Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Consider spectrally-matched interpolation #1121

Open
tsalo opened this issue Apr 2, 2024 · 0 comments · May be fixed by #1138
Open

Consider spectrally-matched interpolation #1121

tsalo opened this issue Apr 2, 2024 · 0 comments · May be fixed by #1138
Labels
enhancement New feature or request

Comments

@tsalo
Copy link
Member

tsalo commented Apr 2, 2024

Summary

We previously used linear interpolation, and now use cubic spline interpolation based on Nilearn, but Power et al. (2012) did their interpolation based on the spectral characteristics of the low-motion data:

In Part III, potentially compromised data were replaced after the multiple regression but prior to frequency filtering. A least-squares spectral decomposition of the uncensored (‘good’) data was performed and this decomposition was used to reconstitute data at censored (‘bad’) timepoints. To compute the frequency content of uncensored data, we applied a least squares spectral analysis adapted for nonuniformly sampled data, as described in Mathias et al. (2004),usinga method based on the Lomb-Scargle periodogram (Lomb, 1976).

I just wonder if it could help with the interpolation+temporal filtering issue we see.

@tsalo tsalo added the enhancement New feature or request label Apr 2, 2024
@tsalo tsalo linked a pull request Apr 15, 2024 that will close this issue
@tsalo tsalo changed the title Consider Lomb-Scargle-based interpolation Consider spectrally-matched interpolation Apr 16, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

Successfully merging a pull request may close this issue.

1 participant