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The linearfilter documentation should specify which value of alpha does what #160

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tpoisot opened this issue Apr 7, 2020 · 1 comment

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@tpoisot
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tpoisot commented Apr 7, 2020

"""
linearfilter(N::BinaryNetwork, α::Vector{Float64}=[0.25, 0.25, 0.25, 0.25])
Given a network `N` compute the linear filter scores according to Stock et al.
(2017). High scores for negative interactions indicate potential false negative
or missing interactions. Though this it returned as a probabilistic network,
score do not necessary convey a probabilistic interpretation.
#### References
Stock, M., Pahikkala, T., Airola, A., Waegeman, W., Baets, B.D., 2018. Algebraic
Shortcuts for Leave-One-Out Cross-Validation in Supervised Network Inference.
bioRxiv 242321. https://doi.org/10.1101/242321
Stock, M., Poisot, T., Waegeman, W., Baets, B.D., 2017. Linear filtering reveals
false negatives in species interaction data. Scientific Reports 7, 45908.
https://doi.org/10.1038/srep45908
"""

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tpoisot commented Mar 5, 2021

Done

@tpoisot tpoisot closed this as completed Mar 5, 2021
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