Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Very slow loading when many studies in the DICOM database #21

Open
pieper opened this issue Aug 6, 2023 · 3 comments
Open

Very slow loading when many studies in the DICOM database #21

pieper opened this issue Aug 6, 2023 · 3 comments

Comments

@pieper
Copy link
Member

pieper commented Aug 6, 2023

I downloaded all the studies from IDC with the PET modality (about 1700 studies) and loaded them into the Slicer dicom database. I installed the PET DICOM extensions in Slicer 5.0.3-2023-08-03.

I'm able to examine the series and see that the PET SUV Plugin correctly identifies that the PET series and is selected to load, but when I try to load it appears that Slicer is in an infinite loop, or at least something very very slow.

If I export the same study from the database to a directory by itself, and then import that directory into a newly created database the study loads quickly. I take this to mean that the plugin is looping over all studies in the database or something similarly inefficient.

@pieper
Copy link
Member Author

pieper commented Aug 6, 2023

FYI @fedorov

@fedorov
Copy link
Member

fedorov commented Aug 7, 2023

I am afraid I don't have any relevant experience to share. I have not used the PET module or this plugin probably since the end of the QIICR project.

@pieper
Copy link
Member Author

pieper commented Dec 8, 2023

This is probably a core slicer issue with tag cache performance and nothing specific to the PET/DICOM extension.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants