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Missing genotypes interpreted as the same. #39

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kcamnairb opened this issue Jul 7, 2022 · 0 comments
Open

Missing genotypes interpreted as the same. #39

kcamnairb opened this issue Jul 7, 2022 · 0 comments

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@kcamnairb
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Hi, I noticed that if the reference genotype and comparison genotype are both missing GCViT will interpret them as the same when displaying the haplotype. I would expect that there would be nothing drawn for that comparison at that locus. I tested this by setting all variants for two samples as missing, and they were displayed as the same for every variant.

Brian

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