From 1eb71c613fcf4cdad4158ef5d34e6043130943bc Mon Sep 17 00:00:00 2001 From: Hao Wang Date: Sat, 14 Oct 2023 23:01:57 +0200 Subject: [PATCH] fix: remove MAR08564 and MAR08565 - remove MAR08564+MAR08565 that are duplicate to MAR04222 - reverse reaction direction of MAR04222 --- model/Human-GEM.yml | 45 +++++---------------------------------------- 1 file changed, 5 insertions(+), 40 deletions(-) diff --git a/model/Human-GEM.yml b/model/Human-GEM.yml index 250ee363..951ca6f4 100644 --- a/model/Human-GEM.yml +++ b/model/Human-GEM.yml @@ -81699,41 +81699,6 @@ - subsystem: - "Tryptophan metabolism" - confidence_score: 0 - - !!omap - - id: "MAR08564" - - name: "" - - metabolites: !!omap - - MAM00926c: 1 - - MAM01306c: -1 - - MAM01974c: 1 - - MAM02319c: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000109576 or ENSG00000137944 or ENSG00000171097" - - rxnNotes: "" - - rxnFrom: "HMRdatabase" - - eccodes: "2.6.1.7" - - references: "" - - subsystem: - - "Tryptophan metabolism" - - confidence_score: 0 - - !!omap - - id: "MAR08565" - - name: "" - - metabolites: !!omap - - MAM00926c: -1 - - MAM00990c: 1 - - MAM02040c: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - rxnFrom: "HMRdatabase" - - eccodes: "" - - references: "" - - subsystem: - - "Tryptophan metabolism" - - confidence_score: 0 - !!omap - id: "MAR08566" - name: "" @@ -82834,11 +82799,11 @@ - id: "MAR04222" - name: "" - metabolites: !!omap - - MAM00990c: -1 - - MAM01306c: 1 - - MAM01974c: -1 - - MAM02040c: -1 - - MAM02319c: 1 + - MAM00990c: 1 + - MAM01306c: -1 + - MAM01974c: 1 + - MAM02040c: 1 + - MAM02319c: -1 - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "ENSG00000109576 or ENSG00000137944 or ENSG00000171097"