Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Plots.jl fails to load on Colab[BUG] #4633

Closed
Snimm opened this issue Jan 16, 2023 · 1 comment
Closed

Plots.jl fails to load on Colab[BUG] #4633

Snimm opened this issue Jan 16, 2023 · 1 comment
Labels
bug upstream julia or dependencies

Comments

@Snimm
Copy link

Snimm commented Jan 16, 2023

#3421 No longer works.

    Updating registry at `~/.julia/registries/General.toml`
   Resolving package versions...
   Installed x265_jll ───────────────────── v3.5.0+0
   Installed JpegTurbo_jll ──────────────── v2.1.2+0
   Installed libfdk_aac_jll ─────────────── v2.0.2+0
   Installed GR_jll ─────────────────────── v0.71.3+0
   Installed Libmount_jll ───────────────── v2.35.0+0
   Installed LERC_jll ───────────────────── v3.0.0+1
   Installed Opus_jll ───────────────────── v1.3.2+0
   Installed LoggingExtras ──────────────── v1.0.0
   Installed Xorg_xkbcomp_jll ───────────── v1.4.2+4
   Installed RelocatableFolders ─────────── v1.0.0
   Installed Measures ───────────────────── v0.3.2
   Installed Grisu ──────────────────────── v1.0.2
   Installed Formatting ─────────────────── v0.4.2
   Installed Xorg_xcb_util_wm_jll ───────── v0.4.1+1
   Installed Xorg_xcb_util_image_jll ────── v0.4.0+1
   Installed PlotUtils ──────────────────── v1.3.2
   Installed Contour ────────────────────── v0.6.2
   Installed RecipesPipeline ────────────── v0.6.11
   Installed Xorg_libpthread_stubs_jll ──── v0.1.0+3
   Installed OpenSSL ────────────────────── v1.3.3
   Installed Cairo_jll ──────────────────── v1.16.1+1
   Installed Fontconfig_jll ─────────────── v2.13.93+0
   Installed Xorg_xcb_util_jll ──────────── v0.4.0+1
   Installed Libgpg_error_jll ───────────── v1.42.0+0
   Installed Xorg_libxkbfile_jll ────────── v1.1.0+4
   Installed HTTP ───────────────────────── v1.7.3
   Installed Xorg_libXinerama_jll ───────── v1.1.4+4
   Installed Xorg_libXau_jll ────────────── v1.0.9+4
   Installed Missings ───────────────────── v1.1.0
   Installed ColorSchemes ───────────────── v3.20.0
   Installed FFMPEG ─────────────────────── v0.4.1
   Installed Showoff ────────────────────── v1.0.3
   Installed Qt5Base_jll ────────────────── v5.15.3+2
   Installed xkbcommon_jll ──────────────── v1.4.1+0
   Installed Bzip2_jll ──────────────────── v1.0.8+0
   Installed Xorg_xcb_util_keysyms_jll ──── v0.4.0+1
   Installed SimpleBufferStream ─────────── v1.1.0
   Installed Pipe ───────────────────────── v1.3.0
   Installed HarfBuzz_jll ───────────────── v2.8.1+1
   Installed PlotThemes ─────────────────── v3.1.0
   Installed LZO_jll ────────────────────── v2.10.1+0
   Installed NaNMath ────────────────────── v1.0.1
   Installed TranscodingStreams ─────────── v0.9.11
   Installed fzf_jll ────────────────────── v0.29.0+0
   Installed FriBidi_jll ────────────────── v1.0.10+0
   Installed GLFW_jll ───────────────────── v3.3.8+0
   Installed UnicodeFun ─────────────────── v0.4.1
   Installed x264_jll ───────────────────── v2021.5.5+0
   Installed CodecZlib ──────────────────── v0.7.0
   Installed FreeType2_jll ──────────────── v2.10.4+0
   Installed StatsAPI ───────────────────── v1.5.0
   Installed JLFzf ──────────────────────── v0.1.5
   Installed Colors ─────────────────────── v0.12.10
   Installed DataStructures ─────────────── v0.18.13
   Installed StatsBase ──────────────────── v0.33.21
   Installed Scratch ────────────────────── v1.1.1
   Installed ColorTypes ─────────────────── v0.11.4
   Installed libpng_jll ─────────────────── v1.6.38+0
   Installed Xorg_libxcb_jll ────────────── v1.13.0+3
   Installed libaom_jll ─────────────────── v3.4.0+0
   Installed GR ─────────────────────────── v0.71.3
   Installed Plots ──────────────────────── v1.38.2
   Installed Xorg_libXext_jll ───────────── v1.3.4+4
   Installed Expat_jll ──────────────────── v2.4.8+0
   Installed Libtiff_jll ────────────────── v4.4.0+0
   Installed TensorCore ─────────────────── v0.1.1
   Installed Libffi_jll ─────────────────── v3.2.2+1
   Installed Zstd_jll ───────────────────── v1.5.2+0
   Installed ColorVectorSpace ───────────── v0.9.10
   Installed OrderedCollections ─────────── v1.4.1
   Installed Xorg_libXi_jll ─────────────── v1.7.10+4
   Installed Xorg_libXrender_jll ────────── v0.9.10+4
   Installed Ogg_jll ────────────────────── v1.3.5+1
   Installed XSLT_jll ───────────────────── v1.1.34+0
   Installed Xorg_libXcursor_jll ────────── v1.2.0+4
   Installed Wayland_protocols_jll ──────── v1.25.0+0
   Installed Libuuid_jll ────────────────── v2.36.0+0
   Installed MacroTools ─────────────────── v0.5.10
   Installed Graphite2_jll ──────────────── v1.3.14+0
   Installed libass_jll ─────────────────── v0.15.1+0
   Installed Xorg_xcb_util_renderutil_jll ─ v0.3.9+1
   Installed XML2_jll ───────────────────── v2.10.3+0
   Installed Pixman_jll ─────────────────── v0.40.1+0
   Installed Gettext_jll ────────────────── v0.21.0+0
   Installed Wayland_jll ────────────────── v1.21.0+0
   Installed Latexify ───────────────────── v0.15.18
   Installed Xorg_xtrans_jll ────────────── v1.4.0+3
   Installed OpenSSL_jll ────────────────── v1.1.19+0
   Installed FFMPEG_jll ─────────────────── v4.4.2+2
   Installed Libgcrypt_jll ──────────────── v1.8.7+0
   Installed BitFlags ───────────────────── v0.1.7
   Installed Xorg_xkeyboard_config_jll ──── v2.27.0+4
   Installed DataAPI ────────────────────── v1.14.0
   Installed FixedPointNumbers ──────────── v0.8.4
   Installed Xorg_libXrandr_jll ─────────── v1.5.2+4
   Installed Xorg_libXfixes_jll ─────────── v5.0.3+4
   Installed RecipesBase ────────────────── v1.3.3
   Installed LAME_jll ───────────────────── v3.100.1+0
   Installed Libiconv_jll ───────────────── v1.16.1+2
   Installed IniFile ────────────────────── v0.5.1
   Installed LaTeXStrings ───────────────── v1.3.0
   Installed URIs ───────────────────────── v1.4.1
   Installed libvorbis_jll ──────────────── v1.3.7+1
   Installed Glib_jll ───────────────────── v2.74.0+2
   Installed Xorg_libXdmcp_jll ──────────── v1.1.3+4
   Installed Xorg_libX11_jll ────────────── v1.6.9+4
   Installed Unzip ──────────────────────── v0.2.0
   Installed Libglvnd_jll ───────────────── v1.6.0+0
   Installed SortingAlgorithms ──────────── v1.1.0
    Updating `~/.julia/environments/v1.8/Project.toml`
  [91a5bcdd] + Plots v1.38.2
    Updating `~/.julia/environments/v1.8/Manifest.toml`
  [d1d4a3ce] + BitFlags v0.1.7
  [944b1d66] + CodecZlib v0.7.0
  [35d6a980] + ColorSchemes v3.20.0
  [3da002f7] + ColorTypes v0.11.4
  [c3611d14] + ColorVectorSpace v0.9.10
  [5ae59095] + Colors v0.12.10
  [d38c429a] + Contour v0.6.2
  [9a962f9c] + DataAPI v1.14.0
  [864edb3b] + DataStructures v0.18.13
  [c87230d0] + FFMPEG v0.4.1
  [53c48c17] + FixedPointNumbers v0.8.4
  [59287772] + Formatting v0.4.2
  [28b8d3ca] + GR v0.71.3
  [42e2da0e] + Grisu v1.0.2
  [cd3eb016] + HTTP v1.7.3
  [83e8ac13] + IniFile v0.5.1
  [1019f520] + JLFzf v0.1.5
  [b964fa9f] + LaTeXStrings v1.3.0
  [23fbe1c1] + Latexify v0.15.18
  [e6f89c97] + LoggingExtras v1.0.0
  [1914dd2f] + MacroTools v0.5.10
  [442fdcdd] + Measures v0.3.2
  [e1d29d7a] + Missings v1.1.0
  [77ba4419] + NaNMath v1.0.1
  [4d8831e6] + OpenSSL v1.3.3
  [bac558e1] + OrderedCollections v1.4.1
  [b98c9c47] + Pipe v1.3.0
  [ccf2f8ad] + PlotThemes v3.1.0
  [995b91a9] + PlotUtils v1.3.2
  [91a5bcdd] + Plots v1.38.2
  [3cdcf5f2] + RecipesBase v1.3.3
  [01d81517] + RecipesPipeline v0.6.11
  [05181044] + RelocatableFolders v1.0.0
  [6c6a2e73] + Scratch v1.1.1
  [992d4aef] + Showoff v1.0.3
  [777ac1f9] + SimpleBufferStream v1.1.0
