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For any training there is exactly one batch of data (size 500'000) that produces exactly 544 NaNs in the predicted distribution.
The distribution is a doubly-censored normal.
The actual loss, on the other hand is never NaN
Other infos
No Nans in the validation set or in the training set
After reviewing the features set that we have, it seems that we have Inf or -Inf values in some of our variables.
The cause could be that Dataset.drop_nans only checks for the presence of NaNs and not infinite values.
I'll propose a fix
For any training there is exactly one batch of data (size 500'000) that produces exactly 544 NaNs in the predicted distribution.
The distribution is a doubly-censored normal.
The actual loss, on the other hand is never NaN
Other infos
Base file
features: - ch1:cloud_area_fraction_ensavg - ch1:cloud_area_fraction_ensstd - ch2:air_temperature_ensavg - ch2:cloud_area_fraction_ensavg - ch2:cloud_area_fraction_ensstd - ifs:air_temperature_ensavg - ifs:cloud_area_fraction_ensavg - ifs:cloud_area_fraction_ensstd - terrain:distance_to_alpine_ridge - terrain:valley_norm_2000m - time:cos_dayofyear - time:cos_hourofday - time:sin_dayofyear - time:sin_hourofdaynormalizer:
fillvalue: -5
default: Standardizer
targets:
sample_weights:
data_partitioning:
time_split:
train:
- 2020-02
- 2020-03
- 2020-05
- 2020-06
- 2020-07
- 2020-08
- 2020-09
- 2020-10
- 2020-11
- 2020-12
- 2021-02
- 2021-03
- 2021-04
- 2021-05
- 2021-06
- 2021-07
- 2021-08
- 2021-09
- 2021-11
- 2021-12
- 2022-01
- 2022-02
- 2022-03
- 2022-04
- 2022-05
- 2022-06
- 2022-08
- 2022-09
- 2020-10
- 2022-11
- 2022-12
- 2023-01
val:
- 2020-04
- 2021-01
- 2021-10
- 2022-07
test:
start: "2023-02-01"
end: "2023-09-30"
station_split:
train: 0.85
val: 0.15
seed: 42
time_dim_name: forecast_reference_time
batching:
event_dims: []
batch_size: 500_000
shuffle: True
model:
fully_connected_network:
hidden_layers: [512, 512, 512]
activations: relu
dropout: [0.3, 0.2, 0.1]
probabilistic_layer: IndependentDoublyCensoredNormal
mc_dropout: True
optimizer:
Adam:
learning_rate:
CosineDecayRestarts:
initial_learning_rate: 0.001
first_decay_steps: 20
t_mul: 2.0
m_mul: 1.025
alpha: 0.0
beta_1: 0.94
loss:
WeightedCRPSEnergy:
threshold: 0.0
n_samples: 100
epochs: 4
steps_per_epoch: 1
metrics:
threshold: 0.25
callbacks:
monitor: val_loss
mode: min
patience: 20
restore_best_weights: True
verbose: 1
min_delta: 0.000050000
thresholds: [0.9]
Env
Environment
absl-py==2.1.0 aiohappyeyeballs @ file:///home/conda/feedstock_root/build_artifacts/aiohappyeyeballs_1724167852130/work aiohttp @ file:///home/conda/feedstock_root/build_artifacts/aiohttp_1727281375658/work aiosignal @ file:///home/conda/feedstock_root/build_artifacts/aiosignal_1667935791922/work alembic @ file:///home/conda/feedstock_root/build_artifacts/alembic_1727122811080/work aniso8601 @ file:///home/conda/feedstock_root/build_artifacts/aniso8601_1618789466884/work asciitree==0.3.3 asttokens @ file:///home/conda/feedstock_root/build_artifacts/asttokens_1698341106958/work astunparse==1.6.3 async-timeout @ file:///home/conda/feedstock_root/build_artifacts/async-timeout_1691763562544/work attrs @ file:///home/conda/feedstock_root/build_artifacts/attrs_1722977137225/work bcrypt @ file:///home/conda/feedstock_root/build_artifacts/bcrypt_1724960420580/work blinker @ file:///home/conda/feedstock_root/build_artifacts/blinker_1715091184126/work bokeh @ file:///home/conda/feedstock_root/build_artifacts/bokeh_1719324651922/work boto3 @ file:///home/conda/feedstock_root/build_artifacts/boto3_1727422381215/work botocore @ file:///home/conda/feedstock_root/build_artifacts/botocore_1727397771150/work Brotli @ file:///home/conda/feedstock_root/build_artifacts/brotli-split_1725267488082/work