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scRNAseq_HISAT_example1_screen.txt
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scRNAseq_HISAT_example1_screen.txt
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#Fastq_screen version: 0.14.0 #Aligner: bowtie2 #Reads in subset: 100000
Genome #Reads_processed #Unmapped %Unmapped #One_hit_one_genome %One_hit_one_genome #Multiple_hits_one_genome %Multiple_hits_one_genome #One_hit_multiple_genomes %One_hit_multiple_genomes Multiple_hits_multiple_genomes %Multiple_hits_multiple_genomes
Cat 23 21 91.30 0 0.00 0 0.00 1 4.35 1 4.35
Chicken 23 22 95.65 0 0.00 0 0.00 0 0.00 1 4.35
Cow 23 21 91.30 0 0.00 0 0.00 1 4.35 1 4.35
Drosophila 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Human 23 20 86.95 0 0.00 0 0.00 1 4.35 2 8.70
Mouse 23 0 0.00 5 21.74 4 17.39 4 17.39 10 43.48
Opossum 23 21 91.30 0 0.00 0 0.00 1 4.35 1 4.35
Pig 23 20 86.95 0 0.00 0 0.00 2 8.70 1 4.35
Rat 23 10 43.48 0 0.00 0 0.00 6 26.09 7 30.43
Zebrafish 23 22 95.65 0 0.00 0 0.00 0 0.00 1 4.35
Arabidopsis 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Grape 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Potato 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Tomato 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Adapters 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Brachybacterium 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Pseudomonas 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Massilia_oculi 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Ecoli 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Lambda 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
MT 23 22 95.65 0 0.00 0 0.00 1 4.35 0 0.00
PhiX 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
rRNA 23 22 95.65 0 0.00 0 0.00 0 0.00 1 4.35
Wasp 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Vectors 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Worm 23 22 95.65 0 0.00 0 0.00 0 0.00 1 4.35
Yeast 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
Mycoplasma 23 23 100.00 0 0.00 0 0.00 0 0.00 0 0.00
%Hit_no_genomes: 0.00