  [a2af1166] + SortingAlgorithms v1.1.0
  [82ae8749] + StatsAPI v1.5.0
  [2913bbd2] + StatsBase v0.33.21
  [62fd8b95] + TensorCore v0.1.1
  [3bb67fe8] + TranscodingStreams v0.9.11
  [5c2747f8] + URIs v1.4.1
  [1cfade01] + UnicodeFun v0.4.1
  [41fe7b60] + Unzip v0.2.0
  [6e34b625] + Bzip2_jll v1.0.8+0
  [83423d85] + Cairo_jll v1.16.1+1
  [2e619515] + Expat_jll v2.4.8+0
  [b22a6f82] + FFMPEG_jll v4.4.2+2
  [a3f928ae] + Fontconfig_jll v2.13.93+0
  [d7e528f0] + FreeType2_jll v2.10.4+0
  [559328eb] + FriBidi_jll v1.0.10+0
  [0656b61e] + GLFW_jll v3.3.8+0
  [d2c73de3] + GR_jll v0.71.3+0
  [78b55507] + Gettext_jll v0.21.0+0
  [7746bdde] + Glib_jll v2.74.0+2
  [3b182d85] + Graphite2_jll v1.3.14+0
  [2e76f6c2] + HarfBuzz_jll v2.8.1+1
  [aacddb02] + JpegTurbo_jll v2.1.2+0
  [c1c5ebd0] + LAME_jll v3.100.1+0
  [88015f11] + LERC_jll v3.0.0+1
  [dd4b983a] + LZO_jll v2.10.1+0
⌅ [e9f186c6] + Libffi_jll v3.2.2+1
  [d4300ac3] + Libgcrypt_jll v1.8.7+0
  [7e76a0d4] + Libglvnd_jll v1.6.0+0
  [7add5ba3] + Libgpg_error_jll v1.42.0+0
  [94ce4f54] + Libiconv_jll v1.16.1+2
  [4b2f31a3] + Libmount_jll v2.35.0+0
  [89763e89] + Libtiff_jll v4.4.0+0
  [38a345b3] + Libuuid_jll v2.36.0+0
  [e7412a2a] + Ogg_jll v1.3.5+1
  [458c3c95] + OpenSSL_jll v1.1.19+0
  [91d4177d] + Opus_jll v1.3.2+0
  [30392449] + Pixman_jll v0.40.1+0
  [ea2cea3b] + Qt5Base_jll v5.15.3+2
  [a2964d1f] + Wayland_jll v1.21.0+0
  [2381bf8a] + Wayland_protocols_jll v1.25.0+0
  [02c8fc9c] + XML2_jll v2.10.3+0
  [aed1982a] + XSLT_jll v1.1.34+0
  [4f6342f7] + Xorg_libX11_jll v1.6.9+4
  [0c0b7dd1] + Xorg_libXau_jll v1.0.9+4
  [935fb764] + Xorg_libXcursor_jll v1.2.0+4
  [a3789734] + Xorg_libXdmcp_jll v1.1.3+4
  [1082639a] + Xorg_libXext_jll v1.3.4+4
  [d091e8ba] + Xorg_libXfixes_jll v5.0.3+4
  [a51aa0fd] + Xorg_libXi_jll v1.7.10+4
  [d1454406] + Xorg_libXinerama_jll v1.1.4+4
  [ec84b674] + Xorg_libXrandr_jll v1.5.2+4
  [ea2f1a96] + Xorg_libXrender_jll v0.9.10+4
  [14d82f49] + Xorg_libpthread_stubs_jll v0.1.0+3
  [c7cfdc94] + Xorg_libxcb_jll v1.13.0+3
  [cc61e674] + Xorg_libxkbfile_jll v1.1.0+4
  [12413925] + Xorg_xcb_util_image_jll v0.4.0+1
  [2def613f] + Xorg_xcb_util_jll v0.4.0+1
  [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.0+1
  [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.9+1
  [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.1+1
  [35661453] + Xorg_xkbcomp_jll v1.4.2+4
  [33bec58e] + Xorg_xkeyboard_config_jll v2.27.0+4
  [c5fb5394] + Xorg_xtrans_jll v1.4.0+3
  [3161d3a3] + Zstd_jll v1.5.2+0
