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Prepare a testing battery #127

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KamilSJaron opened this issue Aug 22, 2023 · 1 comment
Open

Prepare a testing battery #127

KamilSJaron opened this issue Aug 22, 2023 · 1 comment
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@KamilSJaron
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0.9.9 Sliding For the future release of sploidyplot_obj branch dev for issues related to development branch genomescope included smudgeplot included if smudgeplot was posted with the quesiton / problem

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KamilSJaron commented Aug 22, 2023 •
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Need to make a list somewhere... but for now.

Compared to Smudgeplot
Sacharomyces: SRR3265401
Fragaria iinumae: DRR013884

Compared to PloidyPlot. These genomescope/smudgeplot plots can be found here: https://tolqc.cog.sanger.ac.uk/
Drosophila funebris: idDroFune2
Drosophila obscura: idDroObsc58
Hyperoodon ampullatus: mHypAmp2
Tiliacea citrago: ilTilCitr1
@KamilSJaron KamilSJaron added smudgeplot included if smudgeplot was posted with the quesiton / problem genomescope included dev for issues related to development branch 0.1.3 Single-hung for smudgeplot problems made with the first generation of smudgeplot 0.3.0 Oriel Upcoming version of smudgeplot 0.2.5 Double-hung Smudgeplot done with the 0.2.5 Double-hung with curtains version and removed 0.1.3 Single-hung for smudgeplot problems made with the first generation of smudgeplot labels Aug 23, 2023
@KamilSJaron KamilSJaron added 0.9.9 Sliding For the future release of sploidyplot_obj branch and removed 0.3.0 Oriel Upcoming version of smudgeplot 0.2.5 Double-hung Smudgeplot done with the 0.2.5 Double-hung with curtains version labels Oct 14, 2024
@KamilSJaron KamilSJaron self-assigned this Oct 14, 2024
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Pulling in a table form:

https://docs.google.com/spreadsheets/d/132-NBcfCUIbRwH3JfRGoI0oW2BUP7KssrOUEJOwXWz4/edit?usp=sharing

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@KamilSJaron KamilSJaron

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0.9.9 Sliding For the future release of sploidyplot_obj branch dev for issues related to development branch genomescope included smudgeplot included if smudgeplot was posted with the quesiton / problem
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New pythonic release
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