From c637f3e00bd09e2a5408293856df288dbf01f0fd Mon Sep 17 00:00:00 2001
From: LianeHughes <68756672+LianeHughes@users.noreply.github.com>
Date: Fri, 10 Feb 2023 13:30:48 +0100
Subject: [PATCH] Fix broken link to available data scripts

---
 layouts/datasets/single.html | 36 +++++++++++++++++++-----------------
 1 file changed, 19 insertions(+), 17 deletions(-)

diff --git a/layouts/datasets/single.html b/layouts/datasets/single.html
index 835f0c6d8..96f7394ca 100644
--- a/layouts/datasets/single.html
+++ b/layouts/datasets/single.html
@@ -9,8 +9,8 @@ <h4>Data available from research groups in Sweden</h4>
     began to use a script to query the <a href="https://europepmc.org">Europe PMC database</a> (making use of their API)
     in order to locate relevant publications. We only include data from publications about COVID-19/SARS-CoV-2 that BOTH
     involve at least one author affiliated with a Swedish research institution AND openly share reusable data and/or
-    code. <a href="https://github.com/ScilifelabDataCentre/covid-portal-scripts/blob/main/pmc_pub_seeker.py">The code
-    used for the query</a> is written in Python and, as with all of our code, it is openly available in GitHub. We
+    code. <a href="https://github.com/ScilifelabDataCentre/covid-portal-scripts/tree/main/Available_data">The code
+      used for the query</a> is written in Python and, as with all of our code, it is openly available in GitHub. We
     welcome others to reuse it and to repurpose it for other pathogens.</p>
   <p>The lists of available data may not be exhaustive as the script used to generate it does not search for every
     possible database/repository. If you find that a dataset is missing, or that the information related to it is
@@ -26,19 +26,19 @@ <h4>Data available from research groups in Sweden</h4>
 {{ $current_datatype := .Title }}
 {{ $ds_to_display := slice }}
 {{ range $index, $item := $all_data }}
-    {{ if eq $current_datatype "All data types"}}
-        {{ $ds_to_display = $ds_to_display | append $item }}
-    {{ else }}
-        {{ $add := false }}
-        {{ range .available_items }}
-            {{ if in .data_type $current_datatype }}
-                {{ $add = true }}
-            {{ end }}
-        {{ end }}
-        {{ if $add }}
-            {{ $ds_to_display = $ds_to_display | append $item }}
-        {{ end }}
-    {{ end }}
+{{ if eq $current_datatype "All data types"}}
+{{ $ds_to_display = $ds_to_display | append $item }}
+{{ else }}
+{{ $add := false }}
+{{ range .available_items }}
+{{ if in .data_type $current_datatype }}
+{{ $add = true }}
+{{ end }}
+{{ end }}
+{{ if $add }}
+{{ $ds_to_display = $ds_to_display | append $item }}
+{{ end }}
+{{ end }}
 {{ end }}
 
 <div class="container">
@@ -168,7 +168,9 @@ <h5>Data types</h5>
   });
 </script>
 
-<script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/1.13.1/js/jquery.dataTables.min.js"></script>
-<script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/1.13.1/js/dataTables.bootstrap5.min.js"></script>
+<script type="text/javascript" charset="utf8"
+  src="https://cdn.datatables.net/1.13.1/js/jquery.dataTables.min.js"></script>
+<script type="text/javascript" charset="utf8"
+  src="https://cdn.datatables.net/1.13.1/js/dataTables.bootstrap5.min.js"></script>
 
 {{ end }}
\ No newline at end of file