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Conflict between EEGLAB and LIMO on session in design matrix #171

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arnodelorme opened this issue Aug 2, 2023 · 4 comments
Open

Conflict between EEGLAB and LIMO on session in design matrix #171

arnodelorme opened this issue Aug 2, 2023 · 4 comments
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@arnodelorme
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When EEGLAB declare that it wants to compare sessions in the STUDY.design, instead of being ignored, it is included in the LIMO design.

@CPernet
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CPernet commented Aug 2, 2023

It is not ignored - if you have two sessions or more, it creates sessions, runs the glm for each one, and computes between sessions contrasts - the reason to do this is because the variance between sessions is not the same as if LIMO was doing one design. ++- not a bug, a feature.

@arnodelorme
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No, it creates a categorical variable for the session (it also creates different files as it should).

@CPernet
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CPernet commented Aug 2, 2023

Do you mean, you have a session variable? Yes it does not deal with that -- and I do not want that (session variance needs to be accounted for)

@arnodelorme
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Let's change the code to remove the session variable from the STUDY design (temporarily) before computing LIMO files.

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