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1442 add LocalNet #1447

Merged
merged 37 commits into from
Jan 15, 2021
Merged

1442 add LocalNet #1447

merged 37 commits into from
Jan 15, 2021

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kate-sann5100
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@kate-sann5100 kate-sann5100 commented Jan 13, 2021 •
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Fixes #1442 .

Description

Add LocalNet.

Status

Ready/Work in progress/Hold

Types of changes

  • Non-breaking change (fix or new feature that would not break existing functionality).
  • Breaking change (fix or new feature that would cause existing functionality to change).
  • New tests added to cover the changes.
  • Integration tests passed locally by running ./runtests.sh --codeformat --coverage.
  • Quick tests passed locally by running ./runtests.sh --quick.
  • In-line docstrings updated.
  • Documentation updated, tested make html command in the docs/ folder.

kate-sann5100 and others added 30 commits January 6, 2021 21:15
@kate-sann5100
Merge remote-tracking branch 'Project-MONAI/master'
7579659
@kate-sann5100
1412 add local normalized cross correlation
ce61c38 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1412 add unit test and documentation
5cf91d0 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1412 fix bug
9376195 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1412 reformat code
ac36a9f 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1412 debug type check
ed6c28b 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1412 use separable filter for speed
43c2f35 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
Merge branch 'master' into 1412-local-normalized-cross-correlation
9cc4438
@kate-sann5100
1412 update Union import route
f76e3f0 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1412 fix negative bug and add smooth_nr
50940c2 
Signed-off-by: kate-sann5100 <[email protected]>
@wyli
remove temp. code
cab9b0b 
Signed-off-by: Wenqi Li <[email protected]>
@kate-sann5100
1412 reformat code
6db2528 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
Merge remote-tracking branch 'origin/1412-local-normalized-cross-corr…
a3dd503 
…elation' into 1412-local-normalized-cross-correlation
@kate-sann5100
1412 remove redundant import
af4cab5 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
Merge remote-tracking branch 'Project-MONAI/master'
c3b21c2
@kate-sann5100
Merge branch '1412-local-normalized-cross-correlation'
46124da
@kate-sann5100
Merge remote-tracking branch 'Project-MONAI/master'
a74e61c
@kate-sann5100
Merge remote-tracking branch 'Project-MONAI/master' into 1442-localnet
0396f20
@kate-sann5100
1442 add localnet
8cc4f88 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 add test
3455ee8 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 add documentation
16011d7 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 add typing
a99782b 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
Merge remote-tracking branch 'Project-MONAI/master' into 1442-localnet
ca5baa2
@kate-sann5100
1442 reformat
3772414 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 reformat
c2373e9 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 reformat
99b3fac 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 reformat
9437fb3 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 reformat
7ef82c5 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 reformat
c510806 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 reformat
61691e5 
Signed-off-by: kate-sann5100 <[email protected]>
kate-sann5100 and others added 6 commits January 14, 2021 15:20
@kate-sann5100
1442 reformat
1399f68 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 reformat
6329035 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 reformat
6e8b60e 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 reformat
c51d597 
Signed-off-by: kate-sann5100 <[email protected]>
@kate-sann5100
1442 remove initializsation
2f18619 
Signed-off-by: kate-sann5100 <[email protected]>
@wyli
Merge branch 'master' into 1442-localnet
7bc6e51
@wyli wyli closed this Jan 14, 2021
@wyli
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wyli commented Jan 14, 2021

/black

@wyli wyli reopened this Jan 14, 2021
wyli
wyli reviewed Jan 14, 2021
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thank you! please update the factory calls, the rest looks good to me.

monai/networks/blocks/localnet_block.py Outdated Show resolved Hide resolved
@kate-sann5100
1442 update factory calls
786eb07 
Signed-off-by: kate-sann5100 <[email protected]>
@wyli wyli merged commit e115d6c into Project-MONAI:master Jan 15, 2021
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@wyli wyli wyli approved these changes

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Add LocalNet
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