From 3998a6306fc3a0d91783de71950dcb19aeea22ce Mon Sep 17 00:00:00 2001 From: Damien Goutte-Gattat Date: Wed, 11 Dec 2024 19:40:57 +0000 Subject: [PATCH] Update config for some taxon-specific life-stages ontologies. The repository where the HsapDv, MmusDv, OlatDv, and PdumDv ontologies (among others) are maintained is undergoing an overhaul that will break the existing PURLs for those ontologies. This commit updates the corresponding configuration file to make the PURLs point to the new location of the latest version of those ontologies. --- config/hsapdv.yml | 5 +++-- config/mmusdv.yml | 5 +++-- config/olatdv.yml | 4 ++-- config/pdumdv.yml | 4 ++-- 4 files changed, 10 insertions(+), 8 deletions(-) diff --git a/config/hsapdv.yml b/config/hsapdv.yml index bcb460ad..8806cc0e 100644 --- a/config/hsapdv.yml +++ b/config/hsapdv.yml @@ -4,8 +4,9 @@ idspace: HsapDv base_url: /obo/hsapdv products: -- hsapdv.owl: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/hsapdv/hsapdv.owl -- hsapdv.obo: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/hsapdv/hsapdv.obo +- hsapdv.owl: https://github.com/obophenotype/developmental-stage-ontologies/releases/latest/download/hsapdv.owl +- hsapdv.obo: https://github.com/obophenotype/developmental-stage-ontologies/releases/latest/download/hsapdv.obo +- hsapdv.json: https://github.com/obophenotype/developmental-stage-ontologies/releases/latest/download/hsapdv.json term_browser: ontobee example_terms: diff --git a/config/mmusdv.yml b/config/mmusdv.yml index 2ffb28be..2a5fe9f5 100644 --- a/config/mmusdv.yml +++ b/config/mmusdv.yml @@ -4,8 +4,9 @@ idspace: MmusDv base_url: /obo/mmusdv products: -- mmusdv.owl: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/mmusdv/mmusdv.owl -- mmusdv.obo: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/mmusdv/mmusdv.obo +- mmusdv.owl: https://github.com/obophenotype/developmental-stage-ontologies/releases/latest/download/mmusdv.owl +- mmusdv.obo: https://github.com/obophenotype/developmental-stage-ontologies/releases/latest/download/mmusdv.obo +- mmusdv.json: https://github.com/obophenotype/developmental-stage-ontologies/releases/latest/download/mmusdv.json term_browser: ontobee example_terms: diff --git a/config/olatdv.yml b/config/olatdv.yml index 1412f3e9..0703fa3a 100644 --- a/config/olatdv.yml +++ b/config/olatdv.yml @@ -4,8 +4,8 @@ idspace: OlatDv base_url: /obo/olatdv products: -- olatdv.owl: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/olatdv/olatdv.owl -- olatdv.obo: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/olatdv/olatdv.obo +- olatdv.owl: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/ontology/components/olatdv.owl +- olatdv.obo: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/ontology/components/olatdv.obo term_browser: ontobee example_terms: diff --git a/config/pdumdv.yml b/config/pdumdv.yml index 6d358e9d..f1e28e2c 100644 --- a/config/pdumdv.yml +++ b/config/pdumdv.yml @@ -4,8 +4,8 @@ idspace: PdumDv base_url: /obo/pdumdv products: -- pdumdv.owl: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/pdumdv/pdumdv.owl -- pdumdv.obo: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/pdumdv/pdumdv.obo +- pdumdv.owl: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/ontology/components/pdumdv.owl +- pdumdv.obo: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/ontology/components/pdumdv.obo term_browser: ontobee example_terms: