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add flag for the extension in the write function #119

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zargham-ahmad opened this issue Mar 21, 2024 · 0 comments

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zargham-ahmad commented Mar 21, 2024

          I haven't really changed the command much as It is a bit tricky because the writer expects the filename with an extension, so I can't pass the tool output directly to it. Also cannot use the from_work_dir because we have multiple extensions.

Originally posted by @zargham-ahmad in RECETOX/galaxytools#504 (comment)

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