
"MAR00021" "" "" "" "" "" "biomass_components" "" "" "RCR21132" "" 0 "" "" "biomass_components"
"MAR00022" "" "" "" "" "" "cofactors_vitamins" "" "" "RCR21040" "" 0 "" "" "cofactors_vitamins"
"MAR00023" "" "" "" "" "" "vitaminA" "" "" "RCR21133" "" 0 "" "" "vitaminA"
@@ -8113,10 +8043,8 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00036" "" "" "" "" "" "arachidonates" "" "" "RCR21134" "" 0 "" "" "arachidonates"
"MAR00037" "" "" "" "" "" "steroids" "" "" "RCR21042" "" 0 "" "" "steroids"
"MAR00038" "" "10FTHFtm" "" "" "" "10FTHFtm" "MNXR94672" "" "" "" 0 "" "" "10FTHFtm"
-"MAR00039" "" "13DAMPPOX" "" "" "" "13DAMPPOX" "MNXR94687" "" "" "" 0 "" "" "13DAMPPOX"
"MAR00040" "" "34HPLFM" "" "" "" "34HPLFM" "MNXR94842" "" "" "" 0 "" "" "34HPLFM"
"MAR00041" "" "3DPHBH1" "" "" "" "3DPHBH1" "MNXR94864" "" "" "" 0 "" "" "3DPHBH1"
-"MAR00042" "" "3HBCOAHLm" "" "" "" "3HBCOAHLm" "MNXR94891" "" "" "" 0 "" "" "3HBCOAHLm"
"MAR00043" "" "3HPCOAHYD" "" "" "" "3HPCOAHYD" "MNXR94900" "" "" "" 0 "" "" "3HPCOAHYD"
"MAR00044" "" "3HPPD" "" "" "" "3HPPD" "MNXR94902" "" "" "" 0 "" "" "3HPPD"
"MAR00045" "" "3MOBt2im" "" "" "" "3MOBt2im" "MNXR94923" "" "" "" 0 "" "" "3MOBt2im"
@@ -8133,7 +8061,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00056" "" "ACACtx" "" "" "" "ACACtx" "MNXR95208" "" "" "" 0 "RHEA:29754" "RHEA:29751" "ACACtx"
"MAR00057" "" "ACCOAtr" "" "" "" "ACCOAtr" "MNXR95223" "" "" "" 0 "" "" "ACCOAtr"
"MAR00058" "" "ACHVESSEC" "" "" "" "ACHVESSEC" "MNXR95266" "" "" "" 0 "" "" "ACHVESSEC"
-"MAR00059" "" "ACOX22x" "" "" "" "ACOX22x" "MNXR95389" "" "" "" 0 "" "" "ACOX22x"
"MAR00060" "" "ACRNtm" "" "" "" "ACRNtm" "MNXR95412" "" "" "" 0 "" "" "ACRNtm"
"MAR00061" "" "ACt2m" "" "" "" "ACt2m" "MNXR95429" "" "" "" 0 "" "" "ACt2m"
"MAR00062" "" "ADPRDPm" "" "" "" "ADPRDPm" "MNXR95480" "" "" "" 0 "" "" "ADPRDPm"
@@ -8141,7 +8068,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00064" "" "ADRNCRNt" "" "" "" "ADRNCRNt" "MNXR95487" "" "" "" 0 "" "" "ADRNCRNt"
"MAR00065" "" "ADRNLPVESSEC" "" "" "" "ADRNLPVESSEC" "MNXR95488" "" "" "" 0 "" "" "ADRNLPVESSEC"
"MAR00066" "" "ALAt2rL" "" "" "" "ALAt2rL" "MNXR95704" "" "" "" 0 "" "" "ALAt2rL"
-"MAR00067" "" "ALDD21" "" "" "" "ALDD21" "MNXR95747" "" "" "" 0 "" "" "ALDD21"
+"MAR00067" "" "ALDD21;RE3076X;R_ALDD21;R_RE3076X" "" "" "" "ALDD21" "MNXR95747" "" "" "" 0 "RHEA:44016" "" "ALDD21"
"MAR00068" "" "ALKP" "" "" "" "ALKP" "MNXR95764" "" "" "" 0 "" "" "ALKP"
"MAR00069" "" "AMACR2p" "" "" "" "AMACR2p" "MNXR95798" "" "" "" 0 "" "" "AMACR2p"
"MAR00070" "" "AMACR2r" "" "" "" "AMACR2r" "MNXR95798" "" "" "" 0 "" "" "AMACR2r"
@@ -8170,7 +8097,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00093" "" "BTNt2m" "" "" "" "BTNt2m" "MNXR96334" "" "" "" 0 "" "" "BTNt2m"
"MAR00094" "" "BTNt3i" "" "" "" "BTNt3i" "MNXR96336" "" "" "" 0 "" "" "BTNt3i"
"MAR00095" "" "BTNt4i" "" "" "" "BTNt4i" "MNXR96337" "" "" "" 0 "" "" "BTNt4i"
-"MAR00096" "" "BUP2" "" "" "" "BUP2" "MNXR96346" "" "" "" 0 "" "" "BUP2"
"MAR00097" "" "BUTt2m" "" "" "" "BUTt2m" "MNXR96353" "" "" "" 0 "" "" "BUTt2m"
"MAR00098" "" "BVITEt" "" "" "" "BVITEt" "MNXR96355" "" "" "" 0 "" "" "BVITEt"
"MAR00099" "" "BZt" "" "" "" "BZt" "MNXR96370" "" "" "" 0 "RHEA:32814" "RHEA:32811" "BZt"
@@ -8262,8 +8188,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00480" "" "ENMAN4g" "" "" "" "ENMAN4g" "MNXR97929" "" "" "" 0 "" "" "ENMAN4g"
"MAR00485" "" "ENMAN5g" "" "" "" "ENMAN5g" "MNXR97930" "" "" "" 0 "" "" "ENMAN5g"
"MAR00554" "" "ENMAN6g" "" "" "" "ENMAN6g" "MNXR97931" "" "" "" 0 "" "" "ENMAN6g"
-"MAR00562" "" "ETF" "" "" "" "ETF" "MNXR97965" "" "" "" 0 "" "" "ETF"
-"MAR00563" "" "ETFQO" "" "" "" "ETFQO" "MNXR97966" "" "" "" 0 "" "" "ETFQO"
"MAR00564" "" "EX_1glyc_hs_e" "" "" "" "EX_1glyc_hs[e]" "MNXR97997" "" "" "" 0 "" "" "EX_1glyc_hs[e]"
"MAR00565" "" "EX_9_cis_retfa_e" "" "" "" "EX_9_cis_retfa[e]" "MNXR98098" "" "" "" 0 "" "" "EX_9_cis_retfa[e]"
"MAR00566" "" "EX_adrn_e" "" "" "" "EX_adrn[e]" "MNXR98235" "" "" "" 0 "" "" "EX_adrn[e]"
@@ -8276,7 +8200,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00573" "" "EX_crvnc_e" "" "" "" "EX_crvnc[e]" "MNXR98375" "" "" "" 0 "" "" "EX_crvnc[e]"
"MAR00574" "" "EX_dag_hs_e" "" "" "" "EX_dag_hs[e]" "MNXR98395" "" "" "" 0 "" "" "EX_dag_hs[e]"
"MAR00575" "" "EX_dcsptn1_e" "" "" "" "EX_dcsptn1[e]" "MNXR98401" "" "" "" 0 "" "" "EX_dcsptn1[e]"
-"MAR00576" "" "EX_dlnlcg_e" "" "" "" "EX_dlnlcg[e]" "MNXR98420" "" "" "" 0 "" "" "EX_dlnlcg[e]"
+"MAR00576" "" "EX_dlnlcg_e" "" "" "" "EX_CE2516[e];EX_dlnlcg[e]" "MNXR98420" "" "" "" 0 "" "" "EX_CE2516[e];EX_dlnlcg[e];MAR10433"
"MAR00577" "" "EX_eicostet_e" "" "" "" "EX_eicostet[e]" "MNXR98442" "" "" "" 0 "" "" "EX_eicostet[e]"
"MAR00583" "" "EX_elaid_e" "" "" "" "EX_elaid[e]" "MNXR98443" "" "" "" 0 "" "" "EX_elaid[e]"
"MAR00585" "" "EX_fucfuc12gal14acglcgalgluside_hs_e" "" "" "" "EX_fucfuc12gal14acglcgalgluside_hs[e]" "MNXR98508" "" "" "" 0 "" "" "EX_fucfuc12gal14acglcgalgluside_hs[e]"
@@ -8301,7 +8225,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00655" "" "EX_pchol_hs_e" "" "" "" "EX_pchol_hs[e]" "MNXR98826" "" "" "" 0 "" "" "EX_pchol_hs[e]"
"MAR00656" "" "EX_pe_hs_e" "" "" "" "EX_pe_hs[e]" "MNXR98829" "" "" "" 0 "" "" "EX_pe_hs[e]"
"MAR00658" "" "EX_pglyc_hs_e" "" "" "" "EX_pglyc_hs[e]" "MNXR98843" "" "" "" 0 "" "" "EX_pglyc_hs[e]"
-"MAR00659" "" "EX_phyt_e" "" "" "" "EX_phyt[e]" "MNXR98853" "" "" "" 0 "" "" "EX_phyt[e]"
"MAR00661" "" "EX_ps_hs_e" "" "" "" "EX_ps_hs[e]" "MNXR98877" "" "" "" 0 "" "" "EX_ps_hs[e]"
"MAR00662" "" "EX_ptdca_e" "" "" "" "EX_ptdca[e]" "MNXR98887" "" "" "" 0 "" "" "EX_ptdca[e]"
"MAR00666" "" "EX_retfa_e" "" "" "" "EX_retfa[e]" "MNXR98903" "" "" "" 0 "" "" "EX_retfa[e]"
@@ -8330,7 +8253,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00729" "" "FA182ACPH" "" "" "" "FA182ACPH" "MNXR99118" "" "" "" 0 "" "" "FA182ACPH"
"MAR00737" "" "FACOAL1813" "" "" "" "FACOAL1813" "MNXR99171" "" "" "" 0 "" "" "FACOAL1813"
"MAR00739" "" "FACOAL191" "" "" "" "FACOAL191" "MNXR99180" "" "" "" 0 "" "" "FACOAL191"
-"MAR00740" "" "FACOAL206" "" "" "" "FACOAL206" "MNXR99186" "" "" "" 0 "" "" "FACOAL206"
"MAR00742" "" "FACOAL40im" "" "" "" "FACOAL40im" "MNXR99200" "" "" "" 0 "" "" "FACOAL40im"
"MAR00743" "" "FAEL183" "" "" "" "FAEL183" "MNXR99218" "" "" "" 0 "" "" "FAEL183"
"MAR00745" "" "FAEL184" "" "" "" "FAEL184" "MNXR99220" "" "" "" 0 "" "" "FAEL184"
@@ -8397,7 +8319,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01083" "" "FUT18g" "" "" "" "FUT18g" "MNXR99731" "" "" "" 0 "" "" "FUT18g"
"MAR01118" "" "FUT34g" "" "" "" "FUT34g" "MNXR99739" "" "" "" 0 "" "" "FUT34g"
"MAR01141" "" "FUT93g" "" "" "" "FUT93g" "MNXR99751" "" "" "" 0 "" "" "FUT93g"
-"MAR01169" "" "G3PD2m" "" "" "" "G3PD2m" "MNXR99878" "" "" "" 0 "" "" "G3PD2m"
+"MAR01169" "R00849;R00848" "G3PD2m" "R00848C" "r0205" "" "G3PD2m;r0205;HMR_0482" "MNXR99878;MNXR106713;MNXR192664" "HMR_0483;HMR_0482" "RCR21050;RCR14578" "" 0 "" "RHEA:18977" "G3PD2m;HMR_0483;HMR_0482;MAR00482;MAR00483"
"MAR01314" "" "GABAVESSEC" "" "" "" "GABAVESSEC" "MNXR99916" "" "" "" 0 "" "" "GABAVESSEC"
"MAR01340" "" "GALFUCGALACGLCGAL14ACGLCGALGLUSIDEtg" "" "" "" "GALFUCGALACGLCGAL14ACGLCGALGLUSIDEtg" "MNXR99968" "" "" "" 0 "" "" "GALFUCGALACGLCGAL14ACGLCGALGLUSIDEtg"
"MAR01348" "" "GALGLUSIDEtg" "" "" "" "GALGLUSIDEtg" "MNXR99974" "" "" "" 0 "" "" "GALGLUSIDEtg"
