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ENH: Add wrapping for PhasedArray3DSpecialCoordinatesImage and filters
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,58 @@ | ||
| itk_wrap_include("list") | ||
| itk_wrap_include("complex") | ||
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| # Explicitly override template method wrappings so that implicit | ||
| # scalar type is always `double` for greatest precision. | ||
| # Adds wrapping overrides to `itkPhasedArray3DSpecialCoordinatesImage_ext.i` configured with | ||
| # CMake for input to SWIG wrapping generation. | ||
| # See `DECL_PYTHON_IMAGEBASE_CLASS` definition in `ITK/Wrapping/Generators/Python/PyBase/pyBase.i` | ||
| # for precedent. | ||
| string(APPEND ITK_WRAP_PYTHON_SWIG_EXT " | ||
| %inline %{ | ||
| #include \"itkContinuousIndexSwigInterface.h\" | ||
| %} | ||
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| %define DECL_PYTHON_PHASEDARRAY3DSPECIALCOORDINATESIMAGE_CLASS(swig_name, template_params) | ||
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| %extend swig_name { | ||
| itkIndex##template_params TransformPhysicalPointToIndex(const itkPointD##template_params & point ) { | ||
| itkIndex##template_params idx; | ||
| self->TransformPhysicalPointToIndex<double>( point, idx ); | ||
| return idx; | ||
| } | ||
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| itkContinuousIndexD##template_params TransformPhysicalPointToContinuousIndex(const itkPointD##template_params & point ) { | ||
| itkContinuousIndexD##template_params idx; | ||
| self->TransformPhysicalPointToContinuousIndex<double>( point, idx ); | ||
| return idx; | ||
| } | ||
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| itkPointD##template_params TransformContinuousIndexToPhysicalPoint(const itkContinuousIndexD##template_params & idx ) { | ||
| itkPointD##template_params point; | ||
| self->TransformContinuousIndexToPhysicalPoint<double>( idx, point ); | ||
| return point; | ||
| } | ||
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| itkPointD##template_params TransformIndexToPhysicalPoint(const itkIndex##template_params & idx ) { | ||
| itkPointD##template_params point; | ||
| self->TransformIndexToPhysicalPoint<double>( idx, point ); | ||
| return point; | ||
| } | ||
| } | ||
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| %enddef | ||
| ") | ||
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| # Wrap class for real and complex pixel types. Dimension is always 3. | ||
| itk_wrap_class("itk::PhasedArray3DSpecialCoordinatesImage" POINTER_WITH_SUPERCLASS) | ||
| foreach(t ${WRAP_ITK_SCALAR}) | ||
| itk_wrap_template("${ITKM_${t}}" "${ITKT_${t}}") | ||
| string(APPEND ITK_WRAP_PYTHON_SWIG_EXT "DECL_PYTHON_PHASEDARRAY3DSPECIALCOORDINATESIMAGE_CLASS(${WRAPPER_SWIG_NAME}${ITKM_${t}}, 3)\n") | ||
| endforeach() | ||
| foreach(t3 ${WRAP_ITK_COMPLEX_REAL}) | ||
| itk_wrap_template("${ITKM_${t3}}" "${ITKT_${t3}}") | ||
| string(APPEND ITK_WRAP_PYTHON_SWIG_EXT "DECL_PYTHON_PHASEDARRAY3DSPECIALCOORDINATESIMAGE_CLASS(${WRAPPER_SWIG_NAME}${ITKM_${t3}}, 3)\n") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| # Then wrap consuming filters in itkPhasedArray3DSpecialCoordinatesImageFilters.wrap |
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wrapping/itkPhasedArray3DSpecialCoordinatesImageFilters.wrap
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,150 @@ | ||
| # ITK image filters wrapped for ITKUltrasound `itk::PhasedArray3DSpecialCoordinatesImage` inputs. | ||
| # Must be wrapped in a separate file after `itkPhasedArray3DSpecialCoordinatesImage.wrap` so that | ||
| # SWIG does not implicitly define erroneous overrides for template methods such as | ||
| # `TransformPhysicalPointToContinuousIndex`, etc. | ||
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| # See `WRAPPER_SUBMODULE_ORDER` in CMakeLists.txt for where | ||
| # `itkPhasedArray3DSpecialCoordinatesImageFilters.wrap` is set to | ||
| # be wrapped after `itkPhasedArray3DSpecialCoordinatesImage.wrap`. | ||
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| itk_wrap_include("itkPhasedArray3DSpecialCoordinatesImage.h") | ||
| itk_wrap_class("itk::ImageSource" POINTER) | ||
| foreach(real_type ${WRAP_ITK_SCALAR}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${real_type}}" "itk::PhasedArray3DSpecialCoordinatesImage<${ITKT_${real_type}}>") | ||
| endforeach() | ||
| foreach(complex_type ${WRAP_ITK_COMPLEX_REAL}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${complex_type}}" "itk::PhasedArray3DSpecialCoordinatesImage<${ITKT_${complex_type}}>") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_include("itkImage.h") | ||
| itk_wrap_class("itk::ImageToImageFilter" POINTER) | ||
| foreach(t ${WRAP_ITK_SCALAR}) | ||
| foreach(ut ${WRAP_ITK_INT}) | ||
| itk_wrap_template("I${ITKM_${t}}3PA3DSCI${ITKM_${ut}}" | ||
| "itk::Image< ${ITKT_${t}}, 3 >, itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${ut}} >") | ||
| endforeach() | ||
| foreach(t2 ${WRAP_ITK_SCALAR}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t}}PA3DSCI${ITKM_${t2}}" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >, itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t2}} >") | ||
| endforeach() | ||
| itk_wrap_template("PA3DSCI${ITKM_${t}}I${ITKM_${t}}3" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >, itk::Image< ${ITKT_${t}}, 3>") | ||