cachetools @ file:///home/conda/feedstock_root/build_artifacts/cachetools_1724028158384/work certifi @ file:///home/conda/feedstock_root/build_artifacts/certifi_1725278078093/work/certifi cffi @ file:///home/conda/feedstock_root/build_artifacts/cffi_1725571112467/work cftime @ file:///home/conda/feedstock_root/build_artifacts/cftime_1725400455427/work charset-normalizer @ file:///home/conda/feedstock_root/build_artifacts/charset-normalizer_1698833585322/work click @ file:///home/conda/feedstock_root/build_artifacts/click_1692311806742/work cloudpickle @ file:///home/conda/feedstock_root/build_artifacts/cloudpickle_1697464713350/work contourpy @ file:///home/conda/feedstock_root/build_artifacts/contourpy_1727293517607/work cryptography @ file:///home/conda/feedstock_root/build_artifacts/cryptography-split_1725443044072/work cycler @ file:///home/conda/feedstock_root/build_artifacts/cycler_1696677705766/work cytoolz @ file:///home/conda/feedstock_root/build_artifacts/cytoolz_1706897086113/work dask==2022.12.1 dask-expr @ file:///home/conda/feedstock_root/build_artifacts/dask-expr_1722982607046/work databricks-sdk @ file:///home/conda/feedstock_root/build_artifacts/databricks-sdk_1726835227694/work decorator @ file:///home/conda/feedstock_root/build_artifacts/decorator_1641555617451/work Deprecated @ file:///home/conda/feedstock_root/build_artifacts/deprecated_1685233314779/work distributed @ file:///home/conda/feedstock_root/build_artifacts/distributed_1722982528621/work dm-tree==0.1.8 docker @ file:///home/conda/feedstock_root/build_artifacts/docker-py_1716508870406/work entrypoints @ file:///home/conda/feedstock_root/build_artifacts/entrypoints_1643888246732/work exceptiongroup @ file:///home/conda/feedstock_root/build_artifacts/exceptiongroup_1720869315914/work executing @ file:///home/conda/feedstock_root/build_artifacts/executing_1725214404607/work fasteners @ file:///home/conda/feedstock_root/build_artifacts/fasteners_1643971550063/work Flask @ file:///home/conda/feedstock_root/build_artifacts/flask_1712667726126/work flatbuffers==24.3.25 fonttools @ file:///home/conda/feedstock_root/build_artifacts/fonttools_1727206408738/work frozenlist @ file:///home/conda/feedstock_root/build_artifacts/frozenlist_1725395644230/work fsspec @ file:///home/conda/feedstock_root/build_artifacts/fsspec_1725543257300/work gast==0.4.0 gitdb @ file:///home/conda/feedstock_root/build_artifacts/gitdb_1697791558612/work GitPython @ file:///home/conda/feedstock_root/build_artifacts/gitpython_1711991025291/work google-auth @ file:///home/conda/feedstock_root/build_artifacts/google-auth_1726832896641/work google-auth-oauthlib==1.0.0 google-pasta==0.2.0 graphene @ file:///home/conda/feedstock_root/build_artifacts/graphene_1690379572063/work graphql-core @ file:///home/conda/feedstock_root/build_artifacts/graphql-core_1725549136655/work graphql-relay @ file:///home/conda/feedstock_root/build_artifacts/graphql-relay_1650134628625/work greenlet @ file:///home/conda/feedstock_root/build_artifacts/greenlet_1726922189413/work grpcio==1.66.1 gunicorn @ file:///home/conda/feedstock_root/build_artifacts/gunicorn_1713358040599/work h5py==3.12.1 idna @ file:///home/conda/feedstock_root/build_artifacts/idna_1726459485162/work importlib_metadata @ file:///home/conda/feedstock_root/build_artifacts/importlib-metadata_1726082825846/work importlib_resources @ file:///home/conda/feedstock_root/build_artifacts/importlib_resources_1725921340658/work ipython @ file:///home/conda/feedstock_root/build_artifacts/ipython_1701831663892/work itsdangerous @ file:///home/conda/feedstock_root/build_artifacts/itsdangerous_1713372668944/work jax==0.4.30 jaxlib==0.4.30 jedi @ file:///home/conda/feedstock_root/build_artifacts/jedi_1696326070614/work Jinja2 @ file:///home/conda/feedstock_root/build_artifacts/jinja2_1715127149914/work jmespath @ file:///home/conda/feedstock_root/build_artifacts/jmespath_1655568249366/work joblib @ file:///home/conda/feedstock_root/build_artifacts/joblib_1714665484399/work keras==2.12.0 kiwisolver @ file:///home/conda/feedstock_root/build_artifacts/kiwisolver_1725459266648/work libclang==18.1.1 llvmlite==0.43.0 locket @ file:///home/conda/feedstock_root/build_artifacts/locket_1650660393415/work lz4 @ file:///home/conda/feedstock_root/build_artifacts/lz4_1725089417274/work Mako @ file:///home/conda/feedstock_root/build_artifacts/mako_1715711344987/work Markdown @ file:///home/conda/feedstock_root/build_artifacts/markdown_1710435156458/work MarkupSafe @ file:///home/conda/feedstock_root/build_artifacts/markupsafe_1724959465445/work matplotlib==3.9.2 matplotlib-inline @ file:///home/conda/feedstock_root/build_artifacts/matplotlib-inline_1713250518406/work ml_dtypes==0.5.0 mlflow @ file:///home/conda/feedstock_root/build_artifacts/mlflow-split_1726566280547/work mlflow-skinny @ file:///home/conda/feedstock_root/build_artifacts/mlflow-split_1726566280547/work mlpp-lib==0.12.2 msgpack @ file:///home/conda/feedstock_root/build_artifacts/msgpack-python_1725975012026/work multidict @ file:///home/conda/feedstock_root/build_artifacts/multidict_1725953652790/work munkres==1.1.4 netCDF4 @ file:///home/conda/feedstock_root/build_artifacts/netcdf4_1725449927647/work numba @ file:///home/conda/feedstock_root/build_artifacts/numba_1718888028049/work numcodecs @ file:///home/conda/feedstock_root/build_artifacts/numcodecs_1715218778254/work numpy==1.24.3 oauthlib==3.2.2 opentelemetry-api @ file:///home/conda/feedstock_root/build_artifacts/opentelemetry-api_1676680662101/work opentelemetry-sdk @ file:///home/conda/feedstock_root/build_artifacts/opentelemetry-sdk_1676709164054/work opentelemetry-semantic-conventions @ file:///home/conda/feedstock_root/build_artifacts/opentelemetry-semantic-conventions_1676680479396/work opt_einsum==3.4.0 packaging @ file:///home/conda/feedstock_root/build_artifacts/packaging_1718189413536/work pandas==1.5.3 paramiko @ file:///home/conda/feedstock_root/build_artifacts/paramiko_1726748051454/work parso @ file:///home/conda/feedstock_root/build_artifacts/parso_1712320355065/work partd @ file:///home/conda/feedstock_root/build_artifacts/partd_1715026491486/work pexpect @ file:///home/conda/feedstock_root/build_artifacts/pexpect_1706113125309/work pickleshare @ file:///home/conda/feedstock_root/build_artifacts/pickleshare_1602536217715/work pillow @ file:///home/conda/feedstock_root/build_artifacts/pillow_1726075067949/work prometheus_client @ file:///home/conda/feedstock_root/build_artifacts/prometheus_client_1726901976720/work prometheus_flask_exporter @ file:///home/conda/feedstock_root/build_artifacts/prometheus_flask_exporter_1720670279306/work prompt_toolkit @ file:///home/conda/feedstock_root/build_artifacts/prompt-toolkit_1727341649933/work properscoring==0.1 protobuf==4.25.3 psutil @ file:///home/conda/feedstock_root/build_artifacts/psutil_1725737916340/work ptyprocess @ file:///home/conda/feedstock_root/build_artifacts/ptyprocess_1609419310487/work/dist/ptyprocess-0.7.0-py2.py3-none-any.whl pure_eval @ file:///home/conda/feedstock_root/build_artifacts/pure_eval_1721585709575/work pyarrow==17.0.0 pyarrow-hotfix @ file:///home/conda/feedstock_root/build_artifacts/pyarrow-hotfix_1700596371886/work pyasn1 @ file:///home/conda/feedstock_root/build_artifacts/pyasn1_1726839225972/work pyasn1_modules @ file:///home/conda/feedstock_root/build_artifacts/pyasn1-modules_1726029546107/work pycparser @ file:///home/conda/feedstock_root/build_artifacts/pycparser_1711811537435/work Pygments @ file:///home/conda/feedstock_root/build_artifacts/pygments_1714846767233/work