@@ -8433,7 +8355,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01453" "" "HPYRR2x" "" "" "" "HPYRR2x" "MNXR100701" "" "" "" 0 "" "" "HPYRR2x"
"MAR01455" "" "HRETNtn" "" "" "" "HRETNtn" "MNXR100704" "" "" "" 0 "" "" "HRETNtn"
"MAR01456" "" "HSD17B42x" "" "" "" "HSD17B42x" "MNXR100718" "" "" "" 0 "" "" "HSD17B42x"
-"MAR01458" "" "HSD17B4x" "" "" "" "HSD17B4x" "MNXR100720" "" "" "" 0 "" "" "HSD17B4x"
"MAR01461" "" "Htr" "" "" "" "Htr" "MNXR100765" "" "" "" 0 "RHEA:34982" "RHEA:34979" "Htr"
"MAR01462" "" "Htx" "" "" "" "Htx" "MNXR100765" "" "" "" 0 "RHEA:34982" "RHEA:34979" "Htx"
"MAR01463" "" "HXANtl" "" "" "" "HXANtl" "MNXR100749" "" "" "" 0 "" "" "HXANtl"
@@ -8449,7 +8370,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01480" "" "LEUt5m" "" "" "" "LEUt5m" "MNXR101057" "" "" "" 0 "" "" "LEUt5m"
"MAR01481" "" "LGNCCPT2" "" "" "" "LGNCCPT2" "MNXR101063" "" "" "" 0 "" "" "LGNCCPT2"
"MAR01482" "" "LGNCCRNt" "" "" "" "LGNCCRNt" "MNXR101064" "" "" "" 0 "" "" "LGNCCRNt"
-"MAR01483" "" "LIPOti" "" "" "" "LIPOti" "MNXR101093" "" "" "" 0 "" "" "LIPOti"
"MAR01485" "" "L_LACtcm" "" "" "" "L_LACtcm" "MNXR100999" "" "" "" 0 "" "" "L_LACtcm"
"MAR01486" "" "LNELDCCRNt" "" "" "" "LNELDCCRNt" "MNXR101102" "" "" "" 0 "" "" "LNELDCCRNt"
"MAR01487" "" "LNLCCRNt" "" "" "" "LNLCCRNt" "MNXR101106" "" "" "" 0 "" "" "LNLCCRNt"
@@ -8468,7 +8388,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01511" "" "M4ATAer" "" "" "" "M4ATAer" "MNXR101312" "" "" "" 0 "" "" "M4ATAer"
"MAR01513" "" "M4BET2er" "" "" "" "M4BET2er" "MNXR101314" "" "" "" 0 "" "" "M4BET2er"
"MAR01514" "" "MAGt" "" "" "" "MAGt" "MNXR101333" "" "" "" 0 "" "" "MAGt"
-"MAR01515" "" "MAOX" "" "" "" "MAOX" "MNXR101406" "" "" "" 0 "RHEA:59421" "RHEA:59420" "MAOX"
"MAR01517" "" "MCOATAm" "" "" "" "MCOATAm" "MNXR101421" "" "" "" 0 "" "" "MCOATAm"
"MAR01518" "" "MEPIVESSte" "" "" "" "MEPIVESSte" "MNXR101465" "" "" "" 0 "" "" "MEPIVESSte"
"MAR01520" "" "MEVK1x" "" "" "" "MEVK1x" "MNXR101495" "" "" "" 0 "RHEA:17066" "RHEA:17065" "MEVK1x"
@@ -8519,7 +8438,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01612" "" "PGPP_hs" "" "" "" "PGPP_hs" "MNXR102585" "" "" "" 0 "" "" "PGPP_hs"
"MAR01615" "" "PGPPT" "" "" "" "PGPPT" "MNXR102578" "" "" "" 0 "" "" "PGPPT"
"MAR01616" "" "PHETA1m" "" "" "" "PHETA1m" "MNXR102631" "" "" "" 0 "" "" "PHETA1m"
-"MAR01617" "" "PHYTt" "" "" "" "PHYTt" "MNXR102660" "" "" "" 0 "" "" "PHYTt"
"MAR01618" "" "PI4P3Ker" "" "" "" "PI4P3Ker" "MNXR102746" "" "" "" 0 "" "" "PI4P3Ker"
"MAR01621" "" "PIter" "" "" "" "PIter" "MNXR102871" "" "" "" 0 "RHEA:32826" "RHEA:32823" "PIter"
"MAR01626" "" "PItx" "" "" "" "PItx" "MNXR102871" "" "" "" 0 "RHEA:32826" "RHEA:32823" "PItx"
@@ -8554,7 +8472,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01698" "" "RETFAt" "" "" "" "RETFAt" "MNXR103996" "" "" "" 0 "" "" "RETFAt"
"MAR01705" "" "RETFAt1" "" "" "" "RETFAt1" "MNXR103997" "" "" "" 0 "" "" "RETFAt1"
"MAR01707" "" "RIBt2" "" "" "" "RIBt2" "MNXR104037" "" "" "" 0 "" "" "RIBt2"
-"MAR01709" "" "SCP22x" "" "" "" "SCP22x" "MNXR104294" "" "" "" 0 "" "" "SCP22x"
"MAR01711" "" "SCP2x" "" "" "" "SCP2x" "MNXR104295" "" "" "" 0 "" "" "SCP2x"
"MAR01712" "" "Ser_Thrtg" "" "" "" "Ser_Thrtg" "MNXR104656" "" "" "" 0 "" "" "Ser_Thrtg"
"MAR01713" "" "SIAASE" "" "" "" "SIAASE" "MNXR104385" "" "" "" 0 "" "" "SIAASE"
@@ -8592,7 +8509,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01820" "" "UGT1A10r" "" "" "" "UGT1A10r" "MNXR96258" "" "" "" 0 "" "" "UGT1A10r"
"MAR01821" "" "VALt5m" "" "" "" "VALt5m" "MNXR105190" "" "" "" 0 "" "" "VALt5m"
"MAR01822" "" "VITD3tm" "" "" "" "VITD3tm" "MNXR105203" "" "" "" 0 "" "" "VITD3tm"
-"MAR01823" "" "VITD3tm3" "" "" "" "VITD3tm3" "MNXR105203" "" "" "" 0 "" "" "VITD3tm3"
"MAR01824" "" "XOL27OHtm" "" "" "" "XOL27OHtm" "MNXR105232" "" "" "" 0 "" "" "XOL27OHtm"
"MAR01825" "" "XOL7AH2tr" "" "" "" "XOL7AH2tr" "MNXR105233" "" "" "" 0 "" "" "XOL7AH2tr"
"MAR01826" "" "XOLDIOLONEtm" "" "" "" "XOLDIOLONEtm" "MNXR105235" "" "" "" 0 "" "" "XOLDIOLONEtm"
@@ -8628,13 +8544,10 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR01975" "" "EX_HC02161_e" "" "" "" "EX_HC02161[e]" "MNXR98151" "" "" "" 0 "" "" "EX_HC02161[e]"
"MAR01984" "" "EX_prpp_e" "" "" "" "EX_prpp[e]" "MNXR98875" "" "" "" 0 "" "" "EX_prpp[e]"
"MAR01986" "" "EX_udpg_e" "" "" "" "EX_udpg[e]" "MNXR99017" "" "" "" 0 "" "" "EX_udpg[e]"
-"MAR02006" "" "CPS_m" "" "" "" "r0034" "" "" "" "" 0 "" "" "r0034"
"MAR02021" "" "r0093" "" "" "" "r0093" "MNXR105070" "" "" "" 0 "" "" "r0093"
"MAR02023" "" "r0145" "" "" "" "r0145" "" "" "" "" 0 "" "" "r0145"
"MAR02026" "" "r0170" "" "" "" "r0170" "" "" "" "" 0 "" "" "r0170"
-"MAR02027" "" "r0193" "" "" "" "r0193" "MNXR105313" "" "" "" 0 "" "" "r0193"
"MAR02028" "" "ACOAR7m" "" "" "" "r0309" "MNXR95375" "" "" "" 0 "" "" "r0309"
-"MAR02035" "" "r0310" "" "" "" "r0310" "" "" "" "" 0 "" "" "r0310"
"MAR02119" "" "r0403" "" "" "" "r0403" "" "" "" "" 0 "" "" "r0403"
"MAR02120" "" "r0410" "" "" "" "r0410" "MNXR102049" "" "" "" 0 "RHEA:28365" "RHEA:28362" "r0410"
"MAR02121" "" "r0437" "" "" "" "r0437" "MNXR96384" "" "" "" 0 "" "" "r0437"
@@ -8650,7 +8563,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR02149" "" "ACOAR5m" "" "" "" "r0638" "MNXR95373" "" "" "" 0 "" "" "r0638"
"MAR02183" "" "r0652" "" "" "" "r0652" "MNXR105364" "" "" "" 0 "" "" "r0652"
"MAR02184" "" "r0672" "" "" "" "r0672" "MNXR105366" "" "" "" 0 "" "" "r0672"
-"MAR02185" "" "" "" "" "" "r0701" "" "" "" "" 0 "" "" "r0701"
"MAR02186" "" "r0707" "" "" "" "r0707" "MNXR95665" "" "" "" 0 "" "" "r0707"
"MAR02187" "" "ACOAR4m" "" "" "" "r0735" "MNXR95372" "" "" "" 0 "RHEA:44963" "RHEA:44960" "r0735"
"MAR02188" "" "r0752" "" "" "" "r0752" "MNXR94840" "" "" "" 0 "" "" "r0752"
@@ -8676,8 +8588,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR02273" "" "r0986" "" "" "" "r0986" "MNXR101107" "" "" "" 0 "" "" "r0986"
"MAR02274" "" "r0988" "" "" "" "r0988" "MNXR101014" "" "" "" 0 "" "" "r0988"
"MAR02275" "" "r0989" "" "" "" "r0989" "MNXR105412" "" "" "" 0 "" "" "r0989"
-"MAR02276" "" "r0993" "" "" "" "r0993" "MNXR105414" "" "" "" 0 "" "" "r0993"
-"MAR02277" "" "r0994" "" "" "" "r0994" "MNXR105415" "" "" "" 0 "" "" "r0994"
"MAR02278" "" "r0999" "" "" "" "r0999" "MNXR105417" "" "" "" 0 "" "" "r0999"
"MAR02279" "" "r1003" "" "" "" "r1003" "MNXR105419" "" "" "" 0 "" "" "r1003"
"MAR02280" "" "r1008" "" "" "" "r1008" "MNXR105421" "" "" "" 0 "" "" "r1008"
@@ -8718,31 +8628,20 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR02351" "" "PIt" "" "" "" "r1423" "MNXR102871" "" "" "" 0 "RHEA:32824" "RHEA:32823" "r1423"
"MAR02352" "" "" "" "" "" "r1431" "" "" "" "" 0 "" "" "r1431"
"MAR02357" "" "" "" "" "" "r1432" "" "" "" "" 0 "" "" "r1432"
-"MAR02358" "" "" "" "" "" "r1433" "" "" "" "" 0 "" "" "r1433"
"MAR02360" "" "r1441" "" "" "" "r1441" "MNXR104924" "" "" "" 0 "" "" "r1441"
-"MAR02366" "" "r1446" "" "" "" "r1446" "" "" "" "" 0 "" "" "r1446"
-"MAR02367" "" "r1447" "" "" "" "r1447" "" "" "" "" 0 "" "" "r1447"
-"MAR02369" "" "r1448" "" "" "" "r1448" "" "" "" "" 0 "" "" "r1448"
-"MAR02370" "" "r1449" "" "" "" "r1449" "" "" "" "" 0 "" "" "r1449"
-"MAR02372" "" "r1450" "" "" "" "r1450" "" "" "" "" 0 "" "" "r1450"
-"MAR02373" "" "r1451" "" "" "" "r1451" "" "" "" "" 0 "" "" "r1451"
"MAR02375" "" "r1466" "" "" "" "r1466" "MNXR105476" "" "" "" 0 "" "" "r1466"
"MAR02377" "" "r1467" "" "" "" "r1467" "MNXR102156" "" "" "" 0 "" "" "r1467"
"MAR02379" "" "r1468" "" "" "" "r1468" "MNXR105477" "" "" "" 0 "" "" "r1468"
"MAR02381" "" "r1481" "" "" "" "r1481" "" "" "" "" 0 "" "" "r1481"
"MAR02382" "" "GTHRDt2" "" "" "" "r1493" "MNXR100449" "" "" "" 0 "" "" "r1493"
-"MAR02384" "" "r1495" "" "" "" "r1495" "MNXR105478" "" "" "" 0 "" "" "r1495"
"MAR02385" "" "r1526" "" "" "" "r1526" "MNXR105497" "" "" "" 0 "" "" "r1526"
"MAR02386" "" "r1527" "" "" "" "r1527" "MNXR105498" "" "" "" 0 "" "" "r1527"
"MAR02388" "" "r1540" "" "" "" "r1540" "" "" "" "" 0 "" "" "r1540"
-"MAR02390" "" "r2157" "" "" "" "r2157" "MNXR106054" "" "" "" 0 "" "" "r2157"
-"MAR02392" "" "r2158" "" "" "" "r2158" "MNXR106055" "" "" "" 0 "" "" "r2158"
-"MAR02394" "" "r2159" "" "" "" "r2159" "MNXR106056" "" "" "" 0 "" "" "r2159"
-"MAR02396" "" "r2236" "" "" "" "r2236" "MNXR106133" "" "" "" 0 "" "" "r2236"
-"MAR02398" "" "r2237" "" "" "" "r2237" "MNXR106134" "" "" "" 0 "" "" "r2237"
-"MAR02400" "" "r2238" "" "" "" "r2238" "MNXR106135" "" "" "" 0 "" "" "r2238"
-"MAR02402" "" "r2315" "" "" "" "r2315" "MNXR106212" "" "" "" 0 "" "" "r2315"
-"MAR02404" "" "r2346" "" "" "" "r2346" "MNXR106235" "" "" "" 0 "" "" "r2346"
+"MAR02396" "" "r2236" "" "r2236" "" "r2236" "MNXR106133" "HMR_6142" "RCR40595" "2.A.60.1.5" 0 "" "" "HMR_6142;r2236;MAR06142"
+"MAR02398" "" "r2237" "" "r2237" "" "r2237" "MNXR106134" "HMR_6143" "RCR40596" "2.A.60.1.5" 0 "" "" "HMR_6143;r2237;MAR06143"
+"MAR02400" "" "r2238" "" "r2238" "" "r2238" "MNXR106135" "HMR_6144" "RCR40597" "2.A.60.1.5" 0 "" "" "HMR_6144;r2238;MAR06144"
+"MAR02402" "" "r2315" "" "r2315" "" "r2315" "MNXR106212" "HMR_6220" "RCR40672" "2.A.60.1.2" 0 "" "" "HMR_6220;r2315;MAR06220"
+"MAR02404" "" "r2346" "" "r2346" "" "r2346" "MNXR106235" "HMR_6252" "RCR40129" "" 0 "" "" "HMR_6252;r2346;MAR06252"
"MAR02405" "" "AKGCITtm" "" "" "" "r2373" "MNXR95654" "" "" "" 0 "" "" "r2373"
"MAR02406" "" "r2374" "" "" "" "r2374" "MNXR106255" "" "" "" 0 "" "" "r2374"
"MAR02413" "" "r2375" "" "" "" "r2375" "MNXR106256" "" "" "" 0 "" "" "r2375"
@@ -8819,7 +8718,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR02751" "" "RE1134M" "" "" "" "RE1134M" "MNXR102255" "" "" "" 0 "" "" "RE1134M"
"MAR02756" "" "" "" "" "" "RE1135G" "" "" "" "" 0 "" "" "RE1135G"
"MAR02763" "" "" "" "" "" "RE1135L" "" "" "" "" 0 "" "" "RE1135L"
-"MAR02765" "" "" "" "" "" "RE1233M" "" "" "" "" 0 "" "" "RE1233M"
+"MAR02765" "" "" "" "" "" "RE1233M" "" "" "" "" 0 "RHEA:65561" "RHEA:65560" "RE1233M"
"MAR02767" "" "RE1309M" "" "" "" "RE1309M" "MNXR103507" "" "" "" 0 "" "" "RE1309M"
"MAR02779" "" "RE1342C" "" "" "" "RE1342C" "MNXR103511" "" "" "" 0 "" "" "RE1342C"
"MAR02781" "" "RE1447M" "" "" "" "RE1447M" "MNXR102717" "" "" "" 0 "" "" "RE1447M"
@@ -8827,10 +8726,10 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR02784" "" "RE1448N" "" "" "" "RE1448N" "MNXR103512" "" "" "" 0 "" "" "RE1448N"
"MAR02786" "" "" "" "" "" "RE1514M" "" "" "" "" 0 "" "" "RE1514M"
"MAR02802" "" "" "" "" "" "RE1514X" "" "" "" "" 0 "" "" "RE1514X"
-"MAR02804" "" "RE1516X" "" "" "" "RE1516X" "" "" "" "" 0 "" "" "RE1516X"
-"MAR02808" "" "RE1517X" "" "" "" "RE1517X" "" "" "" "" 0 "" "" "RE1517X"
-"MAR02810" "" "RE1518X" "" "" "" "RE1518X" "" "" "" "" 0 "" "" "RE1518X"
-"MAR02818" "" "RE1519X" "" "" "" "RE1519X" "" "" "" "" 0 "" "" "RE1519X"
+"MAR02804" "" "RE1516X" "RE1516X" "" "" "RE1516X" "" "HMR_3301" "RCR12606" "" 0 "" "" "RE1516X;HMR_3301"
+"MAR02808" "" "RE1517X" "RE1517X" "" "" "RE1517X" "" "HMR_3306" "RCR12610" "" 0 "" "" "RE1517X;HMR_3306;MAR00306"
+"MAR02810" "" "RE1518X" "RE1518X" "" "" "RE1518X" "" "HMR_3311" "RCR14519" "" 0 "" "" "RE1518X;HMR_3311;MAR03311"
+"MAR02818" "" "RE1519X;FAOXC101C102x" "" "" "" "RE1519X;FAOXC101C102x" "" "" "" "" 0 "" "" "RE1519X;FAOXC101C102x;MAR04966"
"MAR02820" "" "RE1525C" "" "" "" "RE1525C" "MNXR103515" "" "" "" 0 "" "" "RE1525C"
"MAR02826" "" "RE1526C" "" "" "" "RE1526C" "MNXR103516" "" "" "" 0 "" "" "RE1526C"
"MAR02828" "" "RE1527C" "" "" "" "RE1527C" "MNXR103517" "" "" "" 0 "" "" "RE1527C"
@@ -8933,8 +8832,8 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR03271" "" "" "" "" "" "RE2911C" "" "" "" "" 0 "" "" "RE2911C"
"MAR03273" "" "RE2912M" "" "" "" "RE2912M" "" "" "" "" 0 "" "" "RE2912M"
"MAR03274" "" "" "" "" "" "RE2912X" "" "" "" "" 0 "" "" "RE2912X"
-"MAR03276" "" "" "" "" "" "RE2913X" "" "" "" "" 0 "" "" "RE2913X"
-"MAR03289" "" "" "" "" "" "RE2914X" "" "" "" "" 0 "" "" "RE2914X"
+"MAR03276" "" "" "RE2913X" "" "" "RE2913X" "" "HMR_3364" "RCR12576" "" 0 "" "" "RE2913X;HMR_3364;MAR03364"
+"MAR03289" "" "" "RE2914X" "" "" "RE2914X" "" "HMR_3369" "RCR12580" "" 0 "" "" "RE2914X;HMR_3369;MAR03369"
"MAR03291" "" "" "" "" "" "RE2915M" "" "" "" "" 0 "" "" "RE2915M"
"MAR03295" "" "" "" "" "" "RE2915X" "" "" "" "" 0 "" "" "RE2915X"
"MAR03297" "" "" "" "" "" "RE2921M" "" "" "" "" 0 "" "" "RE2921M"
@@ -8991,7 +8890,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR03438" "" "" "" "" "" "RE3147R" "" "" "" "" 0 "" "" "RE3147R"
"MAR03439" "" "" "" "" "" "RE3148C" "" "" "" "" 0 "" "" "RE3148C"
"MAR03440" "" "" "" "" "" "RE3148R" "" "" "" "" 0 "" "" "RE3148R"
-"MAR03441" "" "RE3150C" "" "" "" "RE3150C" "MNXR103806" "" "" "" 0 "" "" "RE3150C"
"MAR03442" "" "RE3150R" "" "" "" "RE3150R" "MNXR103806" "" "" "" 0 "" "" "RE3150R"
"MAR03443" "" "" "" "" "" "RE3151R" "" "" "" "" 0 "" "" "RE3151R"
"MAR03451" "" "" "" "" "" "RE3152R" "" "" "" "" 0 "" "" "RE3152R"
@@ -9044,11 +8942,9 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR03624" "" "RE3243R" "" "" "" "RE3243R" "MNXR103848" "" "" "" 0 "" "" "RE3243R"
"MAR03745" "" "RE3244C" "" "" "" "RE3244C" "MNXR103849" "" "" "" 0 "" "" "RE3244C"
"MAR03749" "" "RE3244R" "" "" "" "RE3244R" "MNXR103849" "" "" "" 0 "" "" "RE3244R"
-"MAR03754" "" "" "" "" "" "RE3248M" "" "" "" "" 0 "" "" "RE3248M"
-"MAR03756" "" "" "" "" "" "RE3248X" "" "" "" "" 0 "" "" "RE3248X"
+"MAR03756" "" "" "" "" "" "RE3248X;RE3248M" "" "" "" "" 0 "" "" "RE3248X;RE3248M;MAR03754"
"MAR03758" "" "RE3250C" "" "" "" "RE3250C" "MNXR103850" "" "" "" 0 "" "" "RE3250C"
-"MAR03760" "" "" "" "" "" "RE3250M" "" "" "" "" 0 "" "" "RE3250M"
-"MAR03764" "" "" "" "" "" "RE3250X" "" "" "" "" 0 "" "" "RE3250X"
+"MAR03764" "" "" "" "" "" "RE3250X;RE3250M" "" "" "" "" 0 "" "" "RE3250X;RE3250M;MAR03760"
"MAR03766" "" "RE3251C" "" "" "" "RE3251C" "MNXR103851" "" "" "" 0 "" "" "RE3251C"
"MAR03768" "" "RE3251M" "" "" "" "RE3251M" "MNXR103851" "" "" "" 0 "" "" "RE3251M"
"MAR03774" "" "RE3252C" "" "" "" "RE3252C" "MNXR103852" "" "" "" 0 "" "" "RE3252C"
@@ -9162,7 +9058,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04092" "" "EX_prostgh2_e" "" "" "" "EX_prostgh2[e]" "MNXR98873" "" "" "" 0 "" "" "EX_prostgh2[e]"
"MAR04094" "" "EX_prostgi2_e" "" "" "" "EX_prostgi2[e]" "MNXR98874" "" "" "" 0 "" "" "EX_prostgi2[e]"
"MAR04096" "" "EX_cdp_e" "" "" "" "EX_cdp[e]" "MNXR98331" "" "" "" 0 "" "" "EX_cdp[e]"
-"MAR04098" "" "EX_dtdp_e" "" "" "" "EX_dtdp[e]" "MNXR98432" "" "" "" 0 "" "" "EX_dtdp[e]"
+"MAR04098" "" "EX_dtdp_e" "" "" "" "EX_dtdp[e]" "MNXR98432" "" "" "" 0 "" "" "EX_dtdp[e];MAR07785"
"MAR04100" "" "EX_HC00955_e" "" "" "" "EX_HC00955[e]" "MNXR98138" "" "" "" 0 "" "" "EX_HC00955[e]"
"MAR04102" "" "" "" "" "" "EX_HC00002[e]" "" "" "" "" 0 "" "" "EX_HC00002[e]"
"MAR04104" "" "" "" "" "" "EX_HC00003[e]" "" "" "" "" 0 "" "" "EX_HC00003[e]"
@@ -9173,7 +9069,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04138" "" "" "" "" "" "EX_HC01943[e]" "" "" "" "" 0 "" "" "EX_HC01943[e]"
"MAR04140" "" "" "" "" "" "EX_HC01944[e]" "" "" "" "" 0 "" "" "EX_HC01944[e]"
"MAR04142" "" "EX_HC00822_e" "" "" "" "EX_HC00822[e]" "MNXR98137" "" "" "" 0 "" "" "EX_HC00822[e]"
-"MAR04144" "" "EX_C02528_e" "" "" "" "EX_C02528[e]" "MNXR98101" "" "" "" 0 "" "" "EX_C02528[e]"
"MAR04146" "" "EX_HC02192_e" "" "" "" "EX_HC02192[e]" "MNXR98156" "" "" "" 0 "" "" "EX_HC02192[e]"
"MAR04148" "" "EX_HC02193_e" "" "" "" "EX_HC02193[e]" "MNXR98157" "" "" "" 0 "" "" "EX_HC02193[e]"
"MAR04150" "" "EX_HC02195_e" "" "" "" "EX_HC02195[e]" "MNXR98159" "" "" "" 0 "" "" "EX_HC02195[e]"
@@ -9245,7 +9140,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04405" "" "EX_CE5853_e" "" "" "" "EX_CE5853[e]" "MNXR98128" "" "" "" 0 "" "" "EX_CE5853[e]"
"MAR04407" "" "EX_CE1925_e" "" "" "" "EX_CE1925[e]" "MNXR98104" "" "" "" 0 "" "" "EX_CE1925[e]"
"MAR04409" "" "EX_C04849_e" "" "" "" "EX_C04849[e]" "MNXR98102" "" "" "" 0 "" "" "EX_C04849[e]"
-"MAR04411" "" "PIt8" "" "" "" "PIt8" "MNXR102875" "HMR_4911" "RCR40976" "" 0 "" "" "PIt8"
"MAR04413" "" "" "" "" "" "" "" "" "" "" 0 "" "" "biomass_Recon3D"
"MAR04438" "" "2MB2COAc" "" "" "" "2MB2COAc" "MNXR94807" "" "" "" 0 "" "" "2MB2COAc"
"MAR04439" "" "3HBCOARc" "" "" "" "3HBCOARc" "MNXR94892" "" "" "" 0 "" "" "3HBCOARc"
@@ -9259,7 +9153,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04479" "" "C10DCCACT" "" "" "" "C10DCCACT" "MNXR96374" "" "" "" 0 "" "" "C10DCCACT"
"MAR04491" "" "C10DCc" "" "" "" "C10DCc" "MNXR96375" "" "" "" 0 "" "" "C10DCc"
"MAR04504" "" "C10OHc" "" "" "" "C10OHc" "MNXR96376" "" "" "" 0 "" "" "C10OHc"
-"MAR04506" "" "C120CPT1" "" "" "" "C120CPT1" "" "" "" "" 0 "" "" "C120CPT1"
"MAR04508" "" "C121CPT1" "" "" "" "C121CPT1" "" "" "" "" 0 "" "" "C121CPT1"
"MAR04509" "" "C12DCACOT" "" "" "" "C12DCACOT" "" "" "" "" 0 "" "" "C12DCACOT"
"MAR04511" "" "C12DCACT" "" "" "" "C12DCACT" "" "" "" "" 0 "" "" "C12DCACT"
@@ -9341,7 +9234,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04943" "" "EX_ivcrn_e" "" "" "" "EX_ivcrn[e]" "MNXR98685" "" "" "" 0 "" "" "EX_ivcrn[e]"
"MAR04950" "" "EX_tetdec2crn_e" "" "" "" "EX_tetdec2crn[e]" "" "" "" "" 0 "" "" "EX_tetdec2crn[e]"
"MAR04965" "" "EX_tetdece1crn_e" "" "" "" "EX_tetdece1crn[e]" "" "" "" "" 0 "" "" "EX_tetdece1crn[e]"
-"MAR04966" "" "FAOXC101C102x" "" "" "" "FAOXC101C102x" "" "" "" "" 0 "" "" "FAOXC101C102x"
"MAR04967" "" "FAOXC101C8m" "" "" "" "FAOXC101C8m" "" "" "" "" 0 "" "" "FAOXC101C8m"
"MAR04968" "" "FAOXC101C8x" "" "" "" "FAOXC101C8x" "" "" "" "" 0 "" "" "FAOXC101C8x"
"MAR04970" "" "FAOXC102C101m" "" "" "" "FAOXC102C101m" "" "" "" "" 0 "" "" "FAOXC102C101m"
@@ -9417,7 +9309,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR05309" "" "FAOXC164x" "" "" "" "FAOXC164x" "" "" "" "" 0 "" "" "FAOXC164x"
"MAR05312" "" "FAOXC165C164m" "" "" "" "FAOXC165C164m" "" "" "" "" 0 "" "" "FAOXC165C164m"
"MAR05321" "" "FAOXC165C164x" "" "" "" "FAOXC165C164x" "" "" "" "" 0 "" "" "FAOXC165C164x"
-"MAR05323" "" "FAOXC16Brx" "" "" "" "FAOXC16BRx" "MNXR99186" "" "" "" 0 "" "" "FAOXC16BRx"
"MAR05325" "" "FAOXC160140m" "" "" "" "FAOXC16C14m" "MNXR99295" "" "" "" 0 "" "" "FAOXC16C14m"
"MAR05327" "" "FAOXC160140x" "" "" "" "FAOXC16C14x" "MNXR99296" "" "" "" 0 "" "" "FAOXC16C14x"
"MAR05329" "" "FAOXC16C16OHm" "" "" "" "FAOXC16C16OHm" "" "" "" "" 0 "" "" "FAOXC16C16OHm"
@@ -9464,12 +9355,11 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR05427" "" "FAOXC22OHC22r" "" "" "" "FAOXC22OHC22r" "" "" "" "" 0 "" "" "FAOXC22OHC22r"
"MAR05428" "" "FAOXC241C221x" "" "" "" "FAOXC241C221x" "" "" "" "" 0 "" "" "FAOXC241C221x"
"MAR05431" "" "FAOXC24C22x" "" "" "" "FAOXC24C22x" "" "" "" "" 0 "" "" "FAOXC24C22x"
-"MAR05434" "" "FAOXC3DC" "" "" "" "FAOXC3DC" "" "" "" "" 0 "" "" "FAOXC3DC"
"MAR05449" "" "FAOXC4020m" "" "" "" "FAOXC4C2m" "MNXR99368" "" "" "" 0 "" "" "FAOXC4C2m"
"MAR05456" "" "FAOXC4C4DCc" "" "" "" "FAOXC4C4DCc" "" "" "" "" 0 "" "" "FAOXC4C4DCc"
"MAR05988" "" "FAOXC5C3x" "" "" "" "FAOXC5C3x" "" "" "" "" 0 "" "" "FAOXC5C3x"
"MAR05991" "" "FAOXC5C5DCc" "" "" "" "FAOXC5C5DCc" "" "" "" "" 0 "" "" "FAOXC5C5DCc"
-"MAR05999" "" "FAOXC5C5OHm" "" "" "" "FAOXC5C5OHm" "" "" "" "" 0 "" "" "FAOXC5C5OHm"
+"MAR05999" "" "FAOXC5C5OHm" "" "" "" "FAOXC5C5OHm" "" "" "" "" 0 "RHEA:31081" "RHEA:31079" "FAOXC5C5OHm"
"MAR06278" "" "FAOXC5OHc" "" "" "" "FAOXC5OHc" "" "" "" "" 0 "" "" "FAOXC5OHc"
"MAR06279" "" "FAOXC61C4m" "" "" "" "FAOXC61C4m" "" "" "" "" 0 "" "" "FAOXC61C4m"
"MAR06280" "" "FAOXC61C4x" "" "" "" "FAOXC61C4x" "" "" "" "" 0 "" "" "FAOXC61C4x"
@@ -9560,9 +9450,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR06891" "" "CYSTALArBATtc" "" "" "" "CYSTALArBATtc" "MNXR97011" "" "" "" 0 "" "" "CYSTALArBATtc"
"MAR06892" "" "CYSTLEUrBATtc" "" "" "" "CYSTLEUrBATtc" "MNXR97016" "" "" "" 0 "" "" "CYSTLEUrBATtc"
"MAR06893" "" "FOLt" "" "" "" "FOLTle" "MNXR99612" "" "" "" 0 "" "" "FOLTle"
-"MAR06894" "" "GALSGLT1le" "" "" "" "GALSGLT1le" "MNXR100011" "" "" "" 0 "" "" "GALSGLT1le"
-"MAR06895" "" "GLCSGLT1le" "" "" "" "GLCSGLT1le" "MNXR100225" "" "" "" 0 "" "" "GLCSGLT1le"
-"MAR06896" "" "GLNATB0tc" "" "" "" "GLNATB0tc" "MNXR100248" "" "" "" 0 "" "" "GLNATB0tc"
+"MAR06896" "" "GLNATB0tc;GLNB0AT3tc" "" "" "" "GLNATB0tc;GLNB0AT3tc" "MNXR100248" "" "" "" 0 "" "" "GLNATB0tc;GLNB0AT3tc;MAR09887"
"MAR06897" "" "GLNyLATthc" "" "" "" "GLNyLATthc" "MNXR100264" "" "" "" 0 "" "" "GLNyLATthc"
"MAR06898" "" "GLYGLYCNc" "" "" "" "GLYGLYCNc" "MNXR100345" "" "" "" 0 "" "" "GLYGLYCNc"
"MAR06899" "" "GLYGLYPEPT1tc" "" "" "" "GLYGLYPEPT1tc" "MNXR100346" "" "" "" 0 "" "" "GLYGLYPEPT1tc"
@@ -9798,7 +9686,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR09884" "" "FOLOAT2tc" "" "" "" "FOLOAT2tc" "" "" "" "" 0 "" "" "FOLOAT2tc"
"MAR09885" "" "FOLOATPtc" "" "" "" "FOLOATPtc" "" "" "" "" 0 "" "" "FOLOATPtc"
"MAR09886" "" "GABABGTtc" "" "" "" "GABABGTtc" "" "" "" "" 0 "" "" "GABABGTtc"
-"MAR09887" "" "GLNB0AT3tc" "" "" "" "GLNB0AT3tc" "" "" "" "" 0 "" "" "GLNB0AT3tc"
"MAR09888" "" "GLUB0AT3tc" "" "" "" "GLUB0AT3tc" "" "" "" "" 0 "" "" "GLUB0AT3tc"
"MAR09889" "" "GSNt2" "" "" "" "GSNt2r" "MNXR100434" "" "" "" 0 "RHEA:29586" "RHEA:29583" "GSNt2r"
"MAR09890" "" "H2OGLYAQPt" "" "" "" "H2OGLYAQPt" "" "" "" "" 0 "" "" "H2OGLYAQPt"
@@ -9966,7 +9853,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR10161" "" "CE2028t" "" "" "" "CE2028t" "" "" "" "" 0 "" "" "CE2028t"
"MAR10162" "" "CE2176t" "" "" "" "CE2176t" "" "" "" "" 0 "" "" "CE2176t"
"MAR10163" "" "CE2445t" "" "" "" "CE2445t" "" "" "" "" 0 "" "" "CE2445t"
-"MAR10164" "" "" "" "" "" "CE2516t" "" "" "" "" 0 "" "" "CE2516t"
"MAR10165" "" "CE2537ATP" "" "" "" "CE2537ATP" "" "" "" "" 0 "" "" "CE2537ATP"
"MAR10166" "" "CE4843t" "" "" "" "CE4843t" "" "" "" "" 0 "" "" "CE4843t"
"MAR10167" "" "CE4843td" "" "" "" "CE4843td" "" "" "" "" 0 "" "" "CE4843td"
@@ -10150,7 +10036,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR10345" "" "EX_ttdcrn_e" "" "" "" "EX_ttdcrn[e]" "MNXR98998" "" "" "" 0 "" "" "EX_ttdcrn[e]"
"MAR10346" "" "EX_txb2_e;EX_HC02180_e" "" "" "" "EX_txb2[e];EX_HC02180[e]" "MNXR106236" "" "" "" 0 "" "" "EX_txb2[e]"
"MAR10347" "" "EX_urcan_e" "" "" "" "EX_urcan[e]" "" "" "" "" 0 "" "" "EX_urcan[e]"
-"MAR10348" "" "EX_wharachd_e" "" "" "" "EX_wharachd[e]" "MNXR99036" "" "" "" 0 "" "" "EX_wharachd[e]"
+"MAR10348" "" "EX_wharachd_e" "" "" "" "EX_wharachd[e]" "MNXR99036" "" "" "" 0 "" "" "EX_wharachd[e];HMR_10025;MAR10025"
"MAR10349" "" "EX_xolest181_hs_e" "" "" "" "EX_xolest181_hs[e]" "" "" "" "" 0 "" "" "EX_xolest181_hs[e]"
"MAR10350" "" "EX_xolest182_hs_e" "" "" "" "EX_xolest182_hs[e]" "" "" "" "" 0 "" "" "EX_xolest182_hs[e]"
"MAR10351" "" "EX_xolest183_hs_e" "" "" "" "EX_xolest183_hs[e]" "" "" "" "" 0 "" "" "EX_xolest183_hs[e]"
@@ -10234,7 +10120,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR10430" "" "EX_acglu_e" "" "" "" "EX_acglu[e]" "" "" "" "" 0 "" "" "EX_acglu[e]"
"MAR10431" "" "EX_alltn_e" "" "" "" "EX_alltn[e]" "MNXR98261" "" "" "" 0 "" "" "EX_alltn[e]"
"MAR10432" "" "EX_CE2510_e" "" "" "" "EX_CE2510[e]" "" "" "" "" 0 "" "" "EX_CE2510[e]"
-"MAR10433" "" "" "" "" "" "EX_CE2516[e]" "" "" "" "" 0 "" "" "EX_CE2516[e]"
"MAR10434" "" "EX_ddca_e" "" "" "" "EX_ddca[e]" "MNXR98403" "" "" "" 0 "" "" "EX_ddca[e]"
"MAR10435" "" "EX_glyc2p_e" "" "" "" "EX_glyc2p[e]" "MNXR98598" "" "" "" 0 "" "" "EX_glyc2p[e]"
"MAR10436" "" "EX_glyclt_e" "" "" "" "EX_glyclt[e]" "MNXR98603" "" "" "" 0 "" "" "EX_glyclt[e]"
@@ -10248,7 +10133,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR10444" "" "ACHOMm" "" "" "" "ACHOMm" "" "" "" "" 0 "" "" "ACHOMm"
"MAR10445" "" "HC02195c" "" "" "" "HC02195c" "" "" "" "" 0 "" "" "HC02195c"
"MAR10446" "" "HC02196c" "" "" "" "HC02196c" "" "" "" "" 0 "" "" "HC02196c"
-"MAR10447" "" "HC02220c" "" "" "" "HC02220c" "" "" "" "" 0 "" "" "HC02220c"
"MAR10448" "" "7KLITCHOLc" "" "" "" "7KLITCHOLc" "" "" "" "" 0 "" "" "7KLITCHOLc"
"MAR10449" "" "HC02194c" "" "" "" "HC02194c" "" "" "" "" 0 "" "" "HC02194c"
"MAR10450" "" "URSCHOLCOAc" "" "" "" "URSCHOLCOAc" "" "" "" "" 0 "" "" "URSCHOLCOAc"
@@ -10267,12 +10151,9 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR10463" "" "" "" "" "" "INDOLEup" "" "" "" "" 0 "" "" "INDOLEup"
"MAR10464" "" "" "" "" "" "INDSt" "" "" "" "" 0 "" "" "INDSt"
"MAR10465" "" "PCRESOLup" "" "" "" "PCRESOLup" "" "" "" "" 0 "" "" "PCRESOLup"
-"MAR10466" "" "PCSsec" "" "" "" "PCSsec" "" "" "" "" 0 "" "" "PCSsec"
-"MAR10467" "" "" "" "" "" "PCSup" "" "" "" "" 0 "" "" "PCSup"
-"MAR10468" "" "" "" "" "" "3HCINNMup" "" "" "" "" 0 "" "" "3HCINNMup"
-"MAR10469" "" "" "" "" "" "3HCINNMsec" "" "" "" "" 0 "" "" "3HCINNMsec"
-"MAR10470" "" "" "" "" "" "3HPPAup" "" "" "" "" 0 "" "" "3HPPAup"
-"MAR10471" "" "" "" "" "" "3HPPAsec" "" "" "" "" 0 "" "" "3HPPAsec"
+"MAR10466" "" "PCSsec" "" "" "" "PCSsec;PCSup" "" "" "" "" 0 "" "" "PCSsec;PCSup"
+"MAR10468" "" "" "" "" "" "3HCINNMup;3HCINNMsec" "" "" "" "" 0 "" "" "3HCINNMup;3HCINNMsec"
+"MAR10470" "" "" "" "" "" "3HPPAup;3HPPAsec" "" "" "" "" 0 "" "" "3HPPAup;3HPPAsec"
"MAR10472" "" "" "" "" "" "EX_3hcinnm[e]" "" "" "" "" 0 "" "" "EX_3hcinnm[e]"
"MAR10473" "" "" "" "" "" "EX_3hppa[e]" "" "" "" "" 0 "" "" "EX_3hppa[e]"
"MAR10474" "" "EX_bgly_e" "" "" "" "EX_bgly[e]" "" "" "" "" 0 "" "" "EX_bgly[e]"
@@ -11218,7 +11099,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR11418" "" "URIt2" "" "" "" "URIt2r" "MNXR105166" "" "" "" 0 "RHEA:29954" "RHEA:29951" "URIt2r"
"MAR11419" "" "EX_ind3ac_e" "" "" "" "EX_ind3ac[e]" "MNXR98679" "" "" "" 0 "" "" "EX_ind3ac[e]"
"MAR11420" "" "EX_nh4_e" "" "" "" "EX_nh4[e]" "MNXR98786" "" "" "" 0 "" "" "EX_nh4[e]"
-"MAR11421" "" "CITL" "" "" "" "CITL" "MNXR96731" "" "" "" 0 "RHEA:10761" "RHEA:10760" "CITL"
"MAR11422" "" "EX_galt_e" "" "" "" "EX_galt[e]" "MNXR98554" "" "" "" 0 "" "" "EX_galt[e]"
"MAR11423" "" "EX_glcr_e" "" "" "" "EX_glcr[e]" "MNXR98575" "" "" "" 0 "" "" "EX_glcr[e]"
"MAR11424" "" "EX_glcur_e" "" "" "" "EX_glcur[e]" "MNXR98577" "" "" "" 0 "" "" "EX_glcur[e]"
@@ -11311,7 +11191,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR11511" "" "TIGGLYte" "" "" "" "TIGGLYte" "" "" "" "" 0 "" "" "TIGGLYte"
"MAR11512" "" "EX_tiggly_e" "" "" "" "EX_tiggly[e]" "" "" "" "" 0 "" "" "EX_tiggly[e]"
"MAR11513" "" "TD2GLTRCOAm" "" "" "" "TD2GLTRCOAm" "" "" "" "" 0 "" "" "TD2GLTRCOAm"
-"MAR11514" "" "3HGLUTCOAm" "" "" "" "3HGLUTCOAm" "" "" "" "" 0 "" "" "3HGLUTCOAm"
+"MAR11514" "" "3HGLUTCOAm" "" "" "" "3HGLUTCOAm" "" "" "" "" 0 "RHEA:68458" "RHEA:68456" "3HGLUTCOAm"
"MAR11515" "" "3OHGLUTACm" "" "" "" "3OHGLUTACm" "" "" "" "" 0 "" "" "3OHGLUTACm"
"MAR11516" "" "3OHGLUTACtm" "" "" "" "3OHGLUTACtm" "" "" "" "" 0 "" "" "3OHGLUTACtm"
"MAR11517" "" "3OHGLUTACte" "" "" "" "3OHGLUTACte" "" "" "" "" 0 "" "" "3OHGLUTACte"
@@ -11380,10 +11260,10 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR11580" "" "CE7172UPKt" "" "" "" "CE7172UPKt" "" "" "" "" 0 "" "" "CE7172UPKt"
"MAR11581" "" "NRVNCABCt" "" "" "" "NRVNCABCt" "" "" "" "" 0 "" "" "NRVNCABCt"
"MAR11582" "" "PAFABCt" "" "" "" "PAFABCt" "" "" "" "" 0 "" "" "PAFABCt"
-"MAR11583" "" "PAIL_hs_SECt" "" "" "" "PAIL_hs_SECt" "" "" "" "" 0 "" "" "PAIL_hs_SECt"
-"MAR11584" "" "PAILPALM_HSSECt" "" "" "" "PAILPALM_HSSECt" "" "" "" "" 0 "" "" "PAILPALM_HSSECt"
-"MAR11585" "" "PAILR_HSSECt" "" "" "" "PAILR_HSSECt" "" "" "" "" 0 "" "" "PAILR_HSSECt"
-"MAR11586" "" "" "" "" "" "PAILSTE_HSSECt" "" "" "" "" 0 "" "" "PAILSTE_HSSECt"
+"MAR11583" "" "PAIL_hs_SECt" "" "" "" "PAIL_hs_SECt;PAIL_hs_t1e" "" "" "" "" 0 "" "" "PAIL_hs_SECt;PAIL_hs_t1e"
+"MAR11584" "" "PAILPALM_HSSECt" "" "" "" "PAILPALM_HSSECt;PAILPALM_HSt1e" "" "" "" "" 0 "" "" "PAILPALM_HSSECt;PAILPALM_HSt1e"
+"MAR11585" "" "PAILR_HSSECt" "" "" "" "PAILR_HSSECt;PAILR_HSt1e" "" "" "" "" 0 "" "" "PAILR_HSSECt;PAILR_HSt1e"
+"MAR11586" "" "" "" "" "" "PAILSTE_HSSECt;PAILSTE_HSt1e" "" "" "" "" 0 "" "" "PAILSTE_HSSECt;PAILSTE_HSt1e"
"MAR11587" "" "PCHLN225_HSABCt" "" "" "" "PCHLN225_HSABCt" "" "" "" "" 0 "" "" "PCHLN225_HSABCt"
"MAR11588" "" "PCHOL2LINL_HSABCt" "" "" "" "PCHOL2LINL_HSABCt" "" "" "" "" 0 "" "" "PCHOL2LINL_HSABCt"
"MAR11589" "" "PCHOL2OLE_HSABCt" "" "" "" "PCHOL2OLE_HSABCt" "" "" "" "" 0 "" "" "PCHOL2OLE_HSABCt"
@@ -11427,29 +11307,25 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR11627" "" "PEPALM_HSASBCt" "" "" "" "PEPALM_HSASBCt" "" "" "" "" 0 "" "" "PEPALM_HSASBCt"
"MAR11628" "" "PESTE_HSABCt" "" "" "" "PESTE_HSABCt" "" "" "" "" 0 "" "" "PESTE_HSABCt"
"MAR11629" "" "SPHMYLN_HsSECt" "" "" "" "SPHMYLN_HsSECt" "" "" "" "" 0 "" "" "SPHMYLN_HsSECt"
-"MAR11630" "" "SPHMYLN180241_hs_SECt" "" "" "" "SPHMYLN180241_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN180241_hs_SECt"
-"MAR11631" "" "SPHMYLN18114_hs_SECt" "" "" "" "SPHMYLN18114_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN18114_hs_SECt"
-"MAR11632" "" "SPHMYLN18115_hs_SECt" "" "" "" "SPHMYLN18115_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN18115_hs_SECt"
-"MAR11633" "" "SPHMYLN18116_hs_SECt" "" "" "" "SPHMYLN18116_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN18116_hs_SECt"
-"MAR11634" "" "SPHMYLN181161_hs_SECt" "" "" "" "SPHMYLN181161_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN181161_hs_SECt"
-"MAR11635" "" "SPHMYLN18117_hs_SECt" "" "" "" "SPHMYLN18117_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN18117_hs_SECt"
-"MAR11636" "" "SPHMYLN18118_hs_SECt" "" "" "" "SPHMYLN18118_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN18118_hs_SECt"
-"MAR11637" "" "SPHMYLN181181_hs_SECt" "" "" "" "SPHMYLN181181_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN181181_hs_SECt"
-"MAR11638" "" "SPHMYLN18120_hs_SECt" "" "" "" "SPHMYLN18120_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN18120_hs_SECt"
-"MAR11639" "" "SPHMYLN181201_hs_SECt" "" "" "" "SPHMYLN181201_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN181201_hs_SECt"
-"MAR11640" "" "SPHMYLN18121_hs_SECt" "" "" "" "SPHMYLN18121_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN18121_hs_SECt"
-"MAR11641" "" "SPHMYLN18122_hs_SECt" "" "" "" "SPHMYLN18122_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN18122_hs_SECt"
-"MAR11642" "" "SPHMYLN181221_hs_SECt" "" "" "" "SPHMYLN181221_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN181221_hs_SECt"
-"MAR11643" "" "SPHMYLN18123_hs_SECt" "" "" "" "SPHMYLN18123_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN18123_hs_SECt"
-"MAR11644" "" "SPHMYLN1824_hs_SECt" "" "" "" "SPHMYLN1824_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN1824_hs_SECt"
-"MAR11645" "" "SPHMYLN1825_hs_SECt" "" "" "" "SPHMYLN1825_hs_SECt" "" "" "" "" 0 "" "" "SPHMYLN1825_hs_SECt"
+"MAR11630" "" "SPHMYLN180241_hs_SECt" "" "" "" "SPHMYLN180241_hs_SECt;SPHMYLN180241_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN180241_hs_SECt;SPHMYLN180241_hs_t1"
+"MAR11631" "" "SPHMYLN18114_hs_SECt" "" "" "" "SPHMYLN18114_hs_SECt;SPHMYLN18114_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18114_hs_SECt;SPHMYLN18114_hs_t1"
+"MAR11632" "" "SPHMYLN18115_hs_SECt" "" "" "" "SPHMYLN18115_hs_SECt;SPHMYLN18115_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18115_hs_SECt;SPHMYLN18115_hs_t1"
+"MAR11633" "" "SPHMYLN18116_hs_SECt" "" "" "" "SPHMYLN18116_hs_SECt;SPHMYLN18116_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18116_hs_SECt;SPHMYLN18116_hs_t1"
+"MAR11634" "" "SPHMYLN181161_hs_SECt" "" "" "" "SPHMYLN181161_hs_SECt;SPHMYLN181161_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181161_hs_SECt;SPHMYLN181161_hs_t1"
+"MAR11635" "" "SPHMYLN18117_hs_SECt" "" "" "" "SPHMYLN18117_hs_SECt;SPHMYLN18117_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18117_hs_SECt;SPHMYLN18117_hs_t1"
+"MAR11636" "" "SPHMYLN18118_hs_SECt" "" "" "" "SPHMYLN18118_hs_SECt;SPHMYLN18118_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18118_hs_SECt;SPHMYLN18118_hs_t1"
+"MAR11637" "" "SPHMYLN181181_hs_SECt" "" "" "" "SPHMYLN181181_hs_SECt;SPHMYLN181181_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181181_hs_SECt;SPHMYLN181181_hs_t1"
+"MAR11638" "" "SPHMYLN18120_hs_SECt" "" "" "" "SPHMYLN18120_hs_SECt;SPHMYLN18120_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18120_hs_SECt;SPHMYLN18120_hs_t1"
+"MAR11639" "" "SPHMYLN181201_hs_SECt" "" "" "" "SPHMYLN181201_hs_SECt;SPHMYLN181201_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181201_hs_SECt;SPHMYLN181201_hs_t1"
+"MAR11640" "" "SPHMYLN18121_hs_SECt" "" "" "" "SPHMYLN18121_hs_SECt;SPHMYLN18121_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18121_hs_SECt;SPHMYLN18121_hs_t1"
+"MAR11641" "" "SPHMYLN18122_hs_SECt" "" "" "" "SPHMYLN18122_hs_SECt;SPHMYLN18122_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18122_hs_SECt;SPHMYLN18122_hs_t1"
+"MAR11642" "" "SPHMYLN181221_hs_SECt" "" "" "" "SPHMYLN181221_hs_SECt;SPHMYLN181221_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181221_hs_SECt;SPHMYLN181221_hs_t1"
+"MAR11643" "" "SPHMYLN18123_hs_SECt" "" "" "" "SPHMYLN18123_hs_SECt;SPHMYLN18123_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18123_hs_SECt;SPHMYLN18123_hs_t1"
+"MAR11644" "" "SPHMYLN1824_hs_SECt" "" "" "" "SPHMYLN1824_hs_SECt;SPHMYLN1824_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN1824_hs_SECt;SPHMYLN1824_hs_t1"
+"MAR11645" "" "SPHMYLN1825_hs_SECt" "" "" "" "SPHMYLN1825_hs_SECt;SPHMYLN1825_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN1825_hs_SECt;SPHMYLN1825_hs_t1"
"MAR11646" "" "3AIBt1" "" "" "" "3AIBt1" "" "" "" "" 0 "" "" "3AIBt1"
"MAR11647" "" "APRGSTRNt1e" "" "" "" "APRGSTRNt1e" "" "" "" "" 0 "" "" "APRGSTRNt1e"
"MAR11648" "" "DIGALSGALSIDEATPte" "" "" "" "DIGALSGALSIDEATPte" "" "" "" "" 0 "" "" "DIGALSGALSIDEATPte"
-"MAR11649" "" "" "" "" "" "PAIL_hs_t1e" "" "" "" "" 0 "" "" "PAIL_hs_t1e"
-"MAR11650" "" "" "" "" "" "PAILR_HSt1e" "" "" "" "" 0 "" "" "PAILR_HSt1e"
-"MAR11651" "" "" "" "" "" "PAILPALM_HSt1e" "" "" "" "" 0 "" "" "PAILPALM_HSt1e"
-"MAR11652" "" "" "" "" "" "PAILSTE_HSt1e" "" "" "" "" 0 "" "" "PAILSTE_HSt1e"
"MAR11653" "" "PCHOL2LINL_HSt1e" "" "" "" "PCHOL2LINL_HSt1e" "" "" "" "" 0 "" "" "PCHOL2LINL_HSt1e"
"MAR11654" "" "PCHOL2OLE_HSt1e" "" "" "" "PCHOL2OLE_HSt1e" "" "" "" "" 0 "" "" "PCHOL2OLE_HSt1e"
"MAR11655" "" "PCHOL2STE_HSt1e" "" "" "" "PCHOL2STE_HSt1e" "" "" "" "" 0 "" "" "PCHOL2STE_HSt1e"
@@ -11494,39 +11370,22 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR11694" "" "PESTE_HSt1e" "" "" "" "PESTE_HSt1e" "" "" "" "" 0 "" "" "PESTE_HSt1e"
"MAR11695" "" "SPHMYLN_HsATPte" "" "" "" "SPHMYLN_HsATPte" "" "" "" "" 0 "" "" "SPHMYLN_HsATPte"
"MAR11696" "" "SPHMYLN180241_hs_ATPt" "" "" "" "SPHMYLN180241_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN180241_hs_ATPt"
-"MAR11697" "" "" "" "" "" "SPHMYLN180241_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN180241_hs_t1"
"MAR11698" "" "SPHMYLN18114_hs_ATPt" "" "" "" "SPHMYLN18114_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN18114_hs_ATPt"
-"MAR11699" "" "" "" "" "" "SPHMYLN18114_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18114_hs_t1"
"MAR11700" "" "SPHMYLN18115_hs_ATPt" "" "" "" "SPHMYLN18115_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN18115_hs_ATPt"
-"MAR11701" "" "" "" "" "" "SPHMYLN18115_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18115_hs_t1"
"MAR11702" "" "SPHMYLN18116_hs_ATPt" "" "" "" "SPHMYLN18116_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN18116_hs_ATPt"
-"MAR11703" "" "" "" "" "" "SPHMYLN18116_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18116_hs_t1"
"MAR11704" "" "SPHMYLN181161_hs_ATPt" "" "" "" "SPHMYLN181161_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN181161_hs_ATPt"
-"MAR11705" "" "" "" "" "" "SPHMYLN181161_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181161_hs_t1"
"MAR11706" "" "SPHMYLN18117_hs_ATPt" "" "" "" "SPHMYLN18117_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN18117_hs_ATPt"
-"MAR11707" "" "" "" "" "" "SPHMYLN18117_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18117_hs_t1"
"MAR11708" "" "SPHMYLN18118_hs_ATPt" "" "" "" "SPHMYLN18118_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN18118_hs_ATPt"
-"MAR11709" "" "" "" "" "" "SPHMYLN18118_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18118_hs_t1"
"MAR11710" "" "SPHMYLN181181_hs_ATPt" "" "" "" "SPHMYLN181181_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN181181_hs_ATPt"
-"MAR11711" "" "" "" "" "" "SPHMYLN181181_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181181_hs_t1"
"MAR11712" "" "SPHMYLN18120_hs_ATPt" "" "" "" "SPHMYLN18120_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN18120_hs_ATPt"
-"MAR11713" "" "" "" "" "" "SPHMYLN18120_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18120_hs_t1"
"MAR11714" "" "SPHMYLN181201_hs_ATPt" "" "" "" "SPHMYLN181201_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN181201_hs_ATPt"
-"MAR11715" "" "" "" "" "" "SPHMYLN181201_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181201_hs_t1"
"MAR11716" "" "SPHMYLN18121_hs_ATPt" "" "" "" "SPHMYLN18121_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN18121_hs_ATPt"
-"MAR11717" "" "" "" "" "" "SPHMYLN18121_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18121_hs_t1"
"MAR11718" "" "SPHMYLN18122_hs_ATPt" "" "" "" "SPHMYLN18122_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN18122_hs_ATPt"
-"MAR11719" "" "" "" "" "" "SPHMYLN18122_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18122_hs_t1"
"MAR11720" "" "SPHMYLN181221_hs_ATPt" "" "" "" "SPHMYLN181221_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN181221_hs_ATPt"
-"MAR11721" "" "" "" "" "" "SPHMYLN181221_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN181221_hs_t1"
"MAR11722" "" "SPHMYLN18123_hs_ATPt" "" "" "" "SPHMYLN18123_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN18123_hs_ATPt"
-"MAR11723" "" "" "" "" "" "SPHMYLN18123_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN18123_hs_t1"
"MAR11724" "" "SPHMYLN1824_hs_ATPt" "" "" "" "SPHMYLN1824_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN1824_hs_ATPt"
-"MAR11725" "" "" "" "" "" "SPHMYLN1824_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN1824_hs_t1"
"MAR11726" "" "SPHMYLN1825_hs_ATPt" "" "" "" "SPHMYLN1825_hs_ATPt" "" "" "" "" 0 "" "" "SPHMYLN1825_hs_ATPt"
-"MAR11727" "" "" "" "" "" "SPHMYLN1825_hs_t1" "" "" "" "" 0 "" "" "SPHMYLN1825_hs_t1"
-"MAR11728" "" "" "" "" "" "2HXIC_Lt1e" "" "" "" "" 0 "" "" "2HXIC_Lt1e"
-"MAR11729" "" "" "" "" "" "2HXIC_Lt2e" "" "" "" "" 0 "" "" "2HXIC_Lt2e"
+"MAR11728" "" "" "" "" "" "2HXIC_Lt1e;2HXIC_Lt2e" "" "" "" "" 0 "" "" "2HXIC_Lt1e;2HXIC_Lt2e"
"MAR11730" "" "" "" "" "" "EX_2hxic_L[e]" "" "" "" "" 0 "" "" "EX_2hxic_L[e]"
"MAR11731" "" "2HYDOGOAT3t" "" "" "" "2HYDOGOAT3t" "" "" "" "" 0 "" "" "2HYDOGOAT3t"
"MAR11732" "" "" "" "" "" "EX_2hydog[e]" "" "" "" "" 0 "" "" "EX_2hydog[e]"
@@ -11783,21 +11642,16 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR11983" "" "EX_idl_hs_e" "" "" "" "EX_idl_hs[e]" "" "" "" "" 0 "" "" "EX_idl_hs[e]"
"MAR11984" "" "EX_ldl_hs_e" "" "" "" "EX_ldl_hs[e]" "" "" "" "" 0 "" "" "EX_ldl_hs[e]"
"MAR11985" "" "EX_hdl_hs_e" "" "" "" "EX_hdl_hs[e]" "" "" "" "" 0 "" "" "EX_hdl_hs[e]"
-"MAR11986" "" "" "" "" "" "HC00005te" "" "" "" "" 0 "" "" "HC00005te"
+"MAR11986" "" "" "" "" "" "HC00005te;HC00005t1e" "" "" "" "" 0 "" "" "HC00005te;HC00005t1e"
"MAR11987" "" "EX_HC00005_e" "" "" "" "EX_HC00005[e]" "" "" "" "" 0 "" "" "EX_HC00005[e]"
-"MAR11988" "" "" "" "" "" "HC00005t1e" "" "" "" "" 0 "" "" "HC00005t1e"
-"MAR11989" "" "" "" "" "" "HC00006te" "" "" "" "" 0 "" "" "HC00006te"
+"MAR11989" "" "" "" "" "" "HC00006te;HC00006t1e" "" "" "" "" 0 "" "" "HC00006te;HC00006t1e"
"MAR11990" "" "EX_HC00006_e" "" "" "" "EX_HC00006[e]" "" "" "" "" 0 "" "" "EX_HC00006[e]"
-"MAR11991" "" "" "" "" "" "HC00006t1e" "" "" "" "" 0 "" "" "HC00006t1e"
-"MAR11992" "" "" "" "" "" "HC00007te" "" "" "" "" 0 "" "" "HC00007te"
+"MAR11992" "" "" "" "" "" "HC00007te;HC00007t1e" "" "" "" "" 0 "" "" "HC00007te;HC00007t1e"
"MAR11993" "" "EX_HC00007_e" "" "" "" "EX_HC00007[e]" "" "" "" "" 0 "" "" "EX_HC00007[e]"
-"MAR11994" "" "" "" "" "" "HC00007t1e" "" "" "" "" 0 "" "" "HC00007t1e"
-"MAR11995" "" "" "" "" "" "HC00008te" "" "" "" "" 0 "" "" "HC00008te"
+"MAR11995" "" "" "" "" "" "HC00008te;HC00008t1e" "" "" "" "" 0 "" "" "HC00008te;HC00008t1e"
"MAR11996" "" "EX_HC00008_e" "" "" "" "EX_HC00008[e]" "" "" "" "" 0 "" "" "EX_HC00008[e]"
-"MAR11997" "" "" "" "" "" "HC00008t1e" "" "" "" "" 0 "" "" "HC00008t1e"
-"MAR11998" "" "" "" "" "" "HC00009te" "" "" "" "" 0 "" "" "HC00009te"
+"MAR11998" "" "" "" "" "" "HC00009te;HC00009t1e" "" "" "" "" 0 "" "" "HC00009te;HC00009t1e"
"MAR11999" "" "EX_HC00009_e" "" "" "" "EX_HC00009[e]" "" "" "" "" 0 "" "" "EX_HC00009[e]"
-"MAR12000" "" "" "" "" "" "HC00009t1e" "" "" "" "" 0 "" "" "HC00009t1e"
"MAR12001" "" "DOPASULT4" "" "" "" "DOPASULT4" "" "" "" "" 0 "" "" "DOPASULT4"
"MAR12002" "" "UDPG4DOPA" "" "" "" "UDPG4DOPA" "" "" "" "" 0 "" "" "UDPG4DOPA"
"MAR12003" "" "UDPG3DOPA" "" "" "" "UDPG3DOPA" "" "" "" "" 0 "" "" "UDPG3DOPA"
@@ -11809,7 +11663,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR12009" "" "EX_dopa4glcur_e" "" "" "" "EX_dopa4glcur[e]" "" "" "" "" 0 "" "" "EX_dopa4glcur[e]"
"MAR12010" "" "DOPA3GLCURt" "" "" "" "DOPA3GLCURt" "" "" "" "" 0 "" "" "DOPA3GLCURt"
"MAR12011" "" "EX_dopa3glcur_e" "" "" "" "EX_dopa3glcur[e]" "" "" "" "" 0 "" "" "EX_dopa3glcur[e]"
-"MAR12012" "" "DOPACHRMDC" "" "" "" "DOPACHRMDC" "" "" "" "" 0 "" "" "DOPACHRMDC"
+"MAR12012" "R03674" "DOPACHRMDC" "" "" "" "DOPACHRMDC;HMR_9733" "MNXR108330" "HMR_9733" "RCR14346" "" 0 "" "" "DOPACHRMDC;HMR_9733;MAR09733"
"MAR12013" "" "CE5026t" "" "" "" "CE5026t" "" "" "" "" 0 "" "" "CE5026t"
"MAR12014" "" "GGTe_1" "" "" "" "GGTe_1" "" "" "" "" 0 "" "" "GGTe_1"
"MAR12015" "" "CYSGLYPTASEe_1" "" "" "" "CYSGLYPTASEe_1" "" "" "" "" 0 "" "" "CYSGLYPTASEe_1"
@@ -11821,7 +11675,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR12021" "" "NADQNOXR" "" "" "" "NADQNOXR" "" "" "" "" 0 "" "" "NADQNOXR"
"MAR12022" "" "DACT" "" "" "" "DACT" "" "" "" "" 0 "" "" "DACT"
"MAR12023" "" "DACGST" "" "" "" "DACGST" "" "" "" "" 0 "" "" "DACGST"
-"MAR12024" "" "TYRDHINDOX" "" "" "" "TYRDHINDOX" "" "" "" "" 0 "" "" "TYRDHINDOX"
+"MAR12024" "R04884" "TYRDHINDOX" "" "" "" "HMR_9734;TYRDHINDOX" "MNXR109190" "HMR_9734" "RCR14347" "" 0 "RHEA:33516" "RHEA:33515" "HMR_9734;TYRDHINDOX;MAR09734"
"MAR12025" "" "4GLU56DIHDINDt" "" "" "" "4GLU56DIHDINDt" "" "" "" "" 0 "" "" "4GLU56DIHDINDt"
"MAR12026" "" "EX_4glu56dihdind_e" "" "" "" "EX_4glu56dihdind[e]" "" "" "" "" 0 "" "" "EX_4glu56dihdind[e]"
"MAR12027" "" "5CYSDOPAt" "" "" "" "5CYSDOPAt" "" "" "" "" 0 "" "" "5CYSDOPAt"
@@ -12861,9 +12715,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR13061" "" "EX_M03045_e" "" "" "" "EX_M03045[e]" "" "" "" "" 0 "" "" "EX_M03045[e]"
"MAR13062" "" "EX_M03051_e" "" "" "" "EX_M03051[e]" "" "" "" "" 0 "" "" "EX_M03051[e]"
"MAR13063" "" "EX_M03153_e" "" "" "" "EX_M03153[e]" "" "" "" "" 0 "" "" "EX_M03153[e]"
-"MAR13064" "" "" "" "" "" "EX_M01268[e]" "" "" "" "" 0 "" "" "EX_M01268[e]"
"MAR13065" "" "" "" "" "" "EX_HC02080[e]" "" "" "" "" 0 "" "" "EX_HC02080[e]"
-"MAR13066" "" "EX_h2co3_e" "" "" "" "EX_h2co3[e]" "MNXR98639" "" "" "" 0 "" "" "EX_h2co3[e]"
"MAR13067" "" "EX_M02837_e" "" "" "" "EX_M02837[e]" "" "" "" "" 0 "" "" "EX_M02837[e]"
"MAR13068" "" "" "" "" "" "EX_M02382[e]" "" "" "" "" 0 "" "" "EX_M02382[e]"
"MAR13069" "" "" "" "" "" "EX_M02035[e]" "" "" "" "" 0 "" "" "EX_M02035[e]"
@@ -12881,7 +12733,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR13081" "" "CYOOm3i" "" "" "" "CYOOm3i" "" "" "" "" 0 "" "" "CYOOm3i"
"MAR10023" "" "" "" "" "" "" "" "" "" "" 0 "" "" "HMR_10023"
"MAR10024" "" "" "" "" "" "" "" "" "" "" 0 "" "" "HMR_10024"
-"MAR10025" "" "" "" "" "" "" "" "" "" "" 0 "" "" "HMR_10025"
"MAR10026" "" "" "" "" "" "" "" "" "" "" 0 "" "" "HMR_10026"
"MAR10027" "" "" "" "" "" "" "" "" "" "" 0 "" "" "HMR_10027"
"MAR10028" "" "" "" "" "" "" "" "" "" "" 0 "" "" "HMR_10028"
@@ -12995,7 +12846,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR13086" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
"MAR13087" "R02243" "" "" "" "" "" "MNXR107402" "" "" "" 0 "RHEA:15254" "RHEA:15253" ""
"MAR20001" "R02124" "HMR_6633;RDH1;R_HMR_6633;R_RDH1;R_TRETINOLOR1;TRETINOLOR1" "" "" "" "" "MNXR189842" "" "" "" 0 "RHEA:21284" "" ""
-"MAR20002" "R02124" "HMR_6633;RDH1;R_HMR_6633;R_RDH1;R_TRETINOLOR1;TRETINOLOR1" "" "" "" "" "MNXR189842" "" "" "" 0 "RHEA:21284" "" ""
"MAR20003" "R08382" "RDH2;R_RDH2" "" "" "" "" "MNXR103441" "" "" "" 0 "RHEA:42052" "" ""