| endforeach() | ||
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| foreach(rt ${WRAP_ITK_REAL}) | ||
| foreach(ct ${WRAP_ITK_COMPLEX_REAL}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${rt}}PA3DSCI${ITKM_${ct}}" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${rt}} >, itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${ct}} >") | ||
| itk_wrap_template("PA3DSCI${ITKM_${ct}}PA3DSCI${ITKM_${rt}}" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${ct}} >, itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${rt}} >") | ||
| endforeach() | ||
| endforeach() | ||
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| foreach(t3 ${WRAP_ITK_COMPLEX_REAL}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t3}}PA3DSCI${ITKM_${t3}}" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t3}} >, itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t3}} >") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_class("itk::ImageFileReader" POINTER_WITH_SUPERCLASS) | ||
| foreach(t ${WRAP_ITK_SCALAR}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t}}" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_class("itk::ImageFileWriter" POINTER) | ||
| foreach(t ${WRAP_ITK_SCALAR}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t}}" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_class("itk::CastImageFilter" POINTER_WITH_2_SUPERCLASSES) | ||
| foreach(t1 ${WRAP_ITK_SCALAR}) | ||
| foreach(t2 ${WRAP_ITK_SCALAR}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t1}}PA3DSCI${ITKM_${t2}}" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t1}} >, itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t2}} >") | ||
| itk_wrap_template("PA3DSCI${ITKM_${t1}}I${ITKM_${t2}}3" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t1}} >, itk::Image< ${ITKT_${t2}}, 3 >") | ||
| endforeach() | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_class("itk::RescaleIntensityImageFilter" POINTER_WITH_2_SUPERCLASSES) | ||
| foreach(t ${WRAP_ITK_SCALAR}) | ||
| foreach(ut ${WRAP_ITK_INT}) | ||
| itk_wrap_template("I${ITKM_${t}}3PA3DSCI${ITKM_${ut}}" | ||
| "itk::Image< ${ITKT_${t}}, 3 >, itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${ut}} >") | ||
| endforeach() | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_include("itkSpectra1DSupportWindowToMaskImageFilter.h") | ||
| itk_wrap_class("itk::Spectra1DSupportWindowToMaskImageFilter" POINTER_WITH_2_SUPERCLASSES) | ||
| foreach(t ${WRAP_ITK_INT}) | ||
| itk_wrap_template("IlistitkIndex33PA3DSCI${ITKM_${t}}" | ||
| "itk::Image< std::list< itk::Index< 3 > >, 3 >, itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| # The rest is needed for ResampleImageFilter and interpolator functions | ||
| set(resample_filter_pixel_types "F") | ||
| if(ITK_WRAP_unsigned_char) | ||
| list(APPEND resample_filter_pixel_types "UC") | ||
| endif() | ||
| itk_wrap_include("itkResampleImageFilter.h") | ||
| itk_wrap_class("itk::ResampleImageFilter" POINTER) | ||
| foreach(t ${resample_filter_pixel_types}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t}}I${ITKM_${t}}3" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >, itk::Image< ${ITKT_${t}}, 3 >") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_class("itk::ImageFunction" POINTER) | ||
| foreach(t ${resample_filter_pixel_types}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t}}${ITKM_D}" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >, ${ITKT_D}, ${ITKT_D}") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_class("itk::InterpolateImageFunction" POINTER) | ||
| foreach(t ${resample_filter_pixel_types}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t}}${ITKM_D}" "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >, ${ITKT_D}") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_class("itk::NearestNeighborInterpolateImageFunction" POINTER) | ||
| foreach(t ${resample_filter_pixel_types}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t}}${ITKM_D}" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >, ${ITKT_D}") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_class("itk::LinearInterpolateImageFunction" POINTER) | ||
| foreach(t ${resample_filter_pixel_types}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t}}${ITKM_D}" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >, ${ITKT_D}") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_class("itk::GaussianInterpolateImageFunction" POINTER) | ||
| foreach(t ${resample_filter_pixel_types}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t}}${ITKM_D}" | ||
| "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >, ${ITKT_D}") | ||
| endforeach() | ||
| itk_end_wrap_class() | ||
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| itk_wrap_include("itkWindowedSincInterpolateImageFunction.h") | ||
| set(window_functions "Hamming" "Cosine" "Welch" "Lanczos") | ||
| set(radii 2 3) | ||
| itk_wrap_class("itk::WindowedSincInterpolateImageFunction" POINTER) | ||
| foreach(t ${resample_filter_pixel_types}) | ||
| foreach(r ${radii}) # radius | ||
| foreach(function ${window_functions}) | ||
| itk_wrap_template("PA3DSCI${ITKM_${t}}${r}${function}" "itk::PhasedArray3DSpecialCoordinatesImage< ${ITKT_${t}} >, ${r}, itk::Function::${function}WindowFunction< ${r} >") | ||
| endforeach() | ||
| endforeach() | ||
| endforeach() | ||
| itk_end_wrap_class() |