From dfae55cdb3d9b2944e78619ffdc43abb118ab669 Mon Sep 17 00:00:00 2001 From: Tyler Reddy Date: Thu, 22 Oct 2015 03:18:03 -0700 Subject: [PATCH] adjusted travis configuration (without netcdflib) - removed netCDF4 and dependencies from travis configuration - fix scipy.io import problem relating to libgfortran Travis CI problem described in Issue MDAnalysis/GridDataFormats#17. --- .travis.yml | 9 ++++----- 1 file changed, 4 insertions(+), 5 deletions(-) diff --git a/.travis.yml b/.travis.yml index b6e10fe3de8..fee56c02bce 100644 --- a/.travis.yml +++ b/.travis.yml @@ -6,8 +6,7 @@ addons: apt: packages: - gfortran - - libhdf5-serial-dev - - libnetcdf-dev + - libgfortran3 - liblapack-dev - libatlas-dev before_install: @@ -17,9 +16,9 @@ before_install: - export PATH=/home/travis/miniconda/bin:$PATH - conda update --yes conda install: - - conda create --yes -q -n pyenv mkl python=2.7 numpy=1.9.1 scipy=0.14.0 nose=1.3.7 sphinx=1.3 + - conda create --yes -q -n pyenv python=2.7 numpy=1.9.2 scipy=0.16.0 nose=1.3.7 sphinx=1.3 - source activate pyenv - - conda install --yes python=$TRAVIS_PYTHON_VERSION cython biopython matplotlib networkx netcdf4 + - conda install --yes python=$TRAVIS_PYTHON_VERSION cython biopython matplotlib networkx - pip install package/ - pip install testsuite/ - pip install coveralls tempdir @@ -49,4 +48,4 @@ env: - GH_REPOSITORY: github.com/MDAnalysis/mdanalysis.git - GIT_CI_USER: TravisCI - GIT_CI_EMAIL: TravisCI@mdanalysis.org - - MDA_DOCDIR: package/doc/html \ No newline at end of file + - MDA_DOCDIR: package/doc/html