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1.5.0-DEV-f5afdf9080.log
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Julia Version 1.5.0-DEV.295
Commit f5afdf9080 (2020-02-19 18:51 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed PooledArrays ──────────────── v0.5.3
Installed SoftGlobalScope ───────────── v1.0.10
Installed ElasticPDMats ─────────────── v0.2.1
Installed MultivariateStats ─────────── v0.7.0
Installed NNlib ─────────────────────── v0.6.4
Installed CombineML ─────────────────── v1.3.0
Installed TimeZones ─────────────────── v1.0.1
Installed PositiveFactorizations ────── v0.2.3
Installed Zlib_jll ──────────────────── v1.2.11+8
Installed FiniteDiff ────────────────── v2.2.1
Installed Mocking ───────────────────── v0.7.1
Installed DiffRules ─────────────────── v1.0.1
Installed ForwardDiff ───────────────── v0.10.9
Installed ColorTypes ────────────────── v0.9.1
Installed LaTeXStrings ──────────────── v1.0.3
Installed ElasticArrays ─────────────── v1.0.0
Installed NLSolversBase ─────────────── v7.6.1
Installed Colors ────────────────────── v0.11.2
Installed ProgressMeter ─────────────── v1.2.0
Installed MKL_jll ───────────────────── v2019.0.117+2
Installed PDMats ────────────────────── v0.9.11
Installed Rmath ─────────────────────── v0.6.0
Installed GaussianMixtures ──────────── v0.3.1
Installed FilePathsBase ─────────────── v0.7.0
Installed DecisionTree ──────────────── v0.10.1
Installed ExprTools ─────────────────── v0.1.0
Installed ScikitLearnBase ───────────── v0.5.0
Installed OpenSpecFun_jll ───────────── v0.5.3+1
Installed DiffResults ───────────────── v1.0.2
Installed Arpack ────────────────────── v0.4.0
Installed PyCall ────────────────────── v1.91.3
Installed OrderedCollections ────────── v1.1.0
Installed JSON ──────────────────────── v0.21.0
Installed CSV ───────────────────────── v0.5.24
Installed Reexport ──────────────────── v0.2.0
Installed Arpack_jll ────────────────── v3.5.0+2
Installed FFTW ──────────────────────── v1.2.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed LineSearches ──────────────── v7.0.1
Installed QuadGK ────────────────────── v2.3.1
Installed NBInclude ─────────────────── v2.2.0
Installed XML2_jll ──────────────────── v2.9.9+1
Installed TranscodingStreams ────────── v0.9.5
Installed FFTW_jll ──────────────────── v3.3.9+3
Installed Missings ──────────────────── v0.4.3
Installed Requires ──────────────────── v1.0.1
Installed VersionParsing ────────────── v1.2.0
Installed FixedPointNumbers ─────────── v0.7.1
Installed Tables ────────────────────── v1.0.1
Installed StatsBase ─────────────────── v0.32.1
Installed StatsFuns ─────────────────── v0.9.4
Installed CodecZlib ─────────────────── v0.6.0
Installed AbstractFFTs ──────────────── v0.5.0
Installed FillArrays ────────────────── v0.8.4
Installed TableTraits ───────────────── v1.0.0
Installed FileIO ────────────────────── v1.2.2
Installed RData ─────────────────────── v0.7.1
Installed DataFrames ────────────────── v0.20.2
Installed Distributions ─────────────── v0.22.4
Installed Parsers ───────────────────── v0.3.11
Installed Conda ─────────────────────── v1.4.1
Installed WinReg ────────────────────── v0.3.1
Installed RecipesBase ───────────────── v0.8.0
Installed ScikitLearn ───────────────── v0.5.1
Installed Clustering ────────────────── v0.13.3
Installed IRTools ───────────────────── v0.3.1
Installed ArrayInterface ────────────── v2.4.1
Installed Parameters ────────────────── v0.12.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed BinaryProvider ────────────── v0.5.8
Installed OpenBLAS_jll ──────────────── v0.3.7+5
Installed ZygoteRules ───────────────── v0.2.0
Installed JLD2 ──────────────────────── v0.1.11
Installed StaticArrays ──────────────── v0.12.1
Installed Optim ─────────────────────── v0.20.1
Installed PyPlot ────────────────────── v2.8.2
Installed InvertedIndices ───────────── v1.0.0
Installed NaNMath ───────────────────── v0.3.3
Installed StatsModels ───────────────── v0.6.6
Installed EzXML ─────────────────────── v1.1.0
Installed MLBase ────────────────────── v0.8.0
Installed Zygote ────────────────────── v0.4.7
Installed GaussianProcesses ─────────── v0.11.2
Installed Documenter ────────────────── v0.24.5
Installed DataAPI ───────────────────── v1.1.0
Installed WeakRefStrings ────────────── v0.6.2
Installed Distances ─────────────────── v0.8.2
Installed Compat ────────────────────── v2.2.0
Installed NearestNeighbors ──────────── v0.4.4
Installed CommonSubexpressions ──────── v0.2.0
Installed FastGaussQuadrature ───────── v0.4.2
Installed DataStructures ────────────── v0.17.9
Installed RCall ─────────────────────── v0.13.4
Installed MacroTools ────────────────── v0.5.4
Installed IntelOpenMP_jll ───────────── v2018.0.3+0
Installed DataValueInterfaces ───────── v1.0.0
Installed SpecialFunctions ──────────── v0.10.0
Installed DocStringExtensions ───────── v0.8.1
Installed Libiconv_jll ──────────────── v1.16.0+1
Installed ShiftedArrays ─────────────── v1.0.0
Installed IterTools ─────────────────── v1.3.0
Installed CategoricalArrays ─────────── v0.7.7
Installed RDatasets ─────────────────── v0.6.1
#=#=# ##O#- # ##O=# # ######################################################################## 100.0%
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Updating `~/.julia/environments/v1.5/Project.toml`
[f3117721] + CombineML v1.3.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
[621f4979] + AbstractFFTs v0.5.0
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+2
[4fba245c] + ArrayInterface v2.4.1
[b99e7846] + BinaryProvider v0.5.8
[336ed68f] + CSV v0.5.24
[324d7699] + CategoricalArrays v0.7.7
[aaaa29a8] + Clustering v0.13.3
[944b1d66] + CodecZlib v0.6.0
[3da002f7] + ColorTypes v0.9.1
[5ae59095] + Colors v0.11.2
[f3117721] + CombineML v1.3.0
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.4.1
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.20.2
[864edb3b] + DataStructures v0.17.9
[e2d170a0] + DataValueInterfaces v1.0.0
[7806a523] + DecisionTree v0.10.1
[163ba53b] + DiffResults v1.0.2
[b552c78f] + DiffRules v1.0.1
[b4f34e82] + Distances v0.8.2
[31c24e10] + Distributions v0.22.4
[ffbed154] + DocStringExtensions v0.8.1
[e30172f5] + Documenter v0.24.5
[fdbdab4c] + ElasticArrays v1.0.0
[2904ab23] + ElasticPDMats v0.2.1
[e2ba6199] + ExprTools v0.1.0
[8f5d6c58] + EzXML v1.1.0
[7a1cc6ca] + FFTW v1.2.0
[f5851436] + FFTW_jll v3.3.9+3
[442a2c76] + FastGaussQuadrature v0.4.2
[5789e2e9] + FileIO v1.2.2
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.4
[6a86dc24] + FiniteDiff v2.2.1
[53c48c17] + FixedPointNumbers v0.7.1
[f6369f11] + ForwardDiff v0.10.9
[cc18c42c] + GaussianMixtures v0.3.1
[891a1506] + GaussianProcesses v0.11.2
[7869d1d1] + IRTools v0.3.1
[1d5cc7b8] + IntelOpenMP_jll v2018.0.3+0
[41ab1584] + InvertedIndices v1.0.0
[c8e1da08] + IterTools v1.3.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[033835bb] + JLD2 v0.1.11
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.0.3
[94ce4f54] + Libiconv_jll v1.16.0+1
[d3d80556] + LineSearches v7.0.1
[856f044c] + MKL_jll v2019.0.117+2
[f0e99cf1] + MLBase v0.8.0
[1914dd2f] + MacroTools v0.5.4
[e1d29d7a] + Missings v0.4.3
[78c3b35d] + Mocking v0.7.1
[6f286f6a] + MultivariateStats v0.7.0
[0db19996] + NBInclude v2.2.0
[d41bc354] + NLSolversBase v7.6.1
[872c559c] + NNlib v0.6.4
[77ba4419] + NaNMath v0.3.3
[b8a86587] + NearestNeighbors v0.4.4
[4536629a] + OpenBLAS_jll v0.3.7+5
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[429524aa] + Optim v0.20.1
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.11
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.11
[2dfb63ee] + PooledArrays v0.5.3
[85a6dd25] + PositiveFactorizations v0.2.3
[92933f4c] + ProgressMeter v1.2.0
[438e738f] + PyCall v1.91.3
[d330b81b] + PyPlot v2.8.2
[1fd47b50] + QuadGK v2.3.1
[6f49c342] + RCall v0.13.4
[df47a6cb] + RData v0.7.1
[ce6b1742] + RDatasets v0.6.1
[3cdcf5f2] + RecipesBase v0.8.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.1
[79098fc4] + Rmath v0.6.0
[3646fa90] + ScikitLearn v0.5.1
[6e75b9c4] + ScikitLearnBase v0.5.0
[1277b4bf] + ShiftedArrays v1.0.0
[b85f4697] + SoftGlobalScope v1.0.10
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.10.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.1
[4c63d2b9] + StatsFuns v0.9.4
[3eaba693] + StatsModels v0.6.6
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.0.1
[f269a46b] + TimeZones v1.0.1
[3bb67fe8] + TranscodingStreams v0.9.5
[81def892] + VersionParsing v1.2.0
[ea10d353] + WeakRefStrings v0.6.2
[1b915085] + WinReg v0.3.1
[02c8fc9c] + XML2_jll v2.9.9+1
[83775a58] + Zlib_jll v1.2.11+8
[e88e6eb3] + Zygote v0.4.7
[700de1a5] + ZygoteRules v0.2.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda ────→ `~/.julia/packages/Conda/3rPhK/deps/build.log`
Building Rmath ────→ `~/.julia/packages/Rmath/BoBag/deps/build.log`
Building NNlib ────→ `~/.julia/packages/NNlib/3krvM/deps/build.log`
Building FFTW ─────→ `~/.julia/packages/FFTW/qqcBj/deps/build.log`
Building PyCall ───→ `~/.julia/packages/PyCall/kAhnQ/deps/build.log`
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Building TimeZones → `~/.julia/packages/TimeZones/zymSN/deps/build.log`
Building RCall ────→ `~/.julia/packages/RCall/g7dhB/deps/build.log`
Building CombineML → `~/.julia/packages/CombineML/aagQT/deps/build.log`
Testing CombineML
Status `/tmp/jl_sqC3Ev/Manifest.toml`
[621f4979] AbstractFFTs v0.5.0
[7d9fca2a] Arpack v0.4.0
[68821587] Arpack_jll v3.5.0+2
[4fba245c] ArrayInterface v2.4.1
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.24
[324d7699] CategoricalArrays v0.7.7
[aaaa29a8] Clustering v0.13.3
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.9.1
[5ae59095] Colors v0.11.2
[f3117721] CombineML v1.3.0
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.4.1
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.20.2
[864edb3b] DataStructures v0.17.9
[e2d170a0] DataValueInterfaces v1.0.0
[7806a523] DecisionTree v0.10.1
[163ba53b] DiffResults v1.0.2
[b552c78f] DiffRules v1.0.1
[b4f34e82] Distances v0.8.2
[31c24e10] Distributions v0.22.4
[ffbed154] DocStringExtensions v0.8.1
[e30172f5] Documenter v0.24.5
[fdbdab4c] ElasticArrays v1.0.0
[2904ab23] ElasticPDMats v0.2.1
[e2ba6199] ExprTools v0.1.0
[8f5d6c58] EzXML v1.1.0
[7a1cc6ca] FFTW v1.2.0
[f5851436] FFTW_jll v3.3.9+3
[442a2c76] FastGaussQuadrature v0.4.2
[5789e2e9] FileIO v1.2.2
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.4
[6a86dc24] FiniteDiff v2.2.1
[53c48c17] FixedPointNumbers v0.7.1
[f6369f11] ForwardDiff v0.10.9
[cc18c42c] GaussianMixtures v0.3.1
[891a1506] GaussianProcesses v0.11.2
[7869d1d1] IRTools v0.3.1
[1d5cc7b8] IntelOpenMP_jll v2018.0.3+0
[41ab1584] InvertedIndices v1.0.0
[c8e1da08] IterTools v1.3.0
[82899510] IteratorInterfaceExtensions v1.0.0
[033835bb] JLD2 v0.1.11
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.0.3
[94ce4f54] Libiconv_jll v1.16.0+1
