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1.5.0-DEV-6a9a92683d.log
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Julia Version 1.5.0-DEV.299
Commit 6a9a92683d (2020-02-20 07:47 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed ProgressMeter ─ v0.9.0
Installed Distances ───── v0.8.2
Installed TSne ────────── v1.2.0
Updating `~/.julia/environments/v1.5/Project.toml`
[24678dba] + TSne v1.2.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
[b4f34e82] + Distances v0.8.2
[92933f4c] + ProgressMeter v0.9.0
[24678dba] + TSne v1.2.0
[2a0f44e3] + Base64
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[de0858da] + Printf
[9a3f8284] + Random
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[4ec0a83e] + Unicode
┌ Warning: using test/REQUIRE files is deprecated and current support is lacking in some areas
└ @ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1413
Testing TSne
#=#=# ############# 19.3%######################################################################## 100.0%
#=#=# ######################################################################## 100.0%
#=#=# ##### 7.1%############## 20.3%########################### 37.6%########################################## 58.5%############################################################## 86.8%######################################################################## 100.0%
Status `/tmp/jl_gH4Ygu/Manifest.toml`
[9e28174c] BinDeps v1.0.0
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.24
[324d7699] CategoricalArrays v0.7.7
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.9.1
[34da2185] Compat v3.5.0
[9a962f9c] DataAPI v1.1.0
[124859b0] DataDeps v0.7.1
[a93c6f00] DataFrames v0.20.2
[864edb3b] DataStructures v0.17.9
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[e2ba6199] ExprTools v0.1.0
[8f5d6c58] EzXML v1.1.0
[5789e2e9] FileIO v1.2.2
[48062228] FilePathsBase v0.7.0
[53c48c17] FixedPointNumbers v0.7.1
[92fee26a] GZip v0.5.1
[cd3eb016] HTTP v0.8.8
[83e8ac13] IniFile v0.5.0
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[94ce4f54] Libiconv_jll v1.16.0+1
[eb30cadb] MLDatasets v0.4.0
[739be429] MbedTLS v0.7.0
[e1d29d7a] Missings v0.4.3
[78c3b35d] Mocking v0.7.1
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.11
[2dfb63ee] PooledArrays v0.5.3
[92933f4c] ProgressMeter v0.9.0
[df47a6cb] RData v0.6.3
[ce6b1742] RDatasets v0.6.6
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[a2af1166] SortingAlgorithms v0.3.1
[24678dba] TSne v1.2.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.0.1
[f269a46b] TimeZones v1.0.1
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.0
[ea10d353] WeakRefStrings v0.6.2
[02c8fc9c] XML2_jll v2.9.9+1
[83775a58] Zlib_jll v1.2.11+8
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
[ Info: Initial X shape is (150, 4)
[ Info: Starting with random layout...
[ Info: Computing pairwise distances...
┌ Warning: implicit `dims=2` argument now has to be passed explicitly to specify that distances between columns should be computed
│ caller = ip:0x0
└ @ Core :-1
[ Info: Mean σ=0.1908
[ Info: Final t-SNE KL-divergence=3.5567
[ Info: Initial X shape is (150, 4)
[ Info: Starting with random layout...
[ Info: Computing pairwise distances...
[ Info: Mean σ=0.1908
[ Info: Final t-SNE KL-divergence=3.6037
Computing point perplexities 2%|▌ | ETA: 0:00:05[KComputing point perplexities 7%|█▌ | ETA: 0:00:07[KComputing point perplexities 8%|█▉ | ETA: 0:00:06[KComputing point perplexities 10%|██▎ | ETA: 0:00:06[KComputing point perplexities 12%|██▊ | ETA: 0:00:06[KComputing point perplexities 13%|███ | ETA: 0:00:06[KComputing point perplexities 15%|███▍ | ETA: 0:00:06[KComputing point perplexities 16%|███▊ | ETA: 0:00:05[KComputing point perplexities 18%|████▏ | ETA: 0:00:05[KComputing point perplexities 20%|████▋ | ETA: 0:00:05[KComputing point perplexities 22%|█████ | ETA: 0:00:05[KComputing point perplexities 23%|█████▍ | ETA: 0:00:05[KComputing point perplexities 25%|█████▊ | ETA: 0:00:05[KComputing point perplexities 27%|██████▏ | ETA: 0:00:05[KComputing point perplexities 29%|██████▋ | ETA: 0:00:04[KComputing point perplexities 31%|███████▏ | ETA: 0:00:04[KComputing point perplexities 33%|███████▌ | ETA: 0:00:04[KComputing point perplexities 34%|███████▉ | ETA: 0:00:04[KComputing point perplexities 36%|████████▎ | ETA: 0:00:04[KComputing point perplexities 38%|████████▋ | ETA: 0:00:04[KComputing point perplexities 40%|█████████▏ | ETA: 0:00:04[KComputing point perplexities 42%|█████████▋ | ETA: 0:00:04[KComputing point perplexities 44%|██████████ | ETA: 0:00:03[KComputing point perplexities 45%|██████████▍ | ETA: 0:00:03[KComputing point perplexities 46%|██████████▋ | ETA: 0:00:03[KComputing point perplexities 48%|███████████ | ETA: 0:00:03[KComputing point perplexities 50%|███████████▌ | ETA: 0:00:03[KComputing point perplexities 52%|████████████ | ETA: 0:00:03[KComputing point perplexities 54%|████████████▍ | ETA: 0:00:03[KComputing point perplexities 56%|████████████▊ | ETA: 0:00:03[KComputing point perplexities 57%|█████████████▎ | ETA: 0:00:03[KComputing point perplexities 59%|█████████████▋ | ETA: 0:00:02[KComputing point perplexities 60%|█████████████▉ | ETA: 0:00:02[KComputing point perplexities 62%|██████████████▎ | ETA: 0:00:02[KComputing point perplexities 64%|██████████████▋ | ETA: 0:00:02[KComputing