PyNaCl @ file:///home/conda/feedstock_root/build_artifacts/pynacl_1725739244417/work pyOpenSSL @ file:///home/conda/feedstock_root/build_artifacts/pyopenssl_1722587090966/work pyparsing @ file:///home/conda/feedstock_root/build_artifacts/pyparsing_1724616129934/work PySocks @ file:///home/conda/feedstock_root/build_artifacts/pysocks_1661604839144/work python-dateutil @ file:///home/conda/feedstock_root/build_artifacts/python-dateutil_1709299778482/work pytz @ file:///home/conda/feedstock_root/build_artifacts/pytz_1706886791323/work pyu2f @ file:///home/conda/feedstock_root/build_artifacts/pyu2f_1604248910016/work PyYAML @ file:///home/conda/feedstock_root/build_artifacts/pyyaml_1725456176299/work querystring_parser @ file:///home/conda/feedstock_root/build_artifacts/querystring_parser_1723625595981/work requests @ file:///home/conda/feedstock_root/build_artifacts/requests_1717057054362/work requests-oauthlib==2.0.0 rsa @ file:///home/conda/feedstock_root/build_artifacts/rsa_1658328885051/work s3transfer @ file:///home/conda/feedstock_root/build_artifacts/s3transfer_1719300139436/work scikit-learn @ file:///home/conda/feedstock_root/build_artifacts/scikit-learn_1726082655509/work/dist/scikit_learn-1.5.2-cp39-cp39-linux_x86_64.whl#sha256=9bdea44be238844ca955b35fde2df3049752a843e3eb223cf91e68e25efefa5c scipy @ file:///home/conda/feedstock_root/build_artifacts/scipy-split_1716470218293/work/dist/scipy-1.13.1-cp39-cp39-linux_x86_64.whl#sha256=e6696cb8683d94467891b7648e068a3970f6bc0a1b3c1aa7f9bc89458eafd2f0 six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work smmap @ file:///home/conda/feedstock_root/build_artifacts/smmap_1634310307496/work sortedcontainers @ file:///home/conda/feedstock_root/build_artifacts/sortedcontainers_1621217038088/work SQLAlchemy @ file:///home/conda/feedstock_root/build_artifacts/sqlalchemy_1726596200000/work sqlparse @ file:///home/conda/feedstock_root/build_artifacts/sqlparse_1721304206023/work stack-data @ file:///home/conda/feedstock_root/build_artifacts/stack_data_1669632077133/work tblib @ file:///home/conda/feedstock_root/build_artifacts/tblib_1702066284995/work tensorboard==2.12.3 tensorboard-data-server==0.7.2 tensorflow==2.12.1 tensorflow-estimator==2.12.0 tensorflow-io-gcs-filesystem==0.37.1 tensorflow-probability==0.20.1 termcolor==2.4.0 threadpoolctl @ file:///home/conda/feedstock_root/build_artifacts/threadpoolctl_1714400101435/work toolz @ file:///home/conda/feedstock_root/build_artifacts/toolz_1706112571092/work tornado @ file:///home/conda/feedstock_root/build_artifacts/tornado_1724955920300/work traitlets @ file:///home/conda/feedstock_root/build_artifacts/traitlets_1713535121073/work typing_extensions==4.5.0 tzdata @ file:///home/conda/feedstock_root/build_artifacts/python-tzdata_1727140567071/work unicodedata2 @ file:///home/conda/feedstock_root/build_artifacts/unicodedata2_1695847984941/work urllib3 @ file:///home/conda/feedstock_root/build_artifacts/urllib3_1718728347128/work wcwidth @ file:///home/conda/feedstock_root/build_artifacts/wcwidth_1704731205417/work websocket-client @ file:///home/conda/feedstock_root/build_artifacts/websocket-client_1713923384721/work Werkzeug @ file:///home/conda/feedstock_root/build_artifacts/werkzeug_1724330738730/work wrapt==1.14.1 xarray==2022.12.0 xyzservices @ file:///home/conda/feedstock_root/build_artifacts/xyzservices_1725366347586/work yarl @ file:///home/conda/feedstock_root/build_artifacts/yarl_1727422848961/work zarr @ file:///home/conda/feedstock_root/build_artifacts/zarr_1716779724722/work zict @ file:///home/conda/feedstock_root/build_artifacts/zict_1681770155528/work zipp @ file:///home/conda/feedstock_root/build_artifacts/zipp_1726248574750/workThe text was updated successfully, but these errors were encountered: