Merge pull request #219 from LadnerLab/deconv-ISS218 #208
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| name: C++ CI | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| logLevel: | |
| description: 'log level' | |
| environment: | |
| tags: | |
| push: | |
| branches: [ develop ] | |
| pull_request: | |
| branches: [ develop ] | |
| jobs: | |
| build: | |
| runs-on: [ ubuntu-latest ] | |
| env: | |
| BOOST_URL: https://boostorg.jfrog.io/artifactory/main/release/1.78.0/source/boost_1_78_0.tar.gz | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: install zlib | |
| run: | |
| sudo apt install zlib1g | |
| - name: install boost package | |
| run: | | |
| sudo apt update | |
| sudo apt install -y libboost-all-dev | |
| - name: setup cmake | |
| uses: jwlawson/[email protected] | |
| with: | |
| cmake-version: '3.16.3' | |
| - name: build pepsirf_test | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake --version | |
| cmake -DCMAKE_BUILD_TYPE=Release .. | |
| make pepsirf_test | |
| - name: run pepsirf_test | |
| run: | | |
| cd build | |
| ./pepsirf_test | |
| cp ../test/test_demux_output.tsv ../ |