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Update the license related part
Update license section required by Drew
Correct the link for the OpenJDK.
Updated Preparing MSFragger (markdown)
Updated Frequently Asked Questions (markdown)
Fix link
Update compatibility table link
Fix a dead link.
Fix issue https://github.com/Nesvilab/MSFragger/issues/166
Add schema disclaimer
Link to compatibility image instead of markdown table
Updated Setting the Parameters (markdown)
Add custom enzyme tip
Update download link.
Update academic downloading.
Fix typo, update pepXML schema link
Add tsv column descriptions
Update the default value of write_calibrated_mgf
Add a FAQ about pepindex file.
Update msfragger upgrader URL.
Add PD node powershell unblock
Delete preparing input files page.
Add input file compatibility
Add link to fragpipe
Created Preparing Input Files (markdown)
Updated _Sidebar (markdown)