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noxfile.py
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"""
Perform test automation with nox.
For further details, see https://nox.thea.codes/en/stable/#
"""
import os
from pathlib import Path
import shutil
from urllib.error import HTTPError
from urllib.parse import urlparse
from urllib.request import urlopen
import nox
from nox.logger import logger
import yaml
#: Default to reusing any pre-existing nox environments.
nox.options.reuse_existing_virtualenvs = False
#: Name of the package to test.
PACKAGE = "esmf_regrid"
#: GHA-CI environment variable hook.
PY_VER = os.environ.get("PY_VER", ["3.10", "3.11", "3.12"])
#: GHA-CI environment variable hook.
COVERAGE = os.environ.get("COVERAGE", False)
#: GHA-CI environment variable hook.
#: If you change the IRIS_SOURCE here you will also need to change it in
#: the tests, wheel and benchmark workflows.
IRIS_SOURCE = os.environ.get("IRIS_SOURCE", "github:main")
IRIS_GITHUB = "https://github.com/scitools/iris.git"
LOCKFILE_PLATFORM = "linux-64"
ESMFMKFILE = "ESMFMKFILE"
def _lockfile_path(py_string: str, platform_placeholder: bool = False) -> Path:
"""
Return a constructed lockfile path for the relevant python string e.g ``py38``.
Optionally retain the ``{platform}`` placeholder to support conda-lock's
``--filename-template``.
"""
lockfile_dir = Path() / "requirements" / "locks"
name_template = "{py_string}-{platform}.lock"
if platform_placeholder:
platform = "{platform}"
else:
platform = LOCKFILE_PLATFORM
lockfile_name = name_template.format(py_string=py_string, platform=platform)
return lockfile_dir / lockfile_name
def _session_lockfile(session: nox.sessions.Session) -> Path:
"""Return the path of the session lockfile."""
return _lockfile_path(py_string=f"py{session.python.replace('.', '')}")
def _file_content(file_path: Path) -> str:
with file_path.open("r") as file:
return file.read()
def _session_cachefile(session: nox.sessions.Session) -> Path:
"""Return the path of the session lockfile cache."""
tmp_dir = Path(session.create_tmp())
cache = tmp_dir / _session_lockfile(session).name
return cache
def _venv_populated(session: nox.sessions.Session) -> bool:
"""Return True if the Conda venv has been created and the list of packages in the lockfile installed."""
return _session_cachefile(session).is_file()
def _venv_changed(session: nox.sessions.Session) -> bool:
"""Return True if the installed session is different to that specified in the lockfile."""
result = False
if _venv_populated(session):
expected = _file_content(_session_lockfile(session))
actual = _file_content(_session_cachefile(session))
result = actual != expected
return result
def _install_and_cache_venv(session: nox.sessions.Session) -> None:
"""
Cache the nox session environment.
This consists of saving a hexdigest (sha256) of the associated
Conda lock file.
Parameters
----------
session: object
A `nox.sessions.Session` object.
"""
lockfile = _session_lockfile(session)
session.conda_install(f"--file={lockfile}")
with _session_cachefile(session).open("w") as cachefile:
cachefile.write(_file_content(lockfile))
def _get_iris_github_artifact(session: nox.sessions.Session) -> str:
"""
Determine whether an Iris source artifact from GitHub is required.
This can be an Iris branch name, commit sha or tag name.
Parameters
----------
session: object
A `nox.sessions.Session` object.
Returns
-------
str
The Iris GitHub artifact.
"""
result = IRIS_SOURCE
# The CLI overrides the environment variable.
for arg in session.posargs:
if arg.startswith("--iris="):
parts = arg.split("=")
if len(parts) == 2:
result = parts[1].strip()
break
if result:
parts = result.strip().split(":")
result = None
if len(parts) == 2:
repo, artifact = parts
if repo.startswith("'") or repo.startswith('"'):
repo = repo[1:]
if repo.lower() == "github":
result = artifact
if result.endswith("'") or result.endswith('"'):
result = result[:-1]
return result
def _prepare_env(session: nox.sessions.Session) -> None:
venv_dir = session.virtualenv.location_name
esmf_mk_file = Path(venv_dir) / "lib" / "esmf.mk"
session.env[ESMFMKFILE] = esmf_mk_file.absolute()
if not _venv_populated(session):
# Environment has been created but packages not yet installed.
# Populate the environment from the lockfile.
logger.debug(f"Populating conda env: {venv_dir}")
_install_and_cache_venv(session)
elif _venv_changed(session):
# Destroy the environment and rebuild it.
logger.debug(f"Lockfile changed. Recreating conda env: {venv_dir}")
_reuse_original = session.virtualenv.reuse_existing
session.virtualenv.reuse_existing = False
session.virtualenv.create()
_install_and_cache_venv(session)
session.virtualenv.reuse_existing = _reuse_original
logger.debug(f"Environment up to date: {venv_dir}")
iris_artifact = _get_iris_github_artifact(session)
if iris_artifact:
# Install the iris source in develop mode.
tmp_dir = Path(session.create_tmp())
iris_dir = tmp_dir / "iris"
cwd = Path.cwd()
if not iris_dir.is_dir():
session.run_always(
"git", "clone", IRIS_GITHUB, str(iris_dir), external=True
)
session.cd(str(iris_dir))
session.run_always("git", "fetch", "origin", external=True)
session.run_always("git", "checkout", iris_artifact, external=True)
session.cd(str(cwd))
session.install("--no-deps", "--editable", str(iris_dir))
# Determine whether verbose diagnostics have been requested
# from the command line.
verbose = "-v" in session.posargs or "--verbose" in session.posargs
if verbose:
session.run_always("conda", "info")
session.run_always("conda", "list", f"--prefix={venv_dir}")
session.run_always(
"conda",
"list",
f"--prefix={venv_dir}",
"--explicit",
)
@nox.session
def update_lockfiles(session: nox.sessions.Session):
"""
Re-resolve env specs and store as lockfiles (``requirements/locks/``).
Original Conda environment specifications are at:
``requirements/py**.yml``. The output lock files denote the dependencies
that iris-esmf-regrid is tested against, and therefore officially supports.
Parameters
----------
session: object
A `nox.sessions.Session` object.
"""
session.install("conda-lock")
for req_file in Path("requirements").glob(r"py[0-9]*.yml"):
python_string = req_file.stem
# Generate the appropriate conda-lock template name, keeping the {platform}
# placeholder to support conda-lock's internals.
filename_template = _lockfile_path(python_string, platform_placeholder=True)
lockfile_path = _lockfile_path(python_string, platform_placeholder=False)
# Create the parent directory if it doesn't already exist.
try:
filename_template.parent.mkdir()
except FileExistsError:
pass
# Use a copy of the requirements file in a tmp dir - the file will
# be modified if installing a custom Iris checkout.
tmp_dir = Path(session.create_tmp())
req_file_local = tmp_dir / req_file.name
shutil.copy(req_file, req_file_local)
conda_lock_cmd = [
"conda-lock",
"lock",
"--kind=explicit",
f"--filename-template={filename_template}",
f"--file={req_file_local}",
f"--platform={LOCKFILE_PLATFORM}",
]
# Get the requirements for Iris too, if an Iris checkout is specified.
iris_artifact = _get_iris_github_artifact(session)
if iris_artifact:
# Remove ``iris`` from dependencies, if present.
with req_file_local.open("r+") as file:
reqs = yaml.load(file, Loader=yaml.FullLoader)
reqs["dependencies"] = [
spec for spec in reqs["dependencies"] if not spec.startswith("iris")
]
yaml.dump(reqs, file)
iris_req_name = f"{python_string}.yml"
iris_req_url = (
f"https://raw.githubusercontent.com/SciTools/iris/"
f"{iris_artifact}/requirements/ci/{iris_req_name}"
)
iris_req_file = (tmp_dir / iris_req_name).with_stem(f"{python_string}-iris")
try:
# first attempt with legacy requirements structure
connection = urlopen(iris_req_url)
except HTTPError as error:
if error.code == 404:
# retry with new requirements structure i.e., no "ci" directory
url = urlparse(iris_req_url)
parts = url.path.split("/")
parts.remove("ci")
url = url._replace(path="/".join(parts))
connection = urlopen(url.geturl())
iris_req = connection.read()
with iris_req_file.open("wb") as fout:
fout.write(iris_req)
# Conda-lock can resolve multiple requirements files together.
conda_lock_cmd.append(f"--file={iris_req_file}")
session.run(*conda_lock_cmd, silent=True)
print(f"Conda lock file created: {lockfile_path}")
@nox.session(python=PY_VER, venv_backend="conda")
def tests(session: nox.sessions.Session):
"""
Perform esmf-regrid integration and unit tests.
Parameters
----------
session: object
A `nox.sessions.Session` object.
"""
_prepare_env(session)
# Install the esmf-regrid source in develop mode.
session.install("--no-deps", "--editable", ".")
if COVERAGE:
# Execute the tests with code coverage.
session.run("pytest", "--cov-report=xml", "--cov")
else:
# Execute the tests.
session.run("pytest")
@nox.session(python=PY_VER, venv_backend="conda")
def wheel(session: nox.sessions.Session):
"""
Perform iris-esmf-regrid local wheel install and import test.
Parameters
----------
session: object
A `nox.sessions.Session` object.
"""
_prepare_env(session)
session.cd("dist")
fname = list(Path(".").glob("esmf_regrid-*.whl"))
if len(fname) == 0:
raise ValueError("Cannot find wheel to install.")
if len(fname) > 1:
emsg = f"Expected to find 1 wheel to install, found {len(fname)} instead."
raise ValueError(emsg)
session.install(fname[0].name)
session.run(
"python",
"-c",
"import esmf_regrid; print(f'{esmf_regrid.__version__=}')",
external=True,
)