diff --git a/tensorboard_plugin_3d/client/package.json b/tensorboard_plugin_3d/client/package.json index 67938a6..68a8755 100644 --- a/tensorboard_plugin_3d/client/package.json +++ b/tensorboard_plugin_3d/client/package.json @@ -28,6 +28,7 @@ "itk-viewer-icons": "^11.11.2", "itk-viewer-material-ui": "https://github.com/InsightSoftwareConsortium/itk-viewer-material-ui", "material-ui": "^0.20.2", + "ndarray-pack": "^1.2.1", "react": "^17.0.2", "react-dom": "^17.0.2" } diff --git a/tensorboard_plugin_3d/client/src/index.js b/tensorboard_plugin_3d/client/src/index.js index 5abe7d0..a6a5c2e 100644 --- a/tensorboard_plugin_3d/client/src/index.js +++ b/tensorboard_plugin_3d/client/src/index.js @@ -1,5 +1,6 @@ import materialUIMachineOptions from 'itk-viewer-material-ui/src/materialUIMachineOptions' import modifiedCreateInterface from './main' +import ndarraypack from 'ndarray-pack' const uiMachineOptions = { ...materialUIMachineOptions } @@ -9,10 +10,42 @@ uiMachineActions.createInterface = modifiedCreateInterface uiMachineOptions.actions = uiMachineActions const container = document.querySelector('.content') -const ipfsImage = new URL("https://data.kitware.com/api/v1/file/564a65d58d777f7522dbfb61/download/data.nrrd") -window.itkVtkViewer.createViewer(container, - { - image: ipfsImage, - rotate: false, - config: { uiMachineOptions }, + +async function fetchJSON(url) { + const response = await fetch(url); + if (!response.ok) { + return null; + } + const data = response.json(); + return data; +} + +function encodeScijsArray(array){ + const encoded = { + _rtype: 'ndarray', + _rdtype: array.dtype, + _rshape: array.shape, + _rvalue: array.data, + } + return encoded +} + +async function createViewer() { + const img_data = await fetchJSON('../images').then(response => { + let image_data = {image: encodeScijsArray(ndarraypack(response.images[0].array))} + if (response.images.length > 1) { + image_data.labelImage = encodeScijsArray(ndarraypack(response.images[1].array)) + } + response.images.forEach((img) => { + encodeScijsArray(ndarraypack(img.array)) + }) + return image_data }) + window.itkVtkViewer.createViewer(container, + { + ...img_data, + rotate: false, + config: { uiMachineOptions }, + }) +} +createViewer() diff --git a/tensorboard_plugin_3d/client/yarn.lock b/tensorboard_plugin_3d/client/yarn.lock index 2082503..8b9d00c 100644 --- a/tensorboard_plugin_3d/client/yarn.lock +++ b/tensorboard_plugin_3d/client/yarn.lock @@ -2,17 +2,17 @@ # yarn lockfile v1 -"@babel/code-frame@^7.16.0": +"@babel/code-frame@^7.0.0", "@babel/code-frame@^7.16.0": version "7.16.0" resolved "https://registry.yarnpkg.com/@babel/code-frame/-/code-frame-7.16.0.tgz#0dfc80309beec8411e65e706461c408b0bb9b431" integrity sha512-IF4EOMEV+bfYwOmNxGzSnjR2EmQod7f1UXOpZM3l4i4o4QNwzjtJAu/HxdjHq0aYBvdqMuQEY1eg0nqW9ZPORA== dependencies: "@babel/highlight" "^7.16.0" -"@babel/compat-data@^7.13.11", "@babel/compat-data@^7.16.0": - version "7.16.0" - resolved "https://registry.yarnpkg.com/@babel/compat-data/-/compat-data-7.16.0.tgz#ea269d7f78deb3a7826c39a4048eecda541ebdaa" - integrity sha512-DGjt2QZse5SGd9nfOSqO4WLJ8NN/oHkijbXbPrxuoJO3oIPJL3TciZs9FX+cOHNiY9E9l0opL8g7BmLe3T+9ew== +"@babel/compat-data@^7.13.11", "@babel/compat-data@^7.16.0", "@babel/compat-data@^7.16.4": + version "7.16.4" + resolved "https://registry.yarnpkg.com/@babel/compat-data/-/compat-data-7.16.4.tgz#081d6bbc336ec5c2435c6346b2ae1fb98b5ac68e" + integrity sha512-1o/jo7D+kC9ZjHX5v+EHrdjl3PhxMrLSOTGsOdHJ+KL8HCaEK6ehrVL2RS6oHDZp+L7xLirLrPmQtEng769J/Q== "@babel/core@^7.14.8": version "7.16.0" @@ -59,7 +59,7 @@ "@babel/helper-explode-assignable-expression" "^7.16.0" "@babel/types" "^7.16.0" -"@babel/helper-compilation-targets@^7.13.0", "@babel/helper-compilation-targets@^7.16.0": +"@babel/helper-compilation-targets@^7.13.0", "@babel/helper-compilation-targets@^7.16.0", "@babel/helper-compilation-targets@^7.16.3": version "7.16.3" resolved "https://registry.yarnpkg.com/@babel/helper-compilation-targets/-/helper-compilation-targets-7.16.3.tgz#5b480cd13f68363df6ec4dc8ac8e2da11363cbf0" integrity sha512-vKsoSQAyBmxS35JUOOt+07cLc6Nk/2ljLIHwmq2/NM6hdioUaqEXq/S+nXvbvXbZkNDlWOymPanJGOc4CBjSJA== @@ -89,10 +89,10 @@ "@babel/helper-annotate-as-pure" "^7.16.0" regexpu-core "^4.7.1" -"@babel/helper-define-polyfill-provider@^0.2.4": - version "0.2.4" - resolved "https://registry.yarnpkg.com/@babel/helper-define-polyfill-provider/-/helper-define-polyfill-provider-0.2.4.tgz#8867aed79d3ea6cade40f801efb7ac5c66916b10" - integrity sha512-OrpPZ97s+aPi6h2n1OXzdhVis1SGSsMU2aMHgLcOKfsp4/v1NWpx3CWT3lBj5eeBq9cDkPkh+YCfdF7O12uNDQ== +"@babel/helper-define-polyfill-provider@^0.3.0": + version "0.3.0" + resolved "https://registry.yarnpkg.com/@babel/helper-define-polyfill-provider/-/helper-define-polyfill-provider-0.3.0.tgz#c5b10cf4b324ff840140bb07e05b8564af2ae971" + integrity sha512-7hfT8lUljl/tM3h+izTX/pO3W3frz2ok6Pk+gzys8iJqDfZrZy2pXjRTZAvG2YmfHun1X4q8/UZRLatMfqc5Tg== dependencies: "@babel/helper-compilation-targets" "^7.13.0" "@babel/helper-module-imports" "^7.12.13" @@ -173,10 +173,10 @@ resolved "https://registry.yarnpkg.com/@babel/helper-plugin-utils/-/helper-plugin-utils-7.14.5.tgz#5ac822ce97eec46741ab70a517971e443a70c5a9" integrity sha512-/37qQCE3K0vvZKwoK4XU/irIJQdIfCJuhU5eKnNxpFDsOkgFaUAwbv+RYw6eYgsC0E4hS7r5KqGULUogqui0fQ== -"@babel/helper-remap-async-to-generator@^7.16.0": - version "7.16.0" - resolved "https://registry.yarnpkg.com/@babel/helper-remap-async-to-generator/-/helper-remap-async-to-generator-7.16.0.tgz#d5aa3b086e13a5fe05238ff40c3a5a0c2dab3ead" - integrity sha512-MLM1IOMe9aQBqMWxcRw8dcb9jlM86NIw7KA0Wri91Xkfied+dE0QuBFSBjMNvqzmS0OSIDsMNC24dBEkPUi7ew== +"@babel/helper-remap-async-to-generator@^7.16.0", "@babel/helper-remap-async-to-generator@^7.16.4": + version "7.16.4" + resolved "https://registry.yarnpkg.com/@babel/helper-remap-async-to-generator/-/helper-remap-async-to-generator-7.16.4.tgz#5d7902f61349ff6b963e07f06a389ce139fbfe6e" + integrity sha512-vGERmmhR+s7eH5Y/cp8PCVzj4XEjerq8jooMfxFdA5xVtAk9Sh4AQsrWgiErUEBjtGrBtOFKDUcWQFW4/dFwMA== dependencies: "@babel/helper-annotate-as-pure" "^7.16.0" "@babel/helper-wrap-function" "^7.16.0" @@ -252,11 +252,11 @@ js-tokens "^4.0.0" "@babel/parser@^7.16.0", "@babel/parser@^7.16.3": - version "7.16.3" - resolved "https://registry.yarnpkg.com/@babel/parser/-/parser-7.16.3.tgz#271bafcb811080905a119222edbc17909c82261d" - integrity