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Workflow to convert a PhysiCell model's results (/output) to a Simularium file that can be uploaded and viewed at https://simularium.allencell.org/viewer

You will need to pip install simulariumio[physicell] (we assume you've already installed the Anaconda Python 3.x distribution).

Finally, from the directory of your model's output files:

python convert_to_simularium.py    # you want to customize this script for your data

This will generate a Simularium file which you can upload from https://simularium.allencell.org/viewer