forked from google/deepvariant
-
Notifications
You must be signed in to change notification settings - Fork 0
/
build-prereq.sh
executable file
·145 lines (118 loc) · 5.76 KB
/
build-prereq.sh
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
#!/bin/bash
set -euo pipefail
# Copyright 2017 Google LLC.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions
# are met:
#
# 1. Redistributions of source code must retain the above copyright notice,
# this list of conditions and the following disclaimer.
#
# 2. Redistributions in binary form must reproduce the above copyright
# notice, this list of conditions and the following disclaimer in the
# documentation and/or other materials provided with the distribution.
#
# 3. Neither the name of the copyright holder nor the names of its
# contributors may be used to endorse or promote products derived from this
# software without specific prior written permission.
#
# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
# AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
# ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
# LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
# CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
# SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
# INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
# CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
# ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
# POSSIBILITY OF SUCH DAMAGE.
echo ========== This script is only maintained for Ubuntu 20.04.
echo ========== Load config settings.
source settings.sh
################################################################################
# Misc. setup
################################################################################
note_build_stage "Install the runtime packages"
./run-prereq.sh
note_build_stage "Update package list"
sudo -H apt-get -qq -y update
note_build_stage "build-prereq.sh: Install development packages"
# Need to wait for dpkg lock (see internal)
wait_for_dpkg_lock
sudo -H apt-get -qq -y install pkg-config zip g++ zlib1g-dev unzip curl git wget > /dev/null
################################################################################
# bazel
################################################################################
note_build_stage "Install bazel"
function ensure_wanted_bazel_version {
local wanted_bazel_version=$1
rm -rf ~/bazel
mkdir ~/bazel
if
v=$(bazel --bazelrc=/dev/null --ignore_all_rc_files version) &&
echo "$v" | awk -v b="$wanted_bazel_version" '/Build label/ { exit ($3 != b)}'
then
echo "Bazel ${wanted_bazel_version} already installed on the machine, not reinstalling"
else
pushd ~/bazel
curl -L -O https://github.com/bazelbuild/bazel/releases/download/"${wanted_bazel_version}"/bazel-"${wanted_bazel_version}"-installer-linux-x86_64.sh
chmod +x bazel-*.sh
./bazel-"${wanted_bazel_version}"-installer-linux-x86_64.sh --user > /dev/null
rm bazel-"${wanted_bazel_version}"-installer-linux-x86_64.sh
popd
fi
}
ensure_wanted_bazel_version "${DV_BAZEL_VERSION}"
################################################################################
# CLIF
################################################################################
note_build_stage "Install CLIF binary"
if [[ -e /usr/local/bin/pyclif ]];
then
echo "CLIF already installed."
else
# Build clif binary from scratch. Might not be ideal because it installs a
# bunch of dependencies, but this works fine when we used this in a Dockerfile
# because we don't do build-prereq.sh in the final image.
note_build_stage "Build CLIF."
time sudo ./tools/build_clif.sh
# TODO:
# Figure out why these symbolic links are needed and see if
# we can do this better.
sudo mkdir -p /usr/clang/bin/
sudo ln -sf /usr/local/bin/clif-matcher /usr/clang/bin/clif-matcher
sudo mkdir -p /usr/local/clif/bin
sudo ln -sf /usr/local/bin/pyclif* /usr/local/clif/bin/
DIST_PACKAGES_DIR=$(python3 -c "import site; print(site.getsitepackages()[0])")
sudo ln -sf "${DIST_PACKAGES_DIR}"/clif/python /usr/local/clif/
fi
################################################################################
# TensorFlow
################################################################################
note_build_stage "Download and configure TensorFlow sources"
if [[ ! -d ../tensorflow ]]; then
note_build_stage "Cloning TensorFlow from github as ../tensorflow doesn't exist"
(cd .. && git clone https://github.com/tensorflow/tensorflow)
fi
# PYTHON_BIN_PATH and PYTHON_LIB_PATH are set in settings.sh.
# I had to remove this line in tensorflow v2.5.0 because I got an ERROR:
# rule() got unexpected keyword argument 'incompatible_use_toolchain_transition'.
# I changed the llvm path to zip to avoid flakiness.
(cd ../tensorflow &&
git checkout "${DV_CPP_TENSORFLOW_TAG}" &&
echo | ./configure)
# We want to use a newer absl version. So I grabbed the one from TensorFlow
# r2.13. Eventually we'll want to update to TF 2.13. But for now this works.
# TODO: After updating to v2.13, we can remove this.
wget https://raw.githubusercontent.com/tensorflow/tensorflow/r2.13/third_party/absl/workspace.bzl -O ../tensorflow/third_party/absl/workspace.bzl
wget https://raw.githubusercontent.com/tensorflow/tensorflow/r2.13/third_party/absl/absl_designated_initializers.patch -O ../tensorflow/third_party/absl/absl_design\
ated_initializers.patch
note_build_stage "Set pyparsing to 2.2.0 for CLIF."
export PATH="$HOME/.local/bin":$PATH
pip3 uninstall -y pyparsing && pip3 install -Iv 'pyparsing==2.2.0'
note_build_stage "Set pyparsing to 2.2.0 for CLIF."
export PATH="$HOME/.local/bin":$PATH
pip3 uninstall -y pyparsing && pip3 install -Iv 'pyparsing==2.2.0'
note_build_stage "build-prereq.sh complete"