[d3d80556] LineSearches v7.0.1
[856f044c] MKL_jll v2019.0.117+2
[f0e99cf1] MLBase v0.8.0
[1914dd2f] MacroTools v0.5.4
[e1d29d7a] Missings v0.4.3
[78c3b35d] Mocking v0.7.1
[6f286f6a] MultivariateStats v0.7.0
[0db19996] NBInclude v2.2.0
[d41bc354] NLSolversBase v7.6.1
[872c559c] NNlib v0.6.4
[77ba4419] NaNMath v0.3.3
[b8a86587] NearestNeighbors v0.4.4
[4536629a] OpenBLAS_jll v0.3.7+5
[efe28fd5] OpenSpecFun_jll v0.5.3+1
[429524aa] Optim v0.20.1
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.11
[d96e819e] Parameters v0.12.0
[69de0a69] Parsers v0.3.11
[2dfb63ee] PooledArrays v0.5.3
[85a6dd25] PositiveFactorizations v0.2.3
[92933f4c] ProgressMeter v1.2.0
[438e738f] PyCall v1.91.3
[d330b81b] PyPlot v2.8.2
[1fd47b50] QuadGK v2.3.1
[6f49c342] RCall v0.13.4
[df47a6cb] RData v0.7.1
[ce6b1742] RDatasets v0.6.1
[3cdcf5f2] RecipesBase v0.8.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[79098fc4] Rmath v0.6.0
[3646fa90] ScikitLearn v0.5.1
[6e75b9c4] ScikitLearnBase v0.5.0
[1277b4bf] ShiftedArrays v1.0.0
[b85f4697] SoftGlobalScope v1.0.10
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.1
[4c63d2b9] StatsFuns v0.9.4
[3eaba693] StatsModels v0.6.6
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.0.1
[f269a46b] TimeZones v1.0.1
[3bb67fe8] TranscodingStreams v0.9.5
[81def892] VersionParsing v1.2.0
[ea10d353] WeakRefStrings v0.6.2
[1b915085] WinReg v0.3.1
[02c8fc9c] XML2_jll v2.9.9+1
[83775a58] Zlib_jll v1.2.11+8
[e88e6eb3] Zygote v0.4.7
[700de1a5] ZygoteRules v0.2.0
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
[ Info: scikitlearn not available
[ Info: caret not available
Test Summary: | Pass Total
CombineML util functions | 15 15
Test Summary: | Pass Total
CombineML transformers | 3 3
RandomForest gives same results as its backend: Test Failed at /home/pkgeval/.julia/packages/CombineML/aagQT/test/julia/test_decisiontree.jl:51
Expression: combineml_predictions == original_predictions
Evaluated: ["a", "a", "b", "b", "a", "a", "d", "d"] == ["c", "c", "b", "b", "c", "c", "d", "d"]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/CombineML/aagQT/test/julia/test_decisiontree.jl:51
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1114
[3] top-level scope at /home/pkgeval/.julia/packages/CombineML/aagQT/test/julia/test_decisiontree.jl:37
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1114
[5] top-level scope at /home/pkgeval/.julia/packages/CombineML/aagQT/test/julia/test_decisiontree.jl:14
Test Summary: | Pass Fail Total
DecisionTree learners | 3 1 4
PrunedTree gives same results as its backend | 1 1
RandomForest gives same results as its backend | 1 1
DecisionStumpAdaboost gives same results as its backend | 1 1
RandomForest handles training-dependent options | 1 1
ERROR: LoadError: LoadError: Some tests did not pass: 3 passed, 1 failed, 0 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/CombineML/aagQT/test/julia/test_decisiontree.jl:12
in expression starting at /home/pkgeval/.julia/packages/CombineML/aagQT/test/runtests.jl:9
ERROR: Package CombineML errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:53
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1503
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:316
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:303
[5] #test#68 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[6] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[7] #test#67 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[8] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[10] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[11] top-level scope at none:13