Installing dependencies

[hrayjones]

Hi,

I am trying to install the dependencies into a conda environment as I do not have install permissions on my system. However, anaconda finds conflicts in the required packages. I am creating a conda environment with Python 2.7, as specified, and then installing everything mentioned in base.txt, as follows:

conda create -n ATACgraph_env python=2.7
source activate ATACgraph_env
conda install --file base_anaconda.txt

here are the contents of base_anaconda.txt:
numpy
pandas
pysam=0.11.2.2
matplotlib
matplotlib-venn
argparse
pybedtools
deepTools=3.3.0
scikit-learn

I've attached the conflicts error. It seems that numpy, pandas, pybedtools and scikit-learn require python 3. Can you please advise me on this?

Many thanks,
Helen

conflicts.pdf