From ddf627a24a1303bb5300705ae5d5fc5e043bba38 Mon Sep 17 00:00:00 2001 From: Ashastry2 Date: Tue, 13 Jul 2021 09:54:22 -0400 Subject: [PATCH] Updating vcfR to prevent recent failures with vcf to dataframe --- docker/Dockerfile | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/docker/Dockerfile b/docker/Dockerfile index 9e2b003..64f4a9a 100644 --- a/docker/Dockerfile +++ b/docker/Dockerfile @@ -12,4 +12,5 @@ RUN cd / && git clone --single-branch --branch development https://github.com/NC RUN wget https://github.com/jgm/pandoc/releases/download/2.9.2/pandoc-2.9.2-1-amd64.deb \ && dpkg -i pandoc-2.9.2-1-amd64.deb -RUN Rscript -e 'install.packages("gridExtra")' \ No newline at end of file +RUN Rscript -e 'install.packages("gridExtra")' +RUN Rscript -e 'install.packages("https://cran.r-project.org/src/contrib/vcfR_1.12.0.tar.gz", repos=NULL, type="source")'