From e5e48d0fe485658c88d5f0d9a4b24cf8e31a1a12 Mon Sep 17 00:00:00 2001
From: Remi Gau <remi_gau@hotmail.com>
Date: Sun, 16 Jun 2024 10:46:38 +0200
Subject: [PATCH 1/4] [FIX] change name of default branch in CI workflows

---
 .github/workflows/check_md_links.yml | 2 +-
 .github/workflows/pythonpackage.yml  | 2 +-
 .github/workflows/run_precommit.yml  | 2 +-
 .github/workflows/validate_cff.yml   | 2 +-
 4 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/.github/workflows/check_md_links.yml b/.github/workflows/check_md_links.yml
index 6c1482930..b39fa35a6 100644
--- a/.github/workflows/check_md_links.yml
+++ b/.github/workflows/check_md_links.yml
@@ -10,7 +10,7 @@ concurrency:
 on:
   push:
     branches:
-    - master
+    - main
   pull_request:
     branches: ['*']
 
diff --git a/.github/workflows/pythonpackage.yml b/.github/workflows/pythonpackage.yml
index a769b9c24..676a7d44c 100644
--- a/.github/workflows/pythonpackage.yml
+++ b/.github/workflows/pythonpackage.yml
@@ -5,7 +5,7 @@ name: Python package
 
 on:
   push:
-    branches: [ master ]
+    branches: [ main ]
   pull_request:
     branches: '*'
 
diff --git a/.github/workflows/run_precommit.yml b/.github/workflows/run_precommit.yml
index ac8f85d46..e8b3e0de4 100644
--- a/.github/workflows/run_precommit.yml
+++ b/.github/workflows/run_precommit.yml
@@ -4,7 +4,7 @@ name: pre-commit
 on:
     pull_request:
     push:
-        branches: [master]
+        branches: [main]
 
 jobs:
     pre-commit:
diff --git a/.github/workflows/validate_cff.yml b/.github/workflows/validate_cff.yml
index b16edd863..cedfdbb7b 100644
--- a/.github/workflows/validate_cff.yml
+++ b/.github/workflows/validate_cff.yml
@@ -4,7 +4,7 @@ name: validation CITATION.cff
 on:
   pull_request:
   push:
-    branches: [master]
+    branches: [main]
 
 concurrency:
   group: ${{ github.workflow }}-${{ github.ref }}

From c13621d50fec2d77232659c09f03862ee70d50c0 Mon Sep 17 00:00:00 2001
From: Remi Gau <remi_gau@hotmail.com>
Date: Sun, 16 Jun 2024 10:48:51 +0200
Subject: [PATCH 2/4] forgot one

---
 .github/workflows/publishdocs.yaml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/publishdocs.yaml b/.github/workflows/publishdocs.yaml
index 5586266f9..45459add2 100644
--- a/.github/workflows/publishdocs.yaml
+++ b/.github/workflows/publishdocs.yaml
@@ -2,14 +2,14 @@ name: Publish docs via GitHub Pages
 on:
   push:
     branches:
-      - master
+      - main
 
 jobs:
   build:
     name: Deploy docs
     runs-on: ubuntu-latest
     steps:
-      - name: Checkout master
+      - name: Checkout
         uses: actions/checkout@v4
 
       - name: Deploy docs

From 9de8f780f8eefed5b8efc78dad82bcca092560c2 Mon Sep 17 00:00:00 2001
From: Remi Gau <remi_gau@hotmail.com>
Date: Sun, 16 Jun 2024 10:51:03 +0200
Subject: [PATCH 3/4] apply pre-commit

---
 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/README.md b/README.md
index 30b15d31f..50b5195ad 100644
--- a/README.md
+++ b/README.md
@@ -3,7 +3,7 @@
 
 <img src="docs/img/reproschema_logo.png" width="100px" />
 
-# ReproSchema: Enhancing Research Reproducibility through Standardized Survey Data Collection 
+# ReproSchema: Enhancing Research Reproducibility through Standardized Survey Data Collection
 
 The ReproSchema project integrates five key components designed to standardize research protocols and enhance consistency across various stages of data collection.
 - Foundational Schema ([reproschema](https://github.com/ReproNim/reproschema)): This core schema delineates the content and relationships of protocols, assessments, and items to ensure consistency and facilitate data harmonization across studies.

From 0b328bae822763350978ac3e7e9b9dd3bcc2ca5b Mon Sep 17 00:00:00 2001
From: Remi Gau <remi_gau@hotmail.com>
Date: Sun, 16 Jun 2024 10:52:13 +0200
Subject: [PATCH 4/4] fix link

---
 docs/project-structure.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/docs/project-structure.md b/docs/project-structure.md
index 5f3708f0e..dba9f337c 100644
--- a/docs/project-structure.md
+++ b/docs/project-structure.md
@@ -31,7 +31,7 @@ The ReproSchema is like a blueprint for research projects, ensuring everyone col
     -   **Activity Level:** At this stage, an entire survey or tool, made up of many items, is grouped together as an "Activity." It gives a complete overview of what the survey involves.
     -   **Protocols Level:** The highest level, a "Protocol," bundles together all the activities a participant will do in a study, providing a comprehensive plan.
 
--   **[Validation](https://github.com/ReproNim/reproschema/tree/master/validation):** The schema uses special standards (like SHACL files) to make sure the data and forms are up to standard and consistent.
+-   **[Validation](https://github.com/ReproNim/reproschema/tree/main/validation):** The schema uses special standards (like SHACL files) to make sure the data and forms are up to standard and consistent.
 
 -   **Context Files:** These files ([`contexts`](https://github.com/ReproNim/reproschema/tree/master/contexts)and [`terms`](https://github.com/ReproNim/reproschema/tree/master/terms)) specify user-interface details and enhance schema flexibility. They define elements like input types, visibility conditions, and response options, supporting a tailored user experience. Additionally, they enable internationalization and multiple language support for broad applicability.