⌅ [214eeab7] + fzf_jll v0.29.0+0
  [a4ae2306] + libaom_jll v3.4.0+0
  [0ac62f75] + libass_jll v0.15.1+0
  [f638f0a6] + libfdk_aac_jll v2.0.2+0
  [b53b4c65] + libpng_jll v1.6.38+0
  [f27f6e37] + libvorbis_jll v1.3.7+1
  [1270edf5] + x264_jll v2021.5.5+0
  [dfaa095f] + x265_jll v3.5.0+0
  [d8fb68d0] + xkbcommon_jll v1.4.1+0
  [8bb1440f] + DelimitedFiles
  [efcefdf7] + PCRE2_jll v10.40.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
Precompiling project...
  ✓ LaTeXStrings
  ✓ StatsAPI
  ✓ TensorCore
  ✓ Contour
  ✓ Pipe
  ✓ Measures
  ✓ Grisu
  ✓ FixedPointNumbers
  ✓ OrderedCollections
  ✓ Unzip
  ✓ IniFile
  ✓ MacroTools
  ✓ URIs
  ✓ SimpleBufferStream
  ✓ Formatting
  ✓ PCRE2_jll
  ✓ UnicodeFun
  ✓ NaNMath
  ✓ DataAPI
  ✓ BitFlags
  ✓ TranscodingStreams
  ✓ Scratch
  ✓ LoggingExtras
  ✓ OpenSSL_jll
  ✓ Graphite2_jll
  ✓ Libmount_jll
  ✓ Bzip2_jll
  ✓ RecipesBase
  ✓ Xorg_libXau_jll
  ✓ libpng_jll
  ✓ LAME_jll
  ✓ libfdk_aac_jll
  ✓ Pixman_jll
  ✓ LERC_jll
  ✓ fzf_jll
  ✓ Ogg_jll
  ✓ JpegTurbo_jll
  ✓ Xorg_libXdmcp_jll
  ✓ x265_jll
  ✓ x264_jll
  ✓ libaom_jll
  ✓ Zstd_jll
  ✓ Expat_jll
  ✓ LZO_jll
  ✓ Opus_jll
  ✓ Xorg_xtrans_jll
  ✓ Libffi_jll
  ✓ Libiconv_jll
  ✓ Libgpg_error_jll
  ✓ Xorg_libpthread_stubs_jll
  ✓ Wayland_protocols_jll
  ✓ FriBidi_jll
  ✓ Libuuid_jll
  ✓ Showoff
  ✓ Latexify
  ✓ ColorTypes
  ✓ DataStructures
  ✓ RelocatableFolders
  ✓ Missings
  ✓ CodecZlib
  ✓ FreeType2_jll
  ✓ JLFzf
  ✓ libvorbis_jll
  ✓ Libtiff_jll
  ✓ OpenSSL
  ✓ XML2_jll
  ✓ Libgcrypt_jll
  ✓ SortingAlgorithms
  ✓ Fontconfig_jll
  ✓ ColorVectorSpace
  ✓ Gettext_jll
  ✓ Wayland_jll
  ✓ XSLT_jll
  ✓ HTTP
  ✓ Colors
  ✓ Glib_jll
  ✓ Xorg_libxcb_jll
  ✓ Xorg_xcb_util_jll
  ✓ Xorg_libX11_jll
  ✓ Xorg_xcb_util_image_jll
  ✓ StatsBase
  ✓ Xorg_xcb_util_keysyms_jll
  ✓ Xorg_xcb_util_renderutil_jll
  ✓ Xorg_xcb_util_wm_jll
  ✓ Xorg_libXrender_jll
  ✓ Xorg_libXext_jll
  ✓ Xorg_libXfixes_jll
  ✓ Xorg_libxkbfile_jll
  ✓ Xorg_libXinerama_jll
  ✓ Libglvnd_jll
  ✓ Xorg_libXrandr_jll
  ✓ Cairo_jll
  ✓ Xorg_libXi_jll
  ✓ Xorg_libXcursor_jll
  ✓ Xorg_xkbcomp_jll
  ✓ HarfBuzz_jll
  ✓ Xorg_xkeyboard_config_jll
  ✓ libass_jll
  ✓ xkbcommon_jll
  ✗ GLFW_jll
  ✓ FFMPEG_jll
  ✓ FFMPEG
  ✓ ColorSchemes
  ✗ Qt5Base_jll
  ✗ GR_jll
  ✓ PlotUtils
  ✓ GR
  ✓ RecipesPipeline
  ✓ PlotThemes
  ✗ Plots
  106 dependencies successfully precompiled in 74 seconds. 46 already precompiled.
  4 dependencies errored. To see a full report either run `import Pkg; Pkg.precompile()` or load the packages