point perplexities 66%|███████████████▏ | ETA: 0:00:02[KComputing point perplexities 67%|███████████████▌ | ETA: 0:00:02[KComputing point perplexities 69%|███████████████▉ | ETA: 0:00:02[KComputing point perplexities 71%|████████████████▍ | ETA: 0:00:02[KComputing point perplexities 73%|████████████████▊ | ETA: 0:00:02[KComputing point perplexities 74%|█████████████████▏ | ETA: 0:00:02[KComputing point perplexities 76%|█████████████████▌ | ETA: 0:00:01[KComputing point perplexities 78%|█████████████████▉ | ETA: 0:00:01[KComputing point perplexities 79%|██████████████████▎ | ETA: 0:00:01[KComputing point perplexities 81%|██████████████████▊ | ETA: 0:00:01[KComputing point perplexities 83%|███████████████████▏ | ETA: 0:00:01[KComputing point perplexities 85%|███████████████████▋ | ETA: 0:00:01[KComputing point perplexities 87%|████████████████████ | ETA: 0:00:01[KComputing point perplexities 88%|████████████████████▍ | ETA: 0:00:01[KComputing point perplexities 90%|████████████████████▊ | ETA: 0:00:01[KComputing point perplexities 92%|█████████████████████▏ | ETA: 0:00:00[KComputing point perplexities 94%|█████████████████████▌ | ETA: 0:00:00[KComputing point perplexities 96%|██████████████████████ | ETA: 0:00:00[KComputing point perplexities 97%|██████████████████████▍| ETA: 0:00:00[KComputing point perplexities 99%|██████████████████████▊| ETA: 0:00:00[KComputing point perplexities100%|███████████████████████| Time: 0:00:06[K
Computing t-SNE 0%| | ETA: 0:19:49[K
KL_divergence: 0.2455 (warmup)[A
[K[AComputing t-SNE 0%| | ETA: 0:12:02[K
KL_divergence: 0.2455 (warmup)[A
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KL_divergence: 0.2455 (warmup)[A
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KL_divergence: 0.2455 (warmup)[A
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[K[AComputing t-SNE 19%|██████▉ | ETA: 0:07:14[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|███████ | ETA: 0:07:14[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|███████ | ETA: 0:07:13[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|███████ | ETA: 0:07:13[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|███████ | ETA: 0:07:12[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████ | ETA: 0:07:12[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████ | ETA: 0:07:11[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████ | ETA: 0:07:11[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:10[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:10[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:10[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:10[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:09[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:09[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:08[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:09[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:08[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:07[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:07[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:07[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:07[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:06[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▍ | ETA: 0:07:06[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▍ | ETA: 0:07:06[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▍ | ETA: 0:07:05[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▍ | ETA: 0:07:05[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▍ | ETA: 0:07:04[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▍ | ETA: 0:07:04[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▍ | ETA: 0:07:03[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:03[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:03[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:03[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:03[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:03[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:03[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:02[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▋ | ETA: 0:07:02[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▋ | ETA: 0:07:01[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▋ | ETA: 0:07:01[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▋ | ETA: 0:07:01[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▋ | ETA: 0:07:00[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▋ | ETA: 0:07:00[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▋ | ETA: 0:07:00[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▊ | ETA: 0:07:00[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▊ | ETA: 0:06:59[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 22%|███████▊ | ETA: 0:06:59[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 22%|███████▊ | ETA: 0:06:59[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 22%|███████▊ | ETA: 0:06:59[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 22%|███████▊ | ETA: 0:06:59[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 22%|███████▊ | ETA: 0:06:58[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 22%|███████▉ | ETA: 0:06:58[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 22%|███████▉ | ETA: 0:06:58[K
KL_divergence: 0.0000[A