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Hi,
I am thinking about assembling MHC-I of some other non-human species using Kourami. And I prepared the input bam file and the reference directory following the guideline for Human HLA. Here is an error message I got.
----------------REF GRAPH CONSTRUCTION--------------
java.lang.NullPointerException
at MergeMSFs.merge(MergeMSFs.java:264)
at HLA.loadGraphs(HLA.java:82)
at HLA.(HLA.java:62)
at HLA.main(HLA.java:556)
Do you have any idea what might be the reason for the error? And is it doable for other species?
Thanks,
Yuan
The text was updated successfully, but these errors were encountered:
Hi,
I am thinking about assembling MHC-I of some other non-human species using Kourami. And I prepared the input bam file and the reference directory following the guideline for Human HLA. Here is an error message I got.
java -jar $script/Kourami.jar -d $ref -o KouramiPred Kourami.bam
----------------REF GRAPH CONSTRUCTION--------------
java.lang.NullPointerException
at MergeMSFs.merge(MergeMSFs.java:264)
at HLA.loadGraphs(HLA.java:82)
at HLA.(HLA.java:62)
at HLA.main(HLA.java:556)
Do you have any idea what might be the reason for the error? And is it doable for other species?
Thanks,
Yuan
The text was updated successfully, but these errors were encountered: