From 9f0c60b98d7e960381849472e2f616aada680448 Mon Sep 17 00:00:00 2001 From: Nathan Gaddis Date: Thu, 31 Oct 2024 18:48:28 +0000 Subject: [PATCH] Fixed bug in entrypoint_export --- t1dgrs2_pipeline/v2.0/Dockerfile | 1 + t1dgrs2_pipeline/v2.0/pipeline_config/entrypoint_export.json | 1 + t1dgrs2_pipeline/v2.0/pipeline_config/t1dgrs2_tasks.json | 3 +++ 3 files changed, 5 insertions(+) diff --git a/t1dgrs2_pipeline/v2.0/Dockerfile b/t1dgrs2_pipeline/v2.0/Dockerfile index 61730d1..9e54050 100644 --- a/t1dgrs2_pipeline/v2.0/Dockerfile +++ b/t1dgrs2_pipeline/v2.0/Dockerfile @@ -83,3 +83,4 @@ WORKDIR /data RUN chown -R docker:staff /data ENTRYPOINT [ "/opt/entrypoint.sh" ] + diff --git a/t1dgrs2_pipeline/v2.0/pipeline_config/entrypoint_export.json b/t1dgrs2_pipeline/v2.0/pipeline_config/entrypoint_export.json index ed4fa4b..b75dc95 100644 --- a/t1dgrs2_pipeline/v2.0/pipeline_config/entrypoint_export.json +++ b/t1dgrs2_pipeline/v2.0/pipeline_config/entrypoint_export.json @@ -40,6 +40,7 @@ }, "entry_point": "sftp_results", "entry_point_inputs": { + "output_dir": "", "sftp_server": "", "username": "", "password": "", diff --git a/t1dgrs2_pipeline/v2.0/pipeline_config/t1dgrs2_tasks.json b/t1dgrs2_pipeline/v2.0/pipeline_config/t1dgrs2_tasks.json index 04ac930..554431a 100644 --- a/t1dgrs2_pipeline/v2.0/pipeline_config/t1dgrs2_tasks.json +++ b/t1dgrs2_pipeline/v2.0/pipeline_config/t1dgrs2_tasks.json @@ -479,6 +479,9 @@ }, "sftp_results": { "inputs": { + "output_dir": { + "type": "dir" + }, "sftp_server": { "type": "str" },