NAMESPACE

# Generated by roxygen2: do not edit by hand

export(get_num_cell_per_spot)
export(remove_mito_ribo)
export(run_CCI)
export(run_L_function)
export(run_Morans_I)
export(run_association_study_report)
export(run_celltype_interaction)
export(run_gene_cor)
export(run_gene_cor_celltype)
export(run_gene_mean)
export(run_gene_mean_celltype)
export(run_gene_prop)
export(run_gene_prop_celltype)
export(run_nn_correlation)
export(run_pathway_gsva)
export(run_pathway_mean)
export(run_pathway_prop)
export(run_proportion_logit)
export(run_proportion_ratio)
export(run_proportion_raw)
export(scFeatures)
import(DelayedArray)
import(EnsDb.Hsapiens.v79)
import(EnsDb.Mmusculus.v79)
import(SingleCellSignalR)
import(dplyr)
import(rmarkdown)
importFrom(AUCell,AUCell_buildRankings)
importFrom(AUCell,AUCell_calcAUC)
importFrom(AUCell,getAUC)
importFrom(BiocParallel,SerialParam)
importFrom(BiocParallel,bplapply)
importFrom(DelayedArray,DelayedArray)
importFrom(DelayedMatrixStats,colMeans2)
importFrom(DelayedMatrixStats,rowMeans2)
importFrom(DelayedMatrixStats,rowVars)
importFrom(GSVA,gsva)
importFrom(MatrixGenerics,colSums2)
importFrom(ape,Moran.I)
importFrom(cli,cli_abort)
importFrom(cli,cli_warn)
importFrom(dplyr,select)
importFrom(glue,glue)
importFrom(gtools,logit)
importFrom(methods,is)
importFrom(msigdbr,msigdbr)
importFrom(proxyC,simil)
importFrom(reshape2,melt)
importFrom(spatstat.explore,nncorr)
importFrom(spatstat.geom,pairdist)
importFrom(spatstat.geom,ppp)
importFrom(stats,lm)
importFrom(stats,quantile)
importFrom(tidyr,pivot_wider)