"MAR20005" "" "" "" "" "" "" "MNXR167709" "" "" "" 0 "RHEA:39803" "" ""
"MAR20006" "" "" "" "" "" "" "MNXR167709" "" "" "" 0 "RHEA:39803" "" ""
@@ -13006,13 +12856,10 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR20011" "R02123" "HMR_6647;RADH;R_HMR_6647;R_RADH" "" "" "" "" "MNXR146215" "" "" "" 0 "RHEA:42080" "" ""
"MAR20012" "R02123" "HMR_6647;RADH;R_HMR_6647;R_RADH" "" "" "" "" "MNXR146215" "" "" "" 0 "RHEA:42080" "" ""
"MAR20013" "R03225" "" "" "" "" "" "MNXR108031" "" "" "" 0 "RHEA:23048" "" ""
-"MAR20014" "R03283" "R_TMABADH;TMABADH" "" "" "" "" "MNXR104876" "" "" "" 0 "RHEA:17985" "" ""
-"MAR20015" "R02549" "ABUTD;ABUTDm;R_ABUTD;R_ABUTDm" "" "" "" "" "MNXR95191" "" "" "" 0 "RHEA:19105" "" ""
"MAR20016" "R01704" "ALDD16;R_ALDD16" "" "" "" "" "MNXR95739" "" "" "" 0 "RHEA:33739" "" ""
"MAR20017" "" "ALDD8;R_ALDD8" "" "" "" "" "MNXR95760" "" "" "" 0 "RHEA:44100" "" ""
"MAR20018" "R04557" "" "" "" "R-HSA-2161692.2" "" "MNXR108965" "" "" "" 0 "RHEA:11912" "" ""
"MAR20019" "R04557" "" "" "" "R-HSA-2161692.2" "" "MNXR108965" "" "" "" 0 "RHEA:11912" "" ""
-"MAR20020" "R00303" "G6PP;G6PPer;R_G6PP;R_G6PPer" "" "" "" "" "MNXR195425" "" "" "" 0 "RHEA:16689" "" ""
"MAR20021" "" "" "" "" "" "" "MNXR169432" "" "" "" 0 "RHEA:50076" "" ""
"MAR20022" "" "" "" "" "" "" "MNXR169432" "" "" "" 0 "RHEA:50076" "" ""
"MAR20023" "" "" "" "" "" "" "MNXR167706" "" "" "" 0 "RHEA:39787" "" ""
@@ -13043,7 +12890,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR20049" "" "" "" "" "" "" "MNXR167567" "" "" "" 0 "RHEA:39015" "" ""
"MAR20050" "" "" "" "" "" "" "MNXR167567" "" "" "" 0 "RHEA:39015" "" ""
"MAR20051" "" "ALDD21;RE3076X;R_ALDD21;R_RE3076X" "" "" "" "" "MNXR95747" "" "" "" 0 "RHEA:44016" "" ""
-"MAR20052" "" "ALDD21;RE3076X;R_ALDD21;R_RE3076X" "" "" "" "" "MNXR95747" "" "" "" 0 "RHEA:44016" "" ""
"MAR20053" "" "ALDD18;R_ALDD18" "" "" "" "" "MNXR95741" "" "" "" 0 "RHEA:44020" "" ""
"MAR20054" "" "ALDD18;R_ALDD18" "" "" "" "" "MNXR95741" "" "" "" 0 "RHEA:44020" "" ""
"MAR20055" "" "ALDD12;R_ALDD12" "" "" "" "" "MNXR95735" "" "" "" 0 "RHEA:44168" "" ""
@@ -13057,10 +12903,68 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR20063" "" "ALDD7;R_ALDD7" "" "" "" "" "MNXR95759" "" "" "" 0 "RHEA:44108" "" ""
"MAR20064" "R08146" "" "" "" "" "" "MNXR111724" "" "" "" 0 "RHEA:24216" "" ""
"MAR20065" "R08146" "" "" "" "" "" "MNXR111724" "" "" "" 0 "RHEA:24216" "" ""
-"MAR20066" "R00009" "CAT;CATm;CATp;CATpp;CATr;R_CAT;R_CATm;R_CATp;R_CATpp;R_CATr" "" "" "" "" "MNXR96455" "" "" "" 0 "RHEA:20309" "" ""
"MAR20067" "" "" "" "" "" "" "MNXR133799" "" "" "" 0 "RHEA:55936" "" ""
"MAR20068" "" "" "" "" "" "" "MNXR171534" "" "" "" 0 "RHEA:60632" "" ""
"MAR20069" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
"MAR20070" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
"MAR20071" "R00490" "" "" "" "" "" "MNXR165843" "" "" "" 0 "RHEA:16962" "" ""
"MAR20072" "R00490" "" "" "" "" "" "MNXR165843" "" "" "" 0 "RHEA:16962" "" ""
+"MAR20073" "" "" "" "" "" "" "MNXR168658" "" "" "" 0 "RHEA:45376" "" ""
+"MAR20074" "" "" "" "" "" "" "MNXR168658" "" "" "" 0 "RHEA:45376" "" ""
+"MAR20075" "" "" "" "" "" "" "MNXR168659" "" "" "" 0 "RHEA:45380" "" ""
+"MAR20076" "" "" "" "" "" "" "MNXR168659" "" "" "" 0 "RHEA:45380" "" ""
+"MAR20077" "" "" "" "" "" "" "MNXR168653" "" "" "" 0 "RHEA:45356" "" ""
+"MAR20078" "" "" "" "" "" "" "MNXR168653" "" "" "" 0 "RHEA:45356" "" ""
+"MAR20079" "" "" "" "" "" "" "MNXR168654" "" "" "" 0 "RHEA:45360" "" ""
+"MAR20080" "" "" "" "" "" "" "MNXR168654" "" "" "" 0 "RHEA:45360" "" ""
+"MAR20081" "" "" "" "" "" "" "MNXR168655" "" "" "" 0 "RHEA:45364" "" ""
+"MAR20082" "" "" "" "" "" "" "MNXR168655" "" "" "" 0 "RHEA:45364" "" ""
+"MAR20083" "" "" "" "" "" "" "MNXR167977" "" "" "" 0 "RHEA:41299" "" ""
+"MAR20084" "" "" "" "" "" "" "MNXR167977" "" "" "" 0 "RHEA:41299" "" ""
+"MAR20085" "" "" "" "" "" "" "MNXR168657" "" "" "" 0 "RHEA:45372" "" ""
+"MAR20086" "" "" "" "" "" "" "MNXR168657" "" "" "" 0 "RHEA:45372" "" ""
+"MAR20087" "" "" "" "" "" "" "MNXR168656" "" "" "" 0 "RHEA:45368" "" ""
+"MAR20088" "" "" "" "" "" "" "MNXR168656" "" "" "" 0 "RHEA:45368" "" ""
+"MAR20089" "R02701" "" "" "" "" "" "MNXR151808" "" "" "" 0 "RHEA:18533" "" ""
+"MAR20090" "R07411" "HEMEOS;HEMEOS_1;HEMEOSm;HEMEOSm_1;R_HEMEOS;R_HEMEOS_1;R_HEMEOSm;R_HEMEOSm_1" "" "" "" "" "MNXR115959" "" "" "" 0 "RHEA:28070" "" ""
+"MAR20091" "R07411" "HEMEOS;HEMEOS_1;HEMEOSm;HEMEOSm_1;R_HEMEOS;R_HEMEOS_1;R_HEMEOSm;R_HEMEOSm_1" "" "" "" "" "MNXR115959" "" "" "" 0 "RHEA:28070" "" ""
+"MAR20092" "R07411" "HEMEOS;HEMEOS_1;HEMEOSm;HEMEOSm_1;R_HEMEOS;R_HEMEOS_1;R_HEMEOSm;R_HEMEOSm_1" "" "" "" "" "MNXR115959" "" "" "" 0 "RHEA:28070" "" ""
+"MAR20093" "" "" "" "" "" "" "MNXR168605" "" "" "" 0 "RHEA:45064" "" ""
+"MAR20094" "" "" "" "" "" "" "MNXR168677" "" "" "" 0 "RHEA:45456" "" ""
+"MAR20095" "" "" "" "" "" "" "MNXR168676" "" "" "" 0 "RHEA:45452" "" ""
+"MAR20096" "" "" "" "" "" "" "MNXR132111" "" "" "" 0 "RHEA:38891" "" ""
+"MAR20097" "" "" "" "" "" "" "MNXR127741" "" "" "" 0 "RHEA:41291" "" ""
+"MAR20098" "" "" "" "" "" "" "" "" "" "" 0 "RHEA:53008" "" ""
+"MAR20099" "R12391" "" "" "" "" "" "MNXR123366" "" "" "" 0 "RHEA:57060" "" ""
+"MAR20100" "" "" "" "" "" "" "" "" "" "" 0 "RHEA:68792" "" ""
+"MAR20101" "R12390" "" "" "" "" "" "MNXR163813" "" "" "" 0 "RHEA:59244" "" ""
+"MAR20102" "" "" "" "" "" "" "" "" "" "" 0 "RHEA:74083" "" ""
+"MAR20103" "" "" "" "" "" "" "" "" "" "" 0 "RHEA:74083" "" ""
+"MAR20104" "" "" "" "" "" "" "" "" "" "" 0 "RHEA:74083" "" ""
+"MAR20105" "" "" "" "" "" "" "" "" "" "" 0 "RHEA:74083" "" ""
+"MAR20106" "" "HBZOPT10m;R_HBZOPT10m" "" "" "" "" "MNXR100567" "" "" "" 0 "RHEA:44564" "" ""
+"MAR20107" "" "HBZOPT10m;R_HBZOPT10m" "" "" "" "" "MNXR100567" "" "" "" 0 "RHEA:44564" "" ""
+"MAR20108" "" "HBZOPT10m;R_HBZOPT10m" "" "" "" "" "MNXR100567" "" "" "" 0 "RHEA:44564" "" ""
+"MAR20109" "" "HBZOPT10m;R_HBZOPT10m" "" "" "" "" "MNXR100567" "" "" "" 0 "RHEA:44564" "" ""
+"MAR20110" "" "" "" "" "" "" "MNXR102097" "" "" "" 0 "RHEA:15642" "RHEA:15641" ""
+"MAR20111" "R00472" "" "" "" "" "" "MNXR188337" "" "" "" 0 "RHEA:18182" "RHEA:18181" ""
+"MAR20112" "R04385" "" "" "" "" "" "MNXR96330" "" "" "" 0 "" "RHEA:13501" ""
+"MAR20113" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20114" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20115" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20116" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20117" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20118" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20119" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20120" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20121" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20122" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20123" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20124" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20125" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20126" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20127" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20128" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20129" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20130" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""
+"MAR20131" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""