sha512-dcNwU1O4sx57ClvLBVFbEgx0UZWfd0JQX5X6fxFRCLHelFBGXFfSz6Y0FAq2PEwUqlqLkdVjVr4VASEOuUnLJw== + version "7.16.4" + resolved "https://registry.yarnpkg.com/@babel/parser/-/parser-7.16.4.tgz#d5f92f57cf2c74ffe9b37981c0e72fee7311372e" + integrity sha512-6V0qdPUaiVHH3RtZeLIsc+6pDhbYzHR8ogA8w+f+Wc77DuXto19g2QUwveINoS34Uw+W8/hQDGJCx+i4n7xcng== -"@babel/plugin-bugfix-safari-id-destructuring-collision-in-function-expression@^7.16.0": +"@babel/plugin-bugfix-safari-id-destructuring-collision-in-function-expression@^7.16.2": version "7.16.2" resolved "https://registry.yarnpkg.com/@babel/plugin-bugfix-safari-id-destructuring-collision-in-function-expression/-/plugin-bugfix-safari-id-destructuring-collision-in-function-expression-7.16.2.tgz#2977fca9b212db153c195674e57cfab807733183" integrity sha512-h37CvpLSf8gb2lIJ2CgC3t+EjFbi0t8qS7LCS1xcJIlEXE4czlofwaW7W1HA8zpgOCzI9C1nmoqNR1zWkk0pQg== @@ -272,13 +272,13 @@ "@babel/helper-skip-transparent-expression-wrappers" "^7.16.0" "@babel/plugin-proposal-optional-chaining" "^7.16.0" -"@babel/plugin-proposal-async-generator-functions@^7.16.0": - version "7.16.0" - resolved "https://registry.yarnpkg.com/@babel/plugin-proposal-async-generator-functions/-/plugin-proposal-async-generator-functions-7.16.0.tgz#11425d47a60364352f668ad5fbc1d6596b2c5caf" - integrity sha512-nyYmIo7ZqKsY6P4lnVmBlxp9B3a96CscbLotlsNuktMHahkDwoPYEjXrZHU0Tj844Z9f1IthVxQln57mhkcExw== +"@babel/plugin-proposal-async-generator-functions@^7.16.4": + version "7.16.4" + resolved "https://registry.yarnpkg.com/@babel/plugin-proposal-async-generator-functions/-/plugin-proposal-async-generator-functions-7.16.4.tgz#e606eb6015fec6fa5978c940f315eae4e300b081" + integrity sha512-/CUekqaAaZCQHleSK/9HajvcD/zdnJiKRiuUFq8ITE+0HsPzquf53cpFiqAwl/UfmJbR6n5uGPQSPdrmKOvHHg== dependencies: "@babel/helper-plugin-utils" "^7.14.5" - "@babel/helper-remap-async-to-generator" "^7.16.0" + "@babel/helper-remap-async-to-generator" "^7.16.4" "@babel/plugin-syntax-async-generators" "^7.8.4" "@babel/plugin-proposal-class-properties@^7.16.0": @@ -442,7 +442,7 @@ dependencies: "@babel/helper-plugin-utils" "^7.8.0" -"@babel/plugin-syntax-jsx@^7.16.0": +"@babel/plugin-syntax-jsx@^7.12.13", "@babel/plugin-syntax-jsx@^7.16.0": version "7.16.0" resolved "https://registry.yarnpkg.com/@babel/plugin-syntax-jsx/-/plugin-syntax-jsx-7.16.0.tgz#f9624394317365a9a88c82358d3f8471154698f1" integrity sha512-8zv2+xiPHwly31RK4RmnEYY5zziuF3O7W2kIDW+07ewWDh6Oi0dRq8kwvulRkFgt6DB97RlKs5c1y068iPlCUg== @@ -674,7 +674,7 @@ "@babel/helper-plugin-utils" "^7.14.5" "@babel/helper-replace-supers" "^7.16.0" -"@babel/plugin-transform-parameters@^7.16.0": +"@babel/plugin-transform-parameters@^7.16.0", "@babel/plugin-transform-parameters@^7.16.3": version "7.16.3" resolved "https://registry.yarnpkg.com/@babel/plugin-transform-parameters/-/plugin-transform-parameters-7.16.3.tgz#fa9e4c874ee5223f891ee6fa8d737f4766d31d15" integrity sha512-3MaDpJrOXT1MZ/WCmkOFo7EtmVVC8H4EUZVrHvFOsmwkk4lOjQj8rzv8JKUZV4YoQKeoIgk07GO+acPU9IMu/w== @@ -787,17 +787,17 @@ "@babel/helper-plugin-utils" "^7.14.5" "@babel/preset-env@^7.16.0": - version "7.16.0" - resolved "https://registry.yarnpkg.com/@babel/preset-env/-/preset-env-7.16.0.tgz#97228393d217560d6a1c6c56f0adb9d12bca67f5" - integrity sha512-cdTu/W0IrviamtnZiTfixPfIncr2M1VqRrkjzZWlr1B4TVYimCFK5jkyOdP4qw2MrlKHi+b3ORj6x8GoCew8Dg== + version "7.16.4" + resolved "https://registry.yarnpkg.com/@babel/preset-env/-/preset-env-7.16.4.tgz#4f6ec33b2a3fe72d6bfdcdf3859500232563a2e3" + integrity sha512-v0QtNd81v/xKj4gNKeuAerQ/azeNn/G1B1qMLeXOcV8+4TWlD2j3NV1u8q29SDFBXx/NBq5kyEAO+0mpRgacjA== dependencies: - "@babel/compat-data" "^7.16.0" - "@babel/helper-compilation-targets" "^7.16.0" + "@babel/compat-data" "^7.16.4" + "@babel/helper-compilation-targets" "^7.16.3" "@babel/helper-plugin-utils" "^7.14.5" "@babel/helper-validator-option" "^7.14.5" - "@babel/plugin-bugfix-safari-id-destructuring-collision-in-function-expression" "^7.16.0" + "@babel/plugin-bugfix-safari-id-destructuring-collision-in-function-expression" "^7.16.2" "@babel/plugin-bugfix-v8-spread-parameters-in-optional-chaining" "^7.16.0" - "@babel/plugin-proposal-async-generator-functions" "^7.16.0" + "@babel/plugin-proposal-async-generator-functions" "^7.16.4" "@babel/plugin-proposal-class-properties" "^7.16.0" "@babel/plugin-proposal-class-static-block" "^7.16.0" "@babel/plugin-proposal-dynamic-import" "^7.16.0" @@ -847,7 +847,7 @@ "@babel/plugin-transform-named-capturing-groups-regex" "^7.16.0" "@babel/plugin-transform-new-target" "^7.16.0" "@babel/plugin-transform-object-super" "^7.16.0" - "@babel/plugin-transform-parameters" "^7.16.0" + "@babel/plugin-transform-parameters" "^7.16.3" "@babel/plugin-transform-property-literals" "^7.16.0" "@babel/plugin-transform-regenerator" "^7.16.0" "@babel/plugin-transform-reserved-words" "^7.16.0" @@ -860,10 +860,10 @@ "@babel/plugin-transform-unicode-regex" "^7.16.0" "@babel/preset-modules" "^0.1.5" "@babel/types" "^7.16.0" - babel-plugin-polyfill-corejs2 "^0.2.3" - babel-plugin-polyfill-corejs3 "^0.3.0" - babel-plugin-polyfill-regenerator "^0.2.3" - core-js-compat "^3.19.0" + babel-plugin-polyfill-corejs2 "^0.3.0" + babel-plugin-polyfill-corejs3 "^0.4.0" + babel-plugin-polyfill-regenerator "^0.3.0" + core-js-compat "^3.19.1" semver "^6.3.0" "@babel/preset-modules@^0.1.5": @@ -896,7 +896,7 @@ dependencies: regenerator-runtime "^0.13.4" -"@babel/runtime@^7.1.2", "@babel/runtime@^7.13.10", "@babel/runtime@^7.2.0", "@babel/runtime@^7.3.1", "@babel/runtime@^7.4.4", "@babel/runtime@^7.5.5", "@babel/runtime@^7.8.3", "@babel/runtime@^7.8.4", "@babel/runtime@^7.8.7": +"@babel/runtime@^7.1.2", "@babel/runtime@^7.13.10", "@babel/runtime@^7.16.3", "@babel/runtime@^7.2.0", "@babel/runtime@^7.5.5", "@babel/runtime@^7.7.2", "@babel/runtime@^7.8.4", "@babel/runtime@^7.8.7": version "7.16.3" resolved "https://registry.yarnpkg.com/@babel/runtime/-/runtime-7.16.3.tgz#b86f0db02a04187a3c17caa77de69840165d42d5" integrity sha512-WBwekcqacdY2e9AF/Q7WLFUWmdJGJTkbjqTjoMDgXkVZ3ZRUvOPsLb5KdwISoQVsbP+DQzVZW4Zhci0DvpbNTQ== @@ -936,15 +936,111 @@ to-fast-properties "^2.0.0" "@discoveryjs/json-ext@^0.5.0": - version "0.5.5" - resolved 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babel-plugin-macros "^2.6.1" + convert-source-map "^1.5.0" + escape-string-regexp "^4.0.0" + find-root "^1.1.0" + source-map "^0.5.7" + stylis "4.0.13" + +"@emotion/cache@^11.6.0", "@emotion/cache@^11.7.1": + version "11.7.1" + resolved "https://registry.yarnpkg.com/@emotion/cache/-/cache-11.7.1.tgz#08d080e396a42e0037848214e8aa7bf879065539" + integrity sha512-r65Zy4Iljb8oyjtLeCuBH8Qjiy107dOYC6SJq7g7GV5UCQWMObY4SJDPGFjiiVpPrOJ2hmJOoBiYTC7hwx9E2A== + dependencies: + "@emotion/memoize" "^0.7.4" + "@emotion/sheet" "^1.1.0" + "@emotion/utils" "^1.0.0" + "@emotion/weak-memoize" "^0.2.5" + stylis "4.0.13" "@emotion/hash@^0.8.0": version "0.8.0" resolved "https://registry.yarnpkg.com/@emotion/hash/-/hash-0.8.0.tgz#bbbff68978fefdbe68ccb533bc8cbe1d1afb5413" integrity sha512-kBJtf7PH6aWwZ6fka3zQ0p6SBYzx4fl1LoZXE2RrnYST9Xljm7WfKJrU4g/Xr3Beg72MLrp1AWNUmuYJTL7Cow== +"@emotion/is-prop-valid@^1.1.1": + version "1.1.1" + resolved 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+ version "3.19.3" + resolved "https://registry.yarnpkg.com/core-js-compat/-/core-js-compat-3.19.3.tgz#de75e5821c5ce924a0a1e7b7d5c2cb973ff388aa" + integrity sha512-59tYzuWgEEVU9r+SRgceIGXSSUn47JknoiXW6Oq7RW8QHjXWz3/vp8pa7dbtuVu40sewz3OP3JmQEcDdztrLhA== dependencies: - browserslist "^4.17.6" + browserslist "^4.18.1" semver "7.0.0" core-js@^1.0.0: @@ -1931,6 +2069,17 @@ core-util-is@~1.0.0: resolved "https://registry.yarnpkg.com/core-util-is/-/core-util-is-1.0.3.tgz#a6042d3634c2b27e9328f837b965fac83808db85" integrity sha512-ZQBvi1DcpJ4GDqanjucZ2Hj3wEO5pZDS89BWbkcrvdxksJorwUDDZamX9ldFkp9aw2lmBDLgkObEA4DWNJ9FYQ== +cosmiconfig@^6.0.0: + version "6.0.0" + resolved "https://registry.yarnpkg.com/cosmiconfig/-/cosmiconfig-6.0.0.tgz#da4fee853c52f6b1e6935f41c1a2fc50bd4a9982" + integrity sha512-xb3ZL6+L8b9JLLCx3ZdoZy4+2ECphCMo2PwqgP1tlfVq6M6YReyzBJtvWWtbDSpNr9hn96pkCiZqUcFEc+54Qg== + dependencies: + "@types/parse-json" "^4.0.0" + import-fresh "^3.1.0" + parse-json "^5.0.0" + path-type "^4.0.0" + 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sha512-w16Dtd2zl7VZ4N4Db+FIa7n36sgPGCKjrKvUUmp5ialsikvcQLjcJR9RWnlYNxIyEHLdHaoIZEqKsPxU9MdyBg== + version "1.4.16" + resolved "https://registry.yarnpkg.com/electron-to-chromium/-/electron-to-chromium-1.4.16.tgz#38ddecc616385e6f101359d1b978c802664157d2" + integrity sha512-BQb7FgYwnu6haWLU63/CdVW+9xhmHls3RCQUFiV4lvw3wimEHTVcUk2hkuZo76QhR8nnDdfZE7evJIZqijwPdA== emoji-regex@^7.0.1: version "7.0.3" @@ -2322,6 +2465,13 @@ errno@^0.1.3: dependencies: prr "~1.0.1" +error-ex@^1.3.1: + version "1.3.2" + resolved "https://registry.yarnpkg.com/error-ex/-/error-ex-1.3.2.tgz#b4ac40648107fdcdcfae242f428bea8a14d4f1bf" + integrity sha512-7dFHNmqeFSEt2ZBsCriorKnn3Z2pj+fd9kmI6QoWw4//DL+icEBfc0U7qJCisqrTsKTjw4fNFy2pW9OqStD84g== + dependencies: + is-arrayish "^0.2.1" + es-module-lexer@^0.9.0: version "0.9.3" resolved "https://registry.yarnpkg.com/es-module-lexer/-/es-module-lexer-0.9.3.tgz#6f13db00cc38417137daf74366f535c8eb438f19" @@ -2342,6 +2492,11 @@ escape-string-regexp@^1.0.5: resolved 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resolved "https://registry.yarnpkg.com/find-up/-/find-up-3.0.0.tgz#49169f1d7993430646da61ecc5ae355c21c97b73" @@ -2607,9 +2767,9 @@ find-yarn-workspace-root@^2.0.0: micromatch "^4.0.2" follow-redirects@^1.0.0: - version "1.14.5" - resolved "https://registry.yarnpkg.com/follow-redirects/-/follow-redirects-1.14.5.tgz#f09a5848981d3c772b5392309778523f8d85c381" - integrity