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Non-multiplexed Reference Assignment #23

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ZwFink opened this issue Jan 31, 2020 · 1 comment
Open

Non-multiplexed Reference Assignment #23

ZwFink opened this issue Jan 31, 2020 · 1 comment
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demux Related to the 'demux' module enhancement New feature or request low priority Label used for features that are considered low priority and will not be worked on right away.

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@ZwFink
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ZwFink commented Jan 31, 2020

The demux module should still be able to count probe occurrences when processing read data that is not multiplexed. In this mode, forward indexes, reverse indexes, and sample list arguments will not be used. The score for each probe will be written to a Default sample in the output matrix.
@ZwFink ZwFink added the enhancement New feature or request label Jan 31, 2020
@ZwFink ZwFink self-assigned this Jan 31, 2020
@ZwFink ZwFink changed the title Non-Multiplexed Demultiplexing Reference-Independent Demultiplexing Feb 6, 2020
@ZwFink ZwFink added the demux Related to the 'demux' module label Feb 18, 2020
@ZwFink ZwFink changed the title Reference-Independent Demultiplexing Non-multiplexed Reference Assignment Feb 24, 2020
@jtladner jtladner assigned vidalrmartinez and unassigned ZwFink Jun 23, 2020
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This is reference-dependent generation of counts, but assuming that there is just a single sample in the run. Therefore, indexes are not relevant.

@jtladner jtladner added the low priority Label used for features that are considered low priority and will not be worked on right away. label Jul 17, 2023
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demux Related to the 'demux' module enhancement New feature or request low priority Label used for features that are considered low priority and will not be worked on right away.
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@jtladner @Clockwork-Rat @ZwFink @vidalrmartinez