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It is not ignored - if you have two sessions or more, it creates sessions, runs the glm for each one, and computes between sessions contrasts - the reason to do this is because the variance between sessions is not the same as if LIMO was doing one design. ++- not a bug, a feature.
When EEGLAB declare that it wants to compare sessions in the STUDY.design, instead of being ignored, it is included in the LIMO design.
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