sha512-wtphSXy7d4/OR+MvIFbCVBDzZ5520qV8XfPklSN5QtxuMUJZ+b0Wnst1e1lCDocfzuCkHqj8k0FpZqO+UIaKNA== + version "1.14.6" + resolved "https://registry.yarnpkg.com/follow-redirects/-/follow-redirects-1.14.6.tgz#8cfb281bbc035b3c067d6cd975b0f6ade6e855cd" + integrity sha512-fhUl5EwSJbbl8AR+uYL2KQDxLkdSjZGR36xy46AO7cOMTrCMON6Sa28FmAnC2tRTDbd/Uuzz3aJBv7EBN7JH8A== for-in@^1.0.2: version "1.0.2" @@ -2829,7 +2989,7 @@ hoist-non-react-statics@^2.3.1: resolved "https://registry.yarnpkg.com/hoist-non-react-statics/-/hoist-non-react-statics-2.5.5.tgz#c5903cf409c0dfd908f388e619d86b9c1174cb47" integrity 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sha512-Ju0Bz/cEia55xDwUWEa8+olFpCiQoypjnQySseKtmjNrnps3P+xfpUmGr90T7yjlVJmOtybRvPXhKMbHr+fWnw== +iota-array@^1.0.0: + version "1.0.0" + resolved "https://registry.yarnpkg.com/iota-array/-/iota-array-1.0.0.tgz#81ef57fe5d05814cd58c2483632a99c30a0e8087" + integrity sha1-ge9X/l0FgUzVjCSDYyqZwwoOgIc= + ip-regex@^2.1.0: version "2.1.0" resolved "https://registry.yarnpkg.com/ip-regex/-/ip-regex-2.1.0.tgz#fa78bf5d2e6913c911ce9f819ee5146bb6d844e9" @@ -3092,6 +3270,11 @@ is-arguments@^1.0.4: call-bind "^1.0.2" has-tostringtag "^1.0.0" +is-arrayish@^0.2.1: + version "0.2.1" + resolved "https://registry.yarnpkg.com/is-arrayish/-/is-arrayish-0.2.1.tgz#77c99840527aa8ecb1a8ba697b80645a7a926a9d" + integrity sha1-d8mYQFJ6qOyxqLppe4BkWnqSap0= + is-binary-path@^1.0.0: version "1.0.1" resolved "https://registry.yarnpkg.com/is-binary-path/-/is-binary-path-1.0.1.tgz#75f16642b480f187a711c814161fd3a4a7655898" @@ -3099,7 +3282,7 @@ is-binary-path@^1.0.0: dependencies: binary-extensions "^1.0.0" -is-buffer@^1.1.5: +is-buffer@^1.0.2, is-buffer@^1.1.5: version "1.1.6" resolved "https://registry.yarnpkg.com/is-buffer/-/is-buffer-1.1.6.tgz#efaa2ea9daa0d7ab2ea13a97b2b8ad51fefbe8be" integrity sha512-NcdALwpXkTm5Zvvbk7owOUSvVvBKDgKP5/ewfXEznmQFfs4ZRmanOeKBTjRVjka3QFoN6XJ+9F3USqfHqTaU5w== @@ -3198,11 +3381,6 @@ is-glob@^4.0.0: dependencies: is-extglob "^2.1.1" -is-in-browser@^1.0.2, is-in-browser@^1.1.3: - version "1.1.3" - resolved "https://registry.yarnpkg.com/is-in-browser/-/is-in-browser-1.1.3.tgz#56ff4db683a078c6082eb95dad7dc62e1d04f835" - integrity sha1-Vv9NtoOgeMYILrldrX3GLh0E+DU= - is-number@^3.0.0: version "3.0.0" resolved "https://registry.yarnpkg.com/is-number/-/is-number-3.0.0.tgz#24fd6201a4782cf50561c810276afc7d12d71195" @@ -3311,23 +3489,27 @@ itk-viewer-icons@^11.11.2: resolved "https://registry.yarnpkg.com/itk-viewer-icons/-/itk-viewer-icons-11.11.2.tgz#513865dd0253b65db24bb3990e17449733e83994" integrity sha512-H6esUMsUI9f3d+NTwr1gDfE8LieoyyCiLatSXOhjZR4qISI9NzUXseX8rBWsMvBWp4mEeRtBM8NIbwUS9BRy/A== -"itk-viewer-material-ui@https://github.com/bnmajor/itk-viewer-material-ui#tensorboard-fixes": +"itk-viewer-material-ui@https://github.com/InsightSoftwareConsortium/itk-viewer-material-ui": version "0.0.0" - resolved "https://github.com/bnmajor/itk-viewer-material-ui#731ee20501d46fa611da7c9c5d0ab829fafac782" + resolved "https://github.com/InsightSoftwareConsortium/itk-viewer-material-ui#de41dc4ad4c3a7a5b457509cfd833ba9218aa630" dependencies: + "@emotion/react" "^11.6.0" + "@emotion/styled" "^11.6.0" "@kitware/vtk.js" "^19.0.2" - "@material-ui/core" "^4.12.3" - "@material-ui/lab" "^4.0.0-alpha.60" + "@mui/icons-material" "^5.1.1" + "@mui/material" "^5.1.1" "@xstate/react" "^1.6.1" + husky "^7.0.4" itk-viewer-icons "^11.11.2" + prettier "^2.5.0" react "^17.0.0" react-dom "^17.0.0" xstate "^4.23.4" jest-worker@^27.0.6: - version "27.3.1" - resolved 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- integrity sha512-DeGv18QsSiYLSVIEB2+l0af6OToUe0JB+trpzUxyqD2QRC/5AzzDrCrYffO5AHZ81QbffYvSN/pkfZaTWpRXlg== - dependencies: - "@babel/runtime" "^7.3.1" - css-vendor "^2.0.8" - jss "10.8.2" - -jss@10.8.2, jss@^10.5.1: - version "10.8.2" - resolved "https://registry.yarnpkg.com/jss/-/jss-10.8.2.tgz#4b2a30b094b924629a64928236017a52c7c97505" - integrity sha512-FkoUNxI329CKQ9OQC8L72MBF9KPf5q8mIupAJ5twU7G7XREW7ahb+7jFfrjZ4iy1qvhx1HwIWUIvkZBDnKkEdQ== - dependencies: - "@babel/runtime" "^7.3.1" - csstype "^3.0.2" - is-in-browser "^1.1.3" - tiny-warning "^1.0.2" - jszip@3.7.1: version "3.7.1" resolved "https://registry.yarnpkg.com/jszip/-/jszip-3.7.1.tgz#bd63401221c15625a1228c556ca8a68da6fda3d9" @@ -3520,6 +3637,11 @@ lie@~3.3.0: dependencies: immediate "~3.0.5" +lines-and-columns@^1.1.6: + version "1.2.4" + resolved "https://registry.yarnpkg.com/lines-and-columns/-/lines-and-columns-1.2.4.tgz#eca284f75d2965079309dc0ad9255abb2ebc1632" + integrity 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resolved "https://registry.yarnpkg.com/parent-module/-/parent-module-1.0.1.tgz#691d2709e78c79fae3a156622452d00762caaaa2" + integrity sha512-GQ2EWRpQV8/o+Aw8YqtfZZPfNRWZYkbidE9k5rpl/hC3vtHHBfGm2Ifi6qWV+coDGkrUKZAxE3Lot5kcsRlh+g== + dependencies: + callsites "^3.0.0" + +parse-json@^5.0.0: + version "5.2.0" + resolved "https://registry.yarnpkg.com/parse-json/-/parse-json-5.2.0.tgz#c76fc66dee54231c962b22bcc8a72cf2f99753cd" + integrity sha512-ayCKvm/phCGxOkYRSCM82iDwct8/EonSEgCSxWxD7ve6jHggsFl4fZVQBPRNgQoKiuV/odhFrGzQXZwbifC8Rg== + dependencies: + "@babel/code-frame" "^7.0.0" + error-ex "^1.3.1" + json-parse-even-better-errors "^2.3.0" + lines-and-columns "^1.1.6" + parseurl@~1.3.2, parseurl@~1.3.3: version "1.3.3" resolved "https://registry.yarnpkg.com/parseurl/-/parseurl-1.3.3.tgz#9da19e7bee8d12dff0513ed5b76957793bc2e8d4" @@ -4140,6 +4295,11 @@ path-to-regexp@0.1.7: resolved "https://registry.yarnpkg.com/path-to-regexp/-/path-to-regexp-0.1.7.tgz#df604178005f522f15eb4490e7247a1bfaa67f8c" integrity sha1-32BBeABfUi8V60SQ5yR6G/qmf4w= +path-type@^4.0.0: + version "4.0.0" + resolved "https://registry.yarnpkg.com/path-type/-/path-type-4.0.0.tgz#84ed01c0a7ba380afe09d90a8c180dcd9d03043b" + integrity sha512-gDKb8aZMDeD/tZWs9P6+q0J9Mwkdl6xMV8TjnGP3qJVJ06bdMgkbBlLU8IdfOsIsFz2BW1rNVT3XuNEl8zPAvw== + picocolors@^1.0.0: version "1.0.0" resolved "https://registry.yarnpkg.com/picocolors/-/picocolors-1.0.0.tgz#cb5bdc74ff3f51892236eaf79d68bc44564ab81c" @@ -4186,11 +4346,6 @@ pkg-dir@^4.1.0, pkg-dir@^4.2.0: dependencies: find-up "^4.0.0" -popper.js@1.16.1-lts: - version "1.16.1-lts" - resolved "https://registry.yarnpkg.com/popper.js/-/popper.js-1.16.1-lts.tgz#cf6847b807da3799d80ee3d6d2f90df8a3f50b05" - integrity sha512-Kjw8nKRl1m+VrSFCoVGPph93W/qrSO7ZkqPpTf7F4bk/sqcfWK019dWBUpE/fBOsOQY1dks/Bmcbfn1heM/IsA== - portfinder@^1.0.26: version "1.0.28" resolved "https://registry.yarnpkg.com/portfinder/-/portfinder-1.0.28.tgz#67c4622852bd5374dd1dd900f779f53462fac778" @@ -4234,26 +4389,31 @@ 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sha512-uBHU3L3czsIyYXKX88fdrGovxdSCoTGDRZ6SYXtSRxLZUzHg5P/66Ht6uoUlHu9EZod+inXhKo3qQgwXUT/y1w== dependencies: buffer-from "^1.0.0" source-map "^0.6.0" @@ -4955,7 +5120,7 @@ source-map-url@^0.4.0: resolved "https://registry.yarnpkg.com/source-map-url/-/source-map-url-0.4.1.tgz#0af66605a745a5a2f91cf1bbf8a7afbc283dec56" integrity sha512-cPiFOTLUKvJFIg4SKVScy4ilPPW6rFgMgfuZJPNoDuMs3nC1HbMUycBoJw77xFIp6z1UJQJOfx6C9GMH80DiTw== -source-map@^0.5.0, source-map@^0.5.6: +source-map@^0.5.0, source-map@^0.5.6, source-map@^0.5.7: version "0.5.7" resolved "https://registry.yarnpkg.com/source-map/-/source-map-0.5.7.tgz#8a039d2d1021d22d1ea14c80d8ea468ba2ef3fcc" integrity sha1-igOdLRAh0i0eoUyA2OpGi6LvP8w= @@ -5088,6 +5253,11 @@ style-loader@^2.0.0: loader-utils "^2.0.0" schema-utils "^3.0.0" +stylis@4.0.13: + version "4.0.13" + resolved "https://registry.yarnpkg.com/stylis/-/stylis-4.0.13.tgz#f5db332e376d13cc84ecfe5dace9a2a51d954c91" + integrity 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import event_accumulator from tensorboard.data import provider from tensorboard.plugins import base_plugin from tensorboard.plugins.scalar import metadata @@ -36,13 +40,26 @@ def __init__(self, context): context: A base_plugin.TBContext instance. """ self._data_provider = context.data_provider + self._logdir = context.logdir def get_plugin_apps(self): return { "/client/*": self._serve_static_file, "/static/*": self._serve_static_file, + "/images": self._serve_image, + "/tags": self._serve_tags, } + @wrappers.Request.application + def _serve_image(self, request): + response = {'images': []} + for eis in self._images: + np_arr = tf.io.decode_image(eis).numpy() + if np_arr.ndim == 4: + np_arr = np_arr[:,:,:,0] + response['images'].append({'array': np_arr.tolist()}) + return http_util.Respond(request, response, "application/json") + @wrappers.Request.application def _serve_tags(self, request): """Serves run to tag info. @@ -91,11 +108,24 @@ def _serve_static_file(self, request): contents, content_type=mimetype, headers=TensorboardPlugin3D.headers ) + def _find_all_images(self): + self._images = [] + events = sorted(glob.glob(os.path.join(self._logdir, '*'))) + for event in events: + ea = event_accumulator.EventAccumulator(event) + ea.Reload() + tags = ea.Tags()['images'] + for tag in tags: + for image in ea.Images(tag): + self._images.append(image.encoded_image_string) + return len(self._images) + def is_active(self): """Returns whether there is relevant data for the plugin to process. If there is no any pending run, hide the plugin """ - return True + images_available = self._find_all_images() + return images_available def frontend_metadata(self): return base_plugin.FrontendMetadata( diff --git a/tensorboard_plugin_3d/static/index.html b/tensorboard_plugin_3d/static/index.html index a527bf6..9f65584 100644 --- a/tensorboard_plugin_3d/static/index.html +++ b/tensorboard_plugin_3d/static/index.html @@ -1,2 +1,2 @@
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