Precompile() gives

  ✗ GLFW_jll
  ✗ Qt5Base_jll
  ✗ GR_jll
  ✗ Plots
  0 dependencies successfully precompiled in 14 seconds. 152 already precompiled.

The following 1 direct dependency failed to precompile:

Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80]

Failed to precompile Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80] to /root/.julia/compiled/v1.8/Plots/jl_YWotGW.
ERROR: LoadError: InitError: UndefVarError: GR_jll not defined
Stacktrace:
  [1] __init__()
    @ GR.GRPreferences ~/.julia/packages/GR/I1aTM/src/preferences.jl:50
  [2] _include_from_serialized(pkg::Base.PkgId, path::String, depmods::Vector{Any})
    @ Base ./loading.jl:831
  [3] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt64)
    @ Base ./loading.jl:1039
  [4] _require(pkg::Base.PkgId)
    @ Base ./loading.jl:1315
  [5] _require_prelocked(uuidkey::Base.PkgId)
    @ Base ./loading.jl:1200
  [6] macro expansion
    @ ./loading.jl:1180 [inlined]
  [7] macro expansion
    @ ./lock.jl:223 [inlined]
  [8] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1144
  [9] top-level scope
    @ ~/.julia/packages/Plots/nuwp4/src/backends.jl:395
 [10] eval
    @ ./boot.jl:368 [inlined]
 [11] _initialize_backend(pkg::Plots.GRBackend)
    @ Plots ~/.julia/packages/Plots/nuwp4/src/backends.jl:394
 [12] backend(pkg::Plots.GRBackend)
    @ Plots ~/.julia/packages/Plots/nuwp4/src/backends.jl:260
 [13] backend(sym::Symbol)
    @ Plots ~/.julia/packages/Plots/nuwp4/src/backends.jl:270
 [14] load_default_backend()
    @ Plots ~/.julia/packages/Plots/nuwp4/src/backends.jl:201
 [15] backend()
    @ Plots ~/.julia/packages/Plots/nuwp4/src/backends.jl:248
 [16] top-level scope
    @ ~/.julia/packages/Plots/nuwp4/src/init.jl:123
 [17] include(mod::Module, _path::String)
    @ Base ./Base.jl:419
 [18] include(x::String)
    @ Plots ~/.julia/packages/Plots/nuwp4/src/Plots.jl:1
 [19] top-level scope
    @ ~/.julia/packages/Plots/nuwp4/src/Plots.jl:176
 [20] include
    @ ./Base.jl:419 [inlined]
 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::Nothing)
    @ Base ./loading.jl:1554
 [22] top-level scope
    @ stdin:1
during initialization of module GRPreferences
in expression starting at /root/.julia/packages/Plots/nuwp4/src/init.jl:123
in expression starting at /root/.julia/packages/Plots/nuwp4/src/Plots.jl:1
in expression starting at stdin:1

Stacktrace:
 [1] pkgerror(msg::String)
   @ Pkg.Types /usr/local/share/julia/stdlib/v1.8/Pkg/src/Types.jl:67
 [2] precompile(ctx::Pkg.Types.Context, pkgs::Vector{String}; internal_call::Bool, strict::Bool, warn_loaded::Bool, already_instantiated::Bool, kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
   @ Pkg.API /usr/local/share/julia/stdlib/v1.8/Pkg/src/API.jl:1432
 [3] precompile
   @ /usr/local/share/julia/stdlib/v1.8/Pkg/src/API.jl:1063 [inlined]
 [4] #precompile#225
   @ /usr/local/share/julia/stdlib/v1.8/Pkg/src/API.jl:1062 [inlined]
 [5] precompile (repeats 2 times)
   @ /usr/local/share/julia/stdlib/v1.8/Pkg/src/API.jl:1062 [inlined]
 [6] top-level scope
   @ In[3]:1

https://colab.research.google.com/drive/1RLc2DAnQ0pRguGasg2-nSmdRbsbLNYeb?usp=sharing#scrollTo=XCxDP0hEOk_t

Details

Backends

Plots.jl version: v1.38.2
Backend version (]st -m <backend(s)>):
Output of versioninfo():

Julia Version 1.8.2
Commit 36034abf260 (2022-09-29 15:21 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
  CPU: 2 × Intel(R) Xeon(R) CPU @ 2.20GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, broadwell)
  Threads: 2 on 2 virtual cores
Environment:
  LD_LIBRARY_PATH = /usr/lib64-nvidia
  LD_PRELOAD = /usr/lib/x86_64-linux-gnu/libtcmalloc.so.4
  JULIA_NUM_THREADS = 2
@Snimm Snimm added the bug label Jan 16, 2023
@t-bltg
Copy link
Member

t-bltg commented Mar 8, 2023

This platform has unfortunately never been supported, so there is nothing we can do in Plots here.

@t-bltg t-bltg added the upstream julia or dependencies label Mar 8, 2023
@t-bltg t-bltg closed this as not planned Won't fix, can't repro, duplicate, stale Mar 8, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
bug upstream julia or dependencies
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@t